Mercurial > repos > crs4 > edena

comparison tool_dependencies.xml @ 0:60609a9cef3b draft

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author crs4
date Mon, 09 Sep 2013 05:44:31 -0400
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children b8c6a38530eb
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-1:000000000000 0:60609a9cef3b
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="edena" version="3.130110">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">http://www.genomic.ch/edena/EdenaV3.130110.tar.gz</action>
7 <action type="shell_command">make</action>
8 <action type="move_directory_files">
9 <source_directory>bin</source_directory>
10 <destination_directory>$INSTALL_DIR/bin</destination_directory>
11 </action>
12 <action type="set_environment">
13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
14 </action>
15 <action type="set_environment">
16 <environment_variable name="EDENA_SITE_OPTIONS" action="set_to">"--nThreads 2"</environment_variable>
17 </action>
18 </actions>
19 </install>
20 <readme>
21 Change the EDENA_SITE_OPTIONS variable in the installed env.sh file to adjust the number of threads to use (--nThreads).
22 </readme>
23 </package>
24 </tool_dependency>