Mercurial > repos > cpt > cpt_psm_plotter
diff lib/CPT/Filetype/fasta.pm @ 1:8691c1c61a8e draft default tip
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author | cpt |
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date | Mon, 05 Jun 2023 02:48:47 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/lib/CPT/Filetype/fasta.pm Mon Jun 05 02:48:47 2023 +0000 @@ -0,0 +1,51 @@ +package CPT::Filetype::fasta; +no warnings; +use Moose; +with 'CPT::Filetype'; + +sub score { + my ($self) = @_; + my @l = @{$self->lines()}; + + for(my $i = 0; $i < scalar(@l) - 1; $i++){ + if(substr($l[$i],0,1) eq '>' && $l[$i+1] =~ /[A-Za-z]/){ + return 1; + } + } + return 0; +} + +sub name { + return 'fasta'; +} + +no Moose; +1; + +__END__ + +=pod + +=encoding UTF-8 + +=head1 NAME + +CPT::Filetype::fasta + +=head1 VERSION + +version 1.99.4 + +=head1 AUTHOR + +Eric Rasche <rasche.eric@yandex.ru> + +=head1 COPYRIGHT AND LICENSE + +This software is Copyright (c) 2014 by Eric Rasche. + +This is free software, licensed under: + + The GNU General Public License, Version 3, June 2007 + +=cut