--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Sep 09 06:11:47 2013 -0400
@@ -0,0 +1,27 @@
+<?xml version="1.0"?>
+<tool_dependency>
+  <package name="edge-pro" version="1.3.1">
+    <install version="1.0">
+      <actions>
+        <action type="download_by_url">http://ccb.jhu.edu/software/EDGE-pro/EDGE_pro_v1.3.1.tar.gz</action>
+        <action type="shell_command">make</action>
+        <action type="move_file">
+          <source>count</source>
+          <destination>$INSTALL_DIR/bin</destination>
+        </action>
+        <action type="move_file">
+          <source>edge.pl</source>
+          <destination>$INSTALL_DIR/bin</destination>
+        </action>
+        <action type="set_environment">
+          <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+        </action>
+      </actions>
+    </install>
+    <readme>
+Dependencies of EDGE-pro which needs to be installed separately:
+- bowtie2 ( http://bowtie-bio.sourceforge.net/bowtie2/ ), in particular bowtie2, bowtie2-align and bowtie2-build need to be in the $PATH . These are usually already installed for Galaxy;
+- Switch Perl core module ( http://search.cpan.org/~rgarcia/Switch/Switch.pm ).
+    </readme>
+  </package>
+</tool_dependency>