Mercurial > repos > cpt > cpt_psm_recombine

annotate lib/CPT/Plot/Gene.pm @ 1:97ef96676b48 draft

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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author cpt
date Mon, 05 Jun 2023 02:51:26 +0000
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1 package CPT::Plot::Gene;
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2 use Moose;
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3 use strict;
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4 use warnings;
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5
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6 # ABSTRACT: Stupid representation of a gene. Does not handle joined genes
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7 has 'start' => ( is => 'rw', isa => 'Int' );
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8 has 'end' => ( is => 'rw', isa => 'Int' );
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9 has 'tag' => ( is => 'rw', isa => 'Str' );
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10 has 'label' => ( is => 'rw', isa => 'Str' );
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11 has 'strand' => ( is => 'rw', isa => 'Str' );
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12 has 'color' => ( is => 'rw', isa => 'Any' );
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13
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14 sub getLocations {
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15 my ($self) = @_;
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16 return [ $self->start(), $self->end() ];
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17 }
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19 no Moose;
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20 1;
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21
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22 __END__
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23
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24 =pod
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25
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26 =encoding UTF-8
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27
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28 =head1 NAME
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30 CPT::Plot::Gene - Stupid representation of a gene. Does not handle joined genes
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31
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32 =head1 VERSION
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33
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34 version 1.96
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35
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36 =head1 AUTHOR
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37
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38 Eric Rasche <rasche.eric@yandex.ru>
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39
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40 =head1 COPYRIGHT AND LICENSE
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41
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42 This software is Copyright (c) 2014 by Eric Rasche.
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43
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44 This is free software, licensed under:
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45
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46 The GNU General Public License, Version 3, June 2007
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47
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48 =cut