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Added metaphlan2krona
author Dannon Baker <dannonbaker@me.com>
date Tue, 08 Apr 2014 14:16:46 -0400
parents 73f082e9fa2d
children
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80b22b31633f Updated for MetaPhlAn v1.7 and tool_dependencies added for auto install
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="metaphlan" version="1.7.0">
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4 <install version="1.0">
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5 <actions>
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73f082e9fa2d Set of improvements and fixes from Nicola Soranzo
nsegata
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6 <action type="shell_command">hg clone https://bitbucket.org/nsegata/metaphlan</action>
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7 <action type="move_directory_files">
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8 <source_directory>.</source_directory>
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9 <destination_directory>$INSTALL_DIR</destination_directory>
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10 </action>
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11 <action type="set_environment">
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12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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13 </action>
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14 <action type="set_environment">
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15 <environment_variable name="METAPHLAN_PATH" action="set_to">$INSTALL_DIR</environment_variable>
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16 </action>
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18 </actions>
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19 </install>
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20 <readme>
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21 These links provide information for the metaphlan package:
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22 http://huttenhower.sph.harvard.edu/metaphlan
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23 https://groups.google.com/forum/#!forum/metaphlan-users
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24 </readme>
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25 </package>
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26 </tool_dependency>
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