Mercurial > repos > cpt > cpt_gff_rebase

annotate test-data/T7_TMHMM.gff3 @ 1:4f4b413056f6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author cpt
date Mon, 05 Jun 2023 02:44:12 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
1 ##gff-version 3
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
2 T7p04 feature Chain 2 47 . + . Description=Transmembrane protein;ID=tmhmm_tmd_1-0e35f4c8-7d2d-457e-bf36-a121fcede87d;Note=Transmembrane protein - N out C in;Target=T7p04
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
3 T7p04 TMHMM Topological domain 1 22 . + . Note=Extracellular;Parent=tmhmm_tmd_1-0e35f4c8-7d2d-457e-bf36-a121fcede87d
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
4 T7p04 TMHMM Transmembrane 23 45 . + . Note=Helical;Parent=tmhmm_tmd_1-0e35f4c8-7d2d-457e-bf36-a121fcede87d
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
5 T7p04 TMHMM Topological domain 46 47 . + . Note=Cytoplasmic;Parent=tmhmm_tmd_1-0e35f4c8-7d2d-457e-bf36-a121fcede87d
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
6 ##gff-version 3
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
7 T7p11 feature Chain 2 51 . + . Description=Transmembrane protein;ID=tmhmm_tmd_2-f3395d64-94df-47d0-b5cd-b098a8fc57fc;Note=Transmembrane protein - N in C in;Target=T7p11
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
8 T7p11 TMHMM Topological domain 1 4 . + . Note=Cytoplasmic;Parent=tmhmm_tmd_2-f3395d64-94df-47d0-b5cd-b098a8fc57fc
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
9 T7p11 TMHMM Transmembrane 5 24 . + . Note=Helical;Parent=tmhmm_tmd_2-f3395d64-94df-47d0-b5cd-b098a8fc57fc
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
10 T7p11 TMHMM Topological domain 25 27 . + . Note=Extracellular;Parent=tmhmm_tmd_2-f3395d64-94df-47d0-b5cd-b098a8fc57fc
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
11 T7p11 TMHMM Transmembrane 28 50 . + . Note=Helical;Parent=tmhmm_tmd_2-f3395d64-94df-47d0-b5cd-b098a8fc57fc
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
12 T7p11 TMHMM Topological domain 51 51 . + . Note=Cytoplasmic;Parent=tmhmm_tmd_2-f3395d64-94df-47d0-b5cd-b098a8fc57fc
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
13 ##gff-version 3
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
14 T7p25 feature Chain 2 112 . + . Description=Transmembrane protein;ID=tmhmm_tmd_3-bc20f884-acf4-4cc9-a845-838c08833ba9;Note=Transmembrane protein - N in C in;Target=T7p25
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
15 T7p25 TMHMM Topological domain 1 6 . + . Note=Cytoplasmic;Parent=tmhmm_tmd_3-bc20f884-acf4-4cc9-a845-838c08833ba9
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
16 T7p25 TMHMM Transmembrane 7 29 . + . Note=Helical;Parent=tmhmm_tmd_3-bc20f884-acf4-4cc9-a845-838c08833ba9
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
17 T7p25 TMHMM Topological domain 30 33 . + . Note=Extracellular;Parent=tmhmm_tmd_3-bc20f884-acf4-4cc9-a845-838c08833ba9
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
18 T7p25 TMHMM Transmembrane 34 56 . + . Note=Helical;Parent=tmhmm_tmd_3-bc20f884-acf4-4cc9-a845-838c08833ba9
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
19 T7p25 TMHMM Topological domain 57 112 . + . Note=Cytoplasmic;Parent=tmhmm_tmd_3-bc20f884-acf4-4cc9-a845-838c08833ba9
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
20 ##gff-version 3
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
21 T7p36 feature Chain 2 37 . + . Description=Transmembrane protein;ID=tmhmm_tmd_4-4bb9c895-cf89-4510-b338-3e8027abfee8;Note=Transmembrane protein - N out C in;Target=T7p36
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
22 T7p36 TMHMM Topological domain 1 4 . + . Note=Extracellular;Parent=tmhmm_tmd_4-4bb9c895-cf89-4510-b338-3e8027abfee8
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
23 T7p36 TMHMM Transmembrane 5 24 . + . Note=Helical;Parent=tmhmm_tmd_4-4bb9c895-cf89-4510-b338-3e8027abfee8
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
24 T7p36 TMHMM Topological domain 25 37 . + . Note=Cytoplasmic;Parent=tmhmm_tmd_4-4bb9c895-cf89-4510-b338-3e8027abfee8
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
25 ##gff-version 3
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
26 T7p53 feature Chain 2 67 . + . Description=Transmembrane protein;ID=tmhmm_tmd_5-481eeec9-f604-43c0-a99b-3891bd8881bb;Note=Transmembrane protein - N out C in;Target=T7p53
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
27 T7p53 TMHMM Topological domain 1 36 . + . Note=Extracellular;Parent=tmhmm_tmd_5-481eeec9-f604-43c0-a99b-3891bd8881bb
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
28 T7p53 TMHMM Transmembrane 37 55 . + . Note=Helical;Parent=tmhmm_tmd_5-481eeec9-f604-43c0-a99b-3891bd8881bb
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
29 T7p53 TMHMM Topological domain 56 67 . + . Note=Cytoplasmic;Parent=tmhmm_tmd_5-481eeec9-f604-43c0-a99b-3891bd8881bb
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
30 ##gff-version 3
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
31 T7p56 feature Chain 2 83 . + . Description=Transmembrane protein;ID=tmhmm_tmd_6-32be98b3-e5bc-4ed2-b5ff-d031936e4a6e;Note=Transmembrane protein - N in C out;Target=T7p56
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
32 T7p56 TMHMM Topological domain 1 27 . + . Note=Cytoplasmic;Parent=tmhmm_tmd_6-32be98b3-e5bc-4ed2-b5ff-d031936e4a6e
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
33 T7p56 TMHMM Transmembrane 28 50 . + . Note=Helical;Parent=tmhmm_tmd_6-32be98b3-e5bc-4ed2-b5ff-d031936e4a6e
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
34 T7p56 TMHMM Topological domain 51 83 . + . Note=Extracellular;Parent=tmhmm_tmd_6-32be98b3-e5bc-4ed2-b5ff-d031936e4a6e
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
35 ##gff-version 3
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
36 T7p60 feature Chain 2 49 . + . Description=Transmembrane protein;ID=tmhmm_tmd_7-d18b863e-5930-430b-9a60-666e3a790599;Note=Transmembrane protein - N in C out;Target=T7p60
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
37 T7p60 TMHMM Topological domain 1 12 . + . Note=Cytoplasmic;Parent=tmhmm_tmd_7-d18b863e-5930-430b-9a60-666e3a790599
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
38 T7p60 TMHMM Transmembrane 13 30 . + . Note=Helical;Parent=tmhmm_tmd_7-d18b863e-5930-430b-9a60-666e3a790599
4f4b413056f6 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
39 T7p60 TMHMM Topological domain 31 49 . + . Note=Extracellular;Parent=tmhmm_tmd_7-d18b863e-5930-430b-9a60-666e3a790599