Mercurial > repos > crs4 > prokka

diff test-data/out.gbk @ 14:eaee459f3d69 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/prokka/ commit 9019ffd38b2b6692fc24c9b41ab2c2539050b01f
author iuc
date Wed, 28 Mar 2018 12:38:42 -0400
parents a17498c603ec
children
line wrap: on
line diff
--- a/test-data/out.gbk	Tue Mar 21 10:13:06 2017 -0400
+++ b/test-data/out.gbk	Wed Mar 28 12:38:42 2018 -0400
@@ -1,4 +1,4 @@
-LOCUS       contig1                  350 bp    DNA     linear       21-MAR-2017
+LOCUS       contig1                  350 bp    DNA     linear       27-MAR-2018
 DEFINITION  Genus species strain strain.
 ACCESSION   
 VERSION
@@ -6,7 +6,7 @@
 SOURCE      Genus species
   ORGANISM  Genus species
             Unclassified.
-COMMENT     Annotated using prokka 1.12 from
+COMMENT     Annotated using prokka 1.13 from
             https://github.com/tseemann/prokka.
 FEATURES             Location/Qualifiers
      source          1..350
@@ -21,7 +21,7 @@
       241 tggcttaata tgcttggcac gttcgtcaag gactggttta gatatgagtc acattttgtt
       301 catggtagag attctcttgt tgacatttta aaagagcgtg gattactatc
 //
-LOCUS       contig2                  840 bp    DNA     linear       21-MAR-2017
+LOCUS       contig2                  840 bp    DNA     linear       27-MAR-2018
 DEFINITION  Genus species strain strain.
 ACCESSION   
 VERSION
@@ -29,7 +29,7 @@
 SOURCE      Genus species
   ORGANISM  Genus species
             Unclassified.
-COMMENT     Annotated using prokka 1.12 from
+COMMENT     Annotated using prokka 1.13 from
             https://github.com/tseemann/prokka.
 FEATURES             Location/Qualifiers
      source          1..840
@@ -37,7 +37,7 @@
                      /mol_type="genomic DNA"
                      /strain="strain"
      CDS             40..498
-                     /locus_tag="PROKKA_00001"
+                     /locus_tag="HMJLFLJH_00001"
                      /inference="ab initio prediction:Prodigal:2.6"
                      /codon_start=1
                      /transl_table=11
@@ -46,7 +46,7 @@
                      ATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAE
                      FTENIINGVERPVKAAELFAFTLRVRAGNTDVLTDAEENVRQKLRAEGVM"
      CDS             498..614
-                     /locus_tag="PROKKA_00002"
+                     /locus_tag="HMJLFLJH_00002"
                      /inference="ab initio prediction:Prodigal:2.6"
                      /codon_start=1
                      /transl_table=11
@@ -68,7 +68,7 @@
       721 agattggtcg tcttattacc atttcaacta ctccggttat cgctggcgac tccttcgaga
       781 tggacgccgt tggcgctctc cgtctttctc cattgcgtcg tggccttgct attgactcta
 //
-LOCUS       contig3                  210 bp    DNA     linear       21-MAR-2017
+LOCUS       contig3                  210 bp    DNA     linear       27-MAR-2018
 DEFINITION  Genus species strain strain.
 ACCESSION   
 VERSION
@@ -76,7 +76,7 @@
 SOURCE      Genus species
   ORGANISM  Genus species
             Unclassified.
-COMMENT     Annotated using prokka 1.12 from
+COMMENT     Annotated using prokka 1.13 from
             https://github.com/tseemann/prokka.
 FEATURES             Location/Qualifiers
      source          1..210
@@ -89,7 +89,7 @@
       121 ttgaccatgc cgcttttctt ggcacgatta accctgatac caataaaatc cctaagcatt
       181 tgtttcaggg ttatttgaat atctataaca
 //
-LOCUS       contig4                 1260 bp    DNA     linear       21-MAR-2017
+LOCUS       contig4                 1260 bp    DNA     linear       27-MAR-2018
 DEFINITION  Genus species strain strain.
 ACCESSION   
 VERSION
@@ -97,7 +97,7 @@
 SOURCE      Genus species
   ORGANISM  Genus species
             Unclassified.
-COMMENT     Annotated using prokka 1.12 from
+COMMENT     Annotated using prokka 1.13 from
             https://github.com/tseemann/prokka.
 FEATURES             Location/Qualifiers
      source          1..1260
@@ -105,7 +105,7 @@
                      /mol_type="genomic DNA"
                      /strain="strain"
      CDS             21..884
-                     /locus_tag="PROKKA_00003"
+                     /locus_tag="HMJLFLJH_00003"
                      /inference="ab initio prediction:Prodigal:2.6"
                      /codon_start=1
                      /transl_table=11
@@ -139,7 +139,7 @@
      1141 taatgctggt aatggtggtt ttcttcattg cattcagatg gatacatctg tcaacgccgc
      1201 taatcaggtt gtttctgttg gtgctgatat tgcttttgat gccgacccta aattttttgc
 //
-LOCUS       contig5                  490 bp    DNA     linear       21-MAR-2017
+LOCUS       contig5                  490 bp    DNA     linear       27-MAR-2018
 DEFINITION  Genus species strain strain.
 ACCESSION   
 VERSION
@@ -147,7 +147,7 @@
 SOURCE      Genus species
   ORGANISM  Genus species
             Unclassified.
-COMMENT     Annotated using prokka 1.12 from
+COMMENT     Annotated using prokka 1.13 from
             https://github.com/tseemann/prokka.
 FEATURES             Location/Qualifiers
      source          1..490
@@ -155,7 +155,7 @@
                      /mol_type="genomic DNA"
                      /strain="strain"
      CDS             275..406
-                     /locus_tag="PROKKA_00004"
+                     /locus_tag="HMJLFLJH_00004"
                      /inference="ab initio prediction:Prodigal:2.6"
                      /codon_start=1
                      /transl_table=11
@@ -172,7 +172,7 @@
       421 ggtattaaat ctgccattca aggctctaat gttcctaacc ctgatgaggc cgcccctagt
       481 tttgtttctg
 //
-LOCUS       contig6                 1960 bp    DNA     linear       21-MAR-2017
+LOCUS       contig6                 1960 bp    DNA     linear       27-MAR-2018
 DEFINITION  Genus species strain strain.
 ACCESSION   
 VERSION
@@ -180,7 +180,7 @@
 SOURCE      Genus species
   ORGANISM  Genus species
             Unclassified.
-COMMENT     Annotated using prokka 1.12 from
+COMMENT     Annotated using prokka 1.13 from
             https://github.com/tseemann/prokka.
 FEATURES             Location/Qualifiers
      source          1..1960
@@ -188,7 +188,7 @@
                      /mol_type="genomic DNA"
                      /strain="strain"
      CDS             6..767
-                     /locus_tag="PROKKA_00005"
+                     /locus_tag="HMJLFLJH_00005"
                      /inference="ab initio prediction:Prodigal:2.6"
                      /codon_start=1
                      /transl_table=11
@@ -233,7 +233,7 @@
      1861 tggctaaata cgttaacaaa aagtcagata tggaccttgc tgctaaaggt ctaggagcta
      1921 aagaatggaa caactcacta aaaaccaagc tgtcgctact
 //
-LOCUS       contig7                  276 bp    DNA     linear       21-MAR-2017
+LOCUS       contig7                  276 bp    DNA     linear       27-MAR-2018
 DEFINITION  Genus species strain strain.
 ACCESSION   
 VERSION
@@ -241,7 +241,7 @@
 SOURCE      Genus species
   ORGANISM  Genus species
             Unclassified.
-COMMENT     Annotated using prokka 1.12 from
+COMMENT     Annotated using prokka 1.13 from
             https://github.com/tseemann/prokka.
 FEATURES             Location/Qualifiers
      source          1..276