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author cpt
date Fri, 05 Jan 2024 05:57:22 +0000
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1 # Data location for proximity to lysis project
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3 ### lysis-family-v.1.0.3.json : Added new spanin domain synonyms. Terms found from spanin dbase analysis by @JRR.
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5 # /attic
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6 old/obsolete/unused data. Kept only to follow tracks.
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8 ### lysis-family.json : houses synonyms for lysis queries
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9 ### GO-lysis-query.json : GO term lysis synonyms found using goQuery.py
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10 ### go-synonym-results.txt : tab-delimited results from initial goQuery.py
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11 ### go-synonym-results-JRR.txt : @JRR culled results from go-synonym-results.txt
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12 ### lysis-family-expanded.json : Merged results from lysis-family.json and GO-lysis-query.json
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13 ### lysis-family-expanded_culled.json : Cleaned up version of the expanded.json
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14 ### lysis-family-v.1.0.0.json : First offical version of lysis family dbase. Revised based on additions/critiques by @LM and @JRR
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15 ### lysis-family-v.1.0.1.json : Added new domains for both holins and spanins.
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16 ### lysis-family-v.1.0.2.json : Added new spanin synonyms.
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18 # /term_additions
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19 * Files made by @JRR and/or @LTM to add terms to the database
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20 ### endolysin domains to add.txt : citation ==> [PMID: 30873139](https://www.ncbi.nlm.nih.gov/pubmed/30873139)
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21 ### 200505_Spanin_Domains.txt : citation ==> [Spanin Interpro](http://www.ebi.ac.uk/interpro/search/text/spanin/?page=1#table)
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22 ### 200505_holin_domains.txt : citation ==> [Holin Interpro](http://www.ebi.ac.uk/interpro/search/text/holin/?page=1#table)