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comparison report_clonality/naive_clonality.htm @ 18:5d11c9139a55 draft

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author davidvanzessen
date Wed, 21 Dec 2016 11:53:03 -0500
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17:da95be204ebc 18:5d11c9139a55
1 <html>
2
3 <head>
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43 <div class=WordSection1>
44
45 <p class=MsoNoSpacingCxSpFirst style='text-align:justify'><span
46 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>For each donor a
47 subtab is provided containing information on the sequence overlap between
48 replicates of the different replicates of one donor. Dependent on the settings
49 of the Shared clonal types / clonality filter a clonality score is given.  The clonality
50 score  is calculated according to the formula described by </span><a
51 name="OLE_LINK13"></a><a name="OLE_LINK12"></a><a name="OLE_LINK11"><span
52 lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Boyd
53 et al, PMID: 20161664. </span></a></p>
54
55 <p class=MsoNoSpacingCxSpLast style='text-align:justify'><span lang=EN-GB
56 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>For each
57 individual replicate the number of reads is reported. In addition, the number
58 of coincidences between the different replicates of the same donor are reported.
59 </span></p>
60
61 <p class=MsoNormal>&nbsp;</p>
62
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