Mercurial > repos > crs4 > prokka
diff test-data/out.gbk @ 13:a17498c603ec draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit ce8dd97ca529558ec475f5eb1f2ce40d765fe396
| author | iuc |
|---|---|
| date | Tue, 21 Mar 2017 10:13:06 -0400 |
| parents | 392255fa7ab9 |
| children | eaee459f3d69 |
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--- a/test-data/out.gbk Fri Jan 20 03:39:08 2017 -0500 +++ b/test-data/out.gbk Tue Mar 21 10:13:06 2017 -0400 @@ -1,4 +1,4 @@ -LOCUS contig1 350 bp DNA linear 11-OCT-2016 +LOCUS contig1 350 bp DNA linear 21-MAR-2017 DEFINITION Genus species strain strain. ACCESSION VERSION @@ -6,7 +6,8 @@ SOURCE Genus species ORGANISM Genus species Unclassified. -COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. +COMMENT Annotated using prokka 1.12 from + https://github.com/tseemann/prokka. FEATURES Location/Qualifiers source 1..350 /organism="Genus species" @@ -20,7 +21,7 @@ 241 tggcttaata tgcttggcac gttcgtcaag gactggttta gatatgagtc acattttgtt 301 catggtagag attctcttgt tgacatttta aaagagcgtg gattactatc // -LOCUS contig2 840 bp DNA linear 11-OCT-2016 +LOCUS contig2 840 bp DNA linear 21-MAR-2017 DEFINITION Genus species strain strain. ACCESSION VERSION @@ -28,7 +29,8 @@ SOURCE Genus species ORGANISM Genus species Unclassified. -COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. +COMMENT Annotated using prokka 1.12 from + https://github.com/tseemann/prokka. FEATURES Location/Qualifiers source 1..840 /organism="Genus species" @@ -36,7 +38,7 @@ /strain="strain" CDS 40..498 /locus_tag="PROKKA_00001" - /inference="ab initio prediction:Prodigal:2.60" + /inference="ab initio prediction:Prodigal:2.6" /codon_start=1 /transl_table=11 /product="hypothetical protein" @@ -45,7 +47,7 @@ FTENIINGVERPVKAAELFAFTLRVRAGNTDVLTDAEENVRQKLRAEGVM" CDS 498..614 /locus_tag="PROKKA_00002" - /inference="ab initio prediction:Prodigal:2.60" + /inference="ab initio prediction:Prodigal:2.6" /codon_start=1 /transl_table=11 /product="hypothetical protein" @@ -66,7 +68,7 @@ 721 agattggtcg tcttattacc atttcaacta ctccggttat cgctggcgac tccttcgaga 781 tggacgccgt tggcgctctc cgtctttctc cattgcgtcg tggccttgct attgactcta // -LOCUS contig3 210 bp DNA linear 11-OCT-2016 +LOCUS contig3 210 bp DNA linear 21-MAR-2017 DEFINITION Genus species strain strain. ACCESSION VERSION @@ -74,7 +76,8 @@ SOURCE Genus species ORGANISM Genus species Unclassified. -COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. +COMMENT Annotated using prokka 1.12 from + https://github.com/tseemann/prokka. FEATURES Location/Qualifiers source 1..210 /organism="Genus species" @@ -86,7 +89,7 @@ 121 ttgaccatgc cgcttttctt ggcacgatta accctgatac caataaaatc cctaagcatt 181 tgtttcaggg ttatttgaat atctataaca // -LOCUS contig4 1260 bp DNA linear 11-OCT-2016 +LOCUS contig4 1260 bp DNA linear 21-MAR-2017 DEFINITION Genus species strain strain. ACCESSION VERSION @@ -94,7 +97,8 @@ SOURCE Genus species ORGANISM Genus species Unclassified. -COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. +COMMENT Annotated using prokka 1.12 from + https://github.com/tseemann/prokka. FEATURES Location/Qualifiers source 1..1260 /organism="Genus species" @@ -102,7 +106,7 @@ /strain="strain" CDS 21..884 /locus_tag="PROKKA_00003" - /inference="ab initio prediction:Prodigal:2.60" + /inference="ab initio prediction:Prodigal:2.6" /codon_start=1 /transl_table=11 /product="hypothetical protein" @@ -135,7 +139,7 @@ 1141 taatgctggt aatggtggtt ttcttcattg cattcagatg gatacatctg tcaacgccgc 1201 taatcaggtt gtttctgttg gtgctgatat tgcttttgat gccgacccta aattttttgc // -LOCUS contig5 490 bp DNA linear 11-OCT-2016 +LOCUS contig5 490 bp DNA linear 21-MAR-2017 DEFINITION Genus species strain strain. ACCESSION VERSION @@ -143,7 +147,8 @@ SOURCE Genus species ORGANISM Genus species Unclassified. -COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. +COMMENT Annotated using prokka 1.12 from + https://github.com/tseemann/prokka. FEATURES Location/Qualifiers source 1..490 /organism="Genus species" @@ -151,7 +156,7 @@ /strain="strain" CDS 275..406 /locus_tag="PROKKA_00004" - /inference="ab initio prediction:Prodigal:2.60" + /inference="ab initio prediction:Prodigal:2.6" /codon_start=1 /transl_table=11 /product="hypothetical protein" @@ -167,7 +172,7 @@ 421 ggtattaaat ctgccattca aggctctaat gttcctaacc ctgatgaggc cgcccctagt 481 tttgtttctg // -LOCUS contig6 1960 bp DNA linear 11-OCT-2016 +LOCUS contig6 1960 bp DNA linear 21-MAR-2017 DEFINITION Genus species strain strain. ACCESSION VERSION @@ -175,7 +180,8 @@ SOURCE Genus species ORGANISM Genus species Unclassified. -COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. +COMMENT Annotated using prokka 1.12 from + https://github.com/tseemann/prokka. FEATURES Location/Qualifiers source 1..1960 /organism="Genus species" @@ -183,7 +189,7 @@ /strain="strain" CDS 6..767 /locus_tag="PROKKA_00005" - /inference="ab initio prediction:Prodigal:2.60" + /inference="ab initio prediction:Prodigal:2.6" /codon_start=1 /transl_table=11 /product="hypothetical protein" @@ -227,7 +233,7 @@ 1861 tggctaaata cgttaacaaa aagtcagata tggaccttgc tgctaaaggt ctaggagcta 1921 aagaatggaa caactcacta aaaaccaagc tgtcgctact // -LOCUS contig7 276 bp DNA linear 11-OCT-2016 +LOCUS contig7 276 bp DNA linear 21-MAR-2017 DEFINITION Genus species strain strain. ACCESSION VERSION @@ -235,7 +241,8 @@ SOURCE Genus species ORGANISM Genus species Unclassified. -COMMENT Annotated using prokka 1.11 from http://www.vicbioinformatics.com. +COMMENT Annotated using prokka 1.12 from + https://github.com/tseemann/prokka. FEATURES Location/Qualifiers source 1..276 /organism="Genus species"