Mercurial > repos > curtish > bwa_tools_mini

comparison tool_dependencies.xml @ 0:11eda1d95d84 draft default tip

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clone upstream
author curtish
date Mon, 26 Aug 2013 17:06:46 -0400
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-1:000000000000 0:11eda1d95d84
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="bwa" version="0.5.9">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.9.tar.bz2</action>
7 <action type="shell_command">make</action>
8 <action type="move_file">
9 <source>bwa</source>
10 <destination>$INSTALL_DIR/bin</destination>
11 </action>
12 <action type="set_environment">
13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
14 </action>
15 </actions>
16 </install>
17 <readme>
18 Compiling BWA requires zlib and libpthread to be present on your system.
19 </readme>
20 </package>
21 </tool_dependency>