Mercurial > repos > crs4 > blat
view tool_dependencies.xml @ 0:0a71a7d35d09 draft
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author | crs4 |
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date | Wed, 16 Oct 2013 13:54:38 -0400 |
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children | c4ad58c4bc7d |
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<?xml version="1.0"?> <tool_dependency> <package name="blat" version="35"> <!-- <repository name="package_blat_35x1" owner="iuc" /> This may be used instead of everything inside <install> when a stable Galaxy release will support the 'download_binary' action type --> <install version="1.0"> <actions> <action type="download_by_url" target_filename="blatSrc.zip">http://hgwdev.cse.ucsc.edu/~kent/src/blatSrc35.zip</action> <action type="shell_command">export MACHTYPE=`uname -m` && export HOME=$INSTALL_DIR && mkdir -p $HOME/bin/$MACHTYPE && make</action> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin/`uname -m`</environment_variable> </action> </actions> </install> </package> </tool_dependency>