Mercurial > repos > davidvanzessen > argalaxy_tools
comparison igparse.xml @ 6:d001d0c05dbe draft
Uploaded
| author | davidvanzessen |
|---|---|
| date | Fri, 16 Dec 2016 07:30:32 -0500 |
| parents | afe85eb6572e |
| children |
comparison
equal
deleted
inserted
replaced
| 5:bcec7bb4e089 | 6:d001d0c05dbe |
|---|---|
| 1 <tool id="igblastparser_igg" name="igBLASTparser" version="0.2.0"> | |
| 2 <description> </description> | |
| 3 <command interpreter="perl"> | |
| 4 igblastparser/igparse.pl $input 0 2>/dev/null | grep -v "D:" | cut -f2- > $output | |
| 5 </command> | |
| 6 <inputs> | |
| 7 <param name="input" type="data" format="text" label="igBLASTn report"/> | |
| 8 </inputs> | |
| 9 <outputs> | |
| 10 <data name="output" format="tabular" label="${input.name}-parsed" /> | |
| 11 </outputs> | |
| 12 <help> | |
| 13 Step 2 of the Immune Repertoire tools, extracts the relevant information needed from the reports generated by igblast (Step 1) | |
| 14 </help> | |
| 15 </tool> |