Mercurial > repos > crs4 > blat

comparison tool_dependencies.xml @ 0:0a71a7d35d09 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author crs4
date Wed, 16 Oct 2013 13:54:38 -0400
parents
children c4ad58c4bc7d
comparison
equal deleted inserted replaced
-1:000000000000 0:0a71a7d35d09
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="blat" version="35">
4 <!-- <repository name="package_blat_35x1" owner="iuc" /> This may be used instead of everything inside <install> when a stable Galaxy release will support the 'download_binary' action type -->
5 <install version="1.0">
6 <actions>
7 <action type="download_by_url" target_filename="blatSrc.zip">http://hgwdev.cse.ucsc.edu/~kent/src/blatSrc35.zip</action>
8 <action type="shell_command">export MACHTYPE=`uname -m` &amp;&amp; export HOME=$INSTALL_DIR &amp;&amp; mkdir -p $HOME/bin/$MACHTYPE &amp;&amp; make</action>
9 <action type="set_environment">
10 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin/`uname -m`</environment_variable>
11 </action>
12 </actions>
13 </install>
14 </package>
15 </tool_dependency>