Mercurial > repos > cpt > cpt_psm_comparison_table
annotate lib/CPT/Plot/Class.pm @ 1:f093e08f21f3 draft default tip
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date | Mon, 05 Jun 2023 02:47:24 +0000 |
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1 package CPT::Plot::Class; |
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2 use Moose; |
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3 use Data::Dumper; |
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4 |
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5 # ABSTRACT: Class of objects for use in a genome map |
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6 # |
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7 has 'objects' => ( is => 'rw', isa => 'ArrayRef', default => sub { [] } ); |
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8 |
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9 # Should this class be used in calculation of partitions |
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10 has 'included' => ( is => 'rw', isa => 'Bool' ); |
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11 |
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12 has 'key' => ( is => 'rw', isa => 'Str' ); |
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13 has 'color' => ( is => 'rw', isa => 'Str' ); |
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14 has 'border' => ( is => 'rw', isa => 'Str' ); |
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15 has 'plot' => ( is => 'rw', isa => 'Bool' ); |
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16 |
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17 sub addObject { |
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18 my ( $self, $object ) = @_; |
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19 push( @{ $self->objects() }, $object ); |
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20 } |
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21 |
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22 sub getItemList { |
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23 my ($self) = @_; |
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24 my @items; |
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25 foreach ( @{ $self->objects() } ) { |
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26 push( @items, $_->getLocations() ); |
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27 } |
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28 return \@items; |
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29 } |
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30 |
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31 sub getObjects { |
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32 my ($self) = @_; |
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33 return $self->objects(); |
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34 } |
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35 |
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36 sub getMemberCount { |
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37 my ($self) = @_; |
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38 return scalar @{ $self->objects() }; |
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39 } |
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40 |
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41 no Moose; |
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42 1; |
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43 |
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44 __END__ |
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45 |
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46 =pod |
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47 |
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48 =encoding UTF-8 |
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49 |
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50 =head1 NAME |
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51 |
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52 CPT::Plot::Class - Class of objects for use in a genome map |
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53 |
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54 =head1 VERSION |
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55 |
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56 version 1.96 |
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57 |
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58 =head1 AUTHOR |
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59 |
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60 Eric Rasche <rasche.eric@yandex.ru> |
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61 |
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62 =head1 COPYRIGHT AND LICENSE |
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63 |
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64 This software is Copyright (c) 2014 by Eric Rasche. |
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65 |
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66 This is free software, licensed under: |
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67 |
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68 The GNU General Public License, Version 3, June 2007 |
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69 |
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70 =cut |