Mercurial > repos > davidvanzessen > argalaxy_tools

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<p class=MsoNoSpacingCxSpFirst style='text-align:justify'><span
style='font-size:12.0pt;font-family:"Times New Roman","serif"'>For each donor a
subtab is provided containing information on the sequence overlap between
replicates of the different replicates of one donor. Dependent on the settings
of the Shared clonal types / clonality filter a clonality score is given.  The clonality
score  is calculated according to the formula described by </span><a
name="OLE_LINK13"></a><a name="OLE_LINK12"></a><a name="OLE_LINK11"><span
lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Boyd
et al, PMID: 20161664. </span></a></p>

<p class=MsoNoSpacingCxSpLast style='text-align:justify'><span lang=EN-GB
style='font-size:12.0pt;font-family:"Times New Roman","serif"'>For each
individual replicate the number of reads is reported. In addition, the number
of coincidences between the different replicates of the same donor are reported.
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<p class=MsoNormal>&nbsp;</p>

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author	davidvanzessen
date	Wed, 21 Dec 2016 11:53:03 -0500
parents
children	4d2a8f98a502