view cpt_lipop_conv/test-data/LipoToGFF_In.gff3 @ 0:adde21b6bdb3 draft

Uploaded
author cpt
date Fri, 13 May 2022 05:18:31 +0000
parents
children
line wrap: on
line source

##gff-version 3
##sequence-region testseq_2018-03-08 1 9216
testseq_2018-03-08	cpt.fixModel	gene	52	147	.	-	.	ID=ORF.0.472_0.8077298255
testseq_2018-03-08	cpt.fixModel	mRNA	52	147	.	-	.	ID=ORF.0.472_0.8077298255.mRNA;Parent=ORF.0.472_0.8077298255
testseq_2018-03-08	getOrfsOrCds	CDS	52	147	.	-	0	ID=ORF.0.472_0.8077298255.CDS;Parent=ORF.0.472_0.8077298255.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	160	162	.	-	.	ID=ORF.0.472_0.8077298255.rbs-0;Parent=ORF.0.472_0.8077298255
testseq_2018-03-08	cpt.fixModel	gene	154	339	.	-	.	ID=ORF.0.465_0.466377183402
testseq_2018-03-08	cpt.fixModel	mRNA	154	339	.	-	.	ID=ORF.0.465_0.466377183402.mRNA;Parent=ORF.0.465_0.466377183402
testseq_2018-03-08	getOrfsOrCds	CDS	154	339	.	-	0	ID=ORF.0.465_0.466377183402.CDS;Parent=ORF.0.465_0.466377183402.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	347	349	.	-	.	ID=ORF.0.465_0.466377183402.rbs-0;Parent=ORF.0.465_0.466377183402
testseq_2018-03-08	cpt.fixModel	gene	154	324	.	-	.	ID=ORF.0.466_0.685859290271
testseq_2018-03-08	cpt.fixModel	mRNA	154	324	.	-	.	ID=ORF.0.466_0.685859290271.mRNA;Parent=ORF.0.466_0.685859290271
testseq_2018-03-08	getOrfsOrCds	CDS	154	324	.	-	0	ID=ORF.0.466_0.685859290271.CDS;Parent=ORF.0.466_0.685859290271.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	335	337	.	-	.	ID=ORF.0.466_0.685859290271.rbs-0;Parent=ORF.0.466_0.685859290271
testseq_2018-03-08	cpt.fixModel	gene	154	297	.	-	.	ID=ORF.0.468_0.803001272192
testseq_2018-03-08	cpt.fixModel	mRNA	154	297	.	-	.	ID=ORF.0.468_0.803001272192.mRNA;Parent=ORF.0.468_0.803001272192
testseq_2018-03-08	getOrfsOrCds	CDS	154	297	.	-	0	ID=ORF.0.468_0.803001272192.CDS;Parent=ORF.0.468_0.803001272192.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	306	311	.	-	.	ID=ORF.0.468_0.803001272192.rbs-0;Parent=ORF.0.468_0.803001272192
testseq_2018-03-08	cpt.fixModel	gene	314	490	.	-	.	ID=ORF.0.708_0.889453606077
testseq_2018-03-08	cpt.fixModel	mRNA	314	490	.	-	.	ID=ORF.0.708_0.889453606077.mRNA;Parent=ORF.0.708_0.889453606077
testseq_2018-03-08	getOrfsOrCds	CDS	314	490	.	-	0	ID=ORF.0.708_0.889453606077.CDS;Parent=ORF.0.708_0.889453606077.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	500	502	.	-	.	ID=ORF.0.708_0.889453606077.rbs-0;Parent=ORF.0.708_0.889453606077
testseq_2018-03-08	cpt.fixModel	gene	487	672	.	-	.	ID=ORF.0.458_0.61399204562
testseq_2018-03-08	cpt.fixModel	mRNA	487	672	.	-	.	ID=ORF.0.458_0.61399204562.mRNA;Parent=ORF.0.458_0.61399204562
testseq_2018-03-08	getOrfsOrCds	CDS	487	672	.	-	0	ID=ORF.0.458_0.61399204562.CDS;Parent=ORF.0.458_0.61399204562.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	678	681	.	-	.	ID=ORF.0.458_0.61399204562.rbs-0;Parent=ORF.0.458_0.61399204562
testseq_2018-03-08	cpt.fixModel	gene	487	666	.	-	.	ID=ORF.0.459_0.323250347541
testseq_2018-03-08	cpt.fixModel	mRNA	487	666	.	-	.	ID=ORF.0.459_0.323250347541.mRNA;Parent=ORF.0.459_0.323250347541
testseq_2018-03-08	getOrfsOrCds	CDS	487	666	.	-	0	ID=ORF.0.459_0.323250347541.CDS;Parent=ORF.0.459_0.323250347541.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	678	681	.	-	.	ID=ORF.0.459_0.323250347541.rbs-0;Parent=ORF.0.459_0.323250347541
testseq_2018-03-08	cpt.fixModel	gene	487	657	.	-	.	ID=ORF.0.460_0.509039455004
testseq_2018-03-08	cpt.fixModel	mRNA	487	657	.	-	.	ID=ORF.0.460_0.509039455004.mRNA;Parent=ORF.0.460_0.509039455004
testseq_2018-03-08	getOrfsOrCds	CDS	487	657	.	-	0	ID=ORF.0.460_0.509039455004.CDS;Parent=ORF.0.460_0.509039455004.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	665	670	.	-	.	ID=ORF.0.460_0.509039455004.rbs-0;Parent=ORF.0.460_0.509039455004
testseq_2018-03-08	cpt.fixModel	gene	487	654	.	-	.	ID=ORF.0.461_0.392081904542
testseq_2018-03-08	cpt.fixModel	mRNA	487	654	.	-	.	ID=ORF.0.461_0.392081904542.mRNA;Parent=ORF.0.461_0.392081904542
testseq_2018-03-08	getOrfsOrCds	CDS	487	654	.	-	0	ID=ORF.0.461_0.392081904542.CDS;Parent=ORF.0.461_0.392081904542.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	665	669	.	-	.	ID=ORF.0.461_0.392081904542.rbs-0;Parent=ORF.0.461_0.392081904542
testseq_2018-03-08	cpt.fixModel	gene	644	904	.	-	.	ID=ORF.0.699_0.764949625216
testseq_2018-03-08	cpt.fixModel	mRNA	644	904	.	-	.	ID=ORF.0.699_0.764949625216.mRNA;Parent=ORF.0.699_0.764949625216
testseq_2018-03-08	getOrfsOrCds	CDS	644	904	.	-	0	ID=ORF.0.699_0.764949625216.CDS;Parent=ORF.0.699_0.764949625216.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	914	918	.	-	.	ID=ORF.0.699_0.764949625216.rbs-0;Parent=ORF.0.699_0.764949625216
testseq_2018-03-08	cpt.fixModel	gene	644	802	.	-	.	ID=ORF.0.703_0.981371874022
testseq_2018-03-08	cpt.fixModel	mRNA	644	802	.	-	.	ID=ORF.0.703_0.981371874022.mRNA;Parent=ORF.0.703_0.981371874022
testseq_2018-03-08	getOrfsOrCds	CDS	644	802	.	-	0	ID=ORF.0.703_0.981371874022.CDS;Parent=ORF.0.703_0.981371874022.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	811	814	.	-	.	ID=ORF.0.703_0.981371874022.rbs-0;Parent=ORF.0.703_0.981371874022
testseq_2018-03-08	cpt.fixModel	gene	644	775	.	-	.	ID=ORF.0.705_0.438813830323
testseq_2018-03-08	cpt.fixModel	mRNA	644	775	.	-	.	ID=ORF.0.705_0.438813830323.mRNA;Parent=ORF.0.705_0.438813830323
testseq_2018-03-08	getOrfsOrCds	CDS	644	775	.	-	0	ID=ORF.0.705_0.438813830323.CDS;Parent=ORF.0.705_0.438813830323.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	788	790	.	-	.	ID=ORF.0.705_0.438813830323.rbs-0;Parent=ORF.0.705_0.438813830323
testseq_2018-03-08	cpt.fixModel	gene	932	2659	.	-	.	ID=ORF.0.622_0.865794102081
testseq_2018-03-08	cpt.fixModel	mRNA	932	2659	.	-	.	ID=ORF.0.622_0.865794102081.mRNA;Parent=ORF.0.622_0.865794102081
testseq_2018-03-08	getOrfsOrCds	CDS	932	2659	.	-	0	ID=ORF.0.622_0.865794102081.CDS;Parent=ORF.0.622_0.865794102081.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2672	2674	.	-	.	ID=ORF.0.622_0.865794102081.rbs-0;Parent=ORF.0.622_0.865794102081
testseq_2018-03-08	cpt.fixModel	gene	932	2650	.	-	.	ID=ORF.0.623_0.846988205141
testseq_2018-03-08	cpt.fixModel	mRNA	932	2650	.	-	.	ID=ORF.0.623_0.846988205141.mRNA;Parent=ORF.0.623_0.846988205141
testseq_2018-03-08	getOrfsOrCds	CDS	932	2650	.	-	0	ID=ORF.0.623_0.846988205141.CDS;Parent=ORF.0.623_0.846988205141.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2659	2662	.	-	.	ID=ORF.0.623_0.846988205141.rbs-0;Parent=ORF.0.623_0.846988205141
testseq_2018-03-08	cpt.fixModel	gene	932	2605	.	-	.	ID=ORF.0.625_0.0578111846669
testseq_2018-03-08	cpt.fixModel	mRNA	932	2605	.	-	.	ID=ORF.0.625_0.0578111846669.mRNA;Parent=ORF.0.625_0.0578111846669
testseq_2018-03-08	getOrfsOrCds	CDS	932	2605	.	-	0	ID=ORF.0.625_0.0578111846669.CDS;Parent=ORF.0.625_0.0578111846669.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2618	2620	.	-	.	ID=ORF.0.625_0.0578111846669.rbs-0;Parent=ORF.0.625_0.0578111846669
testseq_2018-03-08	cpt.fixModel	gene	932	2572	.	-	.	ID=ORF.0.626_0.303786861772
testseq_2018-03-08	cpt.fixModel	mRNA	932	2572	.	-	.	ID=ORF.0.626_0.303786861772.mRNA;Parent=ORF.0.626_0.303786861772
testseq_2018-03-08	getOrfsOrCds	CDS	932	2572	.	-	0	ID=ORF.0.626_0.303786861772.CDS;Parent=ORF.0.626_0.303786861772.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2584	2586	.	-	.	ID=ORF.0.626_0.303786861772.rbs-0;Parent=ORF.0.626_0.303786861772
testseq_2018-03-08	cpt.fixModel	gene	932	2518	.	-	.	ID=ORF.0.630_0.467112600707
testseq_2018-03-08	cpt.fixModel	mRNA	932	2518	.	-	.	ID=ORF.0.630_0.467112600707.mRNA;Parent=ORF.0.630_0.467112600707
testseq_2018-03-08	getOrfsOrCds	CDS	932	2518	.	-	0	ID=ORF.0.630_0.467112600707.CDS;Parent=ORF.0.630_0.467112600707.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2526	2528	.	-	.	ID=ORF.0.630_0.467112600707.rbs-0;Parent=ORF.0.630_0.467112600707
testseq_2018-03-08	cpt.fixModel	gene	932	2509	.	-	.	ID=ORF.0.631_0.2883116125
testseq_2018-03-08	cpt.fixModel	mRNA	932	2509	.	-	.	ID=ORF.0.631_0.2883116125.mRNA;Parent=ORF.0.631_0.2883116125
testseq_2018-03-08	getOrfsOrCds	CDS	932	2509	.	-	0	ID=ORF.0.631_0.2883116125.CDS;Parent=ORF.0.631_0.2883116125.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2522	2524	.	-	.	ID=ORF.0.631_0.2883116125.rbs-0;Parent=ORF.0.631_0.2883116125
testseq_2018-03-08	cpt.fixModel	gene	932	2404	.	-	.	ID=ORF.0.636_0.876600016398
testseq_2018-03-08	cpt.fixModel	mRNA	932	2404	.	-	.	ID=ORF.0.636_0.876600016398.mRNA;Parent=ORF.0.636_0.876600016398
testseq_2018-03-08	getOrfsOrCds	CDS	932	2404	.	-	0	ID=ORF.0.636_0.876600016398.CDS;Parent=ORF.0.636_0.876600016398.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2416	2418	.	-	.	ID=ORF.0.636_0.876600016398.rbs-0;Parent=ORF.0.636_0.876600016398
testseq_2018-03-08	cpt.fixModel	gene	932	2356	.	-	.	ID=ORF.0.640_0.0888066128056
testseq_2018-03-08	cpt.fixModel	mRNA	932	2356	.	-	.	ID=ORF.0.640_0.0888066128056.mRNA;Parent=ORF.0.640_0.0888066128056
testseq_2018-03-08	getOrfsOrCds	CDS	932	2356	.	-	0	ID=ORF.0.640_0.0888066128056.CDS;Parent=ORF.0.640_0.0888066128056.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2366	2368	.	-	.	ID=ORF.0.640_0.0888066128056.rbs-0;Parent=ORF.0.640_0.0888066128056
testseq_2018-03-08	cpt.fixModel	gene	932	2098	.	-	.	ID=ORF.0.655_0.212962186525
testseq_2018-03-08	cpt.fixModel	mRNA	932	2098	.	-	.	ID=ORF.0.655_0.212962186525.mRNA;Parent=ORF.0.655_0.212962186525
testseq_2018-03-08	getOrfsOrCds	CDS	932	2098	.	-	0	ID=ORF.0.655_0.212962186525.CDS;Parent=ORF.0.655_0.212962186525.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2108	2111	.	-	.	ID=ORF.0.655_0.212962186525.rbs-0;Parent=ORF.0.655_0.212962186525
testseq_2018-03-08	cpt.fixModel	gene	932	2020	.	-	.	ID=ORF.0.659_0.370352364369
testseq_2018-03-08	cpt.fixModel	mRNA	932	2020	.	-	.	ID=ORF.0.659_0.370352364369.mRNA;Parent=ORF.0.659_0.370352364369
testseq_2018-03-08	getOrfsOrCds	CDS	932	2020	.	-	0	ID=ORF.0.659_0.370352364369.CDS;Parent=ORF.0.659_0.370352364369.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2031	2034	.	-	.	ID=ORF.0.659_0.370352364369.rbs-0;Parent=ORF.0.659_0.370352364369
testseq_2018-03-08	cpt.fixModel	gene	932	1996	.	-	.	ID=ORF.0.660_0.561664408596
testseq_2018-03-08	cpt.fixModel	mRNA	932	1996	.	-	.	ID=ORF.0.660_0.561664408596.mRNA;Parent=ORF.0.660_0.561664408596
testseq_2018-03-08	getOrfsOrCds	CDS	932	1996	.	-	0	ID=ORF.0.660_0.561664408596.CDS;Parent=ORF.0.660_0.561664408596.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2009	2011	.	-	.	ID=ORF.0.660_0.561664408596.rbs-0;Parent=ORF.0.660_0.561664408596
testseq_2018-03-08	cpt.fixModel	gene	932	1924	.	-	.	ID=ORF.0.662_0.547739243117
testseq_2018-03-08	cpt.fixModel	mRNA	932	1924	.	-	.	ID=ORF.0.662_0.547739243117.mRNA;Parent=ORF.0.662_0.547739243117
testseq_2018-03-08	getOrfsOrCds	CDS	932	1924	.	-	0	ID=ORF.0.662_0.547739243117.CDS;Parent=ORF.0.662_0.547739243117.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	1930	1933	.	-	.	ID=ORF.0.662_0.547739243117.rbs-0;Parent=ORF.0.662_0.547739243117
testseq_2018-03-08	cpt.fixModel	gene	932	1780	.	-	.	ID=ORF.0.667_0.381504311163
testseq_2018-03-08	cpt.fixModel	mRNA	932	1780	.	-	.	ID=ORF.0.667_0.381504311163.mRNA;Parent=ORF.0.667_0.381504311163
testseq_2018-03-08	getOrfsOrCds	CDS	932	1780	.	-	0	ID=ORF.0.667_0.381504311163.CDS;Parent=ORF.0.667_0.381504311163.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	1787	1789	.	-	.	ID=ORF.0.667_0.381504311163.rbs-0;Parent=ORF.0.667_0.381504311163
testseq_2018-03-08	cpt.fixModel	gene	1303	1413	.	-	.	ID=ORF.0.457_0.112605087319
testseq_2018-03-08	cpt.fixModel	mRNA	1303	1413	.	-	.	ID=ORF.0.457_0.112605087319.mRNA;Parent=ORF.0.457_0.112605087319
testseq_2018-03-08	getOrfsOrCds	CDS	1303	1413	.	-	0	ID=ORF.0.457_0.112605087319.CDS;Parent=ORF.0.457_0.112605087319.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	1421	1424	.	-	.	ID=ORF.0.457_0.112605087319.rbs-0;Parent=ORF.0.457_0.112605087319
testseq_2018-03-08	cpt.fixModel	gene	2673	3473	.	-	.	ID=ORF.0.518_0.704496503167
testseq_2018-03-08	cpt.fixModel	mRNA	2673	3473	.	-	.	ID=ORF.0.518_0.704496503167.mRNA;Parent=ORF.0.518_0.704496503167
testseq_2018-03-08	getOrfsOrCds	CDS	2673	3473	.	-	0	ID=ORF.0.518_0.704496503167.CDS;Parent=ORF.0.518_0.704496503167.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	3484	3488	.	-	.	ID=ORF.0.518_0.704496503167.rbs-0;Parent=ORF.0.518_0.704496503167
testseq_2018-03-08	cpt.fixModel	gene	2673	3140	.	-	.	ID=ORF.0.531_0.284124356131
testseq_2018-03-08	cpt.fixModel	mRNA	2673	3140	.	-	.	ID=ORF.0.531_0.284124356131.mRNA;Parent=ORF.0.531_0.284124356131
testseq_2018-03-08	getOrfsOrCds	CDS	2673	3140	.	-	0	ID=ORF.0.531_0.284124356131.CDS;Parent=ORF.0.531_0.284124356131.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	3153	3155	.	-	.	ID=ORF.0.531_0.284124356131.rbs-0;Parent=ORF.0.531_0.284124356131
testseq_2018-03-08	cpt.fixModel	gene	2673	3077	.	-	.	ID=ORF.0.534_0.230486359187
testseq_2018-03-08	cpt.fixModel	mRNA	2673	3077	.	-	.	ID=ORF.0.534_0.230486359187.mRNA;Parent=ORF.0.534_0.230486359187
testseq_2018-03-08	getOrfsOrCds	CDS	2673	3077	.	-	0	ID=ORF.0.534_0.230486359187.CDS;Parent=ORF.0.534_0.230486359187.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	3083	3085	.	-	.	ID=ORF.0.534_0.230486359187.rbs-0;Parent=ORF.0.534_0.230486359187
testseq_2018-03-08	cpt.fixModel	gene	2673	2765	.	-	.	ID=ORF.0.549_0.435747482069
testseq_2018-03-08	cpt.fixModel	mRNA	2673	2765	.	-	.	ID=ORF.0.549_0.435747482069.mRNA;Parent=ORF.0.549_0.435747482069
testseq_2018-03-08	getOrfsOrCds	CDS	2673	2765	.	-	0	ID=ORF.0.549_0.435747482069.CDS;Parent=ORF.0.549_0.435747482069.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	2774	2777	.	-	.	ID=ORF.0.549_0.435747482069.rbs-0;Parent=ORF.0.549_0.435747482069
testseq_2018-03-08	cpt.fixModel	gene	3362	3739	.	-	.	ID=ORF.0.603_0.488926379773
testseq_2018-03-08	cpt.fixModel	mRNA	3362	3739	.	-	.	ID=ORF.0.603_0.488926379773.mRNA;Parent=ORF.0.603_0.488926379773
testseq_2018-03-08	getOrfsOrCds	CDS	3362	3739	.	-	0	ID=ORF.0.603_0.488926379773.CDS;Parent=ORF.0.603_0.488926379773.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	3749	3754	.	-	.	ID=ORF.0.603_0.488926379773.rbs-0;Parent=ORF.0.603_0.488926379773
testseq_2018-03-08	cpt.fixModel	gene	3362	3706	.	-	.	ID=ORF.0.605_0.950422684088
testseq_2018-03-08	cpt.fixModel	mRNA	3362	3706	.	-	.	ID=ORF.0.605_0.950422684088.mRNA;Parent=ORF.0.605_0.950422684088
testseq_2018-03-08	getOrfsOrCds	CDS	3362	3706	.	-	0	ID=ORF.0.605_0.950422684088.CDS;Parent=ORF.0.605_0.950422684088.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	3719	3721	.	-	.	ID=ORF.0.605_0.950422684088.rbs-0;Parent=ORF.0.605_0.950422684088
testseq_2018-03-08	cpt.fixModel	gene	3362	3688	.	-	.	ID=ORF.0.606_0.329949811104
testseq_2018-03-08	cpt.fixModel	mRNA	3362	3688	.	-	.	ID=ORF.0.606_0.329949811104.mRNA;Parent=ORF.0.606_0.329949811104
testseq_2018-03-08	getOrfsOrCds	CDS	3362	3688	.	-	0	ID=ORF.0.606_0.329949811104.CDS;Parent=ORF.0.606_0.329949811104.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	3699	3702	.	-	.	ID=ORF.0.606_0.329949811104.rbs-0;Parent=ORF.0.606_0.329949811104
testseq_2018-03-08	cpt.fixModel	gene	3362	3550	.	-	.	ID=ORF.0.611_0.815705221168
testseq_2018-03-08	cpt.fixModel	mRNA	3362	3550	.	-	.	ID=ORF.0.611_0.815705221168.mRNA;Parent=ORF.0.611_0.815705221168
testseq_2018-03-08	getOrfsOrCds	CDS	3362	3550	.	-	0	ID=ORF.0.611_0.815705221168.CDS;Parent=ORF.0.611_0.815705221168.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	3559	3561	.	-	.	ID=ORF.0.611_0.815705221168.rbs-0;Parent=ORF.0.611_0.815705221168
testseq_2018-03-08	cpt.fixModel	gene	3362	3493	.	-	.	ID=ORF.0.613_0.104890641676
testseq_2018-03-08	cpt.fixModel	mRNA	3362	3493	.	-	.	ID=ORF.0.613_0.104890641676.mRNA;Parent=ORF.0.613_0.104890641676
testseq_2018-03-08	getOrfsOrCds	CDS	3362	3493	.	-	0	ID=ORF.0.613_0.104890641676.CDS;Parent=ORF.0.613_0.104890641676.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	3506	3508	.	-	.	ID=ORF.0.613_0.104890641676.rbs-0;Parent=ORF.0.613_0.104890641676
testseq_2018-03-08	cpt.fixModel	gene	3433	3537	.	+	.	ID=ORF.0.17_0.711047642618
testseq_2018-03-08	cpt.fixModel	mRNA	3433	3537	.	+	.	ID=ORF.0.17_0.711047642618.mRNA;Parent=ORF.0.17_0.711047642618
testseq_2018-03-08	getOrfsOrCds	CDS	3433	3537	.	+	0	ID=ORF.0.17_0.711047642618.CDS;Parent=ORF.0.17_0.711047642618.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	3419	3421	.	+	.	ID=ORF.0.17_0.711047642618.rbs-0;Parent=ORF.0.17_0.711047642618
testseq_2018-03-08	cpt.fixModel	gene	3986	4114	.	+	.	ID=ORF.0.139_0.904626958426
testseq_2018-03-08	cpt.fixModel	mRNA	3986	4114	.	+	.	ID=ORF.0.139_0.904626958426.mRNA;Parent=ORF.0.139_0.904626958426
testseq_2018-03-08	getOrfsOrCds	CDS	3986	4114	.	+	0	ID=ORF.0.139_0.904626958426.CDS;Parent=ORF.0.139_0.904626958426.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	3971	3973	.	+	.	ID=ORF.0.139_0.904626958426.rbs-0;Parent=ORF.0.139_0.904626958426
testseq_2018-03-08	cpt.fixModel	gene	4006	4101	.	-	.	ID=ORF.0.445_0.286571403109
testseq_2018-03-08	cpt.fixModel	mRNA	4006	4101	.	-	.	ID=ORF.0.445_0.286571403109.mRNA;Parent=ORF.0.445_0.286571403109
testseq_2018-03-08	getOrfsOrCds	CDS	4006	4101	.	-	0	ID=ORF.0.445_0.286571403109.CDS;Parent=ORF.0.445_0.286571403109.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	4108	4110	.	-	.	ID=ORF.0.445_0.286571403109.rbs-0;Parent=ORF.0.445_0.286571403109
testseq_2018-03-08	cpt.fixModel	gene	4071	4190	.	+	.	ID=ORF.0.345_0.971616620883
testseq_2018-03-08	cpt.fixModel	mRNA	4071	4190	.	+	.	ID=ORF.0.345_0.971616620883.mRNA;Parent=ORF.0.345_0.971616620883
testseq_2018-03-08	getOrfsOrCds	CDS	4071	4190	.	+	0	ID=ORF.0.345_0.971616620883.CDS;Parent=ORF.0.345_0.971616620883.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	4057	4059	.	+	.	ID=ORF.0.345_0.971616620883.rbs-0;Parent=ORF.0.345_0.971616620883
testseq_2018-03-08	cpt.fixModel	gene	4095	4190	.	+	.	ID=ORF.0.347_0.0208968983552
testseq_2018-03-08	cpt.fixModel	mRNA	4095	4190	.	+	.	ID=ORF.0.347_0.0208968983552.mRNA;Parent=ORF.0.347_0.0208968983552
testseq_2018-03-08	getOrfsOrCds	CDS	4095	4190	.	+	0	ID=ORF.0.347_0.0208968983552.CDS;Parent=ORF.0.347_0.0208968983552.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	4087	4089	.	+	.	ID=ORF.0.347_0.0208968983552.rbs-0;Parent=ORF.0.347_0.0208968983552
testseq_2018-03-08	cpt.fixModel	gene	4134	4229	.	-	.	ID=ORF.0.517_0.929120702544
testseq_2018-03-08	cpt.fixModel	mRNA	4134	4229	.	-	.	ID=ORF.0.517_0.929120702544.mRNA;Parent=ORF.0.517_0.929120702544
testseq_2018-03-08	getOrfsOrCds	CDS	4134	4229	.	-	0	ID=ORF.0.517_0.929120702544.CDS;Parent=ORF.0.517_0.929120702544.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	4241	4243	.	-	.	ID=ORF.0.517_0.929120702544.rbs-0;Parent=ORF.0.517_0.929120702544
testseq_2018-03-08	cpt.fixModel	gene	4574	5500	.	+	.	ID=ORF.0.146_0.351389104617
testseq_2018-03-08	cpt.fixModel	mRNA	4574	5500	.	+	.	ID=ORF.0.146_0.351389104617.mRNA;Parent=ORF.0.146_0.351389104617
testseq_2018-03-08	getOrfsOrCds	CDS	4574	5500	.	+	0	ID=ORF.0.146_0.351389104617.CDS;Parent=ORF.0.146_0.351389104617.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	4560	4563	.	+	.	ID=ORF.0.146_0.351389104617.rbs-0;Parent=ORF.0.146_0.351389104617
testseq_2018-03-08	cpt.fixModel	gene	5029	5181	.	-	.	ID=ORF.0.439_0.445866101899
testseq_2018-03-08	cpt.fixModel	mRNA	5029	5181	.	-	.	ID=ORF.0.439_0.445866101899.mRNA;Parent=ORF.0.439_0.445866101899
testseq_2018-03-08	getOrfsOrCds	CDS	5029	5181	.	-	0	ID=ORF.0.439_0.445866101899.CDS;Parent=ORF.0.439_0.445866101899.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	5188	5192	.	-	.	ID=ORF.0.439_0.445866101899.rbs-0;Parent=ORF.0.439_0.445866101899
testseq_2018-03-08	cpt.fixModel	gene	5029	5160	.	-	.	ID=ORF.0.440_0.915263915342
testseq_2018-03-08	cpt.fixModel	mRNA	5029	5160	.	-	.	ID=ORF.0.440_0.915263915342.mRNA;Parent=ORF.0.440_0.915263915342
testseq_2018-03-08	getOrfsOrCds	CDS	5029	5160	.	-	0	ID=ORF.0.440_0.915263915342.CDS;Parent=ORF.0.440_0.915263915342.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	5170	5172	.	-	.	ID=ORF.0.440_0.915263915342.rbs-0;Parent=ORF.0.440_0.915263915342
testseq_2018-03-08	cpt.fixModel	gene	5393	5500	.	+	.	ID=ORF.0.183_0.0663532791257
testseq_2018-03-08	cpt.fixModel	mRNA	5393	5500	.	+	.	ID=ORF.0.183_0.0663532791257.mRNA;Parent=ORF.0.183_0.0663532791257
testseq_2018-03-08	getOrfsOrCds	CDS	5393	5500	.	+	0	ID=ORF.0.183_0.0663532791257.CDS;Parent=ORF.0.183_0.0663532791257.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	5381	5383	.	+	.	ID=ORF.0.183_0.0663532791257.rbs-0;Parent=ORF.0.183_0.0663532791257
testseq_2018-03-08	cpt.fixModel	gene	5570	5689	.	+	.	ID=ORF.0.185_0.343675913625
testseq_2018-03-08	cpt.fixModel	mRNA	5570	5689	.	+	.	ID=ORF.0.185_0.343675913625.mRNA;Parent=ORF.0.185_0.343675913625
testseq_2018-03-08	getOrfsOrCds	CDS	5570	5689	.	+	0	ID=ORF.0.185_0.343675913625.CDS;Parent=ORF.0.185_0.343675913625.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	5562	5564	.	+	.	ID=ORF.0.185_0.343675913625.rbs-0;Parent=ORF.0.185_0.343675913625
testseq_2018-03-08	cpt.fixModel	gene	6095	6205	.	-	.	ID=ORF.0.580_0.42130451371
testseq_2018-03-08	cpt.fixModel	mRNA	6095	6205	.	-	.	ID=ORF.0.580_0.42130451371.mRNA;Parent=ORF.0.580_0.42130451371
testseq_2018-03-08	getOrfsOrCds	CDS	6095	6205	.	-	0	ID=ORF.0.580_0.42130451371.CDS;Parent=ORF.0.580_0.42130451371.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	6218	6220	.	-	.	ID=ORF.0.580_0.42130451371.rbs-0;Parent=ORF.0.580_0.42130451371
testseq_2018-03-08	cpt.fixModel	gene	6166	6282	.	-	.	ID=ORF.0.429_0.211525337226
testseq_2018-03-08	cpt.fixModel	mRNA	6166	6282	.	-	.	ID=ORF.0.429_0.211525337226.mRNA;Parent=ORF.0.429_0.211525337226
testseq_2018-03-08	getOrfsOrCds	CDS	6166	6282	.	-	0	ID=ORF.0.429_0.211525337226.CDS;Parent=ORF.0.429_0.211525337226.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	6288	6290	.	-	.	ID=ORF.0.429_0.211525337226.rbs-0;Parent=ORF.0.429_0.211525337226
testseq_2018-03-08	cpt.fixModel	gene	6206	6973	.	+	.	ID=ORF.0.202_0.502577350308
testseq_2018-03-08	cpt.fixModel	mRNA	6206	6973	.	+	.	ID=ORF.0.202_0.502577350308.mRNA;Parent=ORF.0.202_0.502577350308
testseq_2018-03-08	getOrfsOrCds	CDS	6206	6973	.	+	0	ID=ORF.0.202_0.502577350308.CDS;Parent=ORF.0.202_0.502577350308.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	6196	6198	.	+	.	ID=ORF.0.202_0.502577350308.rbs-0;Parent=ORF.0.202_0.502577350308
testseq_2018-03-08	cpt.fixModel	gene	6545	6973	.	+	.	ID=ORF.0.217_0.854168148494
testseq_2018-03-08	cpt.fixModel	mRNA	6545	6973	.	+	.	ID=ORF.0.217_0.854168148494.mRNA;Parent=ORF.0.217_0.854168148494
testseq_2018-03-08	getOrfsOrCds	CDS	6545	6973	.	+	0	ID=ORF.0.217_0.854168148494.CDS;Parent=ORF.0.217_0.854168148494.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	6530	6532	.	+	.	ID=ORF.0.217_0.854168148494.rbs-0;Parent=ORF.0.217_0.854168148494
testseq_2018-03-08	cpt.fixModel	gene	6704	6973	.	+	.	ID=ORF.0.224_0.295192659405
testseq_2018-03-08	cpt.fixModel	mRNA	6704	6973	.	+	.	ID=ORF.0.224_0.295192659405.mRNA;Parent=ORF.0.224_0.295192659405
testseq_2018-03-08	getOrfsOrCds	CDS	6704	6973	.	+	0	ID=ORF.0.224_0.295192659405.CDS;Parent=ORF.0.224_0.295192659405.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	6692	6695	.	+	.	ID=ORF.0.224_0.295192659405.rbs-0;Parent=ORF.0.224_0.295192659405
testseq_2018-03-08	cpt.fixModel	gene	6978	7094	.	+	.	ID=ORF.0.355_0.773691408662
testseq_2018-03-08	cpt.fixModel	mRNA	6978	7094	.	+	.	ID=ORF.0.355_0.773691408662.mRNA;Parent=ORF.0.355_0.773691408662
testseq_2018-03-08	getOrfsOrCds	CDS	6978	7094	.	+	0	ID=ORF.0.355_0.773691408662.CDS;Parent=ORF.0.355_0.773691408662.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	6967	6971	.	+	.	ID=ORF.0.355_0.773691408662.rbs-0;Parent=ORF.0.355_0.773691408662
testseq_2018-03-08	cpt.fixModel	gene	7016	7156	.	-	.	ID=ORF.0.571_0.245647554641
testseq_2018-03-08	cpt.fixModel	mRNA	7016	7156	.	-	.	ID=ORF.0.571_0.245647554641.mRNA;Parent=ORF.0.571_0.245647554641
testseq_2018-03-08	getOrfsOrCds	CDS	7016	7156	.	-	0	ID=ORF.0.571_0.245647554641.CDS;Parent=ORF.0.571_0.245647554641.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7163	7166	.	-	.	ID=ORF.0.571_0.245647554641.rbs-0;Parent=ORF.0.571_0.245647554641
testseq_2018-03-08	cpt.fixModel	gene	7056	7244	.	-	.	ID=ORF.0.492_0.914947831416
testseq_2018-03-08	cpt.fixModel	mRNA	7056	7244	.	-	.	ID=ORF.0.492_0.914947831416.mRNA;Parent=ORF.0.492_0.914947831416
testseq_2018-03-08	getOrfsOrCds	CDS	7056	7244	.	-	0	ID=ORF.0.492_0.914947831416.CDS;Parent=ORF.0.492_0.914947831416.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7250	7253	.	-	.	ID=ORF.0.492_0.914947831416.rbs-0;Parent=ORF.0.492_0.914947831416
testseq_2018-03-08	cpt.fixModel	gene	7056	7229	.	-	.	ID=ORF.0.494_0.190486747638
testseq_2018-03-08	cpt.fixModel	mRNA	7056	7229	.	-	.	ID=ORF.0.494_0.190486747638.mRNA;Parent=ORF.0.494_0.190486747638
testseq_2018-03-08	getOrfsOrCds	CDS	7056	7229	.	-	0	ID=ORF.0.494_0.190486747638.CDS;Parent=ORF.0.494_0.190486747638.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7235	7237	.	-	.	ID=ORF.0.494_0.190486747638.rbs-0;Parent=ORF.0.494_0.190486747638
testseq_2018-03-08	cpt.fixModel	gene	7072	7395	.	+	.	ID=ORF.0.33_0.821816667683
testseq_2018-03-08	cpt.fixModel	mRNA	7072	7395	.	+	.	ID=ORF.0.33_0.821816667683.mRNA;Parent=ORF.0.33_0.821816667683
testseq_2018-03-08	getOrfsOrCds	CDS	7072	7395	.	+	0	ID=ORF.0.33_0.821816667683.CDS;Parent=ORF.0.33_0.821816667683.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7061	7065	.	+	.	ID=ORF.0.33_0.821816667683.rbs-0;Parent=ORF.0.33_0.821816667683
testseq_2018-03-08	cpt.fixModel	gene	7078	7395	.	+	.	ID=ORF.0.34_0.707053863467
testseq_2018-03-08	cpt.fixModel	mRNA	7078	7395	.	+	.	ID=ORF.0.34_0.707053863467.mRNA;Parent=ORF.0.34_0.707053863467
testseq_2018-03-08	getOrfsOrCds	CDS	7078	7395	.	+	0	ID=ORF.0.34_0.707053863467.CDS;Parent=ORF.0.34_0.707053863467.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7063	7066	.	+	.	ID=ORF.0.34_0.707053863467.rbs-0;Parent=ORF.0.34_0.707053863467
testseq_2018-03-08	cpt.fixModel	gene	7379	7855	.	+	.	ID=ORF.0.231_0.000923123852602
testseq_2018-03-08	cpt.fixModel	mRNA	7379	7855	.	+	.	ID=ORF.0.231_0.000923123852602.mRNA;Parent=ORF.0.231_0.000923123852602
testseq_2018-03-08	getOrfsOrCds	CDS	7379	7855	.	+	0	ID=ORF.0.231_0.000923123852602.CDS;Parent=ORF.0.231_0.000923123852602.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7369	7372	.	+	.	ID=ORF.0.231_0.000923123852602.rbs-0;Parent=ORF.0.231_0.000923123852602
testseq_2018-03-08	cpt.fixModel	gene	7418	7855	.	+	.	ID=ORF.0.233_0.405974692709
testseq_2018-03-08	cpt.fixModel	mRNA	7418	7855	.	+	.	ID=ORF.0.233_0.405974692709.mRNA;Parent=ORF.0.233_0.405974692709
testseq_2018-03-08	getOrfsOrCds	CDS	7418	7855	.	+	0	ID=ORF.0.233_0.405974692709.CDS;Parent=ORF.0.233_0.405974692709.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7404	7406	.	+	.	ID=ORF.0.233_0.405974692709.rbs-0;Parent=ORF.0.233_0.405974692709
testseq_2018-03-08	cpt.fixModel	gene	7658	7855	.	+	.	ID=ORF.0.237_0.755472071473
testseq_2018-03-08	cpt.fixModel	mRNA	7658	7855	.	+	.	ID=ORF.0.237_0.755472071473.mRNA;Parent=ORF.0.237_0.755472071473
testseq_2018-03-08	getOrfsOrCds	CDS	7658	7855	.	+	0	ID=ORF.0.237_0.755472071473.CDS;Parent=ORF.0.237_0.755472071473.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7650	7652	.	+	.	ID=ORF.0.237_0.755472071473.rbs-0;Parent=ORF.0.237_0.755472071473
testseq_2018-03-08	cpt.fixModel	gene	7664	7855	.	+	.	ID=ORF.0.238_0.914046339376
testseq_2018-03-08	cpt.fixModel	mRNA	7664	7855	.	+	.	ID=ORF.0.238_0.914046339376.mRNA;Parent=ORF.0.238_0.914046339376
testseq_2018-03-08	getOrfsOrCds	CDS	7664	7855	.	+	0	ID=ORF.0.238_0.914046339376.CDS;Parent=ORF.0.238_0.914046339376.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7650	7653	.	+	.	ID=ORF.0.238_0.914046339376.rbs-0;Parent=ORF.0.238_0.914046339376
testseq_2018-03-08	cpt.fixModel	gene	7806	7922	.	+	.	ID=ORF.0.365_0.2945108684
testseq_2018-03-08	cpt.fixModel	mRNA	7806	7922	.	+	.	ID=ORF.0.365_0.2945108684.mRNA;Parent=ORF.0.365_0.2945108684
testseq_2018-03-08	getOrfsOrCds	CDS	7806	7922	.	+	0	ID=ORF.0.365_0.2945108684.CDS;Parent=ORF.0.365_0.2945108684.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7791	7793	.	+	.	ID=ORF.0.365_0.2945108684.rbs-0;Parent=ORF.0.365_0.2945108684
testseq_2018-03-08	cpt.fixModel	gene	7852	8313	.	+	.	ID=ORF.0.50_0.415010657017
testseq_2018-03-08	cpt.fixModel	mRNA	7852	8313	.	+	.	ID=ORF.0.50_0.415010657017.mRNA;Parent=ORF.0.50_0.415010657017
testseq_2018-03-08	getOrfsOrCds	CDS	7852	8313	.	+	0	ID=ORF.0.50_0.415010657017.CDS;Parent=ORF.0.50_0.415010657017.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	7839	7841	.	+	.	ID=ORF.0.50_0.415010657017.rbs-0;Parent=ORF.0.50_0.415010657017
testseq_2018-03-08	cpt.fixModel	gene	8072	8254	.	+	.	ID=ORF.0.247_0.938715889806
testseq_2018-03-08	cpt.fixModel	mRNA	8072	8254	.	+	.	ID=ORF.0.247_0.938715889806.mRNA;Parent=ORF.0.247_0.938715889806
testseq_2018-03-08	getOrfsOrCds	CDS	8072	8254	.	+	0	ID=ORF.0.247_0.938715889806.CDS;Parent=ORF.0.247_0.938715889806.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8060	8064	.	+	.	ID=ORF.0.247_0.938715889806.rbs-0;Parent=ORF.0.247_0.938715889806
testseq_2018-03-08	cpt.fixModel	gene	8128	8313	.	+	.	ID=ORF.0.65_0.403948729686
testseq_2018-03-08	cpt.fixModel	mRNA	8128	8313	.	+	.	ID=ORF.0.65_0.403948729686.mRNA;Parent=ORF.0.65_0.403948729686
testseq_2018-03-08	getOrfsOrCds	CDS	8128	8313	.	+	0	ID=ORF.0.65_0.403948729686.CDS;Parent=ORF.0.65_0.403948729686.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8116	8118	.	+	.	ID=ORF.0.65_0.403948729686.rbs-0;Parent=ORF.0.65_0.403948729686
testseq_2018-03-08	cpt.fixModel	gene	8152	8640	.	-	.	ID=ORF.0.380_0.771335496557
testseq_2018-03-08	cpt.fixModel	mRNA	8152	8640	.	-	.	ID=ORF.0.380_0.771335496557.mRNA;Parent=ORF.0.380_0.771335496557
testseq_2018-03-08	getOrfsOrCds	CDS	8152	8640	.	-	0	ID=ORF.0.380_0.771335496557.CDS;Parent=ORF.0.380_0.771335496557.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8652	8654	.	-	.	ID=ORF.0.380_0.771335496557.rbs-0;Parent=ORF.0.380_0.771335496557
testseq_2018-03-08	cpt.fixModel	gene	8152	8436	.	-	.	ID=ORF.0.391_0.169373954797
testseq_2018-03-08	cpt.fixModel	mRNA	8152	8436	.	-	.	ID=ORF.0.391_0.169373954797.mRNA;Parent=ORF.0.391_0.169373954797
testseq_2018-03-08	getOrfsOrCds	CDS	8152	8436	.	-	0	ID=ORF.0.391_0.169373954797.CDS;Parent=ORF.0.391_0.169373954797.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8444	8446	.	-	.	ID=ORF.0.391_0.169373954797.rbs-0;Parent=ORF.0.391_0.169373954797
testseq_2018-03-08	cpt.fixModel	gene	8152	8271	.	-	.	ID=ORF.0.400_0.811321232506
testseq_2018-03-08	cpt.fixModel	mRNA	8152	8271	.	-	.	ID=ORF.0.400_0.811321232506.mRNA;Parent=ORF.0.400_0.811321232506
testseq_2018-03-08	getOrfsOrCds	CDS	8152	8271	.	-	0	ID=ORF.0.400_0.811321232506.CDS;Parent=ORF.0.400_0.811321232506.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8281	8284	.	-	.	ID=ORF.0.400_0.811321232506.rbs-0;Parent=ORF.0.400_0.811321232506
testseq_2018-03-08	cpt.fixModel	gene	8339	8782	.	+	.	ID=ORF.0.260_0.577298671452
testseq_2018-03-08	cpt.fixModel	mRNA	8339	8782	.	+	.	ID=ORF.0.260_0.577298671452.mRNA;Parent=ORF.0.260_0.577298671452
testseq_2018-03-08	getOrfsOrCds	CDS	8339	8782	.	+	0	ID=ORF.0.260_0.577298671452.CDS;Parent=ORF.0.260_0.577298671452.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8330	8332	.	+	.	ID=ORF.0.260_0.577298671452.rbs-0;Parent=ORF.0.260_0.577298671452
testseq_2018-03-08	cpt.fixModel	gene	8360	8782	.	+	.	ID=ORF.0.261_0.357298653378
testseq_2018-03-08	cpt.fixModel	mRNA	8360	8782	.	+	.	ID=ORF.0.261_0.357298653378.mRNA;Parent=ORF.0.261_0.357298653378
testseq_2018-03-08	getOrfsOrCds	CDS	8360	8782	.	+	0	ID=ORF.0.261_0.357298653378.CDS;Parent=ORF.0.261_0.357298653378.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8348	8351	.	+	.	ID=ORF.0.261_0.357298653378.rbs-0;Parent=ORF.0.261_0.357298653378
testseq_2018-03-08	cpt.fixModel	gene	8453	8782	.	+	.	ID=ORF.0.268_0.501011908227
testseq_2018-03-08	cpt.fixModel	mRNA	8453	8782	.	+	.	ID=ORF.0.268_0.501011908227.mRNA;Parent=ORF.0.268_0.501011908227
testseq_2018-03-08	getOrfsOrCds	CDS	8453	8782	.	+	0	ID=ORF.0.268_0.501011908227.CDS;Parent=ORF.0.268_0.501011908227.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8438	8440	.	+	.	ID=ORF.0.268_0.501011908227.rbs-0;Parent=ORF.0.268_0.501011908227
testseq_2018-03-08	cpt.fixModel	gene	8504	8782	.	+	.	ID=ORF.0.269_0.219984821414
testseq_2018-03-08	cpt.fixModel	mRNA	8504	8782	.	+	.	ID=ORF.0.269_0.219984821414.mRNA;Parent=ORF.0.269_0.219984821414
testseq_2018-03-08	getOrfsOrCds	CDS	8504	8782	.	+	0	ID=ORF.0.269_0.219984821414.CDS;Parent=ORF.0.269_0.219984821414.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8493	8495	.	+	.	ID=ORF.0.269_0.219984821414.rbs-0;Parent=ORF.0.269_0.219984821414
testseq_2018-03-08	cpt.fixModel	gene	8621	8782	.	+	.	ID=ORF.0.278_0.44001518346
testseq_2018-03-08	cpt.fixModel	mRNA	8621	8782	.	+	.	ID=ORF.0.278_0.44001518346.mRNA;Parent=ORF.0.278_0.44001518346
testseq_2018-03-08	getOrfsOrCds	CDS	8621	8782	.	+	0	ID=ORF.0.278_0.44001518346.CDS;Parent=ORF.0.278_0.44001518346.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8612	8614	.	+	.	ID=ORF.0.278_0.44001518346.rbs-0;Parent=ORF.0.278_0.44001518346
testseq_2018-03-08	cpt.fixModel	gene	8944	9198	.	+	.	ID=ORF.0.81_0.839099082128
testseq_2018-03-08	cpt.fixModel	mRNA	8944	9198	.	+	.	ID=ORF.0.81_0.839099082128.mRNA;Parent=ORF.0.81_0.839099082128
testseq_2018-03-08	getOrfsOrCds	CDS	8944	9198	.	+	0	ID=ORF.0.81_0.839099082128.CDS;Parent=ORF.0.81_0.839099082128.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	8929	8931	.	+	.	ID=ORF.0.81_0.839099082128.rbs-0;Parent=ORF.0.81_0.839099082128
testseq_2018-03-08	cpt.fixModel	gene	9037	9198	.	+	.	ID=ORF.0.87_0.518549362319
testseq_2018-03-08	cpt.fixModel	mRNA	9037	9198	.	+	.	ID=ORF.0.87_0.518549362319.mRNA;Parent=ORF.0.87_0.518549362319
testseq_2018-03-08	getOrfsOrCds	CDS	9037	9198	.	+	0	ID=ORF.0.87_0.518549362319.CDS;Parent=ORF.0.87_0.518549362319.mRNA
testseq_2018-03-08	CPT_ShineFind	Shine_Dalgarno_sequence	9022	9024	.	+	.	ID=ORF.0.87_0.518549362319.rbs-0;Parent=ORF.0.87_0.518549362319