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annotate 1_Summary.txt @ 94:84e9e5c8c101 draft

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"planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
author rhpvorderman
date Fri, 24 Mar 2023 16:58:28 +0000
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94
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
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1 Sequence number Sequence ID V-DOMAIN Functionality V-GENE and allele V-REGION score V-REGION identity % V-REGION identity nt V-REGION identity % (with ins/del events) V-REGION identity nt (with ins/del events) J-GENE and allele J-REGION score J-REGION identity % J-REGION identity nt D-GENE and allele D-REGION reading frame CDR1-IMGT length CDR2-IMGT length CDR3-IMGT length CDR-IMGT lengths FR-IMGT lengths AA JUNCTION JUNCTION frame Orientation V-DOMAIN Functionality comment V-REGION potential ins/del J-GENE and allele comment V-REGION insertions V-REGION deletions Sequence 5prime trimmed-n nb 3prime trimmed-n nb Analysed sequence length Sequence analysis category
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
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diff changeset
2 1 M01495:47:000000000-JFBTW:1:1102:9194:4681_1:N:0: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD6-19*01 F 1 8 7 18 8.7.18 [3.17.38.11] CARGTDSSGWYFVLRAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggaccgatagcagtggctggtactttgtcttacgtgcttttgatatctggggccaagggacaatgttcaccgtcgcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
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3 2 M01495:47:000000000-JFBTW:1:1102:4906:4844_1:N:0: productive Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-12*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARGVTVATISPFGYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggttttatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagaggggttacggtggctacaattagcccctttggatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
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diff changeset
4 3 M01495:47:000000000-JFBTW:1:1102:9591:5411_1:N:0: productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 9 7 17 9.7.17 [3.17.38.11] CARDFRRYYDSSGSYVDYW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagatttccgtcgttactatgatagtagtggttcctatgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
5 4 M01495:47:000000000-JFBTW:1:1102:8366:6267_1:N:0: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 980 93.27 208/223 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-15*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARGYCSGGSCYSLYYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggtgtgggtctcacgtattaatagtgacgggagtaccacaagctacgcggacttcgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggatattgtagtggtggtagctgctactcgctttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
6 5 M01495:47:000000000-JFBTW:1:1102:13215:6515_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARDRSDGWFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgttcggatggttggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
7 6 M01495:47:000000000-JFBTW:1:1102:17003:6688_1:N:0 productive Homsap IGHV1-8*01 F 1014 95.89 210/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARENSGSYLEIDYW in-frame + gcttctggatacaccttcaccagtcatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagaatagtgggagctacttggaaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
8 7 M01495:47:000000000-JFBTW:1:1102:23370:7403_1:N:0 productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-6*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDVSSSWGSFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacgcggctgtttattactgtgcgagagatgtttccagctcgtggggctcgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
9 8 M01495:47:000000000-JFBTW:1:1102:28961:8810_1:N:0 productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD5-12*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARDSGYDYIGYYYYMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagggatagtggctacgattacattggctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
10 9 M01495:47:000000000-JFBTW:1:1102:14784:9156_1:N:0 productive Homsap IGHV3-7*03 F 1070 97.76 218/223 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 160 80.00 40/50 nt Homsap IGHD1-26*01 F 1 8 8 8 8.8.8 [3.17.38.11] CVRDKVGACW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagaaactattggatgacctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtttctgcaaatgaacagcctgagagccgaggacacggccgtgtatttctgtgtgagagataaggtgggagcctgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
11 10 M01495:47:000000000-JFBTW:1:1102:16981:9860_1:N:0 productive Homsap IGHV3-7*03 F 1079 98.21 219/223 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-10*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAREKSVARGGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagtagctattggatgtgctgggttcgccaggcaccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggcctctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagggagaaatccgtggcccgggggggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
12 11 M01495:47:000000000-JFBTW:1:1102:27075:11310_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD5-18*01 F 3 8 8 19 8.8.19 [2.17.38.11] CARDRRYSYGKDLSPCGMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcggagatacagctatggtaaagatctaagtccttgcggtatggacgtctggggccaagggaccacggtcaccgcctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
13 12 M01495:47:000000000-JFBTW:1:1102:8022:11357_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARGRGAVAGRFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggcggggagcagtggctggacggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
14 13 M01495:47:000000000-JFBTW:1:1102:9646:12659_1:N:0 productive Homsap IGHV1-45*02 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-1*01 F 1 8 8 11 8.8.11 [2.17.38.11] CASKGRTDAFDIW in-frame + gcttccggatacaccttcacctaccgctacctgcactgggtgcgacaggcccccggacaagcgcttgagtggatgggatggatcacacctttcaatggtaacaccaactacgcacagaaattccaggacagagtcaccattaccagggacaggtctatgagcacagcctacatggagctgagcagcctgagatctgaggacacagccatgtattactgtgcaagtaaagggaggactgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
15 14 M01495:47:000000000-JFBTW:1:1102:17966:13001_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtggtagtggtggtaccacacactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
16 15 M01495:47:000000000-JFBTW:1:1102:11807:13387_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD6-6*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARDRVHSSSSICMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgagtgcatagcagctcgtccatatgtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
17 16 M01495:47:000000000-JFBTW:1:1102:6490:14138_1:N:0 productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-17*01 F 3 8 8 19 8.8.19 [2.17.38.11] CASSPRGVTTWGDYYYYMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagctcccctcgcggggtgactacgtggggagactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
18 17 M01495:47:000000000-JFBTW:1:1102:23544:14892_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 962 92.38 206/223 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKGQIGTYVVFDIW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaggggccggttcagcatctccagagacaattccaggaacacagtgtttttgcaaatgaatagcctgagagccgaggacacggccatttatcactgtgcgaaaggccagattgggacctacgtcgtgtttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
19 18 M01495:47:000000000-JFBTW:1:1102:29236:15050_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 205 90.00 45/50 nt Homsap IGHD4-23*01 ORF 2 8 8 8 8.8.8 [2.17.38.11] CARGDGGDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgacggcggcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcaaccgccccaccccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
20 19 M01495:47:000000000-JFBTW:1:1102:21000:15162_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1073 98.64 217/220 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD3-9*01 F 2 8 7 11 8.7.11 [3.17.38.11] CARRKTGYWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattatagtgggagcaccaactacaacccttccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgcgctctgtgaccgctgcggacacggccgtgtattactgtgcgagacgcaagactggttactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
21 20 M01495:47:000000000-JFBTW:1:1102:14819:15847_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 8 8 8.8.8 [3.17.38.11] CARASSGDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagctagcagtggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
22 21 M01495:47:000000000-JFBTW:1:1102:8944:16097_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-16*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARGALSDYSTYYYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgctctttctgactactcaacctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
23 22 M01495:47:000000000-JFBTW:1:1102:7824:17280_1:N:0 productive Homsap IGHV4-4*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 3 8 7 15 8.7.15 [3.17.38.11] CARRSGSGSYSTPFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccgccgggaagggactggagtggattgggcgtatctataccagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaaggtctgggagtgggagctactctacaccgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
24 23 M01495:47:000000000-JFBTW:1:1102:25893:17527_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-10*01 F 2 8 8 12 8.8.12 [3.17.38.11] CATTVGGSDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgacgaccgtcggtggttcggatgcttttgatatctggggccaagagacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
25 24 M01495:47:000000000-JFBTW:1:1102:17807:18307_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD3-16*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARLAVLGHYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagattagccgttctggggcactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
26 25 M01495:47:000000000-JFBTW:1:1102:8540:18953_1:N:0 productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD7-27*01 F 1 10 7 15 10.7.15 [3.17.38.11] CARDGRGTGDQYAFDIW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagacggtcgtgggactggggatcagtacgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
27 26 M01495:47:000000000-JFBTW:1:1102:27342:19689_1:N: productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 7 19 8.7.19 [3.17.38.11] CASEYYYDSSGYYGSMSFNYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagcgagtattactatgatagtagtggttattacggcagtatgtcctttaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
28 27 M01495:47:000000000-JFBTW:1:1102:25946:20495_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-15*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARVLDYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcgcctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgatagcagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagtgttggactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
29 28 M01495:47:000000000-JFBTW:1:1102:25170:20585_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD7-27*01 F 1 8 8 17 8.8.17 [3.17.38.11] CARGWGLITGDVHDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggggatggggattaataactggggatgttcatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
30 29 M01495:47:000000000-JFBTW:1:1102:20292:21460_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD4-23*01 ORF 3 8 8 15 8.8.15 [3.17.38.11] CARTTVVTQSMDYVDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggcagattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagtcgaggacacggccgtgtattactgtgcgagaactacggtggtaactcaaagtatggactacgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
31 30 M01495:47:000000000-JFBTW:1:2114:8633:1335_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt Homsap IGHJ6*03 F (see comment) 301 98.39 61/62 nt Homsap IGHD3-22*01 F 2 8 8 25 8.8.25 [3.17.38.11] CARHSTYYYDSSGYQTNYYYYYYMDIW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) aagggttctggatacagctttaccagctactggatctgctgggtgcgccagatgcccgggaaaggcccggagtggatggggaacatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacatcgccatgtattactgtgcgagacactcaacgtattactatgatagtagtggttaccagacgaattactactactactactacatggacatctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 392 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
32 31 M01495:47:000000000-JFBTW:1:2114:14139:1455_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD7-27*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARDPNWGPDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatccaaactggggacccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
33 32 M01495:47:000000000-JFBTW:1:2114:9278:1992_1:N:0: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD5-12*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARPEGILWTYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgcggccggaggggatattgtggacctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
34 33 M01495:47:000000000-JFBTW:1:2114:11850:2153_1:N:0 unproductive (see comment) Homsap IGHV4-31*01 F 1130 100.00 226/226 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD1-7*01 F 2 10 7 16 10.7.16 [3.17.38.11] CARGWR*LELHVNWFDPW in-frame + rearranged sequence, stop codons cactgtctctggtggctccatcagcagtggtggttactactggagctggatccgccagcacccagggaagggcctggagtggattgggtacatctattacagtgggagcacctactacaacccgtccctcaagagtctagttaccatatcagtagacacgtctaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcgagaggatggagataactggaactacatgtcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
35 34 M01495:47:000000000-JFBTW:1:2114:24209:2253_1:N:0 productive Homsap IGHV4-59*12 (F) (see comment) 1091 99.55 219/220 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD2-2*01 F 3 8 7 17 8.7.17 [3.17.38.11] RAREVGPAATPSHPWFDPW in-frame + 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattaccgtgcgagggaggtaggaccagctgctactccatcccatccgtggttcgacccctggggccagggagccctggtcaccgtctccccagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
36 35 M01495:47:000000000-JFBTW:1:2114:21800:2538_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 7 14 8.7.14 [3.17.38.11] CARDRGSSGWYTLNYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatcggggtagcagtggctggtacaccctaaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
37 36 M01495:47:000000000-JFBTW:1:2114:17433:3200_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-15*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARTGRSAGYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaactggacgtagcgcggggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
38 37 M01495:47:000000000-JFBTW:1:2114:22959:3407_1:N:0 No rearrangement found Homsap IGHV1-8*01 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatggaccacctcgtctcctgtgagaattcccctcgcgatat 0 0 265 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
39 38 M01495:47:000000000-JFBTW:1:2114:24190:4186_1:N:0 productive Homsap IGHV4-59*12 (F) 1091 99.55 219/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARGDYYGSGFPDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggggactactatggttcgggcttcccagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
40 39 M01495:47:000000000-JFBTW:1:2114:13069:4325_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1135 100.00 227/227 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [4.17.38.11] CAREGYCSGGTCYSNFDYW in-frame + cctgtaagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggaaggctattgtagtggtggtacctgctactctaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
41 40 M01495:47:000000000-JFBTW:1:2114:5957:4390_1:N:0: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD5-18*01 F 3 8 7 16 8.7.16 [3.17.38.11] CARRNSYGYYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagacgtaacagctatggttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
42 41 M01495:47:000000000-JFBTW:1:2114:16302:4519_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1068 98.63 216/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [2.17.38.11] CAKAGYCSSTSCPLAAFDIW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtatatcactgcgcgaaagcgggatattgtagtagtaccagctgcccgctggccgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
43 42 M01495:47:000000000-JFBTW:1:2114:14868:4698_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-24*01 ORF 1 8 8 12 8.8.12 [2.17.38.11] CAREAKTSNYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggctaaaacatcgaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
44 43 M01495:47:000000000-JFBTW:1:2114:19368:5550_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ1*01 F, or Homsap IGHJ3*02 F or Homsap IGHJ4*02 F or Homsap IGHJ5*02 F (see comment) 132 75.00 36/48 nt Homsap IGHD4-23*01 ORF 2 8 7 7 8.7.7 [3.17.38.11] CARAGGRIW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagctggtggtcggatctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
45 44 M01495:47:000000000-JFBTW:1:2114:10965:5784_1:N:0 unproductive (see comment) Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1010 95.45 210/220 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARGRGDYGD*YRFDYW in-frame + rearranged sequence, stop codons other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtccttcagtgattactactggacctggatccgccagcccccagggaagggactggagtggattggggaaatcaatcatagtggagacaccaagtgcaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaacttgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgaggtgactacggtgactaatatcgctttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
46 45 M01495:47:000000000-JFBTW:1:2114:18219:6440_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-13*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARVAGAAAGHNFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagtggccggggcagcagctggtcacaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
47 46 M01495:47:000000000-JFBTW:1:2114:21307:6590_1:N:0 productive Homsap IGHV3-72*01 F 1109 98.25 225/229 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 10 20 8.10.20 [3.17.38.11] CARWVLGYCSGGSCYGGYFDYW in-frame + tgcagcctctggattcaccttcagtgaccagtatatggactgggtccgccaggctccagggaaggggctggagtgggttggccgtattagaaacaaagctaacagttacaccacagaatacgccgcgtctgtgaaagacagattcaccatctcaagagatgattcaaagaactcactgtatctgcaaatgaacagcctgaaaaccgaggacacggccgtgtattactgtgctagatgggtcttaggatattgtagtggtggtagctgctacgggggctactttgactactggggccagggaacccaggtcaccatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
48 47 M01495:47:000000000-JFBTW:1:2114:19102:6595_1:N:0 productive Homsap IGHV4-38-2*01 F 1132 99.13 228/230 nt Homsap IGHJ4*01 F, or Homsap IGHJ4*03 F 150 79.17 38/48 nt Homsap IGHD3-9*01 F 2 9 7 7 9.7.7 [5.17.38.11] CLKDYQGDW in-frame + tcacctgcgctgtctctggttactccatcagaagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggaacacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtttgaaggattaccagggggactggggccaagggacagtggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 315 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
49 48 M01495:47:000000000-JFBTW:1:2114:10913:6755_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1020 95.50 212/222 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD4-11*01 ORF 2 8 8 23 8.8.23 [3.17.38.11] CARHRVPPGKTYSKHLEIYYGMDVW in-frame + cagggttctggatacagctttacctactactggatctgcttggttcgccagctgcccgggaaaggcctggagtggatgtggatcttctatcctggtgactctgataccagatacagcccgtccttcccaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaccgtgttccccccgggaagacctacagtaaacatctggagatctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
50 49 M01495:47:000000000-JFBTW:1:2114:13978:6909_1:N:0 productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1007 94.62 211/223 nt Homsap IGHJ1*01 F (see comment) 161 78.85 41/52 nt Homsap IGHD3-10*01 F 3 8 8 9 8.8.9 [3.17.38.11] CVRDSWGIHHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtaactactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacagattaatagtgatgggagtaacacaaactacgcggactccgtgaagggccgattaaccatctccagagacaacgccaagaacacgctgtatctgcaggtgaacaatctgagagtagaggacacggctgtatattactgtgtaagggactcttggggaattcatcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
51 50 M01495:47:000000000-JFBTW:1:2114:20874:6936_1:N:0 productive Homsap IGHV1-8*01 F 1050 97.72 214/219 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt Homsap IGHD7-27*01 F 1 8 8 12 8.8.12 [2.17.38.11] CAAVLSGNWWFDLW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcggctgtcctaagtgggaactggtggttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
52 51 M01495:47:000000000-JFBTW:1:2114:5302:7234_1:N:0: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 205 90.00 45/50 nt 8 8 8 8.8.8 [2.17.38.11] CARGYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcaggctgagatcagacgacacggccgtctattattgtgcgagaggttacggcatggacgtctggggccaagggaccacagccaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
53 52 M01495:47:000000000-JFBTW:1:2114:14919:7492_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARGRQGAFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggtcgtcagggagcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
54 53 M01495:47:000000000-JFBTW:1:2114:23354:7866_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARGGKGSTSPLDFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcgggaagggtagtaccagccccttagattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
55 54 M01495:47:000000000-JFBTW:1:2114:10928:8128_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD2-8*02 F 2 8 8 17 8.8.17 [3.17.38.11] CARQPTGDKGYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagcctacaggtgataaaggctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
56 55 M01495:47:000000000-JFBTW:1:2114:4116:8288_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-16*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARHDSAGEWLFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagcagacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgattcggctggggagtggctttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcgtccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
57 56 M01495:47:000000000-JFBTW:1:2114:8381:9107_1:N:0: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 183 84.31 43/51 nt Homsap IGHD6-13*01 F 3 8 8 9 8.8.9 [2.17.38.11] CARGVQLLDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagcgcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggggtgcagctgctggacccctggggccagggaaccctggtcaccgtctcctcagggggtgaatccgccccaacccttttgcccctcgtctccggtgggaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
58 57 M01495:47:000000000-JFBTW:1:2114:10555:9479_1:N:0 unproductive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD6-19*01 F 3 8 8 X 8.8.X [2.17.38.11] CARDSVAGT#NWFDPW out-of-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagactcagtggctggtacaaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
59 58 M01495:47:000000000-JFBTW:1:2114:16548:9731_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD2-8*02 F 2 8 7 13 8.7.13 [3.17.38.11] CARVAGGTFGGVDQW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagttgcgggaggaacgtttgggggtgtcgaccagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
60 59 M01495:47:000000000-JFBTW:1:2114:7063:9925_1:N:0: productive Homsap IGHV3-21*07 (F), or Homsap IGHV3-48*04 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARAYCSSTSCYLGYW in-frame + tgcagcgtctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatacattggtagtagtggcaataccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagggcttattgtagtagtaccagctgctatttgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
61 60 M01495:47:000000000-JFBTW:1:2114:11799:10153_1:N: productive Homsap IGHV1-8*01 F 1059 98.17 215/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 3 8 8 20 8.8.20 [2.17.38.11] CASGDIVVVPAARFYYYYMDVW in-frame + gcttctggatacatcttcaccagttatgatatcaactgggttcgacaggccactggacaaaggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggccacggccgtgtattactgtgcgagtggggatattgtagtagtaccagctgctcgtttttactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
62 61 M01495:47:000000000-JFBTW:1:2114:27078:11392_1:N: productive Homsap IGHV3-48*03 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARGGAAAGRGFDYW in-frame + tgcagcctctggattcacctttagtaattattggatgagttgggtccgccgggctccagggaaggggctggagtgggtttcatacattatcagtagtggtagtatcatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagggggagcagcagctggcagggggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
63 62 M01495:47:000000000-JFBTW:1:2114:13619:12341_1:N: productive Homsap IGHV4-34*03 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD2-8*01 F 1 8 7 12 8.7.12 [3.17.38.11] CARGSMRYGVGDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagggtctatgaggtacggtgtgggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
64 63 M01495:47:000000000-JFBTW:1:2114:25201:12436_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-6*01 F 1 8 7 20 8.7.20 [3.17.38.11] CARDFTDSSSSGLLYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattttacggatagcagctcgtccggactcctctactactacggtatggacgtctggggccaagggaccacggtcaccggctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
65 64 M01495:47:000000000-JFBTW:1:2114:4700:12561_1:N:0 productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-10*01 F 1 8 8 14 8.8.14 [2.17.38.11] CATQDRFGVYYAFDIW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacccaagacaggttcggggtgtactatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
66 65 M01495:47:000000000-JFBTW:1:2114:6821:13084_1:N:0 productive Homsap IGHV3-7*01 F 935 91.03 203/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARWGPFGDIDYW in-frame + tgcagcctctggatacacctttaatgatttttggatgagttgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatgggagtacaaagtactacatggactctgtgaagggccgattcaccgtctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagcgccgacgacacggctatctattactgtgcgagatgggggcccttcggggacattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccaccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
67 66 M01495:47:000000000-JFBTW:1:2114:25012:13850_1:N: No rearrangement found Homsap IGHV1-2*04 F 1086 99.54 218/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 278 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
68 67 M01495:47:000000000-JFBTW:1:2114:8254:13906_1:N:0 productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARVGGWDCSSTSCYGPFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtaggggggtgggattgtagtagtaccagctgctatggaccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
69 68 M01495:47:000000000-JFBTW:1:2114:16922:13976_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD1-14*01 ORF 1 8 8 13 8.8.13 [2.17.38.11] CARDCQPGTSAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattgccagcccggtaccagtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
70 69 M01495:47:000000000-JFBTW:1:2114:18516:14886_1:N: productive (see comment) Homsap IGHV4-61*01 F, or Homsap IGHV4-61*08 F 1043 96.41 215/223 nt 95.96 214/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-10*01 F 2 9 7 20 9.7.20 [3.17.38.11] CARGPRYYYGSGEPYYYYMDVW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 36 of V-REGION: 3 nucleotides (from position 32 in the user submitted sequence), (do not cause frameshift) cgctgtctctccttactccatcaccattggttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggccctcggtattactatggttcgggtgaaccctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
71 70 M01495:47:000000000-JFBTW:1:2114:16285:15568_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARGDMDTIFGVDFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggggatatggatacgatttttggagtggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
72 71 M01495:47:000000000-JFBTW:1:2114:21088:15691_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CATTYYYDSSGLFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgacaacgtattactatgatagtagtggcctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
73 72 M01495:47:000000000-JFBTW:1:2114:3510:16331_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 2 8 8 9 8.8.9 [3.17.38.11] CAKGGYDTDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaactattagtggtggcgatggtagcacatactacccagactccgtgaagggccggctcaccatctccagagacaattccaagaacacggtgtatctgcaaatgaacagcctgagagccgaagacacggccgtatattactgtgcgaaaggtggttacgacactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
74 73 M01495:47:000000000-JFBTW:1:2114:10754:17766_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-14*01 ORF 3 8 8 11 8.8.11 [3.17.38.11] CARDPRKYYFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagacccgcggaaatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
75 74 M01495:47:000000000-JFBTW:1:2114:8776:17806_1:N:0 productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARDLKVLGAFDIW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagacttaaaggtccttggagcttttgatatctggggccaagggacaatggtcaccatctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
76 75 M01495:47:000000000-JFBTW:1:2114:3238:18118_1:N:0 unproductive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 8 8 X 8.8.X [3.17.38.11] CAKGKEQWLV*#DYW out-of-frame + rearranged sequence, stop codons tgcagcctctggatccacctttagtagctatgccattagctgggtccgccaggctccagggaaggggctggagttggtctcaggtattagtggtagtggtagtagcacatactacgcagactccgtgaagggccggttcaccatcaccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggaaggagcagtggctggtatagtgactactggggccagggaaccctggtcaccgtctccgcagggagtgcatccgccacaacccttttccccctcgactcctgtgagaattcccctcgcgatat 0 0 355 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
77 76 M01495:47:000000000-JFBTW:1:2114:14880:18543_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1055 97.73 215/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-16*01 F 3 8 7 11 8.7.11 [3.17.38.11] CARGPGGQGFDYW in-frame + tgcagcctctgggttcagcgtcagtagcaactacatgagctgggtccgccagactccagggaaggggctggagtgggtctcagttatgtatagcggtggtagcacatactacgcagactccgtgaagggccgatccaccatctccagagacaattccaagaacacgctgtatctacaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagggcccgggggacaaggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctggagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
78 77 M01495:47:000000000-JFBTW:1:2114:24819:18806_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 175 75.81 47/62 nt Homsap IGHD2-2*02 F 3 8 8 17 8.8.17 [2.17.38.11] CAGIVVVPAAILYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcggggattgtagtagtaccagctgctatactctactacggtatggacgtctggggccaggggtccacggtctctgactactcaggttgtgcttccgccccaacccttttccccctcgacacctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
79 78 M01495:47:000000000-JFBTW:1:2114:5451:19374_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARSSHWELLFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatcctcacactgggagctactttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
80 79 M01495:47:000000000-JFBTW:1:2114:17193:19701_1:N: unproductive (see comment) Homsap IGHV4-34*03 F 1068 98.63 216/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-22*01 F 2 8 7 18 8.7.18 [3.17.38.11] CASSPDDSSGYYHWGWFDPW in-frame + rearranged sequence, stop codons cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccacggtaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctcccttaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagctcccctgatgatagtagtggttattaccattggggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
81 80 M01495:47:000000000-JFBTW:1:2114:4390:20351_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD7-27*01 F 3 8 8 8 8.8.8 [3.17.38.11] CVKGDWGDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtgacaatggtggtaacacatactacgcagactccgtgaagggccggttcaccatctccagagacagctccaagaacacactgtatctgcaaatgaacagcctgagagtcgaggacacggccgtatattactgtgtgaaaggggactggggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccaccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
82 81 M01495:47:000000000-JFBTW:1:2114:9216:20395_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-9*01 F 2 8 8 11 8.8.11 [3.17.38.11] CAAGLYGYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcggctggtttgtatgggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
83 82 M01495:47:000000000-JFBTW:1:2114:6850:20548_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1077 99.09 217/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD1-26*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARVPQSEPRDYYYYYMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtaccccagtcggagccccgcgactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
84 83 M01495:47:000000000-JFBTW:1:2114:16678:20923_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-23*01 ORF 3 10 7 12 10.7.12 [3.17.38.11] CARRSTGGDYFDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaaggtccacggggggggactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
85 84 M01495:47:000000000-JFBTW:1:2114:20701:21033_1:N: productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD4-17*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARESTVTTDYW in-frame + gcttctggatacacgttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaaagtacggtgactactgactactggggccagggaaccctggttaccctctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
86 85 M01495:47:000000000-JFBTW:1:2114:16580:21916_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD6-6*01 F 1 8 8 14 8.8.14 [3.17.38.11] CASGRSSSFNWYFDLW in-frame + aagggttctggatacagttttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagcgggcgcagctcgtctttcaactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
87 86 M01495:47:000000000-JFBTW:1:2114:17140:22225_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARLRGCSSTSCYDYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagattgaggggatgtagtagtaccagctgctatgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctactcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
88 87 M01495:47:000000000-JFBTW:1:2114:13278:22533_1:N: No rearrangement found Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaatggtggtagctgcctcgtctcctgtgagaattcccctcgcgatat 0 0 271 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
89 88 M01495:47:000000000-JFBTW:1:2114:8257:23419_1:N:0 productive Homsap IGHV4-61*02 F 1103 98.67 223/226 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 1 10 7 13 10.7.13 [3.17.38.11] CARGFGSSWYEEGYW in-frame + cactgtctctggtggctccatcagcagtggtaattactactggagctggatccggcagcccgccgggaagggactggagtggattgggcgtatctataccagtgggagcaccaactacaacccctccctcaggagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaacctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagaggattcggcagcagctggtacgaggaaggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
90 89 M01495:47:000000000-JFBTW:1:2114:12314:23570_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-3*01 F 3 8 8 9 8.8.9 [2.17.38.11] CAREDGAVGYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggacggagcggttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
91 90 M01495:47:000000000-JFBTW:1:2114:18980:24421_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ3*01 F (see comment) 151 78.00 39/50 nt Homsap IGHD3-10*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKDLDTLVRGVADVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) tgaagcctctggactcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcacctattagtggtagtggtgatactatatattacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgagcagcctgagagccgaggacacggccatatattactgtgcgaaagatctggatactctggttcggggagttgcggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcctccgccccaacccttttccccctcgtcttctgcgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
92 91 M01495:47:000000000-JFBTW:1:2114:11384:24614_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 836 96.63 172/178 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 3 X 8 15 X.8.15 [X.13.38.11] CAKNPNRVVRGVNPDYW in-frame + ccgccaggctccagggaaggggctggagtgggtctcaggtataagtggtagtggcgctagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaaccccaatcgggtggttcggggagttaaccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 287 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
93 92 M01495:47:000000000-JFBTW:1:2114:16544:24835_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ6*03 F (see comment) 256 90.32 56/62 nt Homsap IGHD7-27*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARGHLGYYYYMGVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgaccgctgtgaccgctgcggacacggccgtgtattactgtgcgagaggtcacttgggctactactactacatgggcgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
94 93 M01495:47:000000000-JFBTW:1:2114:14643:24893_1:N: productive Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 3 8 8 8 8.8.8 [3.17.38.11] CARQGGFDYW in-frame + tgcagcctctggattcactttcagtagctatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtggtaacatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagacaggggggatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
95 94 M01495:47:000000000-JFBTW:1:2115:8617:1787_1:N:0: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 969 93.61 205/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-14*01 ORF 2 8 8 10 8.8.10 [2.17.38.11] CARVSAPGFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctagtggtggtagcacaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtttcggcaccaggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
96 95 M01495:47:000000000-JFBTW:1:2115:22301:1960_1:N:0 productive Homsap IGHV4-61*01 F 1094 98.23 222/226 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD2-2*01 F 2 10 7 22 10.7.22 [3.17.38.11] CARGRIYCSSTSCYNHYYYYMDVW in-frame + cactgtctctggtggctccgttagcagtggcagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggtcgcatatattgtagtagtaccagctgctataaccactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
97 96 M01495:47:000000000-JFBTW:1:2115:23271:2587_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARAYVDTAMVPPFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcctacgtggatacagctatggtccccccgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
98 97 M01495:47:000000000-JFBTW:1:2115:11532:2655_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD3-10*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARHVHRAGSGSGSNYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtacatcgtgcgggatctggttcggggagcaactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
99 98 M01495:47:000000000-JFBTW:1:2115:22926:2664_1:N:0 No rearrangement found Homsap IGHV1-8*03 F 978 94.06 206/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagagctgatccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 282 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
100 99 M01495:47:000000000-JFBTW:1:2115:20318:3324_1:N:0 unproductive (see comment) Homsap IGHV1-18*01 F 1014 95.89 210/219 nt Homsap IGHJ1*01 F 242 96.15 50/52 nt Homsap IGHD6-19*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARGMLPWAVAGIYWGEYFQHW in-frame + rearranged sequence, stop codons gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggatgcttccatgggcagtggctggtatatattggggtgaatacttccagcactggggctagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
101 100 M01495:47:000000000-JFBTW:1:2115:23404:3652_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARHLPYYDSSGYYGNWGFGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatttgccttactatgatagtagtggttattacggaaactggggttttgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
102 101 M01495:47:000000000-JFBTW:1:2115:25215:3667_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD2-2*01 F 3 8 7 18 8.7.18 [3.17.38.11] CATGSDIVVVPAARNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgactggatcggatattgtagtagtaccagctgctcgcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
103 102 M01495:47:000000000-JFBTW:1:2115:23258:3724_1:N:0 No rearrangement found Homsap IGHV4-61*01 F 1130 100.00 226/226 nt 10 7 X 10.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagatagcggtgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 301 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
104 103 M01495:47:000000000-JFBTW:1:2115:9311:4083_1:N:0: productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1115 100.00 223/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD5-12*01 F 3 9 7 18 9.7.18 [3.17.38.11] CATPGPRGYDLYYYYGMDVW in-frame + cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgacccccggcccccgtggctacgatttatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
105 104 M01495:47:000000000-JFBTW:1:2115:24867:4700_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD7-27*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARDPGAYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggcctcagctattagtggtagtggtggtagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcctggggcctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
106 105 M01495:47:000000000-JFBTW:1:2115:22325:5408_1:N:0 productive Homsap IGHV1-18*01 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [2.17.38.11] CAKYGDYVGGGDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaagtacggtgactacgtagggggaggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
107 106 M01495:47:000000000-JFBTW:1:2115:26391:5613_1:N:0 productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 3 8 8 8 8.8.8 [3.17.38.11] CARFEGLDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagatttgaaggccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
108 107 M01495:47:000000000-JFBTW:1:2115:20808:5694_1:N:0 productive Homsap IGHV3-7*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F (see comment) 186 87.50 42/48 nt Homsap IGHD5-12*01 F 1 8 8 15 8.8.15 [3.17.38.11] CSREVHIMATTGVFDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcgagatggaagtgagatattctatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcattgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgttcgagagaagtccacataatggctacgaccggggtttttgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
109 108 M01495:47:000000000-JFBTW:1:2115:12477:6081_1:N:0 productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1050 97.72 214/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-6*01 F 2 8 8 13 8.8.13 [2.17.38.11] CASIAARPGYYFDYW in-frame + gcttctggatacaccttcactagttatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaacggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgaccacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcatagcagctcgtccagggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
110 109 M01495:47:000000000-JFBTW:1:2115:13416:6216_1:N:0 productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1025 95.52 213/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 3 8 8 12 8.8.12 [3.17.38.11] CATDPGYSYGFGYW in-frame + tgcagcctctggatttaccttcagtagctactggatgcactgggtccgccacgctccagggaaggggctggtgtgggtctcacgtattcatagtgatgggagtacaacaaactacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaatacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtctattactgtgcgacagatcccggatacagctatgggtttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatctgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
111 110 M01495:47:000000000-JFBTW:1:2115:6207:6491_1:N:0: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 2 8 7 17 8.7.17 [3.17.38.11] CARVDYYGSGRGGYYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtcgattactatggttcggggagagggggttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
112 111 M01495:47:000000000-JFBTW:1:2115:7329:6839_1:N:0: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARQGSGSYYLGTPYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacagggttcggggagttattatctgggaaccccctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
113 112 M01495:47:000000000-JFBTW:1:2115:24606:6913_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 787 98.76 159/161 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD1-1*01 F 3 X 8 12 X.8.12 [X.7.38.11] CARSSWNDGWFDPW in-frame + aggggctggagtgggtctcatccattagtagtagtagtagttacatatactccgcagagtcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagatcctcctggaacgacggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 261 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
114 113 M01495:47:000000000-JFBTW:1:2115:8945:8209_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARQGYSYAFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagggatacagctatgcatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
115 114 M01495:47:000000000-JFBTW:1:2115:10004:8462_1:N:0 productive Homsap IGHV3-7*03 F 1025 95.52 213/223 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARLGGQTGNWYFDLW in-frame + tgcagcctctggattcacctttagaaactatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaatgaagatggaagtgagaaacactatgtggactctgtgaggggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgaggctaggagggcaaactgggaactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
116 115 M01495:47:000000000-JFBTW:1:2115:8824:8882_1:N:0: productive Homsap IGHV1-2*02 F 896 99.45 180/181 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD6-6*01 F 1 X 8 20 X.8.20 [X.14.38.11] CARDFEDGSSSDTGYYYGMDVW in-frame + ggtgcgacaggcccctggacaagggcttgagtggatggtatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagattttgaggacggcagctcgtcagacacgggctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 305 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
117 116 M01495:47:000000000-JFBTW:1:2115:12581:9982_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDRSIAASWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcggagcatagcagcatcttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
118 117 M01495:47:000000000-JFBTW:1:2115:18070:11515_1:N: productive Homsap IGHV3-48*03 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARVGWGVHLGYCSGGSCSDYW in-frame + tgcagcctctggattcacctttagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtactagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagttgggtggggggttcacctaggatattgtagtggtggtagctgctctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
119 118 M01495:47:000000000-JFBTW:1:2115:13463:11691_1:N: productive (see comment) Homsap IGHV1-18*01 F 973 94.04 205/218 nt 93.58 204/218 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD2-15*01 F 2 8 8 18 8.8.18 [2.17.37.11] CARDSRACSGGSCSPNFNYW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 97 of V-REGION: 1 nucleotides (from position 198 in the user submitted sequence), (cause frameshift) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgagacacggccgtgtattactgtgcgagagattcgagggcttgtagtggtggtagctgctcccccaactttaactactgggccaggggaaccctggtccccgtctcctcggggagtccatccgccccaaccctttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
120 119 M01495:47:000000000-JFBTW:1:2115:27099:11806_1:N: productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F or Homsap IGHV5-51*06 (F) 840 100.00 168/168 nt 99.40 167/168 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-19*01 F 1 8 1 21 8.1.21 [3.17.27.11] CARHWGEDSSGWKNYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 57 of V-REGION: 54 nucleotides (from position 88 in the user submitted sequence), (do not cause frameshift) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatcatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattggggtgaggatagcagtggctggaagaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 326 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
121 120 M01495:47:000000000-JFBTW:1:2115:3685:11921_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-16*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKGLGVWGSYFDSW in-frame + tgcagcctctggaatcacctttagtaactatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtcgcagctattagtggtagtggtgataggacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaagggcctgggagtttgggggagttattttgacagctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
122 121 M01495:47:000000000-JFBTW:1:2115:5082:12033_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD1-7*01 F 1 8 8 18 8.8.18 [3.17.38.11] CARDQRLTGTTLGTYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcagcggttaactggaactactctcgggacctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
123 122 M01495:47:000000000-JFBTW:1:2115:23506:12333_1:N: productive Homsap IGHV1-3*04 (F) 1014 95.89 210/219 nt Homsap IGHJ5*02 F 183 84.31 43/51 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARGNYSDSGSYRPLDPW in-frame + gcttctggatacaccttcactagttatgctattcattgggtgcgccaggcccccggacagaggcttgagtggatgggatggatcaacactggcaacggtaatacaaaatattcacagaatttccaggccagagtcaccattaccagggacacatccgcgagcacagccttcatggaactgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagggaattactctgattcggggagttatcgccccctcgacccctggggccagggaaccctggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctctgtgagaattcccctcgcgatat 0 0 361 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
124 123 M01495:47:000000000-JFBTW:1:2115:25246:12633_1:N: productive Homsap IGHV3-30*05 F, or Homsap IGHV3-30*06 F or Homsap IGHV3-30*10 F or Homsap IGHV3-30*13 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-24*01 ORF 2 8 8 16 8.8.16 [3.17.38.11] CARAHDRGTRWLQSFDYW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatgaaagtaataaatactacacagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgttttactgtgcgagagcccatgatcgggggacgagatggctacaatcgtttgactactggggccagggaaccctggtcaccgtctcctccgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
125 124 M01495:47:000000000-JFBTW:1:2115:28228:12673_1:N: productive Homsap IGHV4-38-2*01 F (see comment) 1028 96.36 212/220 nt Homsap IGHJ5*02 F 192 86.27 44/51 nt Homsap IGHD6-13*01 F 2 8 7 11 8.7.11 [3.17.38.11] CARGISIASFDPW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR1-IMGT amino acid lengths (8 AA in M01495:47:000000000-JFBTW:1:2115:28228:12673_1:N:; 9 AA in Homsap IGHV4-38-2*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcaatagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagggataagtatagcatcattcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
126 125 M01495:47:000000000-JFBTW:1:2115:11494:12942_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARQGGGGSCYDDILCWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaaggcggtggtggtagctgctacgacgacattttatgttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
127 126 M01495:47:000000000-JFBTW:1:2115:8934:14121_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*01 F 3 8 7 17 8.7.17 [3.17.38.11] CARGAGTVPAARLDAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgctggaacggtaccagctgctaggcttgatgcttttgatatctggggccaagagacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
128 127 M01495:47:000000000-JFBTW:1:2115:24417:14194_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1014 95.89 210/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARDSTPELNYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccttgaccacagacacatccacgagcacagcctacatggaactgaggagcctgagatctgaagacacggccgtgtattactgtgcgagagattcaacccctgagcttaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
129 128 M01495:47:000000000-JFBTW:1:2115:8624:14322_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-2*01 F 2 8 7 25 8.7.25 [3.17.38.11] CARGRGDFRYCSSTSCSKFGLNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccggggcgatttccgatattgtagtagtaccagctgcagtaaattcggcttaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 390 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
130 129 M01495:47:000000000-JFBTW:1:2115:21441:14705_1:N: productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1014 95.89 210/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-3*01 F 3 8 8 12 8.8.12 [2.17.38.11] CAREMAHIFYFDYW in-frame + gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccatatattactgtgcgagagagatggcccatatattctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
131 130 M01495:47:000000000-JFBTW:1:2115:3620:14751_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-11*01 ORF 2 8 7 12 8.7.12 [3.17.38.11] CARRVGSDYQIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacgcgtcggatctgactaccaaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
132 131 M01495:47:000000000-JFBTW:1:2115:28990:15007_1:N: productive Homsap IGHV3-64D*06 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-10*01 F 1 8 8 14 8.8.14 [3.17.38.11] CVKDPFGELFNWFDPW in-frame + ttcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaagggactggaatatgtttcagctattagtagtaatgggggtagcacatactacgcagactccgtgaagggcagattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgagcagtctgagagctgaggacacggctgtgtattactgtgtgaaagatccgttcggggagttgttcaactggttcgacccctggggccagggaaccctgatcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
133 132 M01495:47:000000000-JFBTW:1:2115:13013:15711_1:N: productive Homsap IGHV1-8*03 F 1086 99.54 218/219 nt Homsap IGHJ1*01 F 233 94.23 49/52 nt Homsap IGHD2-8*01 F 3 8 8 14 8.8.14 [2.17.38.11] CLIMVYAIAREYFQHW in-frame + gcttctggatacaccttcaccagctatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccattaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgcctaattatggtgtatgctatagccagggaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
134 133 M01495:47:000000000-JFBTW:1:2115:28682:15711_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD1-26*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARGFHGWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagggtttcatgggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
135 134 M01495:47:000000000-JFBTW:1:2115:19889:15810_1:N: No rearrangement found Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1023 96.35 211/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccgacgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 282 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
136 135 M01495:47:000000000-JFBTW:1:2115:17287:16302_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-21*01 F 2 8 8 18 8.8.18 [3.17.38.11] CAREGDAYCGGDYPDAFDIW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagagggggacgcatattgtggtggtgattaccctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
137 136 M01495:47:000000000-JFBTW:1:2115:26847:16348_1:N: productive Homsap IGHV3-7*03 F 1097 99.10 221/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARALCSSTSCYGDSGYWFVPW in-frame + tgcagcctctggattcacctttagtaactattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagctttgtgtagtagtaccagctgctatggggattcggggtactggttcgtcccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
138 137 M01495:47:000000000-JFBTW:1:2115:12237:16404_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD3-16*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARMETVGGEIWYFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaatggaaacggttggcggtgagatctggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
139 138 M01495:47:000000000-JFBTW:1:2115:18892:16779_1:N: productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 876 99.44 176/177 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 2 X 8 14 X.8.14 [X.13.38.11] CRVSGKYYYGSGRDYW in-frame + cgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacagccgtgtattactgtagggtttcgggaaagtattactatggttcggggagagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 283 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
140 139 M01495:47:000000000-JFBTW:1:2115:17428:17393_1:N: productive Homsap IGHV1-69*10 F 1005 95.43 209/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD1-26*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARDQAQWPGATGANWFDPW in-frame + gcttctggttacaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatccttggtatagcaaactacgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagccttcatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgagagatcaagcgcaatggccgggagctacgggggccaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
141 140 M01495:47:000000000-JFBTW:1:2115:16999:17415_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ6*02 F 248 94.55 52/55 nt 8 8 10 8.8.10 [3.17.38.11] CAKEDYYGMDVW in-frame + tgcagcctctggattcacctttagcagttatgccatgggctgggtccgccaggctccagggaaggggctggagtgggtctcagttattagcggtagtggtggtagcacacactacgcagactccgtgaagggccggttcaccatctccagagacaatcccaagaacacgctgaatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagaggactattacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgggaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
142 141 M01495:47:000000000-JFBTW:1:2115:21753:19073_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARHENYYGSGYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacgagaattactatggttcggggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
143 142 M01495:47:000000000-JFBTW:1:2115:11260:19112_1:N: productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARTPSGWYHIDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaacccccagtggctggtaccatattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
144 143 M01495:47:000000000-JFBTW:1:2115:7404:19495_1:N:0 productive Homsap IGHV1-2*02 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARVGTIYVHGGDYW in-frame + gcttctggatacaccttcaccagttatgacatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtcgggaccatttacgtccacggcggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
145 144 M01495:47:000000000-JFBTW:1:2115:27175:19699_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARGRGYSYGPFDYW in-frame + gcatctggatacaccttcagcaactactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccccagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggcgtggatacagctatggtccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
146 145 M01495:47:000000000-JFBTW:1:2115:6290:19810_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARHGGYCSSTSCYANWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgggggatattgtagtagtaccagctgctacgcaaactggttcgacccctggggccaaggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
147 146 M01495:47:000000000-JFBTW:1:2115:20649:19982_1:N: No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttatcacctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccaggtacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagaggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaacctgactcgtagtggtgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 307 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
148 147 M01495:47:000000000-JFBTW:1:2115:17847:20900_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-22*01 F 2 8 8 24 8.8.24 [3.17.38.11] CAARRPPRDYYDSSGYYEDYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcggcacgacggccccccagagattactatgatagtagtggttattacgaagactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
149 148 M01495:47:000000000-JFBTW:1:2115:8695:21384_1:N:0 productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARDPSAYYYDSSGYYHDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatccttcggcgtattactatgatagtagtggttattaccatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
150 149 M01495:47:000000000-JFBTW:1:2115:22496:21617_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-2*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARELIVVVPAAIGFDPW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagaacttattgtagtagtaccagctgctattgggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
151 150 M01495:47:000000000-JFBTW:1:2115:12437:22313_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARDPTDYGSGSLDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagacccgacagactatggttcggggagtcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
152 151 M01495:47:000000000-JFBTW:1:2115:17691:22604_1:N: productive Homsap IGHV3-7*01 F 1025 95.52 213/223 nt Homsap IGHJ4*02 F (see comment) 168 83.33 40/48 nt Homsap IGHD2-15*01 F 2 8 8 9 8.8.9 [3.17.38.11] CARDGGRADSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggccggagtgggtggccaacataaagcaagatggaggtgagatgtactatgtggactctgtggagggccggttcaccgtctccagagacaacgccaggaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgcgcgagagatggtgggagggctgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
153 152 M01495:47:000000000-JFBTW:1:2115:9269:22895_1:N:0 productive (see comment) Homsap IGHV1-18*01 F 605 96.15 125/130 nt 95.38 124/130 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-17*01 F 2 7 X 15 7.X.15 [2.X.34.11] CARAVYGDNGEYYFDYW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 38 of V-REGION: 89 nucleotides (from position 29 in the user submitted sequence), (cause frameshift) gcttctggttacacctttaccacctatgaggctccaggccagactcaccatggccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagctgtctacggtgacaacggggagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 270 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
154 153 M01495:47:000000000-JFBTW:1:2115:7354:24111_1:N:0 unproductive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD1-26*01 F 3 8 7 18 8.7.18 [3.17.38.11] CARGGAPASGSYWV*KFDIW in-frame + rearranged sequence, stop codons cactgtctctggtggctccatcagtagttactactggagctggatccgacagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggggcgccccggctagtgggagctactgggtctagaagtttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
155 154 M01495:47:000000000-JFBTW:1:2113:14540:1505_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARGIVAVGLPRFFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcatcgtagcagtggggttaccgaggttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
156 155 M01495:47:000000000-JFBTW:1:2113:21110:1642_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARGFTGGMEYMVRGVNYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcttcactgggggaatggagtatatggttcggggagttaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
157 156 M01495:47:000000000-JFBTW:1:2113:15640:3594_1:N:0 productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD1-7*01 F 1 10 7 16 10.7.16 [3.17.38.11] CARLGTQFYYYYYGMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggcttgggactcagttttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
158 157 M01495:47:000000000-JFBTW:1:2113:18892:3621_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDFPPGSGNYYGMDVW in-frame + gcttctggaggcacctccagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggattatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatttccccccgggttcggggaactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
159 158 M01495:47:000000000-JFBTW:1:2113:10810:4092_1:N:0 No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F (see comment) 449 66.82 149/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found low V-REGION identity (66.82%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttattagtgctagtggtggtagcacatactacgcagactccgtatattactgtgcgaagaaccagctgctattactccagggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 273 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
160 159 M01495:47:000000000-JFBTW:1:2113:18223:4348_1:N:0 unproductive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD1-7*01 F 2 8 8 X 8.8.X [3.17.38.11] CARHVQEPVLPEAELCDRCGHGRVLLCERATGTTYWS#YYYYMDVW out-of-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggcaactggaactacttattggagtctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 447 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
161 160 M01495:47:000000000-JFBTW:1:2113:19176:4889_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARVGATMGSAFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagtgggagctaccatggggtctgcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
162 161 M01495:47:000000000-JFBTW:1:2113:13914:4964_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARGRGAPLSAFDIW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccggggagctccactgtcagcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
163 162 M01495:47:000000000-JFBTW:1:2113:24572:5531_1:N:0 unproductive (see comment) Homsap IGHV2-5*02 F 1002 89.16 222/249 nt Homsap IGHJ3*02 F (see comment) 23 70.00 7/10 nt 10 7 X 10.7.X [11.17.38.X] + rearranged sequence, stop codons, no junction found the JUNCTION has not been identified: the results for J-GENE may be unreliable acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 258 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
164 163 M01495:47:000000000-JFBTW:1:2113:11069:6210_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F (see comment) 147 76.47 39/51 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARHSSYYYDLTRW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacactcgtcgtattactatgatctaacgcggtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
165 164 M01495:47:000000000-JFBTW:1:2113:9891:6346_1:N:0: productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARAAIVVVVAATDFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagggccgctattgtagtggtggtagctgctactgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
166 165 M01495:47:000000000-JFBTW:1:2113:11703:6414_1:N:0 productive Homsap IGHV4-59*08 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-21*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARARPVIAPNYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagcccgtccagtgattgctccaaattactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
167 166 M01495:47:000000000-JFBTW:1:2113:18659:6871_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 996 99.50 200/201 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-16*01 F 2 4 8 14 4.8.14 [X.17.38.11] CARAPWSNAGYYFDYW in-frame + accagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagagccccatggagtaacgccgggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 307 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
168 167 M01495:47:000000000-JFBTW:1:2113:14848:7128_1:N:0 No rearrangement found Homsap IGHV3-33*08 F 1115 100.00 223/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaaaccactacattgtagtaggaccagccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 306 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
169 168 M01495:47:000000000-JFBTW:1:2113:27620:7323_1:N:0 productive Homsap IGHV1-18*01 F 915 90.87 199/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD4-17*01 F 3 8 8 14 8.8.14 [2.17.38.11] CATGRLTTVTTGLLYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcacttacaatggtaacacaaactatgcacagaagtttcagggcagggtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccatgtattactgtgcaacagggaggttgactacggtgactacggggctgttgtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
170 169 M01495:47:000000000-JFBTW:1:2113:18788:7487_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD2-15*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARGARTFRSLLRDDWYFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgcaaggacattcaggagtcttctacgagacgactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
171 170 M01495:47:000000000-JFBTW:1:2113:20403:8713_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-10*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARLGEGLDNWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagattgggggagggcttagacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
172 171 M01495:47:000000000-JFBTW:1:2113:7305:9108_1:N:0: productive Homsap IGHV4-38-2*01 F 926 90.58 202/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-23*01 ORF 2 9 7 12 9.7.12 [3.17.38.11] CAREKGDHGSINYW in-frame + cggtgtctctggttactccatcagcactggtcacgactggggctggatccggcagcccccagggaaggggctggagtggattgcaagtatgcatcacactggagccagttactacaacccgtccttcaagagtcgagtcaccatatcaataaacacgtccaagaatcagttttccctgaagctgacctctgtgaccgccgcagacacggccgtgtattactgtgcgagagagaaaggggatcacggaagtattaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
173 172 M01495:47:000000000-JFBTW:1:2113:3477:9349_1:N:0: productive Homsap IGHV3-30-3*01 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-6*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARVRGPGAARPDYW in-frame + tgcagcctctggattcaccttcagtttctatgctatgcactgggtccgccaggctgcaggcaagggactggagcgggtggcagttatatcatatgatggaagcaataaatactacgcagactccgtgaagggccgactcaccatttccagagacaattccaagaacacggtggatctgcaaatgaacagcctgagagctgaggacacggatatgtattattgtgcgagagttaggggccctggagcagctcgtccagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
174 173 M01495:47:000000000-JFBTW:1:2113:27444:9388_1:N:0 productive (see comment) Homsap IGHV4-39*07 F 1028 96.36 212/220 nt 95.91 211/220 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-3*02 F 3 8 7 12 8.7.12 [3.17.38.11] CARGLPGNNWFDPW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 31 of V-REGION: 6 nucleotides (from position 23 in the user submitted sequence), (do not cause frameshift) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtggacacgtccaagaaccagttctccctgcagttgaggtctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccttcctgggaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
175 174 M01495:47:000000000-JFBTW:1:2113:14889:9388_1:N:0 productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1145 100.00 229/229 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD3-9*01 F 2 8 10 23 8.10.23 [3.17.38.11] CTTDREDPYYDILTGFYYYYYMDVW in-frame + tgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtaccacagatcgagaagatccttattacgatattttgactggtttctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 393 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
176 175 M01495:47:000000000-JFBTW:1:2113:19513:9527_1:N:0 productive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1101 99.55 221/222 nt 99.10 220/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [3.16.38.11] CAKDRNGDYFFDYW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 1 nucleotides (from position 43 in the user submitted sequence), (cause frameshift) tgcagcctctggattcacctttagcagctatgccatgagctggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactctgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcggaacggtgactactttttcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
177 176 M01495:47:000000000-JFBTW:1:2113:4092:10006_1:N:0 productive Homsap IGHV2-5*02 F 1245 100.00 249/249 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD3-3*01 F 2 10 7 25 10.7.25 [11.17.38.11] CAHGLYDFWSGYYQDKKYYYYYYMDVW in-frame + acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacgggctctacgatttttggagtggttattaccaagacaagaaatactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaaccctttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 420 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
178 177 M01495:47:000000000-JFBTW:1:2113:27058:11069_1:N: productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD3-10*01 F 3 8 7 19 8.7.19 [3.17.38.11] CAGAPEGAMVRGVISNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgggagctccggagggggctatggttcggggagttattagtaattggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
179 178 M01495:47:000000000-JFBTW:1:2113:24686:11407_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 810 100.00 162/162 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-12*01 F 1 X 8 11 X.8.11 [X.8.38.11] CATDIVAKDSDYW in-frame + caagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacagatatagtggctaaggattctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 259 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
180 179 M01495:47:000000000-JFBTW:1:2113:5626:12167_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD3-10*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARGYYGSGSRRFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggtactatggttcggggagtaggaggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
181 180 M01495:47:000000000-JFBTW:1:2113:10343:12595_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [2.17.38.11] CAKPSSHFEAFDIW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaaacctagcagtcacttcgaagcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
182 181 M01495:47:000000000-JFBTW:1:2113:6898:12908_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1073 98.64 217/220 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-9*01 F 2 8 7 20 8.7.20 [3.17.38.11] CARGKGHPEGYDILTGYGFDIW in-frame + cactgtctctggtgactccatcagtaattactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatcttttacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcaagggccaccccgagggttacgatattttgactggttatggttttgatatctggggccaagggacgaaggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
183 182 M01495:47:000000000-JFBTW:1:2113:5621:14296_1:N:0 productive Homsap IGHV1-18*01 F 1059 98.17 215/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-15*01 F 1 8 8 8 8.8.8 [2.17.38.11] CATGGQGDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtgggtgggatggatcagcccttacaatggtgacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtttattactgtgcgacgggggggcagggcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
184 183 M01495:47:000000000-JFBTW:1:2113:28877:15522_1:N: unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*11 F or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 897 89.95 197/219 nt Homsap IGHJ6*02 F 193 79.03 49/62 nt Homsap IGHD2-15*01 F 2 8 8 23 8.8.23 [2.17.38.11] CARGGYCSWGSCY*ETACYYGMDD* in-frame + rearranged sequence, stop codons; TRP 118 not identified gcttctggaggcactttcagcagctatgctttcagctgggtgcgtcaggcgctaggacaagggcaggagtggatgggtggtttcatccccatccttggtacagcacactacgcacagaagttccagggcagagtcatgactaccgcggacgaatccacgagcacagcctacatcgaactgggcagcctgagatctgaggacacagcagggtattactgtgcgagaggaggatattgtagttggggtagctgttactgagaaacggcctgctactacggtatggacgactgaggccaagggaccaaggtagccgtatcctcagggagtgcatccgccccaaaccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
185 184 M01495:47:000000000-JFBTW:1:2113:19070:16508_1:N: productive Homsap IGHV3-7*03 F 1133 96.68 233/241 nt Homsap IGHJ6*03 F 218 86.21 50/58 nt Homsap IGHD3-22*01 F 2 8 8 11 8.8.11 [9.17.38.11] CARDYYDIPMDVW in-frame + gtccctgagactctcctgtgcagcctctggatttaccttcagtagttttgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagattattacgatatccccatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
186 185 M01495:47:000000000-JFBTW:1:2113:19914:16706_1:N: productive Homsap IGHV3-33*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD7-27*01 F 3 8 8 8 8.8.8 [3.17.38.11] CVKGDWGDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaacacactgtatctgcaaatgaacagcctgagagtcgaggacacggccgtatattactgtgtgaaaggggactggggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
187 186 M01495:47:000000000-JFBTW:1:2113:20860:16946_1:N: unproductive (see comment) Homsap IGHV5-51*01 F 965 87.85 217/247 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 1 8 8 8 8.8.8 [11.17.38.11] CARGSLWDYW in-frame + rearranged sequence, stop codons cggggagtctcttaacattaacaaaaaggcttctggctacatctctaccagctactctatcgactgagtgcgccagatgtccgggaaaggcctggagtggatgtgcgtcatctatcctggtgactctgaaaccagatacagtccgtccttccaaggccaggtcaccatcacagcagacgagtccaacagcatcgactacctgcagtggaacagcctgaaggcctcggacaccgccatatattactgtgcgagagggtcactctgggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
188 187 M01495:47:000000000-JFBTW:1:2113:23878:17075_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARAMAYYYDSSGYYGYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcgatggcctattactatgatagtagtggttattacggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
189 188 M01495:47:000000000-JFBTW:1:2113:27414:18350_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1064 98.18 216/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 3 8 7 11 8.7.11 [3.17.38.11] CARGGSLDSSHYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctactccagtgggagcaccaactacagcccctccctcaggagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggggggggtcgctagattcttctcactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
190 189 M01495:47:000000000-JFBTW:1:2113:19509:19128_1:N: unproductive (see comment) Homsap IGHV3-7*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARGVLEYYFDYW in-frame + rearranged sequence, stop codons tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtaggtagccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgaatcaccatctccagagacaacgccaagaactcactgtatctggaaatgaacagcctgagagccgaggacacggctatgtattactgtgctcgcggggtcctggagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
191 190 M01495:47:000000000-JFBTW:1:2113:5293:19194_1:N:0 productive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F or Homsap IGHV4-59*13 F 921 99.46 185/186 nt 98.92 184/186 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-16*01 F 1 7 7 14 7.7.14 [3.6.38.11] CARWGLRLGKYYFDYW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 38 of V-REGION: 34 nucleotides (from position 34 in the user submitted sequence), (cause frameshift) cactgtctctggtggctccatcagtagttactactggagtggattgggtatttctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggtgggggttacgtttgggaaagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 323 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
192 191 M01495:47:000000000-JFBTW:1:2113:23126:19497_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1056 97.30 216/222 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD4-11*01 ORF 2 8 8 14 8.8.14 [3.17.38.11] CARFYSNYYYYYMDVW in-frame + aaggcttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggagaattaatcctagtgactcttataccaactacaacccgtccttccaaggccacgtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagattctacagtaactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
193 192 M01495:47:000000000-JFBTW:1:2113:12420:19747_1:N: productive Homsap IGHV4-34*03 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD3-22*01 F 2 8 7 17 8.7.17 [3.17.38.11] CARYYYDSVYYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgaggtattactatgatagtgtgtactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
194 193 M01495:47:000000000-JFBTW:1:2113:12972:21342_1:N: productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-10*01 F 2 9 7 12 9.7.12 [3.17.38.11] CARPGSGRYDFDYW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgaggcctggttcggggaggtacgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
195 194 M01495:47:000000000-JFBTW:1:2113:23832:21382_1:N: productive Homsap IGHV4-34*03 F 1041 97.26 213/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-22*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARDHPYDSSGYAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatcacccctatgatagtagtggttatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
196 195 M01495:47:000000000-JFBTW:1:2113:8526:21590_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-21*01 F 2 8 8 14 8.8.14 [2.17.38.11] CAKGPSCCGGDWFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgtagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggcccctcctgttgtggtggtgactggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
197 196 M01495:47:000000000-JFBTW:1:2113:9012:22583_1:N:0 productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-26*01 F 1 8 8 16 8.8.16 [2.17.38.11] CAVVGATASRYYYGMDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcggtcgtgggagctacagctagtcggtactactacggtatggacatctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
198 197 M01495:47:000000000-JFBTW:1:2113:18785:22904_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARAGVRGAMPVDDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagcgggggttcggggagccatgcctgtggatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
199 198 M01495:47:000000000-JFBTW:1:2113:15070:23273_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD3-22*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARDGVITLNWYFDLW in-frame + tgcagcctctggattcacctttagcaactgtggcatgagctgggtccgccaggctccagggaagggactggagtgggtctctgctattagtggtagtggtgataggacaaactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggggttattactttaaactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
200 199 M01495:47:000000000-JFBTW:1:2113:12176:23436_1:N: No rearrangement found Homsap IGHV4-59*12 (F) 1086 99.54 218/219 nt 99.09 217/219 nt 7 7 X 7.7.X [3.17.38.X] + no rearrangement found in CDR1-IMGT, from codon 36 of V-REGION: 1 nucleotides (from position 27 in the user submitted sequence), (cause frameshift) cactgtctctggtggctccatcagtattactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 287 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
201 200 M01495:47:000000000-JFBTW:1:2113:17200:23762_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARGYYYDSSGDDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggggtattactatgatagtagtggtgatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
202 201 M01495:47:000000000-JFBTW:1:2113:18545:23821_1:N: productive Homsap IGHV4-61*08 F 1103 98.67 223/226 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-10*02 F 2 10 7 16 10.7.16 [3.17.38.11] CAREGGRGFTTPRAFDIW in-frame + cactgtctctggtggctccgtcagcagtggtggtaactactggagctggatccggcagccccccgggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgaatcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaggtggtaggggatttactaccccgcgggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
203 202 M01495:47:000000000-JFBTW:1:2113:23041:24156_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 156 78.43 40/51 nt Homsap IGHD6-19*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARDYSDRSSGWLTW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattacagcgatcgtagcagtggctggttaacctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
204 203 M01495:47:000000000-JFBTW:1:2113:20939:24262_1:N: productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1150 100.00 230/230 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 10 9 15 10.9.15 [2.17.38.11] CARSRSYSSGWYPLSYW in-frame + ccatctccggggacagtgtctctagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagatcccggtcttatagcagtggctggtacccgttgtcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
205 204 M01495:47:000000000-JFBTW:1:2113:20462:24361_1:N: productive Homsap IGHV1-18*01 F 978 94.06 206/219 nt Homsap IGHJ6*04 F 270 92.06 58/63 nt Homsap IGHD7-27*01 F 1 8 8 20 8.8.20 [2.17.38.11] CARTSLLVQLTGDYYYYGMDVW in-frame + gcgtctggaggcaccttcagcagctatgctataagcagggtgcgacaggcccctggacaagggcttgaggggatgggagggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaacttccctactcgttcagctaactggggattactactactacggtatggacgtctggggcaaagggcccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
206 205 M01495:47:000000000-JFBTW:1:2113:23324:24389_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-14*01 ORF 2 8 8 9 8.8.9 [3.17.38.11] CAKAEGAFDIW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtgatagtggtggtagcacatactatgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagcggaaggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
207 206 M01495:47:000000000-JFBTW:1:2113:18327:24451_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*02 F 2 8 8 24 8.8.24 [2.17.38.11] CASPTGCSSTSCYRGGNYYSYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtcccaccggttgtagtagtaccagctgctataggggggggaactactactcctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccatcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
208 207 M01495:47:000000000-JFBTW:1:2112:11865:2197_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F (see comment) 1086 99.54 218/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-11*01 ORF 2 8 8 14 8.8.14 [2.17.38.11] RARISYSNYVGGVDYW in-frame + 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattaccgtgcgagaatctcctacagtaactacgtcggtggcgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
209 208 M01495:47:000000000-JFBTW:1:2112:17966:2667_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1011 95.05 211/222 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD6-13*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARHRAAGGYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatccatcctgatgactctactaccaaatacagcccgtccttccaaggccaggtcaccatctcagtcgacaagtccatcagcatcgcctacctacagtggagcagcctgaaggcggcggacaccgccatatattactgtgcgagacatcgggcagctggtggttactactactacggtatggacgtctggggccaagggaccatagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
210 209 M01495:47:000000000-JFBTW:1:2112:9513:2970_1:N:0: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-10*01 F 1 8 7 17 8.7.17 [3.17.38.11] CARLGLLWFGESVNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaggttgggattactatggttcggggagtccgtcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcctcctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
211 210 M01495:47:000000000-JFBTW:1:2112:18764:3409_1:N:0 productive Homsap IGHV1-8*03 F 996 94.98 208/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD1-26*01 F 2 8 8 25 8.8.25 [2.17.38.11] CARGKVCCGWELLSSARMNYYYGMDVW in-frame + gcttctggttacacctttaccagctatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggaaagtatgttgcgggtgggagctactttccagcgcccgcatgaactactactacggtatggacgtctggggccaagggaccacggtcatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
212 211 M01495:47:000000000-JFBTW:1:2112:25063:4017_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 3 8 8 17 8.8.17 [3.17.38.11] CASGQVRGALYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtgggcaggttcggggagccctctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
213 212 M01495:47:000000000-JFBTW:1:2112:22913:4127_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1014 95.89 210/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARDYQLLSSNYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactatgcacagaagctccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattaccagctgctatccagcaactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
214 213 M01495:47:000000000-JFBTW:1:2112:23013:4339_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-2*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARSGWDIVVVPAAGKYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatcgggctgggatattgtagtagtaccagctgctggaaaatacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
215 214 M01495:47:000000000-JFBTW:1:2112:10875:4418_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 947 92.27 203/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARSRPGTYGDFDYW in-frame + cactgtctctggtggctccatcagtaatttctactggagctggatccggcagcccccagggaagggactggagtggattggctacatcaattacagtgggagcacgaagcacagcccctccctcaagagtcgagtcaccatgtcacttgacacgtctcagaaccagttctccctgaagctgagctctgtgaccgctgctgacacggccgtgtatttttgtgcgagatctagaccggggacatatggagactttgattactggggccagggaatcctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
216 215 M01495:47:000000000-JFBTW:1:2112:7309:4701_1:N:0: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARGPGYSYAYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcccggggtacagctatgcatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
217 216 M01495:47:000000000-JFBTW:1:2112:17458:6255_1:N:0 productive Homsap IGHV3-7*03 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-16*02 F 1 8 8 15 8.8.15 [3.17.38.11] CARDPVGDESNIVGDYW in-frame + tgcagactctggattcatctttagtagttattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatcccgtgggagatgaatcgaatattgtgggagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
218 217 M01495:47:000000000-JFBTW:1:2112:24019:6303_1:N:0 productive Homsap IGHV1-2*02 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARDRLYYYGSGSYPLFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagataggctgtattactatggttcggggagttaccctctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
219 218 M01495:47:000000000-JFBTW:1:2112:16173:6865_1:N:0 productive Homsap IGHV1-8*01 F 1059 98.17 215/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 1 8 8 9 8.8.9 [2.17.38.11] CARGSRLVDYW in-frame + gcttctggatacaccttcagcagttatgatatcaactgggtgcgacaggccactggacaaaggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaaattccagggcagagtcaccatgaccaggaacacctccataaacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtagcaggctagttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
220 219 M01495:47:000000000-JFBTW:1:2112:13590:7083_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1010 95.45 210/220 nt Homsap IGHJ6*02 F (see comment) 148 70.97 44/62 nt Homsap IGHD3-22*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARGYYDSSGPYGW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactattggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggaacaccaactacaacccctccctcaagagtcgagtcaccatatcaatagacacgtcgaagagtcagttttccctgaggctgaactctgtgaccgctgcggacacggccgtgtattattgtgcgagaggttactatgacagtagtggtccgtacgggtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
221 220 M01495:47:000000000-JFBTW:1:2112:5651:7314_1:N:0: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1037 96.82 213/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-23*01 ORF 2 8 7 13 8.7.13 [3.17.38.11] CARSYGGNAREVEYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggaatacattgggtatgtctattacagtgggagcaccaactacaacccctccctcaagagtcgagttaccatatcagtagacgcgtccaagaaccagttctccctgaagctgggctctgtgaccgctgcggacacggccgtgtattactgtgctcggagctacggtggtaacgcccgagaggttgaatactggggccagggaaccctggtcaccgtctccccagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
222 221 M01495:47:000000000-JFBTW:1:2112:19202:7330_1:N:0 productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARGSSMTHLSDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggatcatctatgacccacctctctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
223 222 M01495:47:000000000-JFBTW:1:2112:16607:7554_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-16*02 F 1 8 8 15 8.8.15 [3.17.38.11] CARLFGLGELSSVFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcgccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagattatttggtttgggggagttatcgtccgtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
224 223 M01495:47:000000000-JFBTW:1:2112:22634:7641_1:N:0 productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD5-18*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDEQLWLGYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatgagcagctatggttaggctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
225 224 M01495:47:000000000-JFBTW:1:2112:24107:7969_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-2*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARENKDIVVVPAAAPDGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaaaacaaggatattgtagtagtaccagctgccgcccctgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaaccctattccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
226 225 M01495:47:000000000-JFBTW:1:2112:16248:8032_1:N:0 productive Homsap IGHV3-11*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-23*01 ORF 3 8 8 13 8.8.13 [3.17.38.11] CAKDVSITTSVIDYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatgtgtcaataaccacgtcggtaattgactactggggccagggaaccctggttaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
227 226 M01495:47:000000000-JFBTW:1:2112:12473:8516_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 953 91.93 205/223 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD4-17*01 F 3 8 8 19 8.8.19 [3.17.38.11] CAKSGATVSTPYYFYYYMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcaactgtcagtggtgctggtggtagttcatactacgcagactccgtgaagggccggctcaccatctccagagacaattccaagaacacactgtatctgcaagtgaacagcctgagagccgaggacacggccgtgtactactgtgcgaaatctggggctacggtgagtaccccttactacttctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
228 227 M01495:47:000000000-JFBTW:1:2112:24168:8525_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-21*01 F 2 8 8 11 8.8.11 [3.17.38.11] CCGGDESDAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggcagattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgagcagtctgagagctgaggacacggctgtgtattactgttgtggtggtgatgagtctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
229 228 M01495:47:000000000-JFBTW:1:2112:20724:8622_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD3-3*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAHHASLVWGYDFWSFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgcatcatgcgagtctggtttggggatacgatttttggtcgttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
230 229 M01495:47:000000000-JFBTW:1:2112:12391:8729_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 247 88.71 55/62 nt Homsap IGHD6-6*01 F 1 8 8 19 8.8.19 [3.17.38.11] CARHPAGTEYSSSYYYYMDVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatccggccggtacggagtatagcagctcttactactactacatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
231 230 M01495:47:000000000-JFBTW:1:2112:20549:8935_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1073 98.64 217/220 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD1-7*01 F 3 8 7 15 8.7.15 [3.17.38.11] CAKHGVVWNSRSWFDPW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaacacggcgtagtctggaactcccggagctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
232 231 M01495:47:000000000-JFBTW:1:2112:25152:10192_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD5-18*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARHVPQYSYGGGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacgtcccacaatatagttatggaggaggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
233 232 M01495:47:000000000-JFBTW:1:2112:13905:10787_1:N: productive Homsap IGHV3-21*04 F 998 94.17 210/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARVSGRYYNYW in-frame + tgtagcctctgggttcaccgtcaatagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgaatctgcaaatgagcagcctgagagccgaggacacggccgtgtatttctgtgcgagagtgagcggcaggtactacaactattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
234 233 M01495:47:000000000-JFBTW:1:2112:4330:11017_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARLGAEGSGWYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttggcgcggaaggcagtggctggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
235 234 M01495:47:000000000-JFBTW:1:2112:21658:11315_1:N: productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*01 F 3 8 8 10 8.8.10 [3.17.38.11] CAAEGYTTFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactatgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcggctgaggggtatactacgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
236 235 M01495:47:000000000-JFBTW:1:2112:26222:11669_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*02 F 2 8 8 11 8.8.11 [3.17.38.11] CACTTPLDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgtgcactaccccgttggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
237 236 M01495:47:000000000-JFBTW:1:2112:9316:11735_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-8*01 F 3 8 7 18 8.7.18 [3.17.38.11] CARDVKWVYAYYYYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagacgtaaagtgggtgtatgcttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
238 237 M01495:47:000000000-JFBTW:1:2112:25337:13076_1:N: productive Homsap IGHV3-7*01 F 1015 89.92 223/248 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [11.17.38.11] CARSTTYYYDSSGYFDYW in-frame + attggtggtccctgagtctctcctgcgcagcctctggattcacctttagtagaaagtggatccgccgggtccgccaggctacagggaaggggttggcgtgggttgataacataaagcaagatggaagtgagtattactctgtggactctgtgatgggtcgattcaccatccccagagacaacgccaagaactcattgtatctgcaaatgaccagcctgagagccgaggacacggctgtgtattactgtgcgaggtctacgacttattactatgatagtagtggttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
239 238 M01495:47:000000000-JFBTW:1:2112:2723:13408_1:N:0 productive Homsap IGHV3-7*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 174 90.48 38/42 nt Homsap IGHD7-27*01 F 3 8 8 5 8.8.5 [3.17.38.11] CATGGYW in-frame + tgcagcctctggattcacctttagcaactatctgatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaagtgagaaaaactatgtggactctgcgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgacagggggctattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
240 239 M01495:47:000000000-JFBTW:1:2112:4843:13669_1:N:0 productive Homsap IGHV3-7*03 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARENYGDYGRYFDPW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcatgatggaagtgagaagttctatgtggactctgtgaagggccgattcaccatctccagagacaacgtcaagaactcactttatctacaaatgaacagcctgagagccgaggacacggccgtgttttactgtgcgagagagaactacggtgactacgggcgttacttcgacccctggggccggggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
241 240 M01495:47:000000000-JFBTW:1:2112:23305:14253_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARQGVRGVMDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagggggttcggggagttatggactactggggccagggaaccctggtcaccgtctccgcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
242 241 M01495:47:000000000-JFBTW:1:2112:13727:14273_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [2.17.38.11] CAREPFYYYDSSGYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagcccttttattactatgatagtagtggttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
243 242 M01495:47:000000000-JFBTW:1:2112:6120:14609_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 3 8 8 22 8.8.22 [2.17.38.11] CAREDIVVVPAAILSYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggatattgtagtagtaccagctgctatccttagctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
244 243 M01495:47:000000000-JFBTW:1:2112:11779:15242_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1037 96.82 213/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-24*01 ORF 3 8 7 13 8.7.13 [3.17.38.11] CASKRDGDNSNFDNW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccaggtaggggactggagtggattggatatatcttttacactgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcaatagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtctattactgtgcgagcaaaagagatggcgacaactccaactttgacaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgcgaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
245 244 M01495:47:000000000-JFBTW:1:2112:19517:15408_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-19*01 F 2 8 8 23 8.8.23 [2.17.38.11] CARDSAMWYGIAVAHNYYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagattctgcgatgtggtacggtatagcagtggctcacaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
246 245 M01495:47:000000000-JFBTW:1:2112:24279:15778_1:N: productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 9 7 24 9.7.24 [3.17.38.11] CAREAPNYGDYLHTNFGLSGFGADYW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagaggccccaaactacggtgactacctacatactaacttcgggttgagcggcttcggggctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 390 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
247 246 M01495:47:000000000-JFBTW:1:2112:7418:16205_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD2-2*01 F 2 8 7 22 8.7.22 [3.17.38.11] CARVDRIYCSSTSCPGYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaaatacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtagaccgcatctattgtagtagtaccagctgccccgggtactactactacatggacgtctggggcacagggaccaccgtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
248 247 M01495:47:000000000-JFBTW:1:2112:23794:16922_1:N: productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 910 100.00 182/182 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 X 8 10 X.8.10 [X.14.38.11] CASRDSSGGDYW in-frame + gggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagccgtgatagtagtggtggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 276 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
249 248 M01495:47:000000000-JFBTW:1:2112:8590:17134_1:N:0 unproductive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 3 8 8 X 8.8.X [3.17.38.11] CARQPWE#YYYYYGMDVW out-of-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagccatgggagctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
250 249 M01495:47:000000000-JFBTW:1:2112:5661:17181_1:N:0 unproductive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1055 97.73 215/220 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD1-14*01 ORF 3 8 7 14 8.7.14 [3.17.38.11] CAGVNGQDYYYYMDVW in-frame + rearranged sequence, stop codons cactgtctctggtcgctacatcagtagttcctactggagctggatccggcagcccccagggaagtgactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgcgaccgctgcggacacggccgtgtattactgtgcgggagttaacgggcaggactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcaggtcctcagggagtgcatccgccccaacccttttccccctcgtctctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
251 250 M01495:47:000000000-JFBTW:1:2112:17089:17471_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1023 96.35 211/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-22*01 F 2 8 8 23 8.8.23 [2.17.38.11] CARDQAPDYYDSSGYPYYYYGMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcaagccccagattactatgatagtagtggttacccctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
252 251 M01495:47:000000000-JFBTW:1:2112:27230:17526_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 268 94.92 56/59 nt 8 8 11 8.8.11 [3.17.38.11] CARRDYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
253 252 M01495:47:000000000-JFBTW:1:2112:24875:17954_1:N: productive Homsap IGHV1-18*04 F 933 91.78 201/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-14*01 ORF 3 8 8 14 8.8.14 [2.17.38.11] CARGRFQKGRYYFDYW in-frame + gcttctggatacaccttcaccggctactctatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccggttccagaaaggaagatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
254 253 M01495:47:000000000-JFBTW:1:2112:12360:18851_1:N: productive Homsap IGHV1-18*01 F 1014 95.89 210/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD3-9*01 F 3 8 8 13 8.8.13 [2.17.38.11] CVRDRLVGVRWFDPW in-frame + gcttctggatacaccttcactagctatgctatgaattgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatagtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacgcggccgtgtattactgtgtgagagacagactggtcggcgtgcggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
255 254 M01495:47:000000000-JFBTW:1:2112:17119:19674_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARASIAAAGSIDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcaagtatagcagcagctggttcgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
256 255 M01495:47:000000000-JFBTW:1:2112:24204:21574_1:N: productive Homsap IGHV1-2*02 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-23*01 ORF 2 8 8 16 8.8.16 [2.17.38.11] CARVSPYYGGNSDPLDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagagtcaccatgaccagggacacgtccacgagcacagtatacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtatccccctactacggtggtaactccgatcctcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
257 256 M01495:47:000000000-JFBTW:1:2112:23459:21749_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 881 88.34 197/223 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKGQIGTYVVFDIW in-frame + tgcagcctctggattcacctttagcagttataccatgagctgggtccgccaggctccagggaaggggctggaatgggtcgcaggttgtagttatgacggtgatgtcacatactacgcagactccgtgaggggccggttcagcatctccagagacaattccaggaacacagtgtttttgcaaatgaatagcctgagagccgaggacacggccatttatcactgtgcgaaaggccagattgggacctacgtcgtgtttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
258 257 M01495:47:000000000-JFBTW:1:2112:15449:23096_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD5-18*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARDVRPYYYGLMDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagacgtacgaccatattactatggtttaatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
259 258 M01495:47:000000000-JFBTW:1:2112:12454:23215_1:N: productive Homsap IGHV2-5*02 F 1209 98.39 245/249 nt Homsap IGHJ3*01 F (see comment) 142 76.00 38/50 nt Homsap IGHD2-2*01 F 3 10 7 14 10.7.14 [11.17.38.11] CAHGNFVIVPAAPEVW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactcgtgaagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagccggctcaccatcaccaaggacacctccaaacaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacggtaattttgtaatagtaccagctgctcccgaagtctggggcccgggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
260 259 M01495:47:000000000-JFBTW:1:2112:11184:24268_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-59*11 F or Homsap IGHV4-61*01 F or Homsap IGHV4-61*07 F or Homsap IGHV4-61*08 F 905 100.00 181/181 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD5-24*01 ORF 2 X 7 17 X.7.17 [X.15.38.11] CARGLGRWLHKSVDAFDIW in-frame + ctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcctcgggagatggctacacaaatccgttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 296 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
261 260 M01495:47:000000000-JFBTW:1:2112:14324:24575_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 978 94.06 206/219 nt Homsap IGHJ5*02 F (see comment) 163 82.98 39/47 nt Homsap IGHD2-2*02 F 2 8 8 7 8.8.7 [2.17.38.11] CARERYTHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagaggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccaggaacacgtccacgagcacagtctacatggagctgagaagcctgagatctgaggacacggccgtgtattactgtgcgagagaaaggtatacacactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
262 261 M01495:47:000000000-JFBTW:1:2110:19362:1940_1:N:0 productive Homsap IGHV3-11*01 F 1115 100.00 223/223 nt Homsap IGHJ6*04 F 189 83.33 45/54 nt Homsap IGHD3-10*02 F 2 8 8 9 8.8.9 [3.17.38.11] CARAVPEMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagctgtcccggagatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
263 262 M01495:47:000000000-JFBTW:1:2110:21774:1944_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 8 8 17 8.8.17 [3.17.38.11] CAKVGTTITTYYYHYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggggactacaataactacgtactactatcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
264 263 M01495:47:000000000-JFBTW:1:2110:18560:2055_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-3*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARDSFRWDYDFWSGYYYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggcagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatagtttcaggtgggattacgatttttggagtggttattattactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
265 264 M01495:47:000000000-JFBTW:1:2110:8482:3047_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-24*01 ORF 2 8 8 17 8.8.17 [3.17.38.11] CAKTGRLQFHGALYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaacggggcggctacaattccatggggcgctctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
266 265 M01495:47:000000000-JFBTW:1:2110:14270:3318_1:N:0 unproductive (see comment) Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-16*01 F 1 8 8 X 8.8.X [2.17.38.11] CASSCGRW##DIW out-of-frame + rearranged sequence, stop codons gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagttcgtgtgggagatgggattgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
267 266 M01495:47:000000000-JFBTW:1:2110:6891:3500_1:N:0: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 934 95.57 194/203 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-16*01 F 2 2 10 13 2.10.13 [X.17.38.11] CTRGRFWGNYAFDYW in-frame + gctattggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtactagagggcggttctggggtaactacgcatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 306 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
268 267 M01495:47:000000000-JFBTW:1:2110:22966:3658_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1091 99.55 219/220 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 156 78.43 40/51 nt Homsap IGHD6-25*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARDNDRYSSGYPSW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagataatgatcggtatagcagtggttatccctcttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgactcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
269 268 M01495:47:000000000-JFBTW:1:2110:22509:3869_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-10*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARPFVGLGLPAYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggccctttgtgggtttggggctcccggcgtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
270 269 M01495:47:000000000-JFBTW:1:2110:15420:4366_1:N:0 productive Homsap IGHV3-7*03 F 1034 95.96 214/223 nt Homsap IGHJ6*03 F (see comment) 229 85.48 53/62 nt Homsap IGHD6-13*01 F 1 8 8 13 8.8.13 [3.17.38.11] CAKASSAYYCYMDVW in-frame + other possibilities: Homsap IGHJ6*04 and Homsap IGHJ6*01 (highest number of consecutive identical nucleotides) tgtagcctctggattcacgttaagtacctactggatgagctgggtccgccaggctccagggatggggccggagtgggtggccaacataaagcaggatggaagtgacaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgaaagccagcagcgcttactactgctacatggacgtctggggcaaggggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
271 270 M01495:47:000000000-JFBTW:1:2110:18103:4546_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARPPMVRGLGGYW in-frame + aagggttctggatacagctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccccctatggttcggggattagggggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
272 271 M01495:47:000000000-JFBTW:1:2110:15490:4962_1:N:0 productive Homsap IGHV4-31*01 F 1112 99.12 224/226 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-8*02 F 2 10 7 12 10.7.12 [3.17.38.11] CARGGGGGYYFDCW in-frame + cactgtctctggtggctccatcagtagtggtggttactactggagttggatccgccagcacccagggaagggcctggagtggattgggtacatctattacagtgggagcacctactacaacccgtccctcaagagtctagttaccatatcagtagacacgtctaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcgagagggggggggggcggatactactttgactgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
273 272 M01495:47:000000000-JFBTW:1:2110:13232:5836_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 696 96.00 144/150 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD2-2*01 F 3 X 8 19 X.8.19 [X.4.38.11] CARDRVVPAARSLRHYGMDVW in-frame + atatcgcgagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgagtagtaccagctgctaggtccctccgtcactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 271 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
274 273 M01495:47:000000000-JFBTW:1:2110:22315:5853_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-26*01 F 2 8 8 11 8.8.11 [2.17.38.11] CATVNLWELPDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagtgaatttgtgggagctaccggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
275 274 M01495:47:000000000-JFBTW:1:2110:5966:6767_1:N:0: productive Homsap IGHV1-8*02 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-6*01 F 1 8 8 7 8.8.7 [2.17.38.11] CARAPPDYW in-frame + gcttctggttacacctttagcagctatggtatcagttgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgccccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcccccgcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
276 275 M01495:47:000000000-JFBTW:1:2110:3689:6969_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 971 92.83 207/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-24*01 ORF 3 8 8 13 8.8.13 [3.17.38.11] CVRKLGADGYNCDYW in-frame + tgcagcctctgggatcaccgtcagtagcagctacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatctattagtgggagtggtactactacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgtgcgaaagctcggggcagatggctacaattgcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
277 276 M01495:47:000000000-JFBTW:1:2110:21152:7112_1:N:0 productive Homsap IGHV3-7*01 F 890 88.79 198/223 nt Homsap IGHJ4*02 F 190 89.36 42/47 nt Homsap IGHD1-14*01 ORF 3 8 8 7 8.8.7 [3.17.38.11] CARDHLDLW in-frame + tgcagcctctggattcacatttggaacttattggatgagttgggtccgtcaggctccagggaaggggctggagtgggtggccgccacaagcccagatggaactgagaaaaaatatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaacgcgctgttttttcaaatgaacagcctgcgagccgacgacacggctatctattactgtgcgagagaccacttggacctctggggccagggaaccctggtcaccatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
278 277 M01495:47:000000000-JFBTW:1:2110:22789:7484_1:N:0 productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 996 94.98 208/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARESYYGSGSYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaaagttactatggttcggggagttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
279 278 M01495:47:000000000-JFBTW:1:2110:26808:7508_1:N:0 productive Homsap IGHV1-2*02 F 1014 95.89 210/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-24*01 ORF 2 8 8 16 8.8.16 [2.17.38.11] CARDTGRWLQLRDYFDYW in-frame + gcttctggaggcaccttcagcagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagataccggaagatggctacaattaagggactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
280 279 M01495:47:000000000-JFBTW:1:2110:3888:7869_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-3*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARGLPNITIFGVVSWYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaaattccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtcttccaaatattacgatttttggagtggttagctggtattactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtggaattcccctcgcgatat 0 0 373 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
281 280 M01495:47:000000000-JFBTW:1:2110:18266:7911_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 2 8 7 8 8.7.8 [3.17.38.11] CARAGGPDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagcgggggggcctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
282 281 M01495:47:000000000-JFBTW:1:2110:16904:8393_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 971 92.83 207/223 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD3-9*01 F 2 8 8 9 8.8.9 [3.17.38.11] CARDFTSFDIW in-frame + tgcagcctctggattcacctttggcagttataccatgtcctggttccgccaggctgcagggaaggggctggagtgggtctcagctattagtgctattactggtaacacattctccgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatttcacctcttttgatatctggggccaagggacaatggtcaccgtctcttcggggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
283 282 M01495:47:000000000-JFBTW:1:2110:6784:8865_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-9*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARFTYYDILTGPNPADYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatttacgtattacgatattttgactggcccgaacccggcagactacggtatggacgtctggggccaagggaccacggtcaccgcctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
284 283 M01495:47:000000000-JFBTW:1:2110:4604:9272_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD4-11*01 ORF 3 8 8 14 8.8.14 [3.17.38.11] CAKDRRKTTVTTEDYW in-frame + tgcagcctctggattcacctttagcaactatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaggaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcgaaggaagactacagtaactacagaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
285 284 M01495:47:000000000-JFBTW:1:2110:21274:9351_1:N:0 productive (see comment) Homsap IGHV3-11*06 F, or Homsap IGHV3-21*05 (F) 1037 96.82 213/220 nt 96.36 212/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARVVVAYQDYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 57 of V-REGION: 3 nucleotides (from position 89 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagtggtggtagcttaccaggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
286 285 M01495:47:000000000-JFBTW:1:2110:27639:10024_1:N: productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD4-17*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARSATVTTSWFDPW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagatccgctacggtgactacgtcctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
287 286 M01495:47:000000000-JFBTW:1:2110:26709:10286_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ1*01 F 242 96.15 50/52 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARRADYYDSSGYYPEYFQHW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgcgccgattactatgatagtagtggttattaccccgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
288 287 M01495:47:000000000-JFBTW:1:2110:9529:10673_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD6-19*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARLTDSSGWPLYGW in-frame + aggggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcactgatagcagtggctggccactgtatgggtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
289 288 M01495:47:000000000-JFBTW:1:2110:16365:10694_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD1-1*01 F 3 8 8 10 8.8.10 [3.17.38.11] CAKGWNNPFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggtggaacaacccgttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
290 289 M01495:47:000000000-JFBTW:1:2110:28900:10986_1:N: No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 288 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
291 290 M01495:47:000000000-JFBTW:1:2110:28759:10988_1:N: productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-21*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARDHRGGIDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatcatcggggtgggattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
292 291 M01495:47:000000000-JFBTW:1:2110:20556:10997_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 1 8 8 9 8.8.9 [2.17.38.11] CARDIQGFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatatacaggggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
293 292 M01495:47:000000000-JFBTW:1:2110:19794:11258_1:N: productive Homsap IGHV1-8*02 F 1041 97.26 213/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD6-13*01 F 1 8 8 14 8.8.14 [2.17.38.11] CATSSSWYPEVWFDPW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacaagcagcagctggtacccggaggtctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgcctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
294 293 M01495:47:000000000-JFBTW:1:2110:5866:11452_1:N:0 unproductive (see comment) Homsap IGHV4-61*01 F 1049 96.02 217/226 nt Homsap IGHJ5*02 F 147 76.47 39/51 nt Homsap IGHD6-19*01 F 1 10 7 11 10.7.11 [3.17.38.11] CARGARSSGWTA* in-frame + rearranged sequence, stop codons; TRP 118 not identified cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctccagttgaactctgtgactcccgaggacacggctgtgtattactgtgcaagaggcgcccgtagcagtggctggacagcctagggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
295 294 M01495:47:000000000-JFBTW:1:2110:28790:11687_1:N: productive Homsap IGHV3-7*03 F 1034 95.96 214/223 nt Homsap IGHJ6*03 F 241 89.83 53/59 nt Homsap IGHD6-6*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARARSYYYMDVW in-frame + tgcagcctctggattcacctttagaagctattggatgaactgggtccgccaggctccagggaaggagctggagtgggtggccaacataaaccaagatggaactgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagccaggtcctactactacatggacgtctggggcagagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
296 295 M01495:47:000000000-JFBTW:1:2110:15923:11951_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARGGWPYYYGNYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggtggatggccgtattactatggaaactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctggagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
297 296 M01495:47:000000000-JFBTW:1:2110:20110:12071_1:N: productive Homsap IGHV1-2*04 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD1-26*01 F 1 8 8 19 8.8.19 [2.17.38.11] CATLSDPEVIVGATDDAFDIW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgacgctctcggatccggaagtaatagtgggagctaccgatgatgcttttgatatctggtgccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacacttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
298 297 M01495:47:000000000-JFBTW:1:2110:26371:12428_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1014 95.89 210/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD7-27*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARELGIRGDAFDIW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaactggggataaggggcgatgcttttgatatttggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
299 298 M01495:47:000000000-JFBTW:1:2110:12870:12971_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-3*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARGGSLEVLLALEFW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtaatggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaattgaacagcctgagagcctacgacacggccgtatatttctgtgcgagaggaggatccctggaggtgctattggcccttgagttctggggccagggaaccctggtcaccgtctcctccgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
300 299 M01495:47:000000000-JFBTW:1:2110:23145:13882_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-24*01 ORF 1 8 8 15 8.8.15 [3.17.38.11] CAKDRVEMATIHYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcgggtagagatggctacaattcactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
301 300 M01495:47:000000000-JFBTW:1:2110:19410:14187_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 2 8 8 16 8.8.16 [3.17.38.11] CVRGGGYCGGGSCPGDYW in-frame + tgcagcgtctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggcaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagtctgagagtcgaggacacggctgtgtattactgtgtaagaggcgggggatactgtggtggtggtagctgccctggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
302 301 M01495:47:000000000-JFBTW:1:2110:15127:14250_1:N: productive Homsap IGHV4-39*01 F, or Homsap IGHV4-39*05 F or Homsap IGHV4-39*08 (F) 1130 100.00 226/226 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD3-3*02 F 2 10 7 22 10.7.22 [3.17.38.11] CARHGTEQDFWSGYSYYYYGMDVW in-frame + cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattgggagtatctattatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggctgtgtattactgtgcaagacatgggactgaacaggatttttggagtggttattcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
303 302 M01495:47:000000000-JFBTW:1:2110:21007:14260_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-15*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARHGCSGGSCYSGFDVW in-frame + other possibilities: Homsap IGHJ6*01 and Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcaacaccgcctacctgcagtggagcagcctgaaggcctcggacagcgccatgtattactgtgcgagacacggctgtagtggtggttcctgctactcaggttttgacgtctggggccagggaaccccggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
304 303 M01495:47:000000000-JFBTW:1:2110:13329:14991_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD5-18*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARVDTAMVLEIDPW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgagaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggtggatacagctatggttttggaaatcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
305 304 M01495:47:000000000-JFBTW:1:2110:17142:15546_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD1-1*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARRGTVGFYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgtggaacagtagggttctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
306 305 M01495:47:000000000-JFBTW:1:2110:16405:15565_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD3-10*01 F 2 8 7 7 8.7.7 [3.17.38.11] CANSGVDDW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtatattactgtgcgaattcaggggtagatgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
307 306 M01495:47:000000000-JFBTW:1:2110:8084:15961_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-23*01 ORF 3 8 8 16 8.8.16 [3.17.38.11] CASQSTVVTPGEDYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagccagtctacggtggtaactccgggggaggactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
308 307 M01495:47:000000000-JFBTW:1:2110:4528:16085_1:N:0 productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-10*01 F 2 8 8 24 8.8.24 [3.17.38.11] CARGGGSGSYYQPVGGIRYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagggggtggttcggggagttattatcagccggtagggggaattcgctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 390 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
309 308 M01495:47:000000000-JFBTW:1:2110:3956:16267_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARFTREYYYDSSGYYGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatttacgagagagtattactatgatagtagtggttattatggatggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
310 309 M01495:47:000000000-JFBTW:1:2110:26526:16475_1:N: productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD2-2*03 F 2 9 7 23 9.7.23 [3.17.38.11] CARVGGYCSSTSCRNNYYYYYMDVW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagttggtgggtattgtagtagtaccagctgccgcaataattactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
311 310 M01495:47:000000000-JFBTW:1:2110:5908:16593_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 960 93.15 204/219 nt Homsap IGHJ5*02 F (see comment) 147 76.47 39/51 nt Homsap IGHD1-26*01 F 1 8 8 8 8.8.8 [2.17.38.11] CATHVGAIHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcaacccacgtgggagctattcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
312 311 M01495:47:000000000-JFBTW:1:2110:10920:17465_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-12*01 F 3 8 7 18 8.7.18 [3.17.38.11] CARGGGRLVRYYYYYYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggggcggtcggctggtgcgctactactactactactattttgactactggggccaggaaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
313 312 M01495:47:000000000-JFBTW:1:2110:8516:18836_1:N:0 productive Homsap IGHV1-8*01 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARSGFGAGTAFAYW in-frame + acttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaaggacttgagtggatgggatggatgaaccctaacagtggagacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccacatacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattattgtgccagaagcgggttcggggctggtacggcttttgcctactggggcccgggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
314 313 M01495:47:000000000-JFBTW:1:2110:22362:19285_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 2 8 8 13 8.8.13 [3.17.38.11] CESWELRIRGVLDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgagagttgggagctacgaattagaggcgttcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
315 314 M01495:47:000000000-JFBTW:1:2110:12990:19848_1:N: unproductive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1037 96.82 213/220 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD3-22*01 F 2 8 7 X 8.7.X [3.17.38.11] CARGLLL***WFNLDA#FDIW out-of-frame + rearranged sequence, stop codons gactgtctctggtggctccatcagtagttactactggacctggatccggcagcccccagggaagggactggagtggattggggatatctataacactgggagcaccatctacaacccctccctcaagagtcgagtcaccatattagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcttattactatgatagtagtggtttaacttagatgctttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
316 315 M01495:47:000000000-JFBTW:1:2110:9351:22680_1:N:0 productive Homsap IGHV3-48*03 F 1007 94.62 211/223 nt Homsap IGHJ6*03 F 230 90.91 50/55 nt Homsap IGHD1-1*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARETNYYMDVW in-frame + tgcagcctctggattcaccttcgggagttacgaaatgagttgggtccgccaggctccggggaaggggctggagtgggtttcatacattaggagtgatggtggtaccacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagacaaactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
317 316 M01495:47:000000000-JFBTW:1:2110:8478:23588_1:N:0 productive Homsap IGHV1-2*02 F 951 92.69 203/219 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD6-6*01 F 1 8 8 10 8.8.10 [2.17.38.11] CVTYSSSSAWKW in-frame + gcctctggacacaccttcaccgaccactatatacactggatgcgacaggcccctggacaagggcttgagtggatgggatggatcagctctaatagtggtgacacaaattatgcacagaactttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggacctgagcaggctggtatctgacgacacggccgtatattactgtgtgacctatagcagctcgtctgcgtggaagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
318 317 M01495:47:000000000-JFBTW:1:2110:15598:24411_1:N: productive Homsap IGHV3-7*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [3.17.38.11] CAKDSGFRCTDTSCHVFDYW in-frame + tgcagcctctggattcacctttagtagttattggatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatagtgggtttaggtgtactgataccagctgccatgtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
319 318 M01495:47:000000000-JFBTW:1:2111:7693:2379_1:N:0: productive Homsap IGHV3-11*06 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-10*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARLWFGELSHLDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagattatggttcggggagttatcccaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
320 319 M01495:47:000000000-JFBTW:1:2111:9401:3117_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 8 22 8.8.22 [2.17.38.11] CARGPYYYDSSGYYSSYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtccgtattactatgatagtagtggttattactccagctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
321 320 M01495:47:000000000-JFBTW:1:2111:26129:4023_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD2-2*02 F 2 8 8 25 8.8.25 [2.17.38.11] CARDGGYCSSTSCYTTWYYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatggagggtattgtagtagtaccagctgctatacgacttggtactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
322 321 M01495:47:000000000-JFBTW:1:2111:13349:5492_1:N:0 No rearrangement found Homsap IGHV3-NL1*01 F (see comment) 414 76.39 110/144 nt 8 X X 8.X.X [25.15.X.X] - no rearrangement found low V-REGION identity (76.39%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gggggaaaagggttggggcggatgcactccctgaggagacggtgaccagggttccctggccccagtagtcacagtaataaccactactatcatagtaatacttcccccctttcgcacagtaatatacggccgtgtcctcggctctcaggctgttcatttgcagatacagcgtgttcttggaattgtctctgagactctcctgtgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtc 0 0 281 4 (complrev_indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
323 322 M01495:47:000000000-JFBTW:1:2111:24556:5668_1:N:0 productive Homsap IGHV3-11*01 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-24*01 ORF 3 8 8 13 8.8.13 [3.17.38.11] CANWGRRDAYNFDFW in-frame + tgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaactgggggcgtagagatgcctacaattttgacttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
324 323 M01495:47:000000000-JFBTW:1:2111:7462:5681_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 1 8 8 8 8.8.8 [3.17.38.11] CARGLLYGYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtggtagtggtggtaccacacactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagggggttattgtatggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
325 324 M01495:47:000000000-JFBTW:1:2111:6954:6436_1:N:0: productive Homsap IGHV3-48*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-10*01 F 1 8 8 19 8.8.19 [3.17.38.11] CAKDAAGRPKWFGEPIHFDYW in-frame + tgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaaagatgctgcaggacggcccaaatggttcggggagcccattcactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
326 325 M01495:47:000000000-JFBTW:1:2111:3942:7520_1:N:0: productive (see comment) Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 899 89.24 199/223 nt 88.79 198/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD2-8*01 F 1 8 8 7 8.8.7 [3.17.38.11] CAKLPMCDW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT at codon 36 of V-REGION: 'ACT' (3 nucleotides at position 26 to 28 in the user submitted sequence), (do not cause frameshift); tgcggcctctggattcagcttcagtACTaactactggatggactgggtccgccaagctcctgggaaggggctggtgtgggtcgcacgtattaacactgatgggagaggagcaaattacgcggacgccgtgaggggacgattcaccatctccaggtacagcgccaagaacactcgggctctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcgaaattgcctatgtgtgactggggccagggaaccctcgtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
327 326 M01495:47:000000000-JFBTW:1:2111:8855:8185_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [2.17.38.11] CAREYGDYVWLVDW in-frame + other possibilities: Homsap IGHJ6*01 and Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgacatctgaggacacggccgtctactactgtgcgagggagtacggcgactacgtttggctggtcgactggggccagggaaccccggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
328 327 M01495:47:000000000-JFBTW:1:2111:25920:9641_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1037 96.82 213/220 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARGGPPYYYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggggtcccccctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
329 328 M01495:47:000000000-JFBTW:1:2111:18057:9698_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*02 F or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 726 99.32 146/147 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 2 X 8 17 X.8.17 [X.3.38.11] CAREDYYGSESNPYYFDYW in-frame + atggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagaggattactatggttcggagagtaacccgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 262 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
330 329 M01495:47:000000000-JFBTW:1:2111:24211:9978_1:N:0 productive Homsap IGHV3-7*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 3 8 8 7 8.8.7 [3.17.38.11] CARRGFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaaggggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
331 330 M01495:47:000000000-JFBTW:1:2111:27941:11367_1:N: productive Homsap IGHV3-48*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 1 8 8 7 8.8.7 [3.17.38.11] CARLGLGYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatcaactgggtccgccaggctccagggaaggggctagagtggatttcatacatcagtagtagtggaagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgaggttaggattgggctactggggccagggaaccctcgtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
332 331 M01495:47:000000000-JFBTW:1:2111:23631:11752_1:N: productive Homsap IGHV1-2*02 F 987 94.52 207/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD1-26*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARDLGIVGAAAYAFDIW in-frame + gcttctggatacaccttcaccgactactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagtccttacgatggtgacacagactatgcacagaaatttcagggcagggtcaccatgactagggacacgtccatcagcacagcctacatggagctgagcagcctgacatctgacgacacggccgtgtattactgtgcgagagatctcggtatagtgggagctgccgcctatgcttttgatatctggggccaagggtcaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
333 332 M01495:47:000000000-JFBTW:1:2111:25781:12079_1:N: No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F (see comment) 471 68.02 151/222 nt 67.57 150/222 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found low V-REGION identity (68.02%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release in CDR2-IMGT, from codon 58 of V-REGION: 1 nucleotides (from position 92 in the user submitted sequence), (cause frameshift) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtgtagtggtggtaccacacactacgcagactccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 269 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
334 333 M01495:47:000000000-JFBTW:1:2111:26714:12170_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-12*01 F 3 8 7 18 8.7.18 [3.17.38.11] CARVPSGYERGYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtgccgagtggctacgagagaggttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
335 334 M01495:47:000000000-JFBTW:1:2111:13043:12276_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1064 98.18 216/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-19*01 F 1 8 7 12 8.7.12 [3.17.38.11] CAREKSSGDAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccgtatcagtagacatgtccaagaaccagttctccctgaagttgagctctgtgaccgctgcggacacggccgtatattactgtgcgagagagaagagcagtggcgatgcttttgatatctggggccaagggacaatgatcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
336 335 M01495:47:000000000-JFBTW:1:2111:19442:12887_1:N: productive Homsap IGHV4-59*12 (F) 1091 99.55 219/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARGSHSSGYTDFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggttcccatagtagtggttataccgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
337 336 M01495:47:000000000-JFBTW:1:2111:24573:13149_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARGGATTARFDYW in-frame + gcatctggatacaccttcaccagccagtatatacactgggtgcgacaggcccctggacaagggattgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggggggagccacgaccgctcggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
338 337 M01495:47:000000000-JFBTW:1:2111:27248:13179_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARGPITYNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggacctattacgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
339 338 M01495:47:000000000-JFBTW:1:2111:27101:13459_1:N: productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ6*04 F 198 79.37 50/63 nt Homsap IGHD4-11*01 ORF 2 8 7 14 8.7.14 [3.17.38.11] CARETYSNYGGGVDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagagacctacagtaactacggggggggagtggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
340 339 M01495:47:000000000-JFBTW:1:2111:23934:13751_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1050 97.72 214/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-21*02 F 2 8 8 18 8.8.18 [2.17.38.11] CARVLYCGGDCYFRRWFDPW in-frame + gcttctggttacacctttaccagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggtcctttattgtggtggtgactgctatttccgtcggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
341 340 M01495:47:000000000-JFBTW:1:2111:28491:14347_1:N: productive Homsap IGHV1-8*02 F 1005 95.43 209/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-3*01 F 1 8 8 13 8.8.13 [2.17.38.11] CATDSEGDADAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcaactgggtgcgacaggccactggacaagggcttgagtggatgggaaggatggaccctgagagtggtaaaacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcatcctgagatctgaggacacggccgtgtattactgtgcaacagattcggagggggacgcggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
342 341 M01495:47:000000000-JFBTW:1:2111:28384:14489_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 980 93.27 208/223 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD3-10*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARDYGSGSYYYYYYYYMDVW in-frame + tgcagcctctggattcacctttagtagttatgtcatgagttgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtggtagtggtgttagtacatactacgcaggcttcgtgaagggccggctcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagactatggttcggggagttattattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
343 342 M01495:47:000000000-JFBTW:1:2111:16989:14704_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD1-1*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARGGTGTTYYYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgggactggaacgacttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
344 343 M01495:47:000000000-JFBTW:1:2111:22181:17276_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD4-11*01 ORF 1 8 8 15 8.8.15 [3.17.38.11] CARLQNGHYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagactacagaacgggcactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
345 344 M01495:47:000000000-JFBTW:1:2111:23005:17593_1:N: productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1105 100.00 221/221 nt 99.55 220/221 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 8 7 16 8.7.16 [3.17.38.11] CARAYSGSYGPGDTFDYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 59 of V-REGION: 1 nucleotides (from position 96 in the user submitted sequence), (cause frameshift) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctgggactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagcgtatagtgggagctatggtccgggggacacctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
346 345 M01495:47:000000000-JFBTW:1:2111:2904:18268_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-21*02 F 3 8 8 12 8.8.12 [2.17.38.11] CAIIPGVTATLDYW in-frame + gcttctggtggcaccttcagcagctatgctatcagctgggtgcgacatgcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgccataatcccgggggtgactgctacccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
347 346 M01495:47:000000000-JFBTW:1:2111:19639:19315_1:N: productive Homsap IGHV3-48*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*02 F 2 8 8 15 8.8.15 [3.17.38.11] CARDGRKVVTEYYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggtcggaaagtggtaaccgagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
348 347 M01495:47:000000000-JFBTW:1:2111:21236:19340_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1055 97.73 215/220 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD5-18*01 F 1 8 7 17 8.7.17 [3.17.38.11] CARISTAMVLADYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggatctctacagctatggttctggctgactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
349 348 M01495:47:000000000-JFBTW:1:2111:10585:19356_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD2-8*01 F 1 8 8 12 8.8.12 [3.17.38.11] CAKVRMHVYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtgcgtatgcacgtctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
350 349 M01495:47:000000000-JFBTW:1:2111:8106:19800_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD3-10*01 F 1 8 8 14 8.8.14 [2.17.38.11] CASEFGELSTYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtgagttcggggagttatctacctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
351 350 M01495:47:000000000-JFBTW:1:2111:7142:20617_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F (see comment) 156 78.43 40/51 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARHGSCSGGSCYSEAVEW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatggatcttgtagtggtggtagctgctactccgaggccgtggaatggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
352 351 M01495:47:000000000-JFBTW:1:2111:25557:20868_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD4-17*01 F 2 8 8 15 8.8.15 [3.17.38.11] CVKGLSPYGDLTRGDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagtctctggattcacctttagtaacaatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtgatagtggtggtagcacatactatgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacactctgtatctgctaatgaacagtctgagagccgaggacacggccgtatattactgtgtgaaaggtctgtctccctacggtgacctcacacgtggcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
353 352 M01495:47:000000000-JFBTW:1:2111:9321:20868_1:N:0 productive Homsap IGHV3-48*01 F 1079 98.21 219/223 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD2-15*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARGIVVVVAATPHWYFDLW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagggggattgtagtggtggtagctgctactccccactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
354 353 M01495:47:000000000-JFBTW:1:2111:24689:21207_1:N: unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 696 96.00 144/150 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-16*01 F 3 X 8 16 X.8.16 [X.4.38.11] CARVFEPTNEGRGAFDIW in-frame + rearranged sequence, stop codons atatcgcgagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtctttgaacctaccaatgagggccggggggcttttgatatctggggctaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 262 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
355 354 M01495:47:000000000-JFBTW:1:2111:9502:21442_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARVGVGATTGYFDYW in-frame + tgcaacctctggattcacctttactaattttggcatgagttgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagtgggagtgggagctactacgggctactttgactactggggccagggaaccctggtcaccgactcatcagggagtgcatccgcaccaacccttttcccccacgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
356 355 M01495:47:000000000-JFBTW:1:2111:14026:22006_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 3 8 8 21 8.8.21 [3.17.38.11] CAKEDAVGQQPANLYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagaagacgcggttgggcagcagccagcaaacctttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
357 356 M01495:47:000000000-JFBTW:1:2111:13300:24310_1:N: unproductive Homsap IGHV1-18*01 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-10*01 F 1 8 8 X 8.8.X [2.17.38.11] CARGGGDIVV#W out-of-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggccgctggacaaaggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaaacttcagggcagagtcaccatgacgacagacacagccacgagcacagcttacatggagctgaggagcatgagatctgacgccacggcagtgtattactgtgcgagaggagggggggatattgtagtggtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtcacctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
358 357 M01495:47:000000000-JFBTW:1:2111:13116:24515_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ5*02 F (see comment) 138 74.51 38/51 nt Homsap IGHD2-15*01 F 2 8 8 10 8.8.10 [3.17.38.11] CYRSGGSRASGW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctagtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaggtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgttatcgtagtggtggtagcagagcgtcgggctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
359 358 M01495:47:000000000-JFBTW:1:2111:23030:24588_1:N: productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD6-13*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARSGGLGYSSSPYYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagtgggggtttgggttatagcagcagcccctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
360 359 M01495:47:000000000-JFBTW:1:2111:15992:24674_1:N: productive Homsap IGHV1-2*02 F 1068 98.63 216/219 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD5-18*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARGKLDALGYSYGFYIW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtgatggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggaaacttgacgcgttaggatacagctatggtttctacatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
361 360 M01495:47:000000000-JFBTW:1:2111:11304:24870_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD3-22*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARGDSLVGLPRYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggagactcccttgtgggtcttccgcgttactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
362 361 M01495:47:000000000-JFBTW:1:2109:8818:1483_1:N:0: productive Homsap IGHV3-30*07 F 1088 98.65 220/223 nt Homsap IGHJ1*01 F (see comment) 161 78.85 41/52 nt Homsap IGHD2-21*02 F 2 8 8 15 8.8.15 [3.17.38.11] CATGGRGMYCGGDCYTW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctatggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgactggagggcggggaatgtactgcggaggagactgctatacctggggccagggaaccctggtcagcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
363 362 M01495:47:000000000-JFBTW:1:2109:11077:5498_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F or Homsap IGHV4-34*12 F 1037 96.82 213/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-6*01 F 1 8 7 14 8.7.14 [3.17.38.11] CARGSRLEDGSTLDYW in-frame + cgctgtctatagtgggtccttcagtggttactactggacctggatccgccagcccccagggaagggactggagtggattggggaaatcagtcatagtggaagcaccaactacaacccgtccctcaggagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaacctgagctctgtgaccgccgcggacacggctgtttattactgtgcgagaggtagtcggcttgaggatgggagtacgcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
364 363 M01495:47:000000000-JFBTW:1:2109:9710:5527_1:N:0: productive Homsap IGHV3-48*03 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD6-13*01 F 1 8 8 23 8.8.23 [3.17.38.11] CATRGYSSSWQSWGQGYYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgctacccgcgggtatagcagcagctggcagtcatggggccagggctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
365 364 M01495:47:000000000-JFBTW:1:2109:18999:5793_1:N:0 productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 996 94.98 208/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*02 F 3 8 8 22 8.8.22 [2.17.38.11] CARDLIVVVPAAIPQYYYYGMDVW in-frame + gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatctgattgtagtagtaccagctgctataccgcaatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
366 365 M01495:47:000000000-JFBTW:1:2109:9796:6119_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKSNIRGSSGRAFDIW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtctcaggtattagtggtagtggtggtagcacatacttcgcagactccgtgaagggccgattcaccatctccagagacaattccataaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatcgaatattcggggtagtagtggtcgggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
367 366 M01495:47:000000000-JFBTW:1:2109:22601:6504_1:N:0 productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1051 97.29 215/221 nt 96.83 214/221 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-6*01 F 3 8 8 11 8.8.11 [3.16.38.11] CSRPQVVGAFDIW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 47 of V-REGION: 1 nucleotides (from position 60 in the user submitted sequence), (cause frameshift) aagggttctggatacagttttagcagttactggatcggctgggtgcgccagatgcccggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtcctttcaaggccaggtcaccaactcagccgacaagtccatcagcaccgcctaccttcagtggagcagcctgaaggcctcggacaccgccatgtattactgttcgagaccgcaggtcgtgggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 349 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
368 367 M01495:47:000000000-JFBTW:1:2109:9033:6791_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 707 98.62 143/145 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD2-21*02 F 2 X 8 14 X.8.14 [X.2.38.11] CAKVGDPNGYWYFDLW in-frame + ctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttctccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccatatattactgtgcgaaagtcggtgaccccaatgggtactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 251 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
369 368 M01495:47:000000000-JFBTW:1:2109:9309:7155_1:N:0: productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD2-2*02 F 3 8 8 19 8.8.19 [2.17.38.11] CARDVVVPAAILGYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagacgtagtagtaccagctgctatactgggatactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
370 369 M01495:47:000000000-JFBTW:1:2109:22866:7352_1:N:0 productive Homsap IGHV4-38-2*01 F 1106 99.55 222/223 nt Homsap IGHJ6*04 F (see comment) 179 77.05 47/61 nt Homsap IGHD2-15*01 F 1 9 7 9 9.7.9 [3.17.38.11] CFQYRGEQDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cgctgtctctggttactccatcagaagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtttccagtataggggggagcaggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
371 370 M01495:47:000000000-JFBTW:1:2109:6037:7378_1:N:0: productive Homsap IGHV3-48*01 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-13*01 F 3 8 8 12 8.8.12 [3.17.38.11] CAKDTEQLYYFDCW in-frame + tgcagcctctggattcactttcagtagtgatgccatgaactgggtaagcaaggctccagggaaggggctggagtgggtttcatacattagtagtggtagtgctaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaaaacctcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatacggagcagctgtactactttgactgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
372 371 M01495:47:000000000-JFBTW:1:2109:20924:7497_1:N:0 productive Homsap IGHV1-2*02 F 1105 100.00 221/221 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARRVVGATLAFDIW in-frame + aggcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgaggcgggtagtgggagctacactagcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 324 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
373 372 M01495:47:000000000-JFBTW:1:2109:14361:7605_1:N:0 productive Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*01 F 2 8 8 9 8.8.9 [3.17.38.11] CARGKGGVDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtaaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaggcaagggtggcgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
374 373 M01495:47:000000000-JFBTW:1:2109:25609:7805_1:N:0 productive Homsap IGHV1-18*01 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-8*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARGPSTTDILDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgaggacacggccgtgtattactgtgcgagaggcccgtcaactactgatatactggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
375 374 M01495:47:000000000-JFBTW:1:2109:16242:8007_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-3*02 F 1 8 8 16 8.8.16 [3.17.38.11] CAKRAAYLSWYYYYMDVW in-frame + tgcagcctctgggttcacctttagcgactatgccatgaactgggtccgccaggctccagggcaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaagggctgcttatttgtcgtggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
376 375 M01495:47:000000000-JFBTW:1:2109:11567:8244_1:N:0 productive Homsap IGHV3-7*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-20*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARESNGITTRVYW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaatcgaacggcataactacccgggtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
377 376 M01495:47:000000000-JFBTW:1:2109:22027:9195_1:N:0 productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 730 100.00 146/146 nt 99.32 145/146 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 2 8 X 13 8.X.13 [3.7.30.11] CATPASGSGNLLQYW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 46 of V-REGION: 76 nucleotides (from position 57 in the user submitted sequence), (cause frameshift) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgactccagcgtccggttcggggaaccttctacagtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 280 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
378 377 M01495:47:000000000-JFBTW:1:2109:27338:9312_1:N:0 productive Homsap IGHV1-2*02 F 870 88.58 194/219 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 210 90.20 46/51 nt Homsap IGHD6-19*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARDGSGECTGSACYRWVDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) gcttctggatacagcttcagcgactattatctgaactgggtgcgacaggcccctggacaagggcctgagtggatgggatggatcagcccgaagagtggtgacaccaagtatgcacagaaatttcagggcaggatcaccatgaccagggacacgtccatcaccacagcctacatggaactgaatagtctaacatctgacgacatggccgtatattattgtgcgcgagacgggtcgggggaatgcactgggtccgcctgttatagatgggtcgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaggattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
379 378 M01495:47:000000000-JFBTW:1:2109:29004:9466_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARHVGGGGDLDYW in-frame + aagggctctggatacagctttaccagctactggatcggctgggcgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagctcgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtgggtggaggaggagaccttgactactggggccagggaaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
380 379 M01495:47:000000000-JFBTW:1:2109:10910:9482_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD1-7*01 F 1 8 8 19 8.8.19 [3.17.38.11] CARTATGTTSILYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaacagcaactggaactacgtctatcctctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
381 380 M01495:47:000000000-JFBTW:1:2109:19140:9619_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARLGIAVAGSCYGVMDCW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgggtatagcagtggctggtagctgctacggcgtcatggattgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
382 381 M01495:47:000000000-JFBTW:1:2109:20447:10202_1:N: productive Homsap IGHV3-11*06 F, or Homsap IGHV3-21*05 (F) 1043 96.41 215/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 8 8.8.8 [3.17.38.11] CARAPYYGYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagccccctactacggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
383 382 M01495:47:000000000-JFBTW:1:2109:11449:10629_1:N: productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) or Homsap IGHV4-4*10 (F) 615 90.00 135/150 nt Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD3-16*01 F 3 X 7 13 X.7.13 [X.5.38.11] CARVAGGTFGGVDQW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) atatcgcgaggggaaatctatcattctgggagcaccaactacagcccgtccctcaagagtcgagtcaccatatcagtagacaagtcgaagaaccagttctccgtgaggctgaactctgcgaccgccgcggacacggccgtgtattactgtgcgagagttgcgggaggaacgtttgggggtgtcgaccagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 253 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
384 383 M01495:47:000000000-JFBTW:1:2109:20102:11399_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1089 96.15 225/234 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [7.17.38.11] CARGGLLYYYDSSEDYW in-frame + agactctcctgtgcagtctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagaggcgggttattgtattactatgatagtagtgaggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 343 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
385 384 M01495:47:000000000-JFBTW:1:2109:8016:11492_1:N:0 productive Homsap IGHV3-30*01 F, or Homsap IGHV3-30*06 F or Homsap IGHV3-30*08 F or Homsap IGHV3-30*11 F or Homsap IGHV3-30*16 F 830 100.00 166/166 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD4-17*01 F 3 X 8 14 X.8.14 [X.9.38.11] CARAPPVFYYYYMDVW in-frame + aggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagcccctccggtcttctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 272 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
386 385 M01495:47:000000000-JFBTW:1:2109:16037:11741_1:N: productive Homsap IGHV3-11*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKGLVVVPQGPFDYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggccttgtagtagtaccacaggggccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
387 386 M01495:47:000000000-JFBTW:1:2109:5683:11839_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARKWVVGAYYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaaaatgggtagtgggagcttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
388 387 M01495:47:000000000-JFBTW:1:2109:24609:12040_1:N: productive Homsap IGHV4-34*03 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARGGFRYGSRFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattattgtgcgagaggaggatttcggtatggatctcgctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
389 388 M01495:47:000000000-JFBTW:1:2109:28479:12173_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-21*01 F 2 8 7 22 8.7.22 [3.17.38.11] CARLYSARLNRHLPYCGGDCYGYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagactctattctgcgcggctcaatcgccacctcccatattgtggtggtgattgctatgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
390 389 M01495:47:000000000-JFBTW:1:2109:11023:12201_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 989 93.72 209/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDYYGSGSYYIDYFDYW in-frame + tacagcttctggattcacctttggtgattatgctatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagattactatggttcggggagttattatattgactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
391 390 M01495:47:000000000-JFBTW:1:2109:27220:12890_1:N: productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1086 99.54 218/219 nt Homsap IGHJ1*01 F (see comment) 152 76.92 40/52 nt Homsap IGHD5-18*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARGGGYSYGFGLHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggggaggatacagctatggttttgggctccactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
392 391 M01495:47:000000000-JFBTW:1:2109:16829:13005_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1082 99.09 218/220 nt Homsap IGHJ1*01 F 242 96.15 50/52 nt Homsap IGHD3-10*01 F 3 8 7 13 8.7.13 [3.17.38.11] CAGVRAATSEYFQHW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatacttcgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtatttctgtgcgggagttcgggctgctactagtgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
393 392 M01495:47:000000000-JFBTW:1:2109:25257:14518_1:N: productive Homsap IGHV1-8*02 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-11*01 ORF 3 8 8 16 8.8.16 [2.17.38.11] CARVRDIGHRIPTGFDYW in-frame + gcttctggttacacctttatcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttagagacataggtcatagaatacccaccgggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
394 393 M01495:47:000000000-JFBTW:1:2109:7698:14802_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1014 95.89 210/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD5-24*01 ORF 2 8 8 18 8.8.18 [2.17.38.11] CARGTWLPTKNYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggacatggttacccacgaaaaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
395 394 M01495:47:000000000-JFBTW:1:2109:13455:15042_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1051 99.53 211/212 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-19*01 F 3 8 7 19 8.7.19 [0.17.38.11] CARDGKGQWLVRGGRNWFDPW in-frame + ctggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagacggcaaagggcagtggctggtacgtgggggaagaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
396 395 M01495:47:000000000-JFBTW:1:2109:25125:15337_1:N: productive Homsap IGHV3-48*03 F 1025 95.52 213/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 3 8 8 17 8.8.17 [3.17.38.11] CARGTQPPGLYYYYGMDVW in-frame + tgcagcctctggattcaagttcagtagttcctggatgcattgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctatttattactgtgcgagagggactcaaccccctggactttactactactacggtatggatgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
397 396 M01495:47:000000000-JFBTW:1:2109:12678:15522_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 202 86.79 46/53 nt Homsap IGHD2-8*02 F 2 8 7 8 8.7.8 [3.17.38.11] CATGGGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgactggtggcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
398 397 M01495:47:000000000-JFBTW:1:2109:4775:15555_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD2-2*01 F 3 8 7 21 8.7.21 [3.17.38.11] CARDRVVVVPAANYYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatcgggttgtagtagtaccagctgctaattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
399 398 M01495:47:000000000-JFBTW:1:2109:27982:15653_1:N: productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD4-17*01 F 3 8 8 17 8.8.17 [2.17.38.11] CAREERRSTVTSAAWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcaagagaagaacgaaggagtacggtgacctcggccgcctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
400 399 M01495:47:000000000-JFBTW:1:2109:16489:16177_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD2-2*02 F 2 8 8 20 8.8.20 [3.17.38.11] CARGRKPRCSSTSCYTWGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagaggccggaaaccccgttgtagtagtaccagctgctatacgtggggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
401 400 M01495:47:000000000-JFBTW:1:2109:7312:17467_1:N:0 No rearrangement found Homsap IGHV5-51*05 F 984 95.77 204/213 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 302 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
402 401 M01495:47:000000000-JFBTW:1:2109:9668:18058_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F (see comment) 213 93.75 45/48 nt Homsap IGHD2-21*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARGLCGGDCYFDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaactccaagaactcactctttctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagggctttgtggtggtgattgctattttgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
403 402 M01495:47:000000000-JFBTW:1:2109:6438:19179_1:N:0 productive Homsap IGHV1-18*04 F 942 92.24 202/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD6-6*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARGYSSSGWFDPW in-frame + gcctctggatacaccgtacctagctactatatgcactgggagcgacaggcccctggacaagggcatgagtggatgggagggatcagcgcttacaatggtaacactaacgatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgaaacggccgtgtattactgtgcgagaggatacagcagctcaggctggttcgacccatggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
404 403 M01495:47:000000000-JFBTW:1:2109:27585:19717_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARRADHYDSSAYYFW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtctattactgtgcgagaagggcagatcactatgatagtagtgcttattacttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
405 404 M01495:47:000000000-JFBTW:1:2109:22597:19928_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 9 8.8.9 [3.17.38.11] CANRIGGFAYW in-frame + tgcagcctctggattcacctttagcagctatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtggtagtggtggtaccacatactacgcagactccgtgaagggccggttcaccgtctccagagacaactccaagaacacgctggatctgcaaatggacagcctgagagccgaagacacggccgtatattactgtgcgaataggattggtggctttgcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
406 405 M01495:47:000000000-JFBTW:1:2109:18008:20319_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD4-23*01 ORF 2 8 7 18 8.7.18 [3.17.38.11] CARAADYGGYIYYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagctgccgactacggtggatatatctactactactactacatggacgtctggggcaaagggaccacggtaaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
407 406 M01495:47:000000000-JFBTW:1:2109:3741:20375_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1037 96.82 213/220 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-16*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARVSRYEGGGAMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtggttattactggagctggatccggcagcccccagggaagggactggagtggattggctatatctattacagtgggagcaccaactacaatccctccctcaagagtcgagtcaccatatcagtagacacgaccaagaaccagttctccctgaaggtgagctctgtgaccgctgcggacacggccgtgtattcctgtgcgagagtttcaaggtatgagggaggcggcgctatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacacgtttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
408 407 M01495:47:000000000-JFBTW:1:2109:16155:20621_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARDRDYDSSGYYYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatagggactatgatagtagtggttattactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
409 408 M01495:47:000000000-JFBTW:1:2109:12678:20996_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD5-24*01 ORF 3 8 8 13 8.8.13 [3.17.38.11] CARRDGYNPDALDIW in-frame + gaggcttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctctcctggtgactctgataccagatatagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagaagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggatggctacaaccccgatgcccttgatatctggggccaagggacactggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
410 409 M01495:47:000000000-JFBTW:1:2109:25840:21137_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [2.17.38.11] CAREYGDYVWLVDW in-frame + other possibilities: Homsap IGHJ6*01 and Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggagtacggcgactacgtttggctggtcgactggggccagggaaccccggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
411 410 M01495:47:000000000-JFBTW:1:2109:13635:21244_1:N: productive Homsap IGHV2-5*02 F 1245 100.00 249/249 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD2-21*01 F 3 10 7 12 10.7.12 [11.17.38.11] CAHRQSAKRVIDPW in-frame + acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacagacagagtgctaaaagggtgatcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
412 411 M01495:47:000000000-JFBTW:1:2109:13422:21885_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 8 16 8.8.16 [3.17.38.11] CTRLEGGCGGGSCHPDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatgctggtgactctgataccagatacaacccgtccttccaagcccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtacgagactagagggtggatgtggtggtggtagctgccaccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
413 412 M01495:47:000000000-JFBTW:1:2109:10217:22450_1:N: unproductive (see comment) Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-19*01 F 2 8 8 X 8.8.X [2.17.38.11] CASPSGGDSGWRTT#DAFDIW out-of-frame + rearranged sequence, stop codons gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcccctcggggggggacagtggctggcgaactacctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
414 413 M01495:47:000000000-JFBTW:1:2109:17170:22717_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-13*01 F 2 8 7 14 8.7.14 [3.17.38.11] CAREGIAAAGTRVDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagagggtatagcagcagctggtacgcgggtagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
415 414 M01495:47:000000000-JFBTW:1:2109:5642:22743_1:N:0 productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1068 98.63 216/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 1 8 8 22 8.8.22 [2.17.38.11] CARAVLRFLEWTDRIDYYYGMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattattgtgcgagagccgtattacgatttttggagtggacggatcggatcgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
416 415 M01495:47:000000000-JFBTW:1:2109:15103:23233_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-2*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARGGSGDIVVVPAAYGAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggagggtcgggggatattgtagtagtaccagctgcctacggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
417 416 M01495:47:000000000-JFBTW:1:2109:10535:23602_1:N: productive Homsap IGHV1-8*01 F 1005 95.43 209/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-10*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARGPRGVAFDIW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaaaagtggtaacacaggctacacgcagaaattccagggcagagtcaccatgaccagggacacctccataaatacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagggggccccgcggggttgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
418 417 M01495:47:000000000-JFBTW:1:2109:8265:24753_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARGGGKLPYGDYGEDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcggtgggaagttaccctacggtgactacggcgaggattactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
419 418 M01495:47:000000000-JFBTW:1:2108:13952:1552_1:N:0 productive Homsap IGHV3-48*04 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-14*01 ORF 2 8 8 8 8.8.8 [3.17.38.11] CGRGVVPDYW in-frame + tgcagcctctggattcacctttagtagctattggatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagctgaggacacggctgtgtattactgtggaagaggggtagtaccagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
420 419 M01495:47:000000000-JFBTW:1:2108:12105:1854_1:N:0 productive Homsap IGHV3-21*04 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
421 420 M01495:47:000000000-JFBTW:1:2108:11836:1999_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-21*02 F 2 8 7 16 8.7.16 [3.17.38.11] CARDIRGGDFTYDAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatatcaggggtggtgactttacatatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
422 421 M01495:47:000000000-JFBTW:1:2108:22913:2666_1:N:0 productive Homsap IGHV3-7*03 F 971 92.83 207/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDRGGATIRDYW in-frame + tgcagcctctggattcacctttagtgcctattggatgggctgggtccgccaagctccagggcaggggctggagtgggtggccagcataaagccagatggaaatgagaaatactatatgagctctgtgaagggccgattcaccatcttcagggacaacgccgacaactcactgtatctgcaaatgaacggcctgagagccgaggacacggccgtgtattactgtgcgagagatcgggggggagccactattcgtgactactggggccagggaaccctggtcaccgtctcctcacggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
423 422 M01495:47:000000000-JFBTW:1:2108:23114:2966_1:N:0 productive Homsap IGHV4-38-2*01 F 1052 96.86 216/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 9 7 18 9.7.18 [3.17.38.11] CARLPTGYCSGGSCNWFDPW in-frame + cgctgtctctggttactccatcggcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacagcccgtccctcaggggtcgagtcaccatatcactagacacgtctaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattcctgtgcgagactcccaaccggatattgtagtggtggtagctgtaattggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
424 423 M01495:47:000000000-JFBTW:1:2108:12657:3237_1:N:0 productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARVTGYGDYWYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtcacgggatacggtgactactggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
425 424 M01495:47:000000000-JFBTW:1:2108:15963:3602_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 658 91.61 142/155 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-25*01 F 1 X 8 12 X.8.12 [X.5.38.11] CARVPYSSGYKDYW in-frame + atatcgcgaggggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagttccgtatagcagtggctacaaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 255 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
426 425 M01495:47:000000000-JFBTW:1:2108:13350:4412_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD6-6*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARGSIAARLAVLDMDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggggagtatagcagctcgtcttgcagtcctagacatggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
427 426 M01495:47:000000000-JFBTW:1:2108:26033:4546_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKDLITMVRGVRGDYW in-frame + tgcagcgtctggattcagattcagtagctatggcatgcactgtgtccgccaggctccaggcagggggctggagtgggtggcaattatatggttcgatggaagttacaaatactatggagactccgtgaagggccgattcaccatctccagagacaattacaagaatacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagacctcattactatggttcggggagttaggggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
428 427 M01495:47:000000000-JFBTW:1:2108:15263:5539_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-16*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARVYDFGGYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtttatgatttcgggggctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
429 428 M01495:47:000000000-JFBTW:1:2108:6904:5765_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD6-25*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKDLAAATYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtggtagtggtggtaccacacactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
430 429 M01495:47:000000000-JFBTW:1:2108:10116:6078_1:N:0 productive (see comment) Homsap IGHV1-2*02 F, or Homsap IGHV1-2*04 F or Homsap IGHV1-2*07 F 846 99.42 170/171 nt 98.83 169/171 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD5-18*01 F 3 8 6 14 8.6.14 [2.17.24.11] CARDGYNNGRGWFDPW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 64 of V-REGION: 48 nucleotides (from position 100 in the user submitted sequence), (do not cause frameshift) acttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtgacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatggatacaataatggccgggggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 308 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
431 430 M01495:47:000000000-JFBTW:1:2108:17215:6277_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDLYCSSTSCPFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatctctattgtagtagtaccagctgcccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
432 431 M01495:47:000000000-JFBTW:1:2108:21214:6679_1:N:0 productive Homsap IGHV3-30*07 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD3-3*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARVQYDFWSGYPKEGYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtgcagtacgatttttggagtggttatcccaaggagggatactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
433 432 M01495:47:000000000-JFBTW:1:2108:8820:6690_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 876 99.44 176/177 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD4-23*01 ORF 2 X 8 10 X.8.10 [X.13.38.11] CARDVWAGADYW in-frame + cgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtctattactgtgcgagagatgtctgggctggtgcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 271 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
434 433 M01495:47:000000000-JFBTW:1:2108:3885:6855_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARPNDSSGDDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccgaatgatagtagtggtgacgatgcctttgatatctggggccaagggaaaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
435 434 M01495:47:000000000-JFBTW:1:2108:18521:7442_1:N:0 unproductive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 8 X 8.8.X [2.17.38.11] CARGTTVTTVS#DYW out-of-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaactacggtgactacggtttcgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 352 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
436 435 M01495:47:000000000-JFBTW:1:2108:27266:8122_1:N:0 unproductive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 2 8 8 X 8.8.X [2.17.38.11] CARSEELEPTIFGVVIM#YYGMDVW out-of-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagatcggaagaactggaaccgacgatttttggagtggttattatggctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 382 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
437 436 M01495:47:000000000-JFBTW:1:2108:17077:8233_1:N:0 productive Homsap IGHV2-5*02 F 1245 100.00 249/249 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 1 10 7 18 10.7.18 [11.17.38.11] CAHGLGVLRFLEWSTTFDYW in-frame + acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacatggcttaggagtattacgatttttggagtggtccacaacctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 398 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
438 437 M01495:47:000000000-JFBTW:1:2108:28426:8463_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-19*01 F 1 8 7 19 8.7.19 [3.17.38.11] CARVGHSSGWSYYYYYGMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagtaggccatagcagtggctggtcgtactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccgacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
439 438 M01495:47:000000000-JFBTW:1:2108:24396:8859_1:N:0 productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-6*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARDLYSSSSFW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcgagagatctgtatagcagctcgtccttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
440 439 M01495:47:000000000-JFBTW:1:2108:13593:9152_1:N:0 productive Homsap IGHV1-2*02 F 978 94.06 206/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 1 8 8 10 8.8.10 [2.17.38.11] CASRNSTSGDYW in-frame + gcttctggatacaccttcaccgactactatgtacactgggtgcgacaggcccctggacaagggcttgagtggatggggtggatcaaccctgacagtggtggcacaacctctgcacagaactttcagggcagggtcaccatgaccagggacacgtccgtcagcacagcctatatggagctgagcagactgagatctgacgacacggccatgtatttctgtgcgagtcgcaatagcacgtcgggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
441 440 M01495:47:000000000-JFBTW:1:2108:5765:9373_1:N:0: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD3-3*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARDKRFLEWLCQMDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagataagcgatttttggagtggttatgccaaatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgcctcaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
442 441 M01495:47:000000000-JFBTW:1:2108:4339:9818_1:N:0: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD3-10*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARDGYYYYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagacgggtattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
443 442 M01495:47:000000000-JFBTW:1:2108:7840:10745_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1097 99.10 221/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAREADDSSGYIRDAFDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtactagtggttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaggccgatgatagtagtggttatattagggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
444 443 M01495:47:000000000-JFBTW:1:2108:18478:11083_1:N: unproductive (see comment) Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 3 8 8 22 8.8.22 [3.17.38.11] CARSGIVVVPAAAVWNYYYGMDVW in-frame + rearranged sequence, stop codons tgcagcctctggattcaccttcagtagttaggaaaggaactgggtccgccaggctgcagggaaggggctggagtgggttgcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggagcgggattgtagtagtaccagctgctgccgtgtggaactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
445 444 M01495:47:000000000-JFBTW:1:2108:18963:11268_1:N: productive Homsap IGHV4-59*12 (F) 1082 99.09 218/220 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD2-2*02 F 1 8 7 14 8.7.14 [3.17.38.11] CARDQREQQQLYPGYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgaggtctgtgaccgccgcggacacggctgtgtattactgtgcgagagatcaacgcgagcagcagcagctatatcccggctactggggccagggaacgctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
446 445 M01495:47:000000000-JFBTW:1:2108:8711:11790_1:N:0 productive Homsap IGHV4-61*01 F 1112 99.12 224/226 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-22*01 F 1 10 7 16 10.7.16 [3.17.38.11] CARDPRYTQRSKDAFDIW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcacgaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagacccaagatatacccaacgatcaaaggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttcccccctcgtctcctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
447 446 M01495:47:000000000-JFBTW:1:2108:22898:11938_1:N: productive Homsap IGHV1-69*10 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 196 97.56 40/41 nt 8 8 4 8.8.4 [2.17.38.11] CASGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatccttggtatagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 326 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
448 447 M01495:47:000000000-JFBTW:1:2108:25446:12265_1:N: productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F or Homsap IGHV5-51*06 (F) 919 97.91 187/191 nt 97.38 186/191 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-16*01 F 1 8 8 12 8.8.12 [3.17.27.11] CARHLRGFDAFDIW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 66 of V-REGION: 31 nucleotides (from position 110 in the user submitted sequence), (cause frameshift) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcacctatcctggcgactctgatgccacatctcagccgacaagtccatcagcacctcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatctgcgtgggtttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccacaaccattttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 322 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
449 448 M01495:47:000000000-JFBTW:1:2108:3331:13324_1:N:0 productive Homsap IGHV1-8*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-2*01 F 3 8 8 24 8.8.24 [2.17.38.11] CARKALVVVPAAQTPQVDTASYFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgcggaaggcccttgtagtagtaccagctgcccagacccctcaggtggatacagctagctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
450 449 M01495:47:000000000-JFBTW:1:2108:12070:13346_1:N: productive Homsap IGHV4-34*03 F 1023 96.35 211/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-21*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARVGGGDVEDAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagccccccgggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagtcggtggcggtgatgttgaggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
451 450 M01495:47:000000000-JFBTW:1:2108:6993:13474_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD1-1*01 F 1 8 8 18 8.8.18 [3.17.38.11] CASRTPGKKRTNGMDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagccggacacccggaaaaaagcggacgaacgggatggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
452 451 M01495:47:000000000-JFBTW:1:2108:8948:13586_1:N:0 productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-6*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDLSSSSPVFDYW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagggatcttagcagctcgtccccagtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
453 452 M01495:47:000000000-JFBTW:1:2108:11387:15020_1:N: productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-21*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARGIGTEYYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtactatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagggggattgggaccgaatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
454 453 M01495:47:000000000-JFBTW:1:2108:26674:15094_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 1 8 8 20 8.8.20 [3.17.38.11] CARSLDQVGATTYYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggtccttggaccaagtgggagctaccacctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccgtgagaattcccctcgcgatat 0 0 376 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
455 454 M01495:47:000000000-JFBTW:1:2108:24820:15523_1:N: productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARDRREYCSSTSCSPGSDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcgtcgggagtattgtagtagtaccagctgctccccggggtctgactactggggccagggaacccaggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
456 455 M01495:47:000000000-JFBTW:1:2108:23324:16163_1:N: unproductive Homsap IGHV3-7*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-3*01 F 1 8 8 X 8.8.X [3.17.38.11] CASGYTTPPRR#YW out-of-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagcgggtatacaacccccccccgtcgaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
457 456 M01495:47:000000000-JFBTW:1:2108:12624:16285_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARRGVYSSGPDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgtggcgtttatagcagtggcccggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
458 457 M01495:47:000000000-JFBTW:1:2108:24951:16357_1:N: unproductive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-24*01 ORF 2 8 8 X 8.8.X [3.17.38.11] CARALVEMATIRR##DYW out-of-frame + rearranged sequence, stop codons tgcagcctctggattcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcgaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagctctcgtagagatggctacaattaggaggggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
459 458 M01495:47:000000000-JFBTW:1:2108:20901:16824_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD5-12*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARGYSGYDSFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggatatagtggctacgactcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
460 459 M01495:47:000000000-JFBTW:1:2108:5716:16992_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 8 20 8.8.20 [3.17.38.11] CAKDRRPIGCSGGSCYRGFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtgctcgtgatggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcgtcggccgattggttgtagtggtggtagctgctaccgggggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
461 460 M01495:47:000000000-JFBTW:1:2108:25580:17182_1:N: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1055 95.63 219/229 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-3*01 F 2 8 10 14 8.10.14 [3.17.38.11] CTTAFNYDFWSGCLYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtaccacagcgttcaattacgatttttggagtggttgcctctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
462 461 M01495:47:000000000-JFBTW:1:2108:18849:18208_1:N: productive Homsap IGHV1-2*04 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARDRPGIVGATVPFADYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatcgccctgggatagtgggagctaccgttccctttgctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
463 462 M01495:47:000000000-JFBTW:1:2108:15975:18225_1:N: No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 290 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
464 463 M01495:47:000000000-JFBTW:1:2108:8226:19110_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAREIKYCSGGSCYSGGYW in-frame + aagggttctggatatagttttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagagatcaaatattgtagtggtggtagctgctactctggtggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
465 464 M01495:47:000000000-JFBTW:1:2108:14060:20489_1:N: productive Homsap IGHV1-24*01 F 1014 95.89 210/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-3*01 F 2 8 8 16 8.8.16 [2.17.38.11] CASRSYQVLAPQSAFDIW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtaggtcatatcaagttctcgccccccagtctgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
466 465 M01495:47:000000000-JFBTW:1:2108:13388:20809_1:N: productive Homsap IGHV4-34*03 F 1005 95.43 209/219 nt Homsap IGHJ2*01 F 175 81.13 43/53 nt Homsap IGHD1-26*01 F 3 8 7 12 8.7.12 [3.17.38.11] CAGVSGAYTLGDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccctccctcaagagtcgagtcaccatttcagtggacacgtccaagagccagttcttcctgcagctgacctctgtgaccgctacggacacggccgtgtattattgtgcgggagtcagtggggcctacacactgggggatatctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
467 466 M01495:47:000000000-JFBTW:1:2108:7602:21302_1:N:0 productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-8*02 F 3 8 8 15 8.8.15 [2.17.38.11] CARSEVEYGAPNPFDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggtccgaggtggagtatggggccccaaacccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
468 467 M01495:47:000000000-JFBTW:1:2108:9085:21776_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDMGWLLASPGYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatatggggtggttattagcctcccctgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
469 468 M01495:47:000000000-JFBTW:1:2108:24897:22849_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARPILAAAGTTAFDIW in-frame + aagggttctggatacaactttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggcctatattagcagcagctggtactacggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
470 469 M01495:47:000000000-JFBTW:1:2108:24043:22865_1:N: unproductive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 993 94.14 209/222 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 120 70.59 36/51 nt Homsap IGHD5-18*01 F 2 8 8 X 8.8.X [3.17.38.11] CRRHNSGDSPWYYNYGMD#W out-of-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctgtatacagctttacctgctactggatcggcttggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggttactctgataccagatacagcccgttcttccaagtccaggtcaccatctcagctgacaagtccatcagcacctcctaccttcagttgagcggcttgaaggcctcgaacaccgccatgtattactgtcggagacataattccggcgattctccgtggtactacaactacggtatggaccttggggccaagggaccacggtcaccgtctcctcgggaaggaagtcctgtgagaattcccctcgcgatat 0 0 343 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
471 470 M01495:47:000000000-JFBTW:1:2108:20830:22988_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-3*01 F 2 10 7 15 10.7.15 [3.17.38.11] CARGGDYDFWSGWFDPW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcggtgattacgatttttggagtggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
472 471 M01495:47:000000000-JFBTW:1:2108:23224:23564_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARVFPLVGATAVDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtctttcctctagtgggagctacggcggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
473 472 M01495:47:000000000-JFBTW:1:2108:18924:24845_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-9*01 F 2 8 8 12 8.8.12 [3.17.38.11] CATGPRNSGAFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgacggggcctcgtaattcaggggcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
474 473 M01495:47:000000000-JFBTW:1:2107:21755:1692_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F, or Homsap IGHJ4*03 F (see comment) 168 83.33 40/48 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARDPPAPEHGDYVYW in-frame + other possibilities: Homsap IGHJ1*01 (highest number of consecutive identical nucleotides) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctacctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagagccgaggacacggccgtctattactgtgcgagagatcccccggcccctgagcacggtgattatgtgtactggggccagggcaccctggtcaccgtctcctcagggagtgcatgcgcccgaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
475 474 M01495:47:000000000-JFBTW:1:2107:13242:2425_1:N:0 productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-9*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARTTSYYGVDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaagccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaacaactagttactatggagttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
476 475 M01495:47:000000000-JFBTW:1:2107:9804:2596_1:N:0: unproductive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD3-22*01 F 2 8 7 23 8.7.23 [3.17.38.11] CARAFPKLPRDYHDSSG*YWYFDLW in-frame + rearranged sequence, stop codons cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagccttcccaaaactcccgcgggattaccatgatagtagtggttagtactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
477 476 M01495:47:000000000-JFBTW:1:2107:13920:2882_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARREHYDNSGYKYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggaacactatgataatagtggttataaatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
478 477 M01495:47:000000000-JFBTW:1:2107:14055:2886_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARSCSSTSCGYYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaagttgtagtagtaccagctgcggttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
479 478 M01495:47:000000000-JFBTW:1:2107:15811:3106_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ1*01 F 260 100.00 52/52 nt Homsap IGHD4-23*01 ORF 2 8 7 17 8.7.17 [3.17.38.11] CARGTIDYGGNSAEYFQHW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggtacaattgactacggtggtaactccgctgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
480 479 M01495:47:000000000-JFBTW:1:2107:18112:3293_1:N:0 productive Homsap IGHV3-66*01 F, or Homsap IGHV3-66*02 F or Homsap IGHV3-66*04 F 992 94.55 208/220 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD2-15*01 F 2 8 7 10 8.7.10 [3.17.38.11] CARDCSGGFDPW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagattgtagtggtgggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
481 480 M01495:47:000000000-JFBTW:1:2107:20744:3413_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD3-10*01 F 1 8 8 17 8.8.17 [3.17.38.11] CAKDPWFGGSLDYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatccatggttcgggggcagtcttgactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
482 481 M01495:47:000000000-JFBTW:1:2107:5241:4005_1:N:0: unproductive (see comment) Homsap IGHV1-18*01 F (see comment) 973 94.04 205/218 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [1.17.38.11] SASYCSSTSCYLHYYYGMD*R in-frame + rearranged sequence, stop codons; TRP 118 not identified 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cttctggttacacttgtaccagctatggtatcagctgggtgcgaaaggcccctggacatgtgcttgagtggatgggatggatcagcgcttacaatggtaacacaaacaatgcacagaagctccagggcagagtcaccatgaccacatacacatccgccagcacagcctacatggagctgagcagcctgggatctgaggacacggccgtgtattactctgcgagctattgtagtagtaccagctgctatcttcactactactacggtatggactaaaggggccaagggaccacggtcaccgtctcctcaggaggtgcatacgacccgaacctgttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
483 482 M01495:47:000000000-JFBTW:1:2107:12473:4019_1:N:0 productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD1-26*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARDKGTIVGATKGWFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagtctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagataaggggactatagtgggagctaccaagggttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
484 483 M01495:47:000000000-JFBTW:1:2107:7644:5920_1:N:0: unproductive (see comment) Homsap IGHV3-30*07 F, or Homsap IGHV3-30*12 F (see comment) 474 78.21 122/156 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD2-2*02 F 2 X 8 18 X.8.18 [X.6.38.11] CARDCSSWDTANDCYYMDVW in-frame + rearranged sequence, stop codons low V-REGION identity (78.21%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ctatgcgccttgccagcccgctcagcatagtagtggggaattctcacaggagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagggactgttcgagctgggatacagctaatgattgctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 274 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
485 484 M01495:47:000000000-JFBTW:1:2107:19159:6123_1:N:0 productive Homsap IGHV4-38-2*01 F 1097 99.10 221/223 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-10*02 F 2 9 7 9 9.7.9 [3.17.38.11] CARVVRAFDIW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagttgttcgggcttttgatatctggggccaagggacaatgatcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
486 485 M01495:47:000000000-JFBTW:1:2107:26089:7379_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F or Homsap IGHV4-34*08 F 876 99.44 176/177 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-15*01 F 3 X 7 22 X.7.22 [X.14.38.11] CARHHYFDQKGIVVVVAGRWFDPW in-frame + atccgccagcccccaggtaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagacaccactattttgaccagaagggtattgtagtggtggtagcaggtcgatggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 307 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
487 486 M01495:47:000000000-JFBTW:1:2107:3888:7960_1:N:0: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1074 98.20 218/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARGRYSGSYSPFDYW in-frame + aaggcttctggaggcaccttcagcagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagaggtcgctatagtgggagctactcaccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
488 487 M01495:47:000000000-JFBTW:1:2107:7832:8433_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARLQAAAGTPEGDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagactccaagcagcagctggtactcccgaaggagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
489 488 M01495:47:000000000-JFBTW:1:2107:23970:8562_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*10 F or Homsap IGHV1-69*14 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARASNSSGWFRPSHFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatccttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgtcaaatagcagtggctggtttcgtccttcccattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaggaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
490 489 M01495:47:000000000-JFBTW:1:2107:25001:9182_1:N:0 productive Homsap IGHV1-18*01 F 996 94.98 208/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 3 8 8 24 8.8.24 [2.17.38.11] CARGADIVVVPAAIVGANYYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatagtaacacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggcggatattgtagtagtaccagctgctatcgtgggagcaaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
491 490 M01495:47:000000000-JFBTW:1:2107:23729:9658_1:N:0 productive Homsap IGHV3-33*03 F, or Homsap IGHV3-33*08 F 944 91.48 204/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*01 F 3 8 8 24 8.8.24 [3.17.38.11] CAKDWVVVPAATILRGGITGTSNDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggttcgccaggctccaggcaaggggctggagtgggtggcaattatatggcatgatggaggtaagaaatattacgcagactccgtgaggggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagattgggtagtagtaccagctgctacaatcctaagaggcggtataactggaactagcaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 390 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
492 491 M01495:47:000000000-JFBTW:1:2107:15172:9694_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARDHGRSSILDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtttattactgtgcgagagatcacggccgaagtagcatattggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
493 492 M01495:47:000000000-JFBTW:1:2107:24039:9827_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD2-21*02 F 3 8 8 9 8.8.9 [3.17.38.11] CARYRGTADYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagataccgggggactgcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
494 493 M01495:47:000000000-JFBTW:1:2107:8305:9923_1:N:0: productive Homsap IGHV3-30*01 F 1138 98.71 230/233 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-12*01 F 1 8 8 13 8.8.13 [6.17.38.11] CAKPLLVATIPFDYW in-frame + gactctcctgtgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaatgaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggccgtatattactgtgcgaaacccttactagtggctacgatcccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
495 494 M01495:47:000000000-JFBTW:1:2107:16632:11247_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69D*01 F 1014 95.89 210/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 1 8 8 16 8.8.16 [2.17.38.11] CAGLKYQLLYYYYYMDVW in-frame + gcttctggatacaccttcagcagctatgctaacagctgggtgcgacaggcacctggacaagcgcttgagtggatgggatggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatcaacgagcacagcctacatggaactgagcagcctgagatctgaggacacggcagtgtattactgtgcgggcttgaagtaccagctgctatattactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
496 495 M01495:47:000000000-JFBTW:1:2107:25183:11399_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1028 96.36 212/220 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-6*01 F 1 8 7 14 8.7.14 [3.17.38.11] CARYSSSSGGGWFDPW in-frame + tgcaacctctgggttcaccgtcagcagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaattatttatagcggtggtagcacatattacgtagactccgtgaagggccgattcaccatctccagagacaattccaagaacacactgtatcttcaaatgaacagcctgagagccgaggacacggccttttattactgtgcgaggtatagcagctcgtccggaggcggttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
497 496 M01495:47:000000000-JFBTW:1:2107:29494:11625_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F or Homsap IGHV4-34*08 F 1028 96.36 212/220 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-9*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARGQPFYGVLFAFDIW in-frame + cactgtctctggtggccccatcagtagttactactggagctggatccggcagccccctgggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccaaccattttacggtgtcttgtttgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
498 497 M01495:47:000000000-JFBTW:1:2107:17514:11646_1:N: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1145 100.00 229/229 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-13*01 F 1 8 10 12 8.10.12 [3.17.38.11] CTTERGYSINFDYW in-frame + tgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtaccacagaacgcgggtacagcattaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
499 498 M01495:47:000000000-JFBTW:1:2107:2841:12334_1:N:0 productive Homsap IGHV4-34*03 F 1050 97.72 214/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARGSSQSSSYVPFEYW in-frame + cgctgtctatggtgggtccttcagtaattactactggggctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagccaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggctcatcccaaagcagctcgtatgttccttttgaatactggggccagggaatcctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
500 499 M01495:47:000000000-JFBTW:1:2107:2508:12502_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 3 8 8 9 8.8.9 [2.17.38.11] CARFVRGTDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagattcgtccgtggaactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccatttccccctcgtctcctgtgcgaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
501 500 M01495:47:000000000-JFBTW:1:2107:9701:13141_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-13*01 F 3 8 8 17 8.8.17 [3.17.38.11] CAREGRLLKQQLSGWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtggtagtggtggtaccacacactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaaggtcggttattaaagcagcagctgtccggttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
502 501 M01495:47:000000000-JFBTW:1:2107:17687:13342_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [3.17.38.11] CAKVHRALTYYYDSSGLTPDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtgcaccgcgcactcacgtattactatgatagtagtggtctaacccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
503 502 M01495:47:000000000-JFBTW:1:2107:19366:13676_1:N: productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-13*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARAQDISSPPQGYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccactaccacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcacaggatatcagcagtcccccccaaggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
504 503 M01495:47:000000000-JFBTW:1:2107:24167:14163_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARSEWEATSAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagatccgagtgggaagctacttcggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
505 504 M01495:47:000000000-JFBTW:1:2107:6124:14339_1:N:0 unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ5*02 F 183 84.31 43/51 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARQSDYGDYLLFCPW in-frame + rearranged sequence, stop codons aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttctaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaatctgactacggtgactacttgttattttgcccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
506 505 M01495:47:000000000-JFBTW:1:2107:7751:14376_1:N:0 productive Homsap IGHV3-11*01 F, or Homsap IGHV3-48*03 F or Homsap IGHV3-48*04 F 962 92.38 206/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 3 8 8 10 8.8.10 [3.17.38.11] CAKVVGGCFDYW in-frame + tgcagcctctggattcaccgtcaataagtactggatgcactgggtccgccaagctccagggaaggggctggagtgggtttcatatattagtagtagtggtagtagtgtacactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagttgtaggtggctgctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
507 506 M01495:47:000000000-JFBTW:1:2107:3712:15177_1:N:0 productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-8*02 F 1 10 7 14 10.7.14 [3.17.38.11] CARDYRRGADDAFDIW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattacaggaggggggccgatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
508 507 M01495:47:000000000-JFBTW:1:2107:19532:15465_1:N: productive Homsap IGHV1-2*02 F 1059 98.17 215/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-15*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARGLNRSGGSCYSFWFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccttaatcgtagtggtggtagctgctactcattttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
509 508 M01495:47:000000000-JFBTW:1:2107:17323:16104_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*02 F or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD2-2*03 F 2 8 8 22 8.8.22 [3.17.38.11] CARVGYCSSTSCRSHYYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacggagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagttggatattgtagtagtaccagctgccgctcgcactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaatccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
510 509 M01495:47:000000000-JFBTW:1:2107:6464:16246_1:N:0 productive Homsap IGHV1-18*04 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-21*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDPGGGYSYNWFDPW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatccgggtggaggttattcgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
511 510 M01495:47:000000000-JFBTW:1:2107:6885:17169_1:N:0 productive Homsap IGHV4-59*02 F 1073 98.64 217/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-13*01 F 3 8 7 16 8.7.16 [3.17.38.11] CARGGRQQPTPHDAFDIW in-frame + cactgtctctggtggctccgtcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgagagcaccagcaacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggaggcaggcagcagccgacgccccatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
512 511 M01495:47:000000000-JFBTW:1:2107:25886:17579_1:N: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1145 100.00 229/229 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 3 8 10 21 8.10.21 [3.17.38.11] CTTVLPAAIRGYVGYYYYGMDVW in-frame + tgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtaccacagtattaccagctgctatcagggggtatgtaggctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
513 512 M01495:47:000000000-JFBTW:1:2107:4702:18346_1:N:0 productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD2-15*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARDDGGATARW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaacccgaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgacgggggagctactgctcgttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
514 513 M01495:47:000000000-JFBTW:1:2107:13019:18571_1:N: productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-9*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARGGPDYYDFTMDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggggccggattactatgatttcaccatggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
515 514 M01495:47:000000000-JFBTW:1:2107:16680:18584_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1019 95.91 211/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 3 8 7 17 8.7.17 [3.17.38.11] CARCVGYSYHFTTCRFDYW in-frame + cgctgtctatggtgggtccttcagtgattactactggacctggatccgccagcccccagggaagggactggagtggattggggaaatcaatcatagtggagacaccaagtgcaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggctgtgtattactgtgcgagatgtgtgggatacagctatcattttacgacgtgtagatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccaccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
516 515 M01495:47:000000000-JFBTW:1:2107:21981:18628_1:N: productive Homsap IGHV1-2*02 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARGAVAGPFNYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccacagacacatccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgcagtggctggaccgtttaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
517 516 M01495:47:000000000-JFBTW:1:2107:25686:19130_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD3-9*01 F 2 8 7 11 8.7.11 [3.17.38.11] CARVTVLTGWDHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactattggagctggatccggcagcctccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtcaccgttttgactggttgggaccactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
518 517 M01495:47:000000000-JFBTW:1:2107:3209:19234_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARRTYGDYDFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggacctacggtgactacgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
519 518 M01495:47:000000000-JFBTW:1:2107:6397:19287_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*04 F (see comment) 162 73.02 46/63 nt Homsap IGHD6-25*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARSAAAQGEMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatcggccgcggcgcagggggaaatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
520 519 M01495:47:000000000-JFBTW:1:2107:3492:19307_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD1-26*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARLEGGATTVNWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttgaagggggagctactacggtcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
521 520 M01495:47:000000000-JFBTW:1:2107:11162:19850_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F 242 96.15 50/52 nt Homsap IGHD6-13*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARLAARMAEEYFQHW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacttgccgcccgtatggcagaagaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
522 521 M01495:47:000000000-JFBTW:1:2107:26651:20102_1:N: productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARDPRVGAFDIW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatccccgggttggcgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
523 522 M01495:47:000000000-JFBTW:1:2107:22013:21023_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 669 94.00 141/150 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 2 X 8 13 X.8.13 [X.4.38.11] CARDTVGEVAGPDYW in-frame + atatcgcgagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtactactgtgcgagagacactgtcggagaagtggctggacctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 253 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
524 523 M01495:47:000000000-JFBTW:1:2107:4441:21206_1:N:0 productive Homsap IGHV4-59*12 (F) 1073 98.64 217/220 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 3 8 7 22 8.7.22 [3.17.38.11] CARGRIVVVPAAMRFYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaacttgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgtattgtagtagtaccagctgctatgagattctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
525 524 M01495:47:000000000-JFBTW:1:2107:24470:21541_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 712 95.48 148/155 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD4-11*01 ORF 2 X 8 22 X.8.22 [X.5.38.11] CARDNLLSTNDDYSNYYYYGMDVW in-frame + atatcgcgaggggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagataatctcctttcgactaacgatgactacagtaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 285 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
526 525 M01495:47:000000000-JFBTW:1:2107:10775:22015_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 770 100.00 154/154 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD3-3*01 F 3 X 8 20 X.8.20 [X.5.38.11] CARTSSPLIFGVVEGYYGMDVW in-frame + tgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaacttcgagccccctgatttttggagtggttgaggggtactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 278 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
527 526 M01495:47:000000000-JFBTW:1:2107:15437:22359_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-24*01 ORF 3 8 8 10 8.8.10 [3.17.38.11] CARLRDGYNDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactaagagatggctacaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
528 527 M01495:47:000000000-JFBTW:1:2107:20389:23009_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-6*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARSPPGSSAYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggtctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatctcccccgggcagctcggcgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
529 528 M01495:47:000000000-JFBTW:1:2107:21949:24769_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARGRSGSMDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggcgtagtgggtccatggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
530 529 M01495:47:000000000-JFBTW:1:2106:14295:1764_1:N:0 productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 995 89.75 219/244 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 2 8 8 23 8.8.23 [10.17.38.11] CSKGPKYCSSTSCYGYYYYYYMDVW in-frame + agcctcagtgacgctctcctgcaaggcttctggatacaccttccccagttatgatatcaactgggtgcgccacgccactggacaagggcttgagaggatggtctggatcaacgctaccagtggtaacacaggctatgtacagaactctcatggcagagtcaccattaccaggaacacctctctacgcacagcctacatggagctgagcaaccggagatctgagtacccggccgtgtattactgttcaaaaggccctaaatattgtagtagtaccagctgctatggttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
531 530 M01495:47:000000000-JFBTW:1:2106:5665:3940_1:N:0: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1083 98.65 219/222 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 201 88.24 45/51 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CAIRRYSNGWYDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttatacctactacagcccgtccttccaaggccacgtcaccatctcaactgacaagtccatcagcactgcctacctgcactggagcagcctgaaggcctcggacaccgccatgtattactgtgcgatacgtcggtatagcaatggctggtacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
532 531 M01495:47:000000000-JFBTW:1:2106:12151:4049_1:N:0 No rearrangement found Homsap IGHV1-8*01 F 1032 96.80 212/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggactcgacccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 311 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
533 532 M01495:47:000000000-JFBTW:1:2106:6761:4080_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-21*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKDSSVVVIADAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatagcagtgtggtggtgattgctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
534 533 M01495:47:000000000-JFBTW:1:2106:9709:4226_1:N:0: unproductive (see comment) Homsap IGHV1-69*06 F, or Homsap IGHV1-69*13 F or Homsap IGHV1-69*14 F (see comment) 932 86.89 212/244 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD4-11*01 ORF 3 8 8 19 8.8.19 [10.17.38.11] *AKEMVMTTVTTYYYYGMDVW in-frame + rearranged sequence, stop codons 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ggcctcagcgaaggtctccagtaaagcctctctcatctccttcagcagctatgttatcagctaggtacgtctgtcccttgcaatctggcttgcgtggatgggaggtatcatccctatctttggttcagcaaactacgcacagaagttgcagggcagagtcacgattaccgcggacaaatccacgagcacagactacatggagctgagcagcctgcgatctgaggacacggccgtgtattactgagcgaaagagatggttatgactacagtaactacctactactactacggtatggacgtctggggccaagggtccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
535 534 M01495:47:000000000-JFBTW:1:2106:16856:4557_1:N:0 productive Homsap IGHV3-7*03 F 845 86.55 193/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-12*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAHSGGYSGYDLDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccggggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacagtggtggatatagtggctacgatcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
536 535 M01495:47:000000000-JFBTW:1:2106:5418:4590_1:N:0: productive Homsap IGHV1-2*06 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-13*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARGRFPLPGIAAAGTLGAFDIW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggacggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcaagagggcgcttccctctcccgggtatagcagcagctggtaccttaggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
537 536 M01495:47:000000000-JFBTW:1:2106:6674:5069_1:N:0: productive Homsap IGHV3-21*04 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDNGDTALGYDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagataacggggatacagcattgggatatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
538 537 M01495:47:000000000-JFBTW:1:2106:23194:5285_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-24*01 ORF 3 8 8 12 8.8.12 [3.17.38.11] CASSTASDRRFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagttccacagctagtgatcgccgctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
539 538 M01495:47:000000000-JFBTW:1:2106:24981:5581_1:N:0 No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F or Homsap IGHV5-51*05 F 948 91.89 204/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 278 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
540 539 M01495:47:000000000-JFBTW:1:2106:10248:6083_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARQRAAEGNWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagcgagcagctgaaggtaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
541 540 M01495:47:000000000-JFBTW:1:2106:4884:6282_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-3*01 F 2 8 8 12 8.8.12 [3.17.38.11] CAKDYDFWSGFDYW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagattacgatttttggagtggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
542 541 M01495:47:000000000-JFBTW:1:2106:14108:7456_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-3*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARDSVPNYDFWSGYYDFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattcagttccgaattacgatttttggagtggttattacgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
543 542 M01495:47:000000000-JFBTW:1:2106:23217:8143_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD1-26*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARGRDWYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggagggactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
544 543 M01495:47:000000000-JFBTW:1:2106:12427:9412_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARRIAAAGNYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcacgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggatagcagcagctggcaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
545 544 M01495:47:000000000-JFBTW:1:2106:10787:9452_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1155 100.00 231/231 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [6.17.38.11] CARDRVGDSSGKNYYYGMDVW in-frame + ctctcctgtgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatagggtaggtgatagtagtggaaagaactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 352 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
546 545 M01495:47:000000000-JFBTW:1:2106:18689:9477_1:N:0 productive Homsap IGHV3-23*03 F (see comment) 1028 96.36 212/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARDVRYSRLGFDYW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (7 AA in M01495:47:000000000-JFBTW:1:2106:18689:9477_1:N:0; 8 AA in Homsap IGHV3-23*03): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctagattcacctttagcacctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagacgtaagatacagccggctggggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
547 546 M01495:47:000000000-JFBTW:1:2106:9069:9740_1:N:0: productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD3-16*02 F 3 8 8 10 8.8.10 [3.17.38.11] CARIVRSWFDPW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaggatcgttaggagctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
548 547 M01495:47:000000000-JFBTW:1:2106:23741:10536_1:N: productive Homsap IGHV4-34*09 F 1064 98.18 216/220 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-21*02 F 2 8 7 14 8.7.14 [3.17.38.11] CARAGGGDRDDAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtgggagcaccaactacaacccctccctcaagagtctagttaccatatcagtagacacgtctaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcgagagcgggggggggagaccgcgatgatgcttttgatatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
549 548 M01495:47:000000000-JFBTW:1:2106:11502:11115_1:N: productive Homsap IGHV1-2*02 F 1068 98.63 216/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD4-11*01 ORF 2 8 8 13 8.8.13 [2.17.38.11] CARADSDQARWFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggccactggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaattatgcacagcagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagccgacagtgaccaagcccgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
550 549 M01495:47:000000000-JFBTW:1:2106:6320:11332_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-13*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARARGSSSNDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcggctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgcggggtagcagcagcaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagattcccctcgcgatat 0 0 355 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
551 550 M01495:47:000000000-JFBTW:1:2106:18690:12207_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 10 8.8.10 [3.17.38.11] CALVAGTNLDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccaggtacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgttggtggctggtacgaacttagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
552 551 M01495:47:000000000-JFBTW:1:2106:1779:12315_1:N:0 productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARHHYYDSSGYYGYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatcattactatgatagtagtggttattatggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
553 552 M01495:47:000000000-JFBTW:1:2106:4634:12482_1:N:0 productive Homsap IGHV1-18*01 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 1 8 8 12 8.8.12 [2.17.38.11] CAREYVSSWELGYW in-frame + gcttctggttacacctttaacaaccatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagtgtttacgatggtaaaacaaactatggacagaacctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagttgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagagtatgtcagcagctgggaattgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
554 553 M01495:47:000000000-JFBTW:1:2106:24163:12496_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD2-15*01 F 2 8 7 24 8.7.24 [3.17.38.11] CAREYCSGGSCYLAPLRLTNYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagaatattgtagtggtggtagctgctatctcgcccccctccggctcaccaactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
555 554 M01495:47:000000000-JFBTW:1:2106:7124:13345_1:N:0 productive Homsap IGHV3-48*03 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-16*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDREEIWGLDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatcgggaggagatatgggggcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
556 555 M01495:47:000000000-JFBTW:1:2106:27225:13517_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARGVVGATVGLLDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggagtagtgggagcaacagtggggcttcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
557 556 M01495:47:000000000-JFBTW:1:2106:22474:13983_1:N: productive Homsap IGHV3-21*04 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-3*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKVRDYDFWSGLDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtacgagattacgatttttggagtggactggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
558 557 M01495:47:000000000-JFBTW:1:2106:12932:14044_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-15*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARDGRWNAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatggtcgttggaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
559 558 M01495:47:000000000-JFBTW:1:2106:7030:14449_1:N:0 productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD4-11*01 ORF 3 8 8 19 8.8.19 [2.17.38.11] CAREMVMTTVTTYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagctcagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagagatggttatgactacagtaactacctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
560 559 M01495:47:000000000-JFBTW:1:2106:19084:14766_1:N: productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-17*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARSGWYGDYLFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaagtggttggtacggtgactacctatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
561 560 M01495:47:000000000-JFBTW:1:2106:21734:15080_1:N: productive Homsap IGHV2-5*02 F 1245 100.00 249/249 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 10 7 13 10.7.13 [11.17.38.11] CAHRPGGSYLHFDYW in-frame + acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacagaccgggtgggagctacctccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
562 561 M01495:47:000000000-JFBTW:1:2106:27404:15180_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD7-27*01 F 3 8 7 15 8.7.15 [3.17.38.11] CARVNKNWGFVRSFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagtcaacaaaaactggggattcgtccgatcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
563 562 M01495:47:000000000-JFBTW:1:2106:15317:16588_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARHRYAAAGIYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacagatacgcagcagctggtatatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
564 563 M01495:47:000000000-JFBTW:1:2106:7131:16759_1:N:0 productive Homsap IGHV4-38-2*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 3 9 7 14 9.7.14 [3.17.38.11] CARVKRRGYSYGIDYW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtgaaacgtcgcggatacagctatggtattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
565 564 M01495:47:000000000-JFBTW:1:2106:25522:16857_1:N: productive Homsap IGHV1-2*04 F 996 94.98 208/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARVGTWGLYYYYYGMDVW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtcgggacctggggcctatactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
566 565 M01495:47:000000000-JFBTW:1:2106:19731:17513_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-24*01 ORF 1 8 8 11 8.8.11 [2.17.38.11] CARDGMEMAVDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgggatggagatggctgtggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
567 566 M01495:47:000000000-JFBTW:1:2106:18424:17875_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 3 8 7 13 8.7.13 [3.17.38.11] CAREGSGYSRYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaggttcgggatacagccgatattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
568 567 M01495:47:000000000-JFBTW:1:2106:12918:17976_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F (see comment) 184 77.42 48/62 nt Homsap IGHD3-10*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARDVEIRELGYMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatgtcgagattagggagttggggtacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
569 568 M01495:47:000000000-JFBTW:1:2106:16801:18082_1:N: productive Homsap IGHV2-5*02 F 1245 100.00 249/249 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-10*01 F 2 10 7 15 10.7.15 [11.17.38.11] CAHTYGSGSDPDAFDIW in-frame + acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacacctatggttcggggagtgacccggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
570 569 M01495:47:000000000-JFBTW:1:2106:4543:18110_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARVSMIVGGFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtgtctatgatagtaggaggatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
571 570 M01495:47:000000000-JFBTW:1:2106:11968:18298_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1126 99.56 226/227 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-9*01 F 3 8 8 24 8.8.24 [4.17.38.11] CAREFPFSGSILELTAGYYYYGMDVW in-frame + cctgcaaggcttctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaatttcccttcagtggctcgatactcgaactgacagcgggttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
572 571 M01495:47:000000000-JFBTW:1:2106:18576:18905_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 202 95.45 42/44 nt 8 8 6 8.8.6 [3.17.38.11] CARDFGYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagattttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
573 572 M01495:47:000000000-JFBTW:1:2106:26675:19492_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1059 98.17 215/219 nt Homsap IGHJ4*02 F, or Homsap IGHJ4*03 F (see comment) 168 83.33 40/48 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARDPPAPEHGDYVYW in-frame + other possibilities: Homsap IGHJ1*01 (highest number of consecutive identical nucleotides) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttagtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagagccgaggacacggccgtctattactgtgcgagagatcccccggcccctgagcacggtgattatgtgtactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
574 573 M01495:47:000000000-JFBTW:1:2106:6574:19864_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-22*01 F 2 8 7 12 8.7.12 [3.17.38.11] CASYDSSLLWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagctatgatagtagtctcctttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
575 574 M01495:47:000000000-JFBTW:1:2106:16430:20094_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-19*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARPTTSGWYGSYYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagacctactaccagtggctggtacggttcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
576 575 M01495:47:000000000-JFBTW:1:2106:19412:20421_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD5-24*01 ORF 3 8 8 15 8.8.15 [3.17.38.11] CARHDRRDGYGDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgaccgtagagatggctatggtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
577 576 M01495:47:000000000-JFBTW:1:2106:21779:20720_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [2.17.38.11] CATRFYVVVHRYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacccggttttatgtagtagtacaccgctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
578 577 M01495:47:000000000-JFBTW:1:2106:9104:21219_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD4-23*01 ORF 3 8 7 19 8.7.19 [3.17.38.11] CARGSTVVTPGFIDYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggctctacggtggtaactccgggttttatagactactactacatggacgtctggggcaaagggaccacagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
579 578 M01495:47:000000000-JFBTW:1:2106:22908:21243_1:N: productive (see comment) Homsap IGHV1-3*01 F, or Homsap IGHV1-3*04 (F) or Homsap IGHV1-3*05 F 753 98.08 153/156 nt 97.44 152/156 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD6-13*01 F 2 8 X 18 8.X.18 [7.3.34.11] CASSGRGIAAAGPYNWFDPW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 42 of V-REGION: 78 nucleotides (from position 55 in the user submitted sequence), (do not cause frameshift) aaggtctcctgcaaggcttctggatacaccttcactagctatgctatgcattggaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagttccgggcggggtatagcagcagctggcccgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 274 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
580 579 M01495:47:000000000-JFBTW:1:2106:18624:21384_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*01 F 3 8 7 15 8.7.15 [3.17.38.11] CARRFGVPAAKRYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaaggttcggagtaccagctgctaagcggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
581 580 M01495:47:000000000-JFBTW:1:2106:17326:21392_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [2.17.38.11] CAYHCSSTSCYHYYYYGMDVW in-frame + gcttctggtggcaccttcagcagctattctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgcattactgtgcttatcattgtagcagtaccagctgctaccactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
582 581 M01495:47:000000000-JFBTW:1:2106:23483:21510_1:N: productive Homsap IGHV1-8*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-23*01 ORF 2 8 8 17 8.8.17 [2.17.38.11] CARDQESVYGGNSGGFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcaagaaagtgtctacggtggtaactccgggggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
583 582 M01495:47:000000000-JFBTW:1:2106:8865:21757_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD7-27*01 F 3 8 8 8 8.8.8 [3.17.38.11] CVKGDWGDYW in-frame + tgcagcctctgggttcacctttagcgactatgccatgaactgggtccgccaggctccagggcaggggctggagtgggtctcacttattagtgacaatggtggtaacacatactacgcagactccgtgaagggccggttcaccatctccagagacagctccaagaacacactgtatctgcaaatgaacagcctgagagtcgaggacacggccgtatattactgtgtgaaaggggactggggtgactactggggccagggaaccctggtcaccgtctcctcaggtagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
584 583 M01495:47:000000000-JFBTW:1:2106:11593:22335_1:N: productive (see comment) Homsap IGHV3-23*03 F 1028 96.36 212/220 nt 95.91 211/220 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD2-21*01 F 1 8 7 13 8.7.13 [3.17.38.11] CAKGKRRYYYYMDVW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 63 of V-REGION: 3 nucleotides (from position 101 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagccgaggacacggccgtatattactgtgcgaaaggcaaacggaggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
585 584 M01495:47:000000000-JFBTW:1:2106:23927:22387_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ1*01 F (see comment) 134 73.08 38/52 nt Homsap IGHD6-19*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARVHRPGIAVAGAIHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagtccaccgaccgggtatagcagtggctggtgcgatacactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
586 585 M01495:47:000000000-JFBTW:1:2106:23903:23389_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1046 97.27 214/220 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-19*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARVGSGWYFWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagggtcggcagtggctggtatttttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
587 586 M01495:47:000000000-JFBTW:1:2106:21365:23675_1:N: productive Homsap IGHV4-38-2*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 3 9 7 13 9.7.13 [3.17.38.11] CAGLLYSGSYGHDYW in-frame + cgctgtctctggttactccatcagcagtggttattactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgggactcctgtatagtgggagctacggtcatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcaccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
588 587 M01495:47:000000000-JFBTW:1:2106:15365:24046_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [2.17.38.11] CAREEGPLSSGYSLGYW in-frame + gcttctggatacaccttcaccgactactatttgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaagagggccccctaagtagtggttattcccttgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
589 588 M01495:47:000000000-JFBTW:1:2106:15960:24134_1:N: productive Homsap IGHV1-18*01 F 1014 95.89 210/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-22*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARDIRRSDTPSGSKQNYGMDVW in-frame + gcttctggttacacctttaccggctatggtatcaactgggtgcgacaggcccctggacaggggcttgagtggatgggatggatcagcgcttacaatgggaacacaaattatgcacagacactccagggcagagtcaccatgaccacagacacattcacgaacacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatataagaaggagtgatacaccgtcggggtccaaacaaaactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
590 589 M01495:47:000000000-JFBTW:1:2106:18262:24147_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F (see comment) 143 75.00 39/52 nt Homsap IGHD6-13*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARGRFIAAAGTMTFW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggggcgttttatagcagcagctggtacgatgactttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttctccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
591 590 M01495:47:000000000-JFBTW:1:2106:7763:24295_1:N:0 productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 1 8 8 10 8.8.10 [2.17.38.11] CARRRGQMFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaagaagggggcagatgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
592 591 M01495:47:000000000-JFBTW:1:2106:22850:24558_1:N: productive Homsap IGHV1-18*01 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-12*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARGYSGYVHYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggtatagtggctacgtccactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
593 592 M01495:47:000000000-JFBTW:1:2104:18613:2127_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD5-12*01 F 1 8 8 22 8.8.22 [2.17.38.11] CARGVSRGLNIVAKDYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgttagtcgggggcttaatatagtggctaaggactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
594 593 M01495:47:000000000-JFBTW:1:2104:8428:2681_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-16*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKLEKVWGSYVVYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacccgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaagcttgaaaaggtttgggggagttatgtggtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
595 594 M01495:47:000000000-JFBTW:1:2104:21494:3017_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-19*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARDRGIAVAGHYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgcggtatagcagtggctggccactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
596 595 M01495:47:000000000-JFBTW:1:2104:20937:3138_1:N:0 productive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 145 78.72 37/47 nt 8 8 7 8.8.7 [2.17.38.11] CFIDSSGYS (see V-DOMAIN Functionality comment) in-frame + IMGT/JunctionAnalysis gives no results for this JUNCTION; TRP 118 not identified gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtttcatagatagtagtggttacagcggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcccccttgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
597 596 M01495:47:000000000-JFBTW:1:2104:8264:3619_1:N:0: productive Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-12*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARGGLRFLDYW in-frame + tgcagcctctggtttcaccttcagtagttatgaaatgaactgggtccgccaggctccagggacggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatcttcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaggcgggctacgatttcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccaccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
598 597 M01495:47:000000000-JFBTW:1:2104:11581:4327_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1046 97.27 214/220 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD4-17*01 F 2 8 7 13 8.7.13 [3.17.38.11] CASHPLYGDTRGVYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagagccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagtcaccctctatacggtgacaccagaggggtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
599 598 M01495:47:000000000-JFBTW:1:2104:13126:5455_1:N:0 productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARELVDLGPTTSKAHFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagagttggtagacttagggccgacaaccagcaaggcccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
600 599 M01495:47:000000000-JFBTW:1:2104:18097:5939_1:N:0 productive Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARFIQGVAATDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatttccagagacaacgccaaggactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgtgcgagatttattcagggggtagctgccactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
601 600 M01495:47:000000000-JFBTW:1:2104:18969:5952_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69D*01 F 969 93.61 205/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-3*01 F 3 8 8 22 8.8.22 [2.17.38.11] CARGSDLITIFGVVTDHHHWFDPW in-frame + gcttctggaggcaccctcatcatctatcctatcatctggatgcgacaggcccccggacaagagcttgagtggctgtcatggatcatccctatctttgatacaacaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggtccgacctgattacgatttttggagtggttaccgaccaccaccactggttcgacccctggggccagggaacactggtcaccgtctcctcagggagtgcatacgacccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
602 601 M01495:47:000000000-JFBTW:1:2104:16568:6047_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARESFLPAADFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagagttttctgccagctgctgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
603 602 M01495:47:000000000-JFBTW:1:2104:27445:6399_1:N:0 productive (see comment) Homsap IGHV4-38-2*01 F 962 92.38 206/223 nt 91.93 205/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD1-1*01 F 1 9 7 15 9.7.15 [3.17.38.11] CAREALDSGTTNRQADW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT at codon 65 of V-REGION: 'G' (1 nucleotides at position 109 to 109 in the user submitted sequence), (cause frameshift); cgctgtctctggttactccatcagcagtggtttctactggggctggatccggcagaccccagggaaggggctggagtggcttgggagtatacatcattctgggatcacGtttttacaacccgtccctcaggagtcgagtcaccatatcagttgacacgtccaagaaccagttctcccttaggctcaactctgtgaccgccgcagacacggccgtgtattactgtgcgagggaagctttggattctggaacaacaaatcgacaggcggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
604 603 M01495:47:000000000-JFBTW:1:2104:9967:7019_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-2*01 F 3 8 8 21 8.8.21 [3.17.38.11] CARQADIVVVPAVEGYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaggccgatattgtagtagtaccagctgtggaggggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
605 604 M01495:47:000000000-JFBTW:1:2104:13035:7255_1:N:0 productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt 99.55 221/222 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-21*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARFGSDTYYNWFDPW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT at codon 47 of V-REGION: 'G' (1 nucleotides at position 59 to 59 in the user submitted sequence), (cause frameshift); aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgGggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatttggatctgatacctattacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
606 605 M01495:47:000000000-JFBTW:1:2104:26310:8707_1:N:0 productive Homsap IGHV3-48*03 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKGGEEGQGIIDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatataccacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggggagaggagggtcaggggatcattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
607 606 M01495:47:000000000-JFBTW:1:2104:11942:9892_1:N:0 productive (see comment) Homsap IGHV5-51*04 F 911 96.89 187/193 nt 96.37 186/193 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-17*01 F 2 8 8 11 8.8.11 [3.17.28.11] CARSRAGDYPTNW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 87 of V-REGION: 29 nucleotides (from position 169 in the user submitted sequence), (cause frameshift) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagcggatgcactccctcggacaccgccatgtattactgtgcgagatcgagggcaggtgactacccgactaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 321 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
608 607 M01495:47:000000000-JFBTW:1:2104:10947:10477_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARGFNVVNTVDPDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaggattcaatgtcgttaatacagttgaccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
609 608 M01495:47:000000000-JFBTW:1:2104:12603:10512_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARDDSGSWGYYNGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccaggtaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgtagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgatagtgggagctggggttactacaacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
610 609 M01495:47:000000000-JFBTW:1:2104:20078:10719_1:N: productive Homsap IGHV4-39*07 F 1094 98.23 222/226 nt Homsap IGHJ6*03 F (see comment) 140 78.26 36/46 nt Homsap IGHD3-16*02 F 1 10 7 6 10.7.6 [3.17.38.11] CARSAYPW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagcagtagtcgttactactggggctggatccgccagcccccagggagggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgaggtcggcatatccctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
611 610 M01495:47:000000000-JFBTW:1:2104:23591:10815_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*01 F 178 84.00 42/50 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [2.17.38.11] CAREVGRHYYDSSGLGEDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggtggggaggcattactatgatagtagtggtttaggtgaggacgtctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
612 611 M01495:47:000000000-JFBTW:1:2104:3171:11436_1:N:0 productive Homsap IGHV4-61*05 F 1112 99.12 224/226 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 2 10 7 16 10.7.16 [3.17.38.11] CAGGFGYGSGSGGPFDYW in-frame + cactgtctctggtggctccatcagcagtagtagttactactggggctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgggaggttttggctatggttcggggagtgggggcccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
613 612 M01495:47:000000000-JFBTW:1:2104:11876:11907_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*02 F 2 8 8 21 8.8.21 [2.17.38.11] CASFGCSSTSCYTSYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagctttggttgtagtagtaccagctgctatactagctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
614 613 M01495:47:000000000-JFBTW:1:2104:26037:12001_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1028 96.36 212/220 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-9*01 F 3 8 7 9 8.7.9 [3.17.38.11] CARGQVIVGYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcacccagggaagggcctggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggacaggttatagtcggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
615 614 M01495:47:000000000-JFBTW:1:2104:22108:12549_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-24*01 ORF 1 8 8 9 8.8.9 [3.17.38.11] CRLMAGDFDYW in-frame + tgcagcctctggattcactttcagtaacgcctggatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgccggttgatggctggcgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
616 615 M01495:47:000000000-JFBTW:1:2104:23461:12553_1:N: productive Homsap IGHV3-73*01 F, or Homsap IGHV3-73*02 F 992 99.01 200/202 nt Homsap IGHJ3*01 F 169 82.00 41/50 nt Homsap IGHD2-2*02 F 3 2 10 8 2.10.8 [X.17.38.11] CAPAGKHGVW in-frame + ctcttctatacactgggtccgccaggcttccgggaaagggctggagtgggttggccgtattagaagcaaagctaacagttacgcgacagcatatgctgcgtcggtgaaaggcaggttcaccatctccagagatgattcaaagaacacggcgtatctgcaaatgaacagcctgaaaaccgaggacacggccgtgtattactgtgcgcctgctgggaaacatggggtctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 290 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
617 616 M01495:47:000000000-JFBTW:1:2104:24158:13426_1:N: productive Homsap IGHV4-59*12 (F) 1028 96.36 212/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-13*01 F 2 8 7 18 8.7.18 [3.17.38.11] CASWTYTSIAAAEANWFDPW in-frame + cactgtctctggtggctccatcaataattactactggagctgggtccggcagcccccagggaagagactggagtggattgcgtatatctattacagagggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagttggacatacacgagtatagcagcagctgaggctaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
618 617 M01495:47:000000000-JFBTW:1:2104:12937:13775_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1043 96.41 215/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-10*01 F 2 8 8 13 8.8.13 [3.17.38.11] CATASGTYLNWFDPW in-frame + tgcagcctctgggttcaccttcaatgattactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaataatgatgggagtagcacaagctacgcggactccgtgaagggccgatttaccatctccagagacaacgccaagaacacgctgtttctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaacagcttcggggacttatttaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
619 618 M01495:47:000000000-JFBTW:1:2104:27677:14814_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 3 8 8 24 8.8.24 [2.17.38.11] CARGSWFVVPAASVHGRDYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggctcttggtttgtagtaccagctgctagcgtgcatggtagagactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
620 619 M01495:47:000000000-JFBTW:1:2104:6332:15448_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD3-10*01 F 3 8 8 25 8.8.25 [2.17.38.11] CATNGLITMVRGVISPLGGDYYYMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaaatggattaattactatggttcggggagttatcagtccactaggtggagactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
621 620 M01495:47:000000000-JFBTW:1:2104:10650:15596_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*02 F 2 8 7 15 8.7.15 [3.17.38.11] CARGRVPYAGRAPFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgggtaccatacgctggtcgtgcgccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
622 621 M01495:47:000000000-JFBTW:1:2104:25311:15946_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-24*01 ORF 2 8 8 13 8.8.13 [2.17.38.11] CARDVEDLQAFKDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagacgttgaagacctacaagcgttcaaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
623 622 M01495:47:000000000-JFBTW:1:2104:21440:16853_1:N: No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcgaggggggcagtggctgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 309 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
624 623 M01495:47:000000000-JFBTW:1:2104:26686:16920_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 1 8 8 10 8.8.10 [3.17.38.11] CVRGERLDFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgtacgaggggaaaggttggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
625 624 M01495:47:000000000-JFBTW:1:2104:15768:17827_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-16*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKDRFTFGGVPDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcggtttacgtttgggggagttcccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
626 625 M01495:47:000000000-JFBTW:1:2104:8618:18364_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARSPYSSGHFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatccccctatagcagtggccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
627 626 M01495:47:000000000-JFBTW:1:2104:24242:18724_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD7-27*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARQRTGDKDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagcggactggggataaggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
628 627 M01495:47:000000000-JFBTW:1:2104:22120:18923_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-2*02 F 2 8 8 23 8.8.23 [3.17.38.11] CAKDLGYCSSTSCYTGGLGYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttaggatattgtagtagtaccagctgctatacgggggggttgggatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
629 628 M01495:47:000000000-JFBTW:1:2104:26629:19225_1:N: productive Homsap IGHV3-48*03 F 1034 95.96 214/223 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD3-10*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARVVVWAGGMDVW in-frame + tgtagcctctggattcaccttcagcaattatgaaatgaattgggtccgccaggctccagggaaggggctggaatgggtctcagttattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagttgtagtctgggccggcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
630 629 M01495:47:000000000-JFBTW:1:2104:22283:20212_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-18*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAGQDLIQLGGAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgggtcaagacctgatacagctagggggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
631 630 M01495:47:000000000-JFBTW:1:2104:10853:20513_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 3 8 8 23 8.8.23 [2.17.38.11] CARAQASVEGVVTPLRYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcccaagcctcggtcgaaggagtggttacccccttacgatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
632 631 M01495:47:000000000-JFBTW:1:2104:17051:20729_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-18*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKGKIQLWPGVYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggaagatacagctatggcctggggtgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
633 632 M01495:47:000000000-JFBTW:1:2104:6595:21122_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-13*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARVLYSSSTIIYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggtactgtatagcagcagcacgattatctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
634 633 M01495:47:000000000-JFBTW:1:2104:5739:21178_1:N:0 productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 192 86.27 44/51 nt Homsap IGHD3-16*01 F 3 8 8 11 8.8.11 [2.17.38.11] CAGAGSALAFDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctattcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgggggcaggaagtgccctagctttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
635 634 M01495:47:000000000-JFBTW:1:2104:17314:21331_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-10*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARGLYGSGSYQVGHYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggactttatggttcggggagttatcaagtcggccactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
636 635 M01495:47:000000000-JFBTW:1:2104:10121:21589_1:N: productive Homsap IGHV1-2*02 F 1145 100.00 229/229 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD6-13*01 F 2 8 8 10 8.8.10 [5.17.38.11] CARVHPAAGGYW in-frame + ctcctgcaaggcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagttcacccagcagctggcggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 323 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
637 636 M01495:47:000000000-JFBTW:1:2104:13610:21623_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 1 8 8 20 8.8.20 [2.17.38.11] CAREGTSKVLRFLEWFEPWDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagggaactagcaaagtattacgatttttggagtggttcgaaccttgggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
638 637 M01495:47:000000000-JFBTW:1:2104:11954:22761_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*02 F 2 8 8 13 8.8.13 [2.17.38.11] CARFRSYDTAYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgaggtctgaggacacggccgtgtattactgtgcgagatttcggagctacgataccgcttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
639 638 M01495:47:000000000-JFBTW:1:2105:22414:1347_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1043 96.41 215/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD7-27*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARELTDYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtcctccaggctccagggaaggggctggagtgggtctcagctattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagcttactgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
640 639 M01495:47:000000000-JFBTW:1:2105:18192:3191_1:N:0 unproductive Homsap IGHV4-61*01 F 1103 98.67 223/226 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-26*01 F 3 10 7 X 10.7.X [3.17.38.11] CARFPSVG#YW out-of-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagttaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagattccccagcgtggggcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
641 640 M01495:47:000000000-JFBTW:1:2105:12802:4074_1:N:0 productive Homsap IGHV4-61*05 F 1040 95.58 216/226 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD6-13*01 F 3 10 7 13 10.7.13 [3.17.38.11] CAIGSRQLGLRFDPW in-frame + cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattgggtatatctctgacaatgggggcaccaactacaacccctccctcaagagtcgggtcaccatttcagtagacaggtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgattggttccaggcagctcggacttaggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
642 641 M01495:47:000000000-JFBTW:1:2105:25661:4700_1:N:0 productive Homsap IGHV1-2*02 F 873 98.33 177/180 nt Homsap IGHJ6*02 F 199 83.93 47/56 nt Homsap IGHD3-3*01 F 3 X 8 10 X.8.10 [X.14.38.11] CARVLRDGMDVW in-frame + gtgcgacaggcccctggacaagggcttgagtggataggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgaggacacggctgtgtattactgtgcgagagtccttcgagacggtatggacgtctggggccaagggaccgcggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 274 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
643 642 M01495:47:000000000-JFBTW:1:2105:12302:5581_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-1*01 F 2 8 8 11 8.8.11 [3.17.38.11] CAREERYDAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaggaacgatatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
644 643 M01495:47:000000000-JFBTW:1:2105:23172:5816_1:N:0 productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARCGVVVPLYWYFDLW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagatgtggggtagtagtaccactctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
645 644 M01495:47:000000000-JFBTW:1:2105:24871:5973_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD4-17*01 F 3 8 7 11 8.7.11 [3.17.38.11] CARGALSWYFDLW in-frame + cactgtctctggtggctccatcagtagttacttctggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcgcgctgtcttggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
646 645 M01495:47:000000000-JFBTW:1:2105:7328:6559_1:N:0: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CATELHSSGWYKVDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctcccgggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgacagaacttcatagcagtggctggtacaaggtcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
647 646 M01495:47:000000000-JFBTW:1:2105:23406:7023_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-10*01 F 2 8 8 22 8.8.22 [3.17.38.11] CASTAWGSRSYIASHYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtacagcttggggttcgaggagttatatcgcatcccactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
648 647 M01495:47:000000000-JFBTW:1:2105:5736:7161_1:N:0: productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-21*02 F 3 8 8 14 8.8.14 [2.17.38.11] CARVGGVAGTVSLGYW in-frame + gcttctggatacaccttaaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttgggggggtggctggtactgtctcccttggatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
649 648 M01495:47:000000000-JFBTW:1:2105:18042:7402_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-10*01 F 2 8 7 12 8.7.12 [3.17.38.11] CVRGYASGSYWSHW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattgggaaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtatattactgtgtgagggggtatgcttcggggagttattggtctcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
650 649 M01495:47:000000000-JFBTW:1:2105:20540:9636_1:N:0 productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-12*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARVDIVATISFGYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtggatatagtggctacgatttcctttgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
651 650 M01495:47:000000000-JFBTW:1:2105:9812:10042_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 989 93.72 209/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD6-13*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARELTAAGRYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatctgttagtggtactggtggtgatacacactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaactaacagcagctggtaggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
652 651 M01495:47:000000000-JFBTW:1:2105:5359:10140_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 11 8.8.11 [3.17.38.11] CAKETRGGYVGNW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtggtagtggtggtaccacacactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaagtcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtgtattactgtgcgaaagagacccgtgggggctacgttggcaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
653 652 M01495:47:000000000-JFBTW:1:2105:15467:10330_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-8*01 F 3 8 8 10 8.8.10 [2.17.38.11] CATLTDGDFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactatgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacactgacggatggggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
654 653 M01495:47:000000000-JFBTW:1:2105:15427:10882_1:N: unproductive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKNGDSGTGTPFDY* in-frame + rearranged sequence, stop codons; TRP 118 not identified tgcagcctctggattcaccttcagtagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaatggggatagtgggactggaactccttttgactactgaggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
655 654 M01495:47:000000000-JFBTW:1:2105:25716:11057_1:N: productive Homsap IGHV3-33*03 F, or Homsap IGHV3-33*08 F 962 92.38 206/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-3*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARDSAEWSRDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcagtgtatctgcaaatgaacagcctgagagccgaggacacggctctgtattactgtgcgagagattccgcagagtggtcccgggactattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
656 655 M01495:47:000000000-JFBTW:1:2105:7306:12395_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARSSTDLWFGEYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgacatgtattactgtgcgagatcctcgaccgacttatggttcggggagtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcccccgcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
657 656 M01495:47:000000000-JFBTW:1:2105:27884:12498_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD2-15*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARGYCSGGSCSRAAEYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtatattactgtgcgagaggatattgtagtggtggtagttgctcgcgggcggctgagtactggggccagggaaccctggtcaccgtctcctcagagagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
658 657 M01495:47:000000000-JFBTW:1:2105:8405:12869_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F (see comment) 166 74.19 46/62 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDHGDGSGSYYPGDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcacggagatggttcggggagttattatccgggggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
659 658 M01495:47:000000000-JFBTW:1:2105:22778:12991_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-6*01 F 1 8 7 11 8.7.11 [3.17.38.11] CARVWSSLGFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagtctggagctcgttaggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
660 659 M01495:47:000000000-JFBTW:1:2105:29201:14353_1:N: unproductive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD3-10*01 F 2 8 8 X 8.8.X [3.17.38.11] CARPTMVRGA#YMDVW out-of-frame + other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccgactatggttcggggagcaactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 358 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
661 660 M01495:47:000000000-JFBTW:1:2105:17357:14720_1:N: productive (see comment) Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1145 100.00 229/229 nt 99.56 228/229 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD6-19*01 F 2 8 10 19 8.10.19 [3.17.38.11] CARTRGAVAGTGVPRGAFDIW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT at codon 74 of V-REGION: 'T' (1 nucleotides at position 138 to 138 in the user submitted sequence), (cause frameshift); tgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaagTgcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtgcgaggacccgcggagcagtggctggtaccggagtcccccgaggcgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgcccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
662 661 M01495:47:000000000-JFBTW:1:2105:8548:15512_1:N:0 productive Homsap IGHV4-39*07 F 1076 97.35 220/226 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt 10 7 8 10.7.8 [3.17.38.11] CARVHYFDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagtgcactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
663 662 M01495:47:000000000-JFBTW:1:2105:20544:16958_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 998 94.17 210/223 nt Homsap IGHJ6*03 F (see comment) 166 74.19 46/62 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CSRPRYSATNMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccctcagtggctactgggtgcactgggtccgcctagctccagggaaggggctggagtgggtctcacgtattagtggtgatgggactatcacaacctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacgcgctgtatctgcaaatgaacagtctgagagccgaggacacggccgtgtattattgttcaaggccaaggtatagtgcgaccaacatggacgtctggggcaaagggaccacggtcaccgtctcatcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
664 663 M01495:47:000000000-JFBTW:1:2105:2436:17061_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD2-15*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARDLDVGYCSGGSCYSAGDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatctcgacgtaggatattgtagtggtggtagctgctactcggcgggcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
665 664 M01495:47:000000000-JFBTW:1:2105:22054:17104_1:N: productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARVAVAGYFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgagagtggcagtggctggatactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
666 665 M01495:47:000000000-JFBTW:1:2105:20820:17205_1:N: productive Homsap IGHV3-11*04 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARSMAAALDYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactcagtgaggggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaagtatggcagcagctcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
667 666 M01495:47:000000000-JFBTW:1:2105:3936:17559_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARVSGGSCYDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagtgagtggtggtagctgctacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
668 667 M01495:47:000000000-JFBTW:1:2105:18887:17896_1:N: productive Homsap IGHV4-31*01 F 1121 99.56 225/226 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-15*01 F 2 10 7 15 10.7.15 [3.17.38.11] CARGCSGGSCYYAFDIW in-frame + cactgtctctggtggctccatcagcagtggtggttactactggagctggatccgccagcacccagggaagggcctggagtggattgggtacatctattacagtgggagcacctactacaacccgtccctcaagagtctggttaccatatcagtagacacgtctaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcgagaggttgtagtggtggtagctgctactatgcttttgatatctggggccaagggacaatggtcaccgtgtcttcagggtgtgcagccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
669 668 M01495:47:000000000-JFBTW:1:2105:14023:18149_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F (see comment) 186 87.50 42/48 nt Homsap IGHD5-24*01 ORF 3 8 7 13 8.7.13 [3.17.38.11] CARYGRDGYKYLDAW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattattgtgcgaggtatggtagagatggctacaaataccttgacgcctggggccagggaagcctggtctccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
670 669 M01495:47:000000000-JFBTW:1:2105:3191:18305_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD4-17*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARGARSLGDYGYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgcgagatctcttggtgactacggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
671 670 M01495:47:000000000-JFBTW:1:2105:20169:18485_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1101 99.55 221/222 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-10*01 F 2 8 8 22 8.8.22 [3.17.38.11] CASTAWGSGSYIASHYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtacagcttggggttcggggagttatatcgcatcccactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
672 671 M01495:47:000000000-JFBTW:1:2105:14878:18642_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1011 95.05 211/222 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARYCSYGLTGSDWFDPW in-frame + aagggttctggatacagctttaccagctactggatcgtctgggtgcgccagatgcccgggaaaggcctggagtggatgggcatcatcaatcctactaactctgataccagatatagcctgtcctcccaaggccaggtcaccctctccgccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatattgcagctatgggctcaccggttcggactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
673 672 M01495:47:000000000-JFBTW:1:2105:17344:19022_1:N: productive Homsap IGHV3-21*04 F 1043 96.41 215/223 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [3.17.38.11] CAREGYSSGRCGASDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccggttcaccatctccagagacaattccgagaacacgctgtatctgcaaatggacagcctgagagccgaggacacggccgtctattactgtgcgagggaggggtatagcagtggccggtgcggtgcttctgatatctggggccaaggaacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
674 673 M01495:47:000000000-JFBTW:1:2105:16838:19219_1:N: productive Homsap IGHV5-10-1*04 F 1092 99.10 220/222 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-3*01 F 2 8 8 23 8.8.23 [3.17.38.11] CARLPITNDFWSGYRDYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttccgattactaacgatttttggagtggttatcgagactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
675 674 M01495:47:000000000-JFBTW:1:2105:21270:19266_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-21*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARHGVISTIGGQDNFDAFDIW in-frame + aaggtttctggatacagctttaccagttactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcatcgcctatttgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatggggtgatttctacaatcggtggtcaagataactttgatgcatttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
676 675 M01495:47:000000000-JFBTW:1:2105:15140:20900_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD2-15*01 F 2 8 8 20 8.8.20 [2.17.38.11] CAGRYCSGGSCYKGLSNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgattccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgggaagatattgtagtggtggtagctgctacaaaggcttgtccaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
677 676 M01495:47:000000000-JFBTW:1:2105:24419:22050_1:N: unproductive (see comment) Homsap IGHV1-18*01 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-21*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARDQFRVVTGGC*LLNW in-frame + rearranged sequence, stop codons gcttctggatacaccttcactagctatgctatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgggcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcagttccgggttgtaacgggagggtgttgattgctaaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
678 677 M01495:47:000000000-JFBTW:1:2105:24155:22344_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 844 92.78 180/194 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD5-18*01 F 3 1 8 21 1.8.21 [X.17.38.11] CARGGYSYGSEPHYYYYYYMDVW in-frame + atgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtgggtacagctatggctcggagccccattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 321 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
679 678 M01495:47:000000000-JFBTW:1:2105:25246:23232_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-26*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARVNGSYHFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtaaatgggagctaccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
680 679 M01495:47:000000000-JFBTW:1:2105:10444:23628_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 1 8 8 15 8.8.15 [3.17.38.11] CAKLRFLGNYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaagacacggccgtatattactgtgcgaaattacgatttttgggaaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
681 680 M01495:47:000000000-JFBTW:1:2105:12959:23803_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*02 F 190 82.14 46/56 nt Homsap IGHD1-14*01 ORF 2 8 8 10 8.8.10 [3.17.38.11] CARLHPPEMDVW in-frame + aagggttctggatacagctttaccacctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttcaccccccggaaatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
682 681 M01495:47:000000000-JFBTW:1:2105:19734:24170_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD6-13*01 F 2 8 7 19 8.7.19 [3.17.38.11] CARTLGIAAAGTGLELWFDPW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaaccttgggtatagcagcagctggtacaggtttggagctctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
683 682 M01495:47:000000000-JFBTW:1:2103:21619:1253_1:N:0 productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1043 96.41 215/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD4-23*01 ORF 3 8 8 15 8.8.15 [3.17.38.11] CARIRMETPYYYYMDVW in-frame + tgcagcctctggattcaccttcagtaactactggatgtactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatactgatgggagtagcacaaactacgcggactccgtgaagggccgattcaccatctccagagacaacgtgaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctatatattactgtgcaagaatcaggatggaaaccccctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccgtttcccactcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
684 683 M01495:47:000000000-JFBTW:1:2103:9927:1871_1:N:0: productive Homsap IGHV4-34*03 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-6*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARESIAAASIRNFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacccggccgtgtattactgtgcgagagagagtatagcagccgcctcaatccgtaattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
685 684 M01495:47:000000000-JFBTW:1:2103:22487:2242_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 920 100.00 184/184 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-17*01 F 2 X 8 19 X.8.19 [X.15.38.11] CARHAHYGDYLWSEEGVIDYW in-frame + ctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacgcccattacggtgactacctttggagtgaggagggggtcattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 305 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
686 685 M01495:47:000000000-JFBTW:1:2103:8545:2274_1:N:0: unproductive (see comment) Homsap IGHV1-18*04 F 1005 95.43 209/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARGPFPNIVVGNKGWFDPW in-frame + rearranged sequence, stop codons gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtagatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagccttcatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggccccttccccaatattgtagtaggaaacaaggggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
687 686 M01495:47:000000000-JFBTW:1:2103:18026:2660_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD6-13*01 F 2 8 8 24 8.8.24 [2.17.38.11] CARELEDLIAAAGMNSYYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagagttggaggacctaatagcagcagctggaatgaatagttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
688 687 M01495:47:000000000-JFBTW:1:2103:12939:3440_1:N:0 productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD7-27*01 F 2 8 8 13 8.8.13 [2.17.38.11] CATLKLGIRGGDDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgacccttaaactggggattcgtgggggtgatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
689 688 M01495:47:000000000-JFBTW:1:2103:14554:3544_1:N:0 productive Homsap IGHV4-61*03 F 887 88.05 199/226 nt Homsap IGHJ5*02 F 183 84.31 43/51 nt Homsap IGHD6-6*01 F 2 10 7 13 10.7.13 [3.17.38.11] CARDQASSQTGIDQW in-frame + cactgtctctgatggctccgtcaccgataatagtttctactggagctggatccggcagcccccggggaaggggctggaatggattgggcacacgtcttacaatgtgaggaccacctacagcccctccctcaagagtcgactcaccatatcagtagacacgtccaagaacctcttctccctcaaactgacctctgtgaccgctgcggacacggccgtttattactgcgcgagagaccaggcatctagtcaaactgggattgaccagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
690 689 M01495:47:000000000-JFBTW:1:2103:12006:3587_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD4-23*01 ORF 2 8 8 16 8.8.16 [2.17.38.11] CASGAGDYWGPAYYMDVW in-frame + gcttctggatacaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtggagcgggtgactattggggacccgcctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
691 690 M01495:47:000000000-JFBTW:1:2103:16340:3815_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1046 97.27 214/220 nt Homsap IGHJ2*01 F 175 81.13 43/53 nt Homsap IGHD3-22*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARGTSYDSRLWDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggaagatctattacagtgggagcaccaactacaatccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgacctctatgaccgctgcggacacggccgtgtatttctgtgcgaggggaaccagttatgatagtaggctttgggatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
692 691 M01495:47:000000000-JFBTW:1:2103:16461:3911_1:N:0 No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F or Homsap IGHV4-59*12 (F) 821 85.91 189/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggcttaatcaataaatactattggagctgggtccggcagtccccagggaagggactggagtggattgggtatatccactacagtgggagcaccatctacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaaggtgatctctgctatcacaccgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 296 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
693 692 M01495:47:000000000-JFBTW:1:2103:19936:4034_1:N:0 productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 1 8 8 10 8.8.10 [2.17.38.11] CARWSYGGFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcaggctggggtctgacgacacggccgtgtattactgtgcgagatggtcgtatggcggctttgactactggggccagggaaccctggtcattgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
694 693 M01495:47:000000000-JFBTW:1:2103:19745:5985_1:N:0 productive Homsap IGHV1-2*02 F 978 94.06 206/219 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARGGIVPTYYYYMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggggatagtaccaacctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctggagaattcccctcgcgatat 0 0 358 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
695 694 M01495:47:000000000-JFBTW:1:2103:18339:6058_1:N:0 productive (see comment) Homsap IGHV3-48*04 F 941 99.47 189/190 nt 98.95 188/190 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD3-3*01 F 2 8 8 14 8.8.14 [3.6.38.11] CAARRFWSGYYYMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 33 nucleotides (from position 41 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcaccttcagtagctatagcatgaactggggttcatacattagtagtagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcggcccgacgcttttggagtggttattactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 327 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
696 695 M01495:47:000000000-JFBTW:1:2103:11815:6310_1:N:0 productive Homsap IGHV4-61*08 F 1040 95.58 216/226 nt Homsap IGHJ4*02 F (see comment) 195 89.58 43/48 nt Homsap IGHD5-18*01 F 3 10 7 11 10.7.11 [3.17.38.11] CARHGGGYSYDTW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagcagtggtggttactactggagctggatccgccagcacccagggaagggcctggagtggattggatatatctcttacagtgggagcaccatctacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagagccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagacatgggggtggatacagctatgacacctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
697 696 M01495:47:000000000-JFBTW:1:2103:19674:7415_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-15*01 F 2 8 8 10 8.8.10 [2.17.38.11] CAREIGGSRDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagagattggtggttcaagggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
698 697 M01495:47:000000000-JFBTW:1:2103:17046:7587_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD7-27*01 F 3 8 8 8 8.8.8 [3.17.38.11] CVKGDWGDYW in-frame + tgcagcctctgggttcacctttagcgactatgccatgaactgggtccgccaggctccagggcaggggctggagtgggtctcacttattagtgacaatggtggtaacacatactacgcagactccgtgaagggccggttcaccatctccagagacagctccaagaacacactgtatctgcaaatgaacagcctgagagtcgaggacacggccgtatattactgtgtgaaaggggactggggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
699 698 M01495:47:000000000-JFBTW:1:2103:6508:8768_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-23*01 ORF 2 8 8 14 8.8.14 [3.17.38.11] CARLSDYGGNSLFDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactatcggactacggtggtaactccctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
700 699 M01495:47:000000000-JFBTW:1:2103:8856:8951_1:N:0: productive Homsap IGHV3-48*03 F 1034 95.96 214/223 nt Homsap IGHJ6*02 F 190 82.14 46/56 nt Homsap IGHD3-16*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARGGRGGMDVW in-frame + tgcagcctctggattcacctttgatgattatggcatgagctgggtccgccaagctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagggggcaggggaggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
701 700 M01495:47:000000000-JFBTW:1:2103:14943:8957_1:N:0 productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 772 98.73 156/158 nt Homsap IGHJ6*02 F (see comment) 202 80.65 50/62 nt Homsap IGHD1-26*01 F 3 X 8 13 X.8.13 [X.6.38.11] CATGSGSSVHGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) ggcttgagtgggtgggatggatcagcgctcacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgacagggagtgggagctcggttcacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 261 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
702 701 M01495:47:000000000-JFBTW:1:2103:2564:9592_1:N:0: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [2.17.38.11] CAREGYYYDSSGQPLSAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagagggttattactatgatagtagtggtcagcccctcagcgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
703 702 M01495:47:000000000-JFBTW:1:2103:17835:10218_1:N: productive Homsap IGHV3-7*03 F 1070 100.00 214/214 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 2 8 8 13 8.8.13 [0.17.38.11] CARVHDFWSGYLDYW in-frame + tggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagtccacgatttttggagtggttaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 317 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
704 703 M01495:47:000000000-JFBTW:1:2103:25782:10972_1:N: productive Homsap IGHV4-61*01 F, or Homsap IGHV4-61*08 F 1058 96.46 218/226 nt Homsap IGHJ6*03 F (see comment) 175 75.81 47/62 nt Homsap IGHD6-13*01 F 3 10 7 16 10.7.16 [3.17.38.11] CARGRLEAEQQLNHLDVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cactgtctccggtggctccgtcagcagtggtccttactactggacctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagggcggttggaggcggagcagcagctgaaccacctggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
705 704 M01495:47:000000000-JFBTW:1:2103:26652:11450_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD1-26*01 F 2 8 8 21 8.8.21 [3.17.38.11] CANMGRWDRNSGFYYYYYGMDVW in-frame + tgcagcctctagattcagctttagcagctatgccatgagctgggtccgccagactccagggaaggggctggaatgggtctcaggtattagtgctggtggtggtagcacattctacgcagactccgtgaagggccggctcaccatctccagagacaattccgagaacacgctgtatctgcaaatgaacagcctgagagtcgaggacacggccgtatattactgtgcgaatatgggaaggtgggatcgaaattcgggattttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
706 705 M01495:47:000000000-JFBTW:1:2103:22170:12061_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARDFLDSSGWFDW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccaggggcacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagattttctcgatagcagtggctggttcgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
707 706 M01495:47:000000000-JFBTW:1:2103:27085:12175_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARLWTTAAVASFGYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggaactgaggagcctgagatctgacgacacggccgtgtattactgtgcgagactatggacaaccgctgcggtagcctcctttgggtactggggccagggaaccctagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
708 707 M01495:47:000000000-JFBTW:1:2103:16175:12396_1:N: productive Homsap IGHV3-7*01 F 1007 94.62 211/223 nt Homsap IGHJ1*01 F 215 90.38 47/52 nt Homsap IGHD4-23*01 ORF 2 8 8 14 8.8.14 [3.17.38.11] CARQVDGANSHYFQRW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctacagagacaacgccaagaactcactgagtctgcaagcgaacagcctgagagtcgaggacacggctgtctatcactgtgcgagacaggtagacggtgccaactctcattacttccagcgctggggccagggcaccctggtcagcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
709 708 M01495:47:000000000-JFBTW:1:2103:8521:12574_1:N:0 productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1095 100.00 219/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD3-3*01 F 1 8 8 14 8.8.14 [2.17.38.11] CAAGGVLYQAYYMDVW in-frame + gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggcaggtggggtcttataccaagcgtactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
710 709 M01495:47:000000000-JFBTW:1:2103:21575:13061_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*04 (F) or Homsap IGHV1-3*05 F 960 93.15 204/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 2 8 8 24 8.8.24 [2.17.38.11] CARGAGYDFWSGYFVNHVYYYGMDVW in-frame + gcttctggatacaccttcactaattttgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcagccctggcaatggtaacacaaaatattcacagaggttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcggcctgagatctgaggacacggccgtgtattactgtgcgagaggcgcggggtacgatttttggagtggttatttcgttaaccacgtttactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
711 710 M01495:47:000000000-JFBTW:1:2103:20074:13355_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-21*02 F 1 8 8 11 8.8.11 [2.17.38.11] CARGGLLFPVDYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagaggtgggctactattccccgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
712 711 M01495:47:000000000-JFBTW:1:2103:17379:13957_1:N: productive (see comment) Homsap IGHV1-3*01 F, or Homsap IGHV1-3*04 (F) or Homsap IGHV1-3*05 F 687 98.58 139/141 nt 97.87 138/141 nt Homsap IGHJ6*03 F (see comment) 184 77.42 48/62 nt Homsap IGHD5-24*01 ORF 1 8 X 14 8.X.14 [2.3.34.11] CATNPEVATWVYMDVW in-frame + potentially, because of detected insertion/deletion other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) in FR2-IMGT, from codon 42 of V-REGION: 78 nucleotides (from position 40 in the user submitted sequence), (do not cause frameshift) gcttctggatacaccttcactagctatgctatgcattggaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacgaaccccgaggtagctacgtgggtctacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 278 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
713 712 M01495:47:000000000-JFBTW:1:2103:14864:14497_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD2-21*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARPEDGVVGAILSSGGACDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccgggtcaccatctcagccgacaagtccatcagcacctcctacctgccgtggagcagcctgaaggcctcggacactgcgatgtattactgtgcgagaccggaggatggggtagtgggagctattctaagctccgggggtgcttgtgatatctggggccaagggacaatggtcaccgtctcgtcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
714 713 M01495:47:000000000-JFBTW:1:2103:9577:14707_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-21*02 F 2 8 7 13 8.7.13 [3.17.38.11] CARDRNHGGDYSDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatcggaatcatggcggtgactactctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
715 714 M01495:47:000000000-JFBTW:1:2103:5156:14778_1:N:0 No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1037 96.82 213/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 279 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
716 715 M01495:47:000000000-JFBTW:1:2103:5843:14987_1:N:0 productive Homsap IGHV3-48*03 F 1060 100.00 212/212 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-12*01 F 3 7 8 14 7.8.14 [X.17.38.11] CARVRGGYSGYDFYYW in-frame + gattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagttcgaggaggatatagtggctacgatttctactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 318 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
717 716 M01495:47:000000000-JFBTW:1:2103:24747:15171_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 953 91.93 205/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-3*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARDTIFGVAIDYW in-frame + tgcagcctctggactcaccctcaacagcaatgtcatgagttgggtccgccaggctccagggaaggggctggagtgggtctcaactattggtggtagtgatggtagcacacactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagggatacgatttttggagtggccattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
718 717 M01495:47:000000000-JFBTW:1:2103:6786:15774_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD1-14*01 ORF 2 8 8 12 8.8.12 [2.17.38.11] CARVSRANYGMDVW in-frame + gcatctggatacaccttcaccagctactatgtgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattattgtgcgagagtatcccgggcgaactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
719 718 M01495:47:000000000-JFBTW:1:2103:21464:16394_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 978 94.06 206/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD5-12*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARGPGVATTVYYYYGMDVW in-frame + gcttctggatacaacttcatcgactactatatacagtgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaccgggagtggctacgacggtctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
720 719 M01495:47:000000000-JFBTW:1:2103:5603:16638_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-1*01 F 1 8 8 9 8.8.9 [3.17.38.11] CARLTNGAEYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggattatctatcctggtgactctaataccagatacaggccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttacaaatggggctgagtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
721 720 M01495:47:000000000-JFBTW:1:2103:11012:16942_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-6*01 F 1 8 7 14 8.7.14 [3.17.38.11] CARRGVYSSSSLVDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggcggggcgtctatagcagctcgtccttagttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
722 721 M01495:47:000000000-JFBTW:1:2103:24142:17787_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD1-7*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARGTKGAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggggaactaagggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
723 722 M01495:47:000000000-JFBTW:1:2103:12360:17914_1:N: productive Homsap IGHV3-30*03 F, or Homsap IGHV3-30*18 F or Homsap IGHV3-30-5*01 F or Homsap IGHV3-33*05 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-3*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARSRDIGFLEWWVFGYW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagtaataaatactatgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagaagtagggacataggatttttggagtggtgggtctttgggtactgggaccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
724 723 M01495:47:000000000-JFBTW:1:2103:17017:18946_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-15*01 F 2 8 8 26 8.8.26 [3.17.38.11] CARAKGVGLYCSGGSCYPGLYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagcaaagggggtgggtttatattgtagtggtggtagctgctacccgggactctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 396 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
725 724 M01495:47:000000000-JFBTW:1:2103:18606:19902_1:N: productive Homsap IGHV3-11*03 F, or Homsap IGHV3-11*05 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcttccattagtggtagtagtatttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
726 725 M01495:47:000000000-JFBTW:1:2103:17355:20188_1:N: No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgaagcagctcgcccacccctcgcgatat 0 0 257 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
727 726 M01495:47:000000000-JFBTW:1:2103:25272:20419_1:N: productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-19*01 F 3 8 8 12 8.8.12 [2.17.38.11] CAKLEQWLVRVGYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtatattactgtgcgaagctcgagcagtggctggtacgggttgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
728 727 M01495:47:000000000-JFBTW:1:2103:10335:20480_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-1*01 F 1 8 8 11 8.8.11 [3.17.38.11] CASGVTSDAFDIW in-frame + aagggttctggatacagctttacgaaccactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccagggccaggtcaccatctcagccgacaactccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgtctggggtgacgtccgatgcttttgatatctggggcctagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
729 728 M01495:47:000000000-JFBTW:1:2103:16671:21405_1:N: productive Homsap IGHV1-69-2*01 F 906 90.41 198/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARSEWEATSAFDIW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaagatccgagtgggaagctacttcggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
730 729 M01495:47:000000000-JFBTW:1:2103:12202:21484_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*02 F 3 8 7 17 8.7.17 [3.17.38.11] CARAAGGGSAAIPRRFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcggccggtgggggttcagctgctataccccgccggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
731 730 M01495:47:000000000-JFBTW:1:2103:23042:21964_1:N: unproductive Homsap IGHV3-48*03 F, or Homsap IGHV3-48*04 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD1-26*01 F 1 8 8 X 8.8.X [3.17.38.11] CARDDSGSWSR#YGMDVW out-of-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaagtcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgatagtgggagctggtctcgcttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
732 731 M01495:47:000000000-JFBTW:1:2103:17791:22189_1:N: productive Homsap IGHV3-66*01 F, or Homsap IGHV3-66*02 F or Homsap IGHV3-66*04 F 1046 97.27 214/220 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-3*01 F 2 8 7 24 8.7.24 [3.17.38.11] CARDVYDFWSGYYLLPPYYYYGMDVW in-frame + tgcagcctctggattcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgtatacgatttttggagtggttattacctccttcccccctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
733 732 M01495:47:000000000-JFBTW:1:2103:15943:22739_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 1 8 8 12 8.8.12 [3.17.38.11] CASLRFLEWSTDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagatctgacgacacggccgtgtattactgtgcgagtctacgatttttggagtggtctactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
734 733 M01495:47:000000000-JFBTW:1:2103:16263:22789_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD4-23*01 ORF 3 8 8 13 8.8.13 [2.17.38.11] CARSPALGYYYMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggagccctgcgctgggttactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
735 734 M01495:47:000000000-JFBTW:1:2103:10811:23097_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1005 95.43 209/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-26*01 F 1 8 8 15 8.8.15 [2.17.38.11] CATYRSSIGRDDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggctcctggaaaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacataccgttcgtcaatagggcgagatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
736 735 M01495:47:000000000-JFBTW:1:2103:7359:23370_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 9 8.8.9 [3.17.38.11] CAIAVAEIDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgatagcagtggccgagattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
737 736 M01495:47:000000000-JFBTW:1:2103:14100:23741_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 998 94.17 210/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*02 F 1 8 8 10 8.8.10 [3.17.38.11] CARWRGSHFDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagatggcgtgggagtcactttgactattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
738 737 M01495:47:000000000-JFBTW:1:2103:7298:24367_1:N:0 unproductive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 1 8 8 X 8.8.X [3.17.38.11] CARDRIQLWLR#FDYW out-of-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagataggatacagctatggttaagatttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
739 738 M01495:47:000000000-JFBTW:1:2103:15642:24797_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1056 97.30 216/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARLDYYASSGYFDYW in-frame + aagggttctggatacagctttaccagccattggatcggctgggttcgccagatgcccgggaaaggcctggagtggatgggtatcatctatcctggcgactctgataccagatacagcccgtccttccaaggccaggtcaccatcccagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcgattactatgctagtagtggttatttcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
740 739 M01495:47:000000000-JFBTW:1:2102:20965:2884_1:N:0 productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD5-18*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARLAKEHDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactagctaaggagcatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
741 740 M01495:47:000000000-JFBTW:1:2102:21127:3115_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 181 87.23 41/47 nt Homsap IGHD5-24*01 ORF 3 8 8 7 8.8.7 [3.17.38.11] CAREEGDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaagaaggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
742 741 M01495:47:000000000-JFBTW:1:2102:12744:3289_1:N:0 productive Homsap IGHV3-7*03 F 1088 98.65 220/223 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-10*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARVVRGVIVSYYYYYMDVW in-frame + tgcagcctctggattcacctttagtgactattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaattcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagtggttcggggagttattgtttcctactactactactacatggacgtctggggcagagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
743 742 M01495:47:000000000-JFBTW:1:2102:21932:4352_1:N:0 unproductive (see comment) Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 27 8.8.27 [2.17.38.11] CASCEGGHCSSTMFRRTPISE*YYYMDVW in-frame + rearranged sequence, stop codons gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagttaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagttgtgaggggggtcattgtagtagtaccatgtttcgacggactccaatttccgaatagtactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 395 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
744 743 M01495:47:000000000-JFBTW:1:2102:14606:4405_1:N:0 productive Homsap IGHV3-48*02 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDLFASRQRFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggaagtaccagatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtatctgcaaatgaacagcctgagagacgaggacacggctgtgtattactgtgcgagagatttgttcgcatcccgccagcggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
745 744 M01495:47:000000000-JFBTW:1:2102:6892:4558_1:N:0: unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*07 F (see comment) 825 81.71 201/246 nt 81.30 200/246 nt Homsap IGHJ6*03 F 241 89.83 53/59 nt Homsap IGHD3-10*01 F 1 8 8 11 8.8.11 [11.16.38.11] CARLWDYYYMDVW in-frame + rearranged sequence, stop codons low V-REGION identity (81.71%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release in FR2-IMGT, from codon 53 of V-REGION: 1 nucleotides (from position 102 in the user submitted sequence), (cause frameshift) ctgggagcctctgaacattttccgtatgggttttggatccagctttactagctatcgtatttgttgctttctctagttgctctggaaagccctgtagctgacgggatcatctactctggttactctgatcccagataccacctgttcttccaagtccagatctccatctcagccgccaagttcatcagcaccgcctacctgcagtggatcagcctgcaggcttcggacaccgccatgtattactgtgcgagactatgggactactactacatggacgtctggggcaaagggaccacggtcaccgtcgcctcagggagtgcatccgccccaacccttttccccc 0 0 343 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
746 745 M01495:47:000000000-JFBTW:1:2102:14407:4957_1:N:0 productive Homsap IGHV3-7*03 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD6-13*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARGSTWNYYGMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgacgacacggccgtgtattactgtgcgagaggcagcacttggaactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
747 746 M01495:47:000000000-JFBTW:1:2102:4652:5404_1:N:0: productive (see comment) Homsap IGHV4-61*01 F, or Homsap IGHV4-61*08 F 1079 98.21 219/223 nt 97.76 218/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-10*01 F 1 9 7 18 9.7.18 [3.17.38.11] CARGQFGELFGYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 36 of V-REGION: 3 nucleotides (from position 32 in the user submitted sequence), (do not cause frameshift) cactgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggacagttcggggagttattcggttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
748 747 M01495:47:000000000-JFBTW:1:2102:20410:6114_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD3-3*01 F 3 8 8 9 8.8.9 [3.17.38.11] CARGGDWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtgctagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctttttactactgtgcgagaggaggggactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
749 748 M01495:47:000000000-JFBTW:1:2102:9579:6641_1:N:0: productive Homsap IGHV3-48*04 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-23*01 ORF 3 8 8 15 8.8.15 [3.17.38.11] CARASGMTTVVTNFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagcctcgggcatgactacggtggtaaccaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
750 749 M01495:47:000000000-JFBTW:1:2102:27205:6784_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-14*01 ORF 3 8 8 10 8.8.10 [3.17.38.11] CAKDRALPHDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagaccgtgcgctcccgcacgactactggggccagggaaccctggtcaccgtatcctcagggagtgcatccgccccaaacctttaccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
751 750 M01495:47:000000000-JFBTW:1:2102:26383:6929_1:N:0 productive Homsap IGHV3-11*06 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD5-12*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARGGPERYYYYMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagggggccccgagcggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
752 751 M01495:47:000000000-JFBTW:1:2102:3168:7008_1:N:0: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD5-12*01 F 1 8 7 12 8.7.12 [3.17.38.11] CAKERVDIVAADYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagaaagagtggatatagtggcggccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
753 752 M01495:47:000000000-JFBTW:1:2102:12870:7019_1:N:0 productive Homsap IGHV4-30-2*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 10 7 10 10.7.10 [3.17.38.11] CARGSGYSFDYW in-frame + cgctgtctctggtggctccatcagcagtggtggttactcctggagctggatccggcagccaccagggaagggcctggagtggattgggtacatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacaggtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgccagaggtagtggttattctttcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
754 753 M01495:47:000000000-JFBTW:1:2102:19584:7081_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD3-16*01 F 1 8 8 18 8.8.18 [2.17.38.11] CASRPSQPRSSLGYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcgtacgaatccacgagcacagcctacatggagctgagcagcctgagacctgaggacacggccgtgtattactgtgcgagtcgaccaagtcaacctcgctcgtctttggggtactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
755 754 M01495:47:000000000-JFBTW:1:2102:15241:7753_1:N:0 productive Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD2-2*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAAGSTSYYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggaatgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcggcgggtagtaccagttattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
756 755 M01495:47:000000000-JFBTW:1:2102:20267:7843_1:N:0 productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 790 100.00 158/158 nt Homsap IGHJ4*02 F (see comment) 195 89.58 43/48 nt Homsap IGHD2-21*01 F 2 X 8 15 X.8.15 [X.6.38.11] CARAGPICGGDCYVDPW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) ggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagctgggcccatttgtggtggtgattgctatgttgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 267 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
757 756 M01495:47:000000000-JFBTW:1:2102:9895:7912_1:N:0: productive Homsap IGHV2-70*04 F, or Homsap IGHV2-70D*04 F 1200 97.99 244/249 nt Homsap IGHJ3*01 F (see comment) 169 82.00 41/50 nt Homsap IGHD6-19*01 F 2 10 7 15 10.7.15 [11.17.38.11] CARTNIAVAGLVGMDVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) acacagaccctcacactgacctgcaccttctctgggttctcactcagcactagtggaatgcgtgtgagctggatccgtcagcccccagggaaggccctggagtggcttgcacgcattgattgggatgatgataaattctactgcacatctctgaagaccaagctcaccatctcgaaggacacctccaaaaaccaggtggtccttagaatgatcaacatggaccctgtggacacagccacgtattactgtgcacggacgaatatagcagtggctggactagttggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
758 757 M01495:47:000000000-JFBTW:1:2102:23510:8547_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARTFRGGSYQGFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgcgtattactgtgcgagaacttttcgaggtgggagctaccaaggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
759 758 M01495:47:000000000-JFBTW:1:2102:15281:8596_1:N:0 productive Homsap IGHV4-31*01 F 1121 99.56 225/226 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-2*01 F 1 10 7 19 10.7.19 [3.17.38.11] CARGYSQLLDTLATAYWFDPW in-frame + cactgtctctggtggctccatcagcagtggtggttactactggagctggatccgccagcacccagggaagggcctggagtggattgggtacatctattacagtgggagcacctactacaacccgtccctcaagagtctagttaccatctcagtagacacgtctaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcgagaggttactcccagctgctcgatacattagcaacggcatactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
760 759 M01495:47:000000000-JFBTW:1:2102:27386:9022_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 8 18 8.8.18 [3.17.38.11] CVRGGGYCSGGSCLHPYDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtgtattactgtgtaagaggcgggggatattgtagtggtggtagctgcctacacccatatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
761 760 M01495:47:000000000-JFBTW:1:2102:25624:9172_1:N:0 productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1095 100.00 219/219 nt Homsap IGHJ1*01 F, or Homsap IGHJ4*02 F (see comment) 166 86.36 38/44 nt Homsap IGHD5-18*01 F 2 8 8 6 8.8.6 [2.17.38.11] CAADLRYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggcagatctacggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 332 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
762 761 M01495:47:000000000-JFBTW:1:2102:5411:9249_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAREGYCSGGTCYSNFDYW in-frame + aagggttctggatacagctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctagtgactctgaaaccagatacagcccgtccttccaaggccaggtctacatctcagtcgacaagtccatcagcaccgcctacctgcagtggagcagcctgagggcctcggacaccgccatgtattactgtgcgagggaaggctattgtagtggtggtacctgctactctaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
763 762 M01495:47:000000000-JFBTW:1:2102:11227:9350_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ6*02 F (see comment) 180 81.48 44/54 nt Homsap IGHD1-26*01 F 1 8 8 8 8.8.8 [2.17.38.11] CAVGGAMDIW in-frame + other possibilities: Homsap IGHJ3*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggccactggacaagggcttgagtggatgggaggggtcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacgtggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggtcggaggggctatggacatctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
764 763 M01495:47:000000000-JFBTW:1:2102:25264:9586_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARAHDSSGSRYFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaggaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagcccacgatagtagtggttcgagatactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
765 764 M01495:47:000000000-JFBTW:1:2102:8263:9751_1:N:0: productive Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-10*01 F 1 8 8 11 8.8.11 [3.17.38.11] CATTSRGKYFDFW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagagctcactatatttgcaaatgaatagcctgagagtcgaggacacggccgtctattactgtgcgaccacttcccgcgggaagtactttgacttctggggccagggaagcctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
766 765 M01495:47:000000000-JFBTW:1:2102:18772:9987_1:N:0 productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1025 95.52 213/223 nt Homsap IGHJ6*02 F 215 90.38 47/52 nt Homsap IGHD4-17*01 F 2 8 8 9 8.8.9 [3.17.38.11] CAREHYGLGVW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcgcgtattagtactgatgggaggagcacaaactacgcggactccgtgaagggccgattcaccatctccagagacaacaccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacgactctatattactgtgcaagagagcactacggtctgggagtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
767 766 M01495:47:000000000-JFBTW:1:2102:9989:10943_1:N:0 productive Homsap IGHV3-30*07 F 1007 94.62 211/223 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKGQIGTYVVFDIW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccggttcagcatctccagagacaattccaggaacacagtgtttttgcaaatgaatagcctgagagccgaggacacggccatttatcactgtgcgaaaggccagattgggacctacgtcgtgtttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
768 767 M01495:47:000000000-JFBTW:1:2102:7952:11247_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1011 95.05 211/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARFGGSYFNYW in-frame + aaggcttctggatacagttttaccaactactggatcggctgggtgcgccagatgcccgggagaggcctggagtgggtggggatcatctatcctggtgactctgaaactagatacagtccgcccttcgaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggaccagcctgaaggcctcggacaccgccatgtattactgtgcgagattcggcgggagctactttaactactggggccagggaacgctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
769 768 M01495:47:000000000-JFBTW:1:2102:10972:11468_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [2.17.38.11] CAKDSRRSSGWYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtatattactgtgcgaaagattcgcgtagaagtagtggctggtattattttgactattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
770 769 M01495:47:000000000-JFBTW:1:2102:10071:11798_1:N: productive Homsap IGHV3-30-3*01 F 890 88.79 198/223 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-21*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARVHKNCGGDCYSGFDPW in-frame + tgcagcctctggacccacctttaccacctataccatggcttgggtccgccacgctccaggccagggcccggagcgggtggcagttatatcatctgatggaagcaataactactacgccgattccgtgcagggccgctgcaccatctccagagacaattccaagaccacgctgtatctgcaactgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagtgcacaagaattgtggtggtgattgctattctgggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
771 770 M01495:47:000000000-JFBTW:1:2102:5018:12253_1:N:0 productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-13*01 F 2 10 7 14 10.7.14 [3.17.38.11] CAREIGAAGTLYFDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagagataggggcagctggtactctctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
772 771 M01495:47:000000000-JFBTW:1:2102:26304:13303_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 2 8 8 13 8.8.13 [3.17.38.11] CAREGYGGKRLIDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcagggggctggagtgggtggcaattatatggttcgatggaagttacaaatactatggagactccgtgaagggccgattcaccatctccagagacaattacaagaatacgctgtatcttcaaatgaacagcctgggagccgaggacacggctgtatattactgtgcgagagagggctacggtggtaaaaggctaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
773 772 M01495:47:000000000-JFBTW:1:2102:19509:13340_1:N: productive Homsap IGHV3-7*01 F 998 94.17 210/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARDSTHYSSGWDVDYW in-frame + tgcagcccctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccacggtggaagtgacaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaacttactgtatctgcaaatgaacagcctgagagccgaggacacggctgtatattactgtgcgagagattccacccattatagtagtggctgggatgtggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
774 773 M01495:47:000000000-JFBTW:1:2102:18747:13994_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD7-27*01 F 1 8 8 7 8.8.7 [2.17.38.11] CARTKTGDW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggacaaagacgggggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
775 774 M01495:47:000000000-JFBTW:1:2102:23244:14228_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1037 96.82 213/220 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 210 90.20 46/51 nt Homsap IGHD1-1*01 F 3 8 7 9 8.7.9 [3.17.38.11] CARGKKWLDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggaagaaatggctcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
776 775 M01495:47:000000000-JFBTW:1:2102:12086:14282_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-10*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARDLLGYGTRYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatcttcttggctatgggacgaggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
777 776 M01495:47:000000000-JFBTW:1:2102:10084:14380_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARENRGYRIPYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtgattactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagggagaataggggctataggattccgtactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
778 777 M01495:47:000000000-JFBTW:1:2102:17277:14929_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-18*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARPSLRGYSYGYFDYW in-frame + gcttctggaggcaccttcggcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgaggccctctttacgtggatacagctatggttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
779 778 M01495:47:000000000-JFBTW:1:2102:9299:15162_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 969 93.61 205/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-2*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDSVYCSSTSCYFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccacagacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtatattactgtgcgagagatagcgtatattgtagtagtaccagctgctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
780 779 M01495:47:000000000-JFBTW:1:2102:19202:15495_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ1*01 F (see comment) 161 78.85 41/52 nt Homsap IGHD6-6*01 F 2 8 8 12 8.8.12 [3.17.38.11] CATSASIAALPNLW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgacatcggcgagtatagcagcactccctaacctctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
781 780 M01495:47:000000000-JFBTW:1:2102:5113:15921_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-12*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARYRVATSLDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcgccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagatacagagtggctacgagccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
782 781 M01495:47:000000000-JFBTW:1:2102:9854:16546_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD3-10*02 F 2 8 8 14 8.8.14 [3.17.38.11] CARDRDILGRYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcaagagatcgggatattctgggaagatacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
783 782 M01495:47:000000000-JFBTW:1:2102:15415:17751_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD4-23*01 ORF 3 8 8 14 8.8.14 [3.17.38.11] CARSLVTYYYYYMDVW in-frame + aagggttctggatacatctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagtccgtccttccaaggccaggtcaccatctcagccgacaagtccatcaacaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatctattactgtgcgagatcgttggttacctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
784 783 M01495:47:000000000-JFBTW:1:2102:5340:18495_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 211 88.68 47/53 nt Homsap IGHD6-13*01 F 3 8 7 20 8.7.20 [3.17.38.11] CARGRGKQLVKGVATGRYFDLW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgcgggaagcagctggtaaagggcgtagcgaccggacggtacttcgatctctggggccgtggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
785 784 M01495:47:000000000-JFBTW:1:2102:10846:19515_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARQGIVGAAWRLPPIDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagacagggaatagtgggagctgcttggaggctaccccctattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
786 785 M01495:47:000000000-JFBTW:1:2102:23630:19955_1:N: productive Homsap IGHV3-7*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-6*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDHISSSSGEGYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagaccatattagcagctcgtccggggagggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
787 786 M01495:47:000000000-JFBTW:1:2102:17054:20116_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD3-10*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARRVLLWFGDGDYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaagggtattactatggttcggggatggtgactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
788 787 M01495:47:000000000-JFBTW:1:2102:27128:20177_1:N: productive Homsap IGHV3-64D*06 F 1220 100.00 244/244 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [10.17.38.11] CVRSIAAAGGPYYFDYW in-frame + ggggtccctgagactctcctgttcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaagggactggaatatgtttcagctattagtagtaatgggggtagcacatactacgcagactccgtgaagggcagattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgagcagtctgagagctgaggacacggctgtgtattactgtgtgagatctatagcagcagctggcggaccttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
789 788 M01495:47:000000000-JFBTW:1:2102:20437:20499_1:N: productive Homsap IGHV1-3*04 (F) (see comment) 493 83.57 117/140 nt Homsap IGHJ6*02 F 242 96.15 50/52 nt X 8 8 X.8.8 [X.0.38.11] CARDYGMDVW in-frame + low V-REGION identity (83.57%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gcttctggatacaccttcaccggctactatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 259 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
790 789 M01495:47:000000000-JFBTW:1:2102:14940:20734_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 956 92.73 204/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-24*01 ORF 3 8 7 15 8.7.15 [3.17.38.11] CARVKRRDGYNLGLDYW in-frame + tgcagcctctgcgctcagcgtcagtggcagctacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagtgatagtagaatatcctatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacggtgtatcttcacatgaacagtctgagagccgaggacacggccgtgtattattgtgcgagagtaaaacgtagagatggctacaatctgggacttgactactgggggcagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
791 790 M01495:47:000000000-JFBTW:1:2102:17509:21701_1:N: productive Homsap IGHV3-30*07 F 1007 94.62 211/223 nt Homsap IGHJ6*02 F 258 94.74 54/57 nt 8 8 10 8.8.10 [3.17.38.11] CARTYYYGMDVW in-frame + tgcagcctctagattcatctttagcagctatgccatgagctgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgcattactgtgcaagaacgtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
792 791 M01495:47:000000000-JFBTW:1:2102:7456:22456_1:N:0 productive Homsap IGHV4-34*03 F 1059 98.17 215/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARGLPVAMTGFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgaactctgtgaccgctgcggacacggccgtatattactgtgcgagaggcctcccagttgctatgactggattcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
793 792 M01495:47:000000000-JFBTW:1:2102:14923:22506_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD6-19*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARAIAVAGTWSYYYMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaaccccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagcgatagcagtggctggtacttggtcctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
794 793 M01495:47:000000000-JFBTW:1:2102:15474:22653_1:N: productive Homsap IGHV4-61*08 F 1067 96.90 219/226 nt Homsap IGHJ5*02 F 192 86.27 44/51 nt Homsap IGHD4-17*01 F 3 10 7 18 10.7.18 [3.17.38.11] CARVLLTLSWMTTVTKIDPW in-frame + cactgtctctggtggctccgtcagcagtggtggtaactactggagctggatccggcagccccccgggaagggactggagtggattggatatatctatcacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatctcagtagacacgtccaagaaccagttctccctgaccctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtccttctgaccctctcctggatgactacggtgactaagatcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
795 794 M01495:47:000000000-JFBTW:1:2102:24699:23571_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 760 100.00 152/152 nt Homsap IGHJ6*04 F (see comment) 180 76.19 48/63 nt Homsap IGHD6-13*01 F 3 X 8 15 X.8.15 [X.4.38.11] CARVGLEQQLVGRMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) agtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttgggctagagcagcagctggtgggccgcatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 261 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
796 795 M01495:47:000000000-JFBTW:1:2117:14699:1165_1:N:0 productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F (see comment) 170 80.77 42/52 nt Homsap IGHD5-18*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARDLSAGYGSSMYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatctatcagccggctatggatcctcaatgtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
797 796 M01495:47:000000000-JFBTW:1:2117:11415:1760_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 7 17 8.7.17 [3.17.38.11] CARENREDGWYYYMDFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaaacagggaggatggatggtactactacatggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
798 797 M01495:47:000000000-JFBTW:1:2117:19477:2752_1:N:0 productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-19*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARAGWSYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagccggctggtcctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
799 798 M01495:47:000000000-JFBTW:1:2117:19222:3302_1:N:0 productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARSVTRDWYFDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagatcggtgactagagactggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
800 799 M01495:47:000000000-JFBTW:1:2117:17723:3734_1:N:0 productive Homsap IGHV4-59*12 (F) 1082 99.09 218/220 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-3*01 F 2 8 7 19 8.7.19 [3.17.38.11] CASTNFWSGYFNYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctgggtccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagtaccaatttttggagtggttatttcaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
801 800 M01495:47:000000000-JFBTW:1:2117:16754:4677_1:N:0 productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD3-3*01 F 2 10 7 15 10.7.15 [3.17.38.11] CARADFWSGYYYGMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagccgatttttggagtggttattactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
802 801 M01495:47:000000000-JFBTW:1:2117:21329:4695_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 969 93.61 205/219 nt Homsap IGHJ6*03 F 202 86.79 46/53 nt Homsap IGHD1-1*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARVKGYMDVW in-frame + gcttctggttacacctttaccagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaacctcgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtgaaaggatacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
803 802 M01495:47:000000000-JFBTW:1:2117:21126:5056_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [2.17.38.11] CAKDLAAATYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagctccagggcagagtcaccatgaccagggacacgtccacgaccacagtctacatggagctgagcagcctgagatctgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
804 803 M01495:47:000000000-JFBTW:1:2117:11928:5274_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARALGYCSSTSCYNWFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagccctgggatattgtagtagtaccagctgctacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
805 804 M01495:47:000000000-JFBTW:1:2117:19773:6264_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 998 94.17 210/223 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 3 8 8 21 8.8.21 [3.17.38.11] CAKDDIVVVPAAIAYYYYGMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccaggtaaggggctggagtgggtctcagctattagtgggagtggtgttagcacatactatacagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatgatattgtagtagtaccagctgctattgcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
806 805 M01495:47:000000000-JFBTW:1:2117:20591:6306_1:N:0 productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1092 99.10 220/222 nt Homsap IGHJ1*01 F (see comment) 152 76.92 40/52 nt Homsap IGHD5-18*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARHSDASTPLW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) aagggttctggatacagctttaccagctactggatcaactgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatttattactgtgcgagacacagcgatgcatcgacacctctttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
807 806 M01495:47:000000000-JFBTW:1:2117:20273:6309_1:N:0 productive Homsap IGHV5-10-1*04 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARGVSRDVNYFDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggagtatcccgcgacgtcaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
808 807 M01495:47:000000000-JFBTW:1:2117:22188:6440_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-1*01 F 3 8 8 11 8.8.11 [3.17.38.11] CAKVWPDPQHDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtctggcccgatccccaacatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
809 808 M01495:47:000000000-JFBTW:1:2117:20421:6625_1:N:0 productive Homsap IGHV3-33*08 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-10*01 F 1 8 8 23 8.8.23 [3.17.38.11] CASWIELLWFGESTLLKNYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagttggattgagttactatggttcggggagtccaccctccttaaaaactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
810 809 M01495:47:000000000-JFBTW:1:2117:23212:7142_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-26*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARYAEWELLSYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcctgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatacgcagagtgggagctactaagctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
811 810 M01495:47:000000000-JFBTW:1:2117:15907:7468_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 183 84.31 43/51 nt Homsap IGHD6-19*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARHLSPEQWLVTW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatctgtcccccgaacagtggctggttacctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
812 811 M01495:47:000000000-JFBTW:1:2117:5473:7477_1:N:0: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 870 100.00 174/174 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-23*01 ORF 2 X 8 15 X.8.15 [X.12.38.11] CATDGYGGNSRYYFDYW in-frame + caggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacggacggttacggtggtaactcccgttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 283 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
813 812 M01495:47:000000000-JFBTW:1:2117:20498:8429_1:N:0 productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARDNPAGDYYYYGVDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctatttattactgtgcgagagataatcccgcgggggactactactactacggtgtggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
814 813 M01495:47:000000000-JFBTW:1:2117:25216:9379_1:N:0 productive Homsap IGHV3-7*01 F 1043 96.41 215/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*01 F 1 8 8 17 8.8.17 [3.17.38.11] CARVAQLLPHHPIDAFDIW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagttgcccagctgctaccgcatcaccccattgatgcttttgatatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
815 814 M01495:47:000000000-JFBTW:1:2117:3969:9675_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-21*02 F 2 8 8 14 8.8.14 [2.17.38.11] CATGMGAGDYETFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgccacgggtatgggtgcaggtgactacgagacctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
816 815 M01495:47:000000000-JFBTW:1:2117:20016:10021_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-21*02 F 3 8 7 10 8.7.10 [3.17.38.11] CASVPTNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagcgtgccgactaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
817 816 M01495:47:000000000-JFBTW:1:2117:12144:10066_1:N: No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcacgtttagcacctacgccatgagctgggtccgccaggctccagggaaggggctggaatgggtctcagcttttagtggcagtggtagtaccacatcctacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggacgtatattactgtgcgaaaggctcctgtgagaattcccctcgcgatat 0 0 258 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
818 817 M01495:47:000000000-JFBTW:1:2117:20624:10554_1:N: productive Homsap IGHV1-8*01 F 1059 98.17 215/219 nt Homsap IGHJ6*02 F 215 90.38 47/52 nt Homsap IGHD2-21*01 F 3 8 8 9 8.8.9 [2.17.38.11] CARGVNGTDVW in-frame + gcttctggatacacgttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggacggatgaaccctaacagtggtaatacaggctatgcacagaagttccagggcagagtcaccatgaccagggacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgtgaacggtacggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
819 818 M01495:47:000000000-JFBTW:1:2117:11150:10721_1:N: productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARGQRDSSARDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgtgtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccaacgggatagtagtgcccgggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
820 819 M01495:47:000000000-JFBTW:1:2117:19321:11070_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD5-18*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARARDTAMVRAGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagcccgggatacagctatggttagggcgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
821 820 M01495:47:000000000-JFBTW:1:2117:11046:11305_1:N: productive Homsap IGHV1-8*02 F 1066 99.53 214/215 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD5-12*01 F 1 8 8 11 8.8.11 [0.17.38.11] CARGRMDNWFDPW in-frame + ctggatacaccttcaccagctatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagttctgaggacacggccgtgtattactgtgcgaggggcaggatggataactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 312 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
822 821 M01495:47:000000000-JFBTW:1:2117:7549:12363_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 222 95.83 46/48 nt 8 8 7 8.8.7 [3.17.38.11] CAKQGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaacaaggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
823 822 M01495:47:000000000-JFBTW:1:2117:9456:12395_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1001 95.00 209/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-23*01 ORF 2 8 7 13 8.7.13 [3.17.38.11] CARSYGGNAREVEYW in-frame + cactgtctctggtggctccattaatagtttgtactggagctggatccggcagcccccagggaagggactggagtggattgggtatatccactccagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatgtcagtagacacgtccaagaaccagttctctctgaagttgagttctgtgaccgctgcggacacggccgtgtattactgtgctcggagctacggtggtaacgcccgagaggttgaatactggggccagggaaccctggtcaccgtctccccagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
824 823 M01495:47:000000000-JFBTW:1:2117:22436:13207_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-6*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARLGYSSSSRGAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcgggtatagcagctcgtcccgtggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
825 824 M01495:47:000000000-JFBTW:1:2117:8056:13358_1:N:0 productive Homsap IGHV1-18*01 F 1005 100.00 201/201 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD3-10*01 F 2 4 8 25 4.8.25 [X.17.38.11] CARGPYYYGSGSPIPGFYYYYYGMDVW in-frame + accagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagggccgtattactatggttcggggagtccgattcccggtttttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 340 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
826 825 M01495:47:000000000-JFBTW:1:2117:4912:13644_1:N:0 productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1092 99.10 220/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARPALGAPGGHAFDIW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacccgccctgggagcccctggtgggcatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
827 826 M01495:47:000000000-JFBTW:1:2117:17873:13810_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-16*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARPWGSTDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccttgggggagcactgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
828 827 M01495:47:000000000-JFBTW:1:2117:25698:14076_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAREVEYSGSYFDYW in-frame + tacagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaggttgagtatagtgggagctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccccctcgcgatat 0 0 358 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
829 828 M01495:47:000000000-JFBTW:1:2117:14730:14996_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 3 8 8 30 8.8.30 [2.17.38.11] CASAPQTDNQDIVVVPAAPNSDYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcgccccccaaaccgacaatcaggatattgtagtagtaccagctgcccccaattctgactactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 404 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
830 829 M01495:47:000000000-JFBTW:1:2117:20165:15151_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-26*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARHSTQWVLRSNFDSW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatcccagccgacaagtccatcgacaccgcctacctgcagtggagcagcctgcaggcctcggacaccgccatgtattactgtgcgagacattctacccagtgggtgctacggtcgaattttgactcttggggccagggaaccgtggtcaccgtcgcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
831 830 M01495:47:000000000-JFBTW:1:2117:25491:15624_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD4-17*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARRGAVTTDYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacgccgccatgtattactgtgcgagacgcggcgcggtgactacggactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
832 831 M01495:47:000000000-JFBTW:1:2117:4521:15630_1:N:0 unproductive (see comment) Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1046 97.27 214/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARGEQWLVPYFDYW in-frame + rearranged sequence, stop codons tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttctttatagcggtgatgtcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcagatgaacagcctgagagccgaggacacggccgtctattactgtgcgagaggggagcagtggctggtaccctactttgactactggggccagtgaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
833 832 M01495:47:000000000-JFBTW:1:2117:6156:15987_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1037 96.82 213/220 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*02 F 2 8 7 23 8.7.23 [3.17.38.11] CARDCSSTSCYTEIDGYYYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattgtagtagtaccagctgctatacagaaatcgatggttactactactacggtatggatgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
834 833 M01495:47:000000000-JFBTW:1:2117:16118:16171_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-12*01 F 1 8 8 16 8.8.16 [3.17.38.11] CAKGGVLIVATIPLFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggggggttcttatagtggctacgattccactatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
835 834 M01495:47:000000000-JFBTW:1:2117:7424:16415_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARGYCSSTSCYSLGAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggatattgtagtagtaccagctgctacagtctgggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
836 835 M01495:47:000000000-JFBTW:1:2117:10042:18083_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-3*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARPYTNVWLLWDW in-frame + tgcagcgtctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattcccagaacacggtgtatctgcaaatgaataacctgggagccgaggacacggctgtgtattactgtgcgagaccctacaccaatgtgtggttattatgggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
837 836 M01495:47:000000000-JFBTW:1:2117:25019:18573_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*02 F 2 8 8 20 8.8.20 [3.17.38.11] CARRTRYCSSTSCYIGAAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgcacccgatattgtagtagtaccagctgctatatcggtgctgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctggagaattcccctcgcgatat 0 0 376 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
838 837 M01495:47:000000000-JFBTW:1:2117:12020:19824_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD5-18*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARGAGIQLFVLG in-frame + TRP 118 not identified tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaggggctgggatacagctttttgtgttagggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
839 838 M01495:47:000000000-JFBTW:1:2117:24359:20130_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 193 93.18 41/44 nt 8 8 5 8.8.5 [2.17.38.11] CASLDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtctggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
840 839 M01495:47:000000000-JFBTW:1:2117:23472:20945_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 3 8 8 16 8.8.16 [3.17.38.11] CASMVRGAHYPEYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtatggttcggggagctcattaccctgagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
841 840 M01495:47:000000000-JFBTW:1:2117:25058:21112_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARRDPAWSIDYW in-frame + aagggttctggatacagcttttccacctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacatcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgtctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggaccccgcttggagcattgattactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
842 841 M01495:47:000000000-JFBTW:1:2117:5336:21377_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 971 92.83 207/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGSVGDSGSWTEW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtgctagttacacaaactacgcagactctgtgaagggccgattcaccgtctccagagacaacgccaagaactcactttttctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggggatccgtcggggacagtgggagctggacagaatggggccagggaacccaggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
843 842 M01495:47:000000000-JFBTW:1:2117:16695:21503_1:N: productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 1 8 8 15 8.8.15 [3.17.38.11] CAKGPVDTAMVPSFDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagggcccgtggatacagctatggttcccagctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
844 843 M01495:47:000000000-JFBTW:1:2117:15977:21773_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-9*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARAHLLGVMTGSDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcccacctcctgggagtgatgactggttcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
845 844 M01495:47:000000000-JFBTW:1:2117:19497:22588_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1059 98.17 215/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARILWFGESSPDYW in-frame + gcttctggatacaccttcactaattttgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaaggcacggctgtgtattactgtgcgagaattctatggttcggggagtcatcccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
846 845 M01495:47:000000000-JFBTW:1:2117:9459:23165_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F or Homsap IGHV4-34*04 F 911 90.45 199/220 nt Homsap IGHJ1*01 F (see comment) 170 80.77 42/52 nt Homsap IGHD3-22*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARDDTSSGRPQKYLQYW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctacggtgggtccttcagtggatactactggaactggatccgccagtccccagggaaggggctgcagtggattggagaaatcgaccatagtggaggcaccaactacaacccgtccctcgagagtcgagcctccatttcggtggacacgtccaagaatcagttctccctgaggctggactctgtgaccgccgcggacacggctctttattactgtgcgagggacgatactagcagtggccgtccccaaaagtacctccaatactggagccagggcaccctggtcaccgtctccgcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
847 846 M01495:47:000000000-JFBTW:1:2117:10052:23457_1:N: productive Homsap IGHV1-18*01 F 1050 97.72 214/219 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD5-24*01 ORF 2 8 8 18 8.8.18 [2.17.38.11] CARELGQRWLQSEGWYFDLW in-frame + gcttctggttacacctttaccagctatggtatcagctggatgcgacagggccctggacaagggcttgagtggatgggatggatcagcgcttacaatgataacacaaactatgcacagaagtttcagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagagttagggcagagatggctacaatcggagggctggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
848 847 M01495:47:000000000-JFBTW:1:2116:17538:1764_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-8*01 F 3 8 7 16 8.7.16 [3.17.38.11] CARAGVHAPTHPNAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagccggggtgcacgcccccactcacccaaatgcttttgatatctggggccaaggaacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
849 848 M01495:47:000000000-JFBTW:1:2116:13868:1823_1:N:0 productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F or Homsap IGHV3-15*05 F 920 89.08 204/229 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD3-10*01 F 3 8 10 10 8.10.10 [3.17.38.11] CVRELIGAFHIW in-frame + tgcagcctctggattcgctctcagtgacgcctgggtgaactgggtccgccaggccccagggaaggggctggaatgggttggccttatgaaaggcaaaaatcatggtgggacaacagactccgctgaacccgtgagaggcagattcaccatctctgcagatgactcaaaaaatacgctgtatctgcaaatgaacacactgaaaaccgaggacacagccatttactactgtgtccgggaattaatcggcgcttttcatatctggggccaggggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
850 849 M01495:47:000000000-JFBTW:1:2116:18282:1878_1:N:0 productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKDSGSYRKSFDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatagtgggagctaccgcaagtcatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
851 850 M01495:47:000000000-JFBTW:1:2116:24647:2871_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARPDCSGGSCYPYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatatcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacctgattgtagtggtggtagctgctacccgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
852 851 M01495:47:000000000-JFBTW:1:2116:22244:3320_1:N:0 productive Homsap IGHV3-48*03 F 1034 95.96 214/223 nt Homsap IGHJ1*01 F (see comment) 170 80.77 42/52 nt Homsap IGHD2-21*02 F 2 8 8 20 8.8.20 [3.17.38.11] CASLEVDTAMDAYCGGDCTTNW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttaggctgtttgtgatgaattgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagtctcgaggtggatacagctatggatgcatattgtggtggtgactgcaccactaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
853 852 M01495:47:000000000-JFBTW:1:2116:10457:3996_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-10*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAREHLWFGELGAGYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagggaacacttatggttcggggagttaggggcgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
854 853 M01495:47:000000000-JFBTW:1:2116:10355:4039_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD1-7*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARERGLELRSSRGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagagggggctggaactacgtagttccagagggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
855 854 M01495:47:000000000-JFBTW:1:2116:18186:4183_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARLSDSSGYYYLSFVYW in-frame + aagggttctggatacagctttactagctactggatcggctgggtgcgccatatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactaagtgatagtagtggttattactacctttcttttgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgagagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
856 855 M01495:47:000000000-JFBTW:1:2116:21509:4297_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ2*01 F 220 90.57 48/53 nt Homsap IGHD1-14*01 ORF 1 8 8 13 8.8.13 [3.17.38.11] CARHAPISGAYFDLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgccccgatatccggagcgtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
857 856 M01495:47:000000000-JFBTW:1:2116:9829:4433_1:N:0: productive Homsap IGHV1-2*02 F 1014 95.89 210/219 nt Homsap IGHJ1*01 F (see comment) 161 78.85 41/52 nt Homsap IGHD4-23*01 ORF 2 8 8 11 8.8.11 [2.17.38.11] CARDRYGGDTPTW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctcacagtggtggcacagactatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgttacggtggtgacacgccgacctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
858 857 M01495:47:000000000-JFBTW:1:2116:6137:4866_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARTNYYDSSGYDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaacaaattactatgatagtagtggttatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
859 858 M01495:47:000000000-JFBTW:1:2116:6266:5194_1:N:0: productive Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-2*02 F 2 8 8 19 8.8.19 [3.17.38.11] CAKEGRYCSSTSCYNGWFDPW in-frame + tgcagcctctggattcaccttcagtcgttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagaggggcgttattgtagtagtaccagctgctataacggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
860 859 M01495:47:000000000-JFBTW:1:2116:16608:6118_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD6-19*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARPQWLGQRAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaccccagtggctgggccagagggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
861 860 M01495:47:000000000-JFBTW:1:2116:11056:6145_1:N:0 productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARVNLGGWYEWVDFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagttaatttgggtggctggtacgagtgggtcgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
862 861 M01495:47:000000000-JFBTW:1:2116:27650:6371_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARRTLLKWELGNLFFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggacattgttaaagtgggagctaggtaacctcttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
863 862 M01495:47:000000000-JFBTW:1:2116:8439:7019_1:N:0: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F 233 94.23 49/52 nt Homsap IGHD3-10*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARVAYNSGASYFQHW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtagcttacaatagtggagcgtcatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
864 863 M01495:47:000000000-JFBTW:1:2116:16519:7097_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARDSGSFLYYYYYMDVW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatagtgggagcttcctctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
865 864 M01495:47:000000000-JFBTW:1:2116:21563:7108_1:N:0 productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1068 98.63 216/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARVGWGATMDYYYGMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtgggttggggggctacgatggactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
866 865 M01495:47:000000000-JFBTW:1:2116:5341:7165_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-20*01 F 1 8 8 14 8.8.14 [2.17.38.11] CAREGLTGTTMYFDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcgcagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagggcttaactggaacgacgatgtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
867 866 M01495:47:000000000-JFBTW:1:2116:18767:7859_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARGLGVVVVAADFDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtttgggcgtagtggtggtagctgcagactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
868 867 M01495:47:000000000-JFBTW:1:2116:4615:8210_1:N:0: productive (see comment) Homsap IGHV3-43D*04 F 765 100.00 153/153 nt 99.35 152/153 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD1-26*01 F 3 8 8 15 8.8.15 [3.17.14.11] CAKDISRTYYYYATDVW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 69 of V-REGION: 70 nucleotides (from position 119 in the user submitted sequence), (cause frameshift) tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtctctcttattagttgggatggtggtagcacatactatgcagtctgagagctgaggacaccgccttgtattactgtgcaaaagatattagcaggacctactactactacgctacggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 293 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
869 868 M01495:47:000000000-JFBTW:1:2116:22159:8507_1:N:0 productive Homsap IGHV1-18*01 F 951 92.69 203/219 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD3-16*01 F 3 8 8 12 8.8.12 [2.17.38.11] CVRGTVGYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgtgagaggtacggttggctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
870 869 M01495:47:000000000-JFBTW:1:2116:6758:9403_1:N:0: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARDIPDLSSLWFGELRLDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatatacccgatttatcgtctctatggttcggggagttaaggcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
871 870 M01495:47:000000000-JFBTW:1:2116:5473:9725_1:N:0: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 760 100.00 152/152 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD6-13*01 F 2 X 8 16 X.8.16 [X.4.38.11] CARDRVPRGIAPYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) agtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaccgagtaccccggggtatagctccctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 264 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
872 871 M01495:47:000000000-JFBTW:1:2116:4104:10571_1:N:0 productive Homsap IGHV3-30*01 F 926 90.58 202/223 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [3.17.38.11] CAREGYSSGRAGVFDIW in-frame + tgcagcctctggattcaccttcagtaactatccaatgcactgggtccgccaggctccaggcaaggggctagagtggttggcagttatatcaagtgatggaagtggtcaatcgtacgcagagtccgtgaagggccgattcaccttctccagagacaactccaagaacacgcaatatctgcaaatggacagcctgagacttgaggacacggctttgtattattgtgcgagagaagggtacagcagtggccgggcgggtgtctttgatatctggggcccagggacattggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
873 872 M01495:47:000000000-JFBTW:1:2116:2835:10888_1:N:0 productive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 980 93.27 208/223 nt 92.83 207/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-16*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARDLPYVWGSLSYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT at codon 58 of V-REGION: 'CCT' (3 nucleotides at position 92 to 94 in the user submitted sequence), (do not cause frameshift); tgcagcctctgggttcaccttcagtggctctgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttattactCCTagtaatggtggtagcacatactacgccgactccgtgaagggccggttcaccatctccagagacaaatccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatctaccttacgtttgggggagtttatcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
874 873 M01495:47:000000000-JFBTW:1:2116:9504:11342_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 2 8 7 11 8.7.11 [3.17.38.11] CANRIGRVGVDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaatcggattggcagggtgggggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
875 874 M01495:47:000000000-JFBTW:1:2116:8846:11434_1:N:0 productive Homsap IGHV3-48*03 F 1034 95.96 214/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CVASLSGWYNDGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgagctgggtccgccaggctccggggaaggggctggagtgggtttcatacattaggagtgatggtggtaccacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtctatcactgtgttgctagtctcagtggctggtacaacgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
876 875 M01495:47:000000000-JFBTW:1:2116:9776:11655_1:N:0 productive (see comment) Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1090 100.00 218/218 nt 99.54 217/218 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [2.16.38.11] CARRGDYGDLRGFDYW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 43 of V-REGION: 1 nucleotides (from position 44 in the user submitted sequence), (cause frameshift) gcttctggaggcaccttcagcagctatgctatcagctgggtgcacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacggggtgactacggtgacctgaggggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 355 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
877 876 M01495:47:000000000-JFBTW:1:2116:4389:12789_1:N:0 productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1043 96.41 215/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-19*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARDLSSGWFYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctactggatgtactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaacagtgatgggagtagcacaagctacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatctgagcagtggctggttttattactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
878 877 M01495:47:000000000-JFBTW:1:2116:25731:13343_1:N: unproductive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD4-23*01 ORF 2 8 8 X 8.8.X [3.17.38.11] CASQSTVVTPGVI#FDIW out-of-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagccagtctacggtggtaactccgggagtgatacttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
879 878 M01495:47:000000000-JFBTW:1:2116:6385:14017_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 3 8 7 12 8.7.12 [3.17.38.11] CARDDGGSYQIDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggctgtgtattactgtgcgagagatgacggtgggagctaccaaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
880 879 M01495:47:000000000-JFBTW:1:2116:26869:14380_1:N: productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F (see comment) 256 90.32 56/62 nt Homsap IGHD6-19*01 F 1 8 8 19 8.8.19 [2.17.38.11] CATDSSGWLGPNNYFYGMDVW in-frame + other possibilities: Homsap IGHJ6*01 and Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagatagcagtggctggcttggccctaacaactacttctacggtatggatgtctggggccaaggaaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
881 880 M01495:47:000000000-JFBTW:1:2116:14603:15178_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-8*01 F 1 8 8 12 8.8.12 [3.17.38.11] CASGGGYESGFDYW in-frame + aagggttctggatacagctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatccatcctggtgactctgataccagatacagcctgtccttccaaggccaggtcaccatttcagccgacaagtccatcagcatcgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtggggggggctacgaatcgggttttgactactggggcctgggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
882 881 M01495:47:000000000-JFBTW:1:2116:13441:15986_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD6-6*01 F 1 8 8 19 8.8.19 [2.17.38.11] CAREAGVGIEYSSSSIWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggcgggggtcggcatcgagtatagcagctcgtcgatctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
883 882 M01495:47:000000000-JFBTW:1:2116:27177:16174_1:N: unproductive (see comment) Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F 215 90.38 47/52 nt Homsap IGHD1-26*01 F 1 8 8 X 8.8.X [2.17.38.11] CARGGSY*WAL#YFQHW out-of-frame + rearranged sequence, stop codons gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggtgggagctactaatgggcattggtacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
884 883 M01495:47:000000000-JFBTW:1:2116:15127:16528_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-2*02 F 1 8 8 15 8.8.15 [2.17.38.11] CARAQLLYEGGSAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcccagctgctatacgaaggtgggagtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
885 884 M01495:47:000000000-JFBTW:1:2116:27640:16537_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAKDSLEYCSSTSCYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagattcactagaatattgtagtagtaccagctgctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
886 885 M01495:47:000000000-JFBTW:1:2116:19037:16981_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 1 8 8 15 8.8.15 [3.17.38.11] CAKRIVGATRAPSDDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaacgtatagtgggagctacccgcgcaccctccgatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
887 886 M01495:47:000000000-JFBTW:1:2116:25086:17536_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 1 8 8 15 8.8.15 [3.17.38.11] CAKSFGMGHYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatccttcgggatggggcactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
888 887 M01495:47:000000000-JFBTW:1:2116:11409:17709_1:N: unproductive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 3 8 7 X 8.7.X [3.17.38.11] CAVYYYGSGSHPPRVG#DYW out-of-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcggtgtattactatggttcggggagccatccacctcgagtgggaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
889 888 M01495:47:000000000-JFBTW:1:2116:20969:18296_1:N: productive Homsap IGHV1-24*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [2.17.38.11] CATGLVGATTGVDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgattggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaggcctggtgggagctactaccggggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
890 889 M01495:47:000000000-JFBTW:1:2116:22966:19390_1:N: productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 998 94.17 210/223 nt Homsap IGHJ6*04 F 203 85.45 47/55 nt Homsap IGHD6-6*01 F 1 9 7 9 9.7.9 [3.17.38.11] CARKSTGMDVW in-frame + ctctgtctctggtgactccatcagcaatagtcactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcattctgggagcaccaactacagcccgtccctcaagagtcgagtcaccatatcagtagacaagtcgaagaaccagttctccgtgaggctgaactctgtgaccgctgcggacacggccgtatattactgtgcgagaaagagcacggggatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
891 890 M01495:47:000000000-JFBTW:1:2116:8979:19733_1:N:0 productive Homsap IGHV3-33*03 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-19*01 F 1 8 8 13 8.8.13 [3.17.38.11] CVREYSSGWFYFDYW in-frame + cacagcgtctggattcaccttcagtcgctatgccatgcactgggtccgccaggctccaggcaaggggctggaatcggtggcagttatatggtatgatggaagtaacaaatactatgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgtgagagagtatagcagtggctggttctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
892 891 M01495:47:000000000-JFBTW:1:2116:25028:20483_1:N: No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaaagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 294 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
893 892 M01495:47:000000000-JFBTW:1:2116:17248:23275_1:N: productive Homsap IGHV3-30*07 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [3.17.38.11] CANYGKYGSGGYRAVAHW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccgagaacacggtgtatctgcaaatgaacagcctgagagtcgaggacacggcccattattactgtgcgaattacggcaaatatggttcggggggttatcgggcagtagcccactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
894 893 M01495:47:000000000-JFBTW:1:2101:17953:3648_1:N:0 unproductive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-2*01 F 3 8 7 X 8.7.X [3.17.38.11] CARRGAFSCYLG#WFDPW out-of-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacggggagctttcagctgctatttggggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 361 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
895 894 M01495:47:000000000-JFBTW:1:2101:13280:3657_1:N:0 productive Homsap IGHV4-61*02 F (see comment) 1073 98.64 217/220 nt Homsap IGHJ6*02 F (see comment) 175 75.81 47/62 nt Homsap IGHD6-19*01 F 3 8 7 16 8.7.16 [3.17.38.11] CARLPRGLIGPSGGMDVW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR1-IMGT amino acid lengths (8 AA in M01495:47:000000000-JFBTW:1:2101:13280:3657_1:N:0; 10 AA in Homsap IGHV4-61*02): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccgccgggaagggactggagtggattgggcgtatctataccagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgaactctgtgaccgccgcagacccggccgtgtattactgtgcgagactcccccgcgggctgataggtccctcggggggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
896 895 M01495:47:000000000-JFBTW:1:2101:10718:4016_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKTTVGSAALGAYDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtgctagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtttctgcaaatgaacagcctgagagccgaggacacggccatatattactgtgcgaaaactacggtagggtcagcggcattgggtgcttatgatatctggggccaagggtcaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
897 896 M01495:47:000000000-JFBTW:1:2101:13008:4064_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD4-11*01 ORF 2 8 8 17 8.8.17 [3.17.38.11] CARLSGGVDYSNFYAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccgtgtattactgtgcgagattgtctgggggggttgattacagtaacttctatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
898 897 M01495:47:000000000-JFBTW:1:2101:12517:4439_1:N:0 unproductive (see comment) Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD6-19*01 F 3 8 8 X 8.8.X [2.17.38.11] CASKRSGW*AERDSGGL#YYYGMDVW out-of-frame + rearranged sequence, stop codons gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtaagaggagtggctggtaggcggaacgggatagtggtgggctccatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 385 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
899 898 M01495:47:000000000-JFBTW:1:2101:7336:4536_1:N:0: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-15*01 F 3 10 7 18 10.7.18 [3.17.38.11] CARDQLPADDIDYYYGMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaccagctaccggccgatgatattgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
900 899 M01495:47:000000000-JFBTW:1:2101:11215:4795_1:N:0 productive Homsap IGHV1-18*01 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARDGYYYDSSGYYWVDW in-frame + aaggcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagacgggtattactatgatagtagtggttattactgggtggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
901 900 M01495:47:000000000-JFBTW:1:2101:20055:5478_1:N:0 productive Homsap IGHV3-7*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 174 90.48 38/42 nt Homsap IGHD7-27*01 F 3 8 8 5 8.8.5 [3.17.38.11] CATGGYW in-frame + tgcagcctctggattcacctttagcaactatctgatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaagtgagaaaaactatgtggactctgcgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgacagggggctattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccgtgagaattcccctcgcgatat 0 0 332 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
902 901 M01495:47:000000000-JFBTW:1:2101:21576:5859_1:N:0 productive Homsap IGHV4-59*12 (F) 1046 97.27 214/220 nt Homsap IGHJ6*02 F 266 98.18 54/55 nt 8 7 10 8.7.10 [3.17.38.11] CARDYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagagattactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
903 902 M01495:47:000000000-JFBTW:1:2101:24040:7081_1:N:0 productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD5-18*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARVAKPFSSGPYYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggtcgcgaagcctttcagctcaggtccttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
904 903 M01495:47:000000000-JFBTW:1:2101:18526:7984_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-3*01 F 3 8 8 21 8.8.21 [2.17.38.11] CARDLWPEGVVIMDYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttgcagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatctatggcccgagggagtggttattatggactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
905 904 M01495:47:000000000-JFBTW:1:2101:9890:8269_1:N:0: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 1 8 8 17 8.8.17 [2.17.38.11] CASPLSDRFGELLSEWSYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagcccactatccgatcggttcggggagttattatcagaatggtcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
906 905 M01495:47:000000000-JFBTW:1:2101:22817:8273_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-18*01 F 3 8 8 14 8.8.14 [2.17.38.11] CASRRYSYGYNYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtaggagatacagctatggttataactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
907 906 M01495:47:000000000-JFBTW:1:2101:7537:8451_1:N:0: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDIPTGWFTDYW in-frame + tgcagcctctggattccccttcagtaacttctggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatcctgatgggagtggcacatcctacgcggactccgtgaagggccgattcaccatctccagggacaacgccaagaacacgctgtatctgcaaatgaacggtctgagagccgaggacacggctctgtattactgtgcaagagatatccccactggctggtttactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
908 907 M01495:47:000000000-JFBTW:1:2101:7094:8563_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARGENSTSLSFYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggggaaaatagtaccagccttagcttttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcaggaagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
909 908 M01495:47:000000000-JFBTW:1:2101:25727:8564_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1082 99.09 218/220 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 183 84.31 43/51 nt Homsap IGHD3-22*01 F 3 8 7 13 8.7.13 [3.17.38.11] CASWIVVGATRTDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgctgacacggctgtgtattactgtgcgagttggatagtagtgggagctacccggaccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
910 909 M01495:47:000000000-JFBTW:1:2101:20424:8579_1:N:0 productive (see comment) Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 962 92.38 206/223 nt 91.93 205/223 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD2-8*01 F 1 8 8 7 8.8.7 [3.17.38.11] CAKLPMGDW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT at codon 36 of V-REGION: 'ACT' (3 nucleotides at position 26 to 28 in the user submitted sequence), (do not cause frameshift); tgcggcctctggattcagcttcagtACTaactactggatggactgggtccgccaagctcctgggaaggggctggtgtgggtctcacgtattaacactgatggaagtggcgcaaattacgcggacgccgtgaggggccgattcaccatctccagggacagcgccaagaacactctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcgaaattgcctatgggtgactggggccagggaaccctagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
911 910 M01495:47:000000000-JFBTW:1:2101:2943:8740_1:N:0: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDVVGATALFDYW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgtagtgggagctacagctctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
912 911 M01495:47:000000000-JFBTW:1:2101:21862:8786_1:N:0 productive Homsap IGHV4-39*07 F 1058 96.46 218/226 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-22*01 F 2 10 7 12 10.7.12 [3.17.38.11] CARHVYYDNWFDPW in-frame + cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagacatgtgtactatgataactggttcgacccctggggccagggaaccctggtcaccgtctcgtcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
913 912 M01495:47:000000000-JFBTW:1:2101:26087:9625_1:N:0 productive Homsap IGHV3-48*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDDNHYGDYKRVTFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtatctgcaaatgaacagcctgagagacgaggacacggctgtgtattactgtgcgagagatgataaccactacggtgactacaaacgcgtaacctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
914 913 M01495:47:000000000-JFBTW:1:2101:24613:9774_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1200 100.00 240/240 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 2 8 8 12 8.8.12 [9.17.38.11] CARQGNGGYGQDYW in-frame + tctctgaagatctcctgtaagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaagggaacgggggttacggtcaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 340 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
915 914 M01495:47:000000000-JFBTW:1:2101:8047:11229_1:N:0 productive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 801 96.49 165/171 nt 95.91 164/171 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*01 F 3 X 7 18 X.7.18 [X.12.38.11] CAKVGDRDVVVPAAICFDYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 64 of V-REGION: 3 nucleotides (from position 55 in the user submitted sequence), (do not cause frameshift) caggctccagggaagggactggagtgggtctcagctattagtactagtggtggcacattctacgtagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagttggggaccgggatgtagtagtaccagctgctatctgctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 289 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
916 915 M01495:47:000000000-JFBTW:1:2101:4406:11313_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ1*01 F 161 78.85 41/52 nt Homsap IGHD6-6*01 F 3 8 8 19 8.8.19 [3.17.38.11] CASLPGQLVAPGEKVGYFQNW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagcctgcctgggcagctcgtcgctcccggggagaaggtgggatacttccagaactggggccagggcaacatagtaaacgaatcctcagggagtgcatccgcgccagccatattcccccgcgtcacctgtgcgaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
917 916 M01495:47:000000000-JFBTW:1:2101:25645:11641_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD5-18*01 F 1 10 7 11 10.7.11 [3.17.38.11] CARADTENWFDPW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcggacacagaaaactggttcgacccctggggccagggagccctggtcactgtctcctcagggagtgcatccgcccgaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
918 917 M01495:47:000000000-JFBTW:1:2101:6264:11867_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 999 91.88 215/234 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-10*01 F 3 8 8 14 8.8.14 [7.17.38.11] CAREERVRGSYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) ctatgcgccttgccagcctctggattcacctttagcagccatgccatgaggtgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtggtagtggtggtagcacatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaggaaagggttcggggttcttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 340 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
919 918 M01495:47:000000000-JFBTW:1:2101:26955:12176_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARGGRGYYDSSGPTDAFDIW in-frame + gcttctggaggcaccttaagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaggacgcggttactatgatagtagtggccccaccgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
920 919 M01495:47:000000000-JFBTW:1:2101:15079:12302_1:N: No rearrangement found Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F (see comment) 573 73.52 161/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found low V-REGION identity (73.52%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgaggggaagcagtggagtacatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 290 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
921 920 M01495:47:000000000-JFBTW:1:2101:18477:12740_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*02 F 1 8 8 9 8.8.9 [3.17.38.11] CLGELSLYRYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgcttgggggagttatcgttatatcgctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
922 921 M01495:47:000000000-JFBTW:1:2101:20328:13658_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1068 98.63 216/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-16*02 F 1 8 8 14 8.8.14 [2.17.38.11] CARPSADVSSVAFDIW in-frame + gcttctggttacacctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccgtcggcggacgtttcttcggttgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
923 922 M01495:47:000000000-JFBTW:1:2101:9473:14224_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD1-26*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARVFLGATDYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtgtttctgggagctactgattactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
924 923 M01495:47:000000000-JFBTW:1:2101:7768:14823_1:N:0 productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARVRSDSSGWYYFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagttaggtccgatagcagtggctggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
925 924 M01495:47:000000000-JFBTW:1:2101:28272:15302_1:N: productive Homsap IGHV3-30*14 F, or Homsap IGHV3-30-3*01 F 1034 95.96 214/223 nt Homsap IGHJ4*03 F (see comment) 204 91.67 44/48 nt Homsap IGHD6-19*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARVGSGWYFDYW in-frame + other possibilities: Homsap IGHJ3*01 and Homsap IGHJ3*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcaccttcagtggctatgctatggactgggtccgccaggctccgggcaaggggctggagtgcgtggcacttatttcatatgatggaagcaataaatactacacagactccgtgaggggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagtaggcagtggctggtactttgactactggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
926 925 M01495:47:000000000-JFBTW:1:2101:27447:15900_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F (see comment) 971 92.83 207/223 nt Homsap IGHJ4*02 F 78 62.50 30/48 nt Homsap IGHD3-3*01 F 2 8 8 15 8.8.15 [3.17.38.11] SERDIDIWNGYYIPAYM in-frame + TRP 118 not identified 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcaccttcagtagttatgagatgaactgggtccgccaggctccagggaaggggctggagtgggtctcttccattagtagtagtagtagttacacacactacgcagactctgtgaagggtcgattcaccatctccagagacaacgctaagaactcactttatctgcaaaagaacagcctgagagccgatgactcggttgtgtattacagtgagagagatatcgatatttggaatggttattatattccggcgtacatgggccagataaccctgatgaccgtcacctatgagagtgcatccgccccaacccatttccccctcgtttcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
927 926 M01495:47:000000000-JFBTW:1:2101:4799:16076_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-26*01 F 1 8 8 15 8.8.15 [2.17.38.11] CATDLLLVGADRGLGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagatctgttgttagtgggagccgaccgaggcttgggatactggggccagggaaccctagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
928 927 M01495:47:000000000-JFBTW:1:2101:4310:16610_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAKGARGFYDSSGYPDIYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagcctccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggagcacgggggttctatgatagtagtggttatcccgatatatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
929 928 M01495:47:000000000-JFBTW:1:2101:23624:16727_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD5-24*01 ORF 3 8 8 13 8.8.13 [3.17.38.11] CARHRRDGYNYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatcgtagagatggctacaattactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
930 929 M01495:47:000000000-JFBTW:1:2101:21155:16779_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-1*01 F 2 8 7 15 8.7.15 [3.17.38.11] CAREGSERLDSPNFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagaaggatccgaacgactggatagtcccaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
931 930 M01495:47:000000000-JFBTW:1:2101:17586:17123_1:N: productive Homsap IGHV3-11*01 F 1079 98.21 219/223 nt Homsap IGHJ6*02 F 224 85.25 52/61 nt Homsap IGHD4-11*01 ORF 2 8 8 12 8.8.12 [3.17.38.11] CARDRISNYGMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatattatgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcaccgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattattgtgcgagagatcggatcagtaactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
932 931 M01495:47:000000000-JFBTW:1:2101:7356:17281_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-13*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARDVGSSWQMGGSWFDPW in-frame + gcttctggaggcaccttcagcagctatagtctcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgtcggcagcagctggcagatgggaggttcctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
933 932 M01495:47:000000000-JFBTW:1:2101:6013:17702_1:N:0 productive Homsap IGHV1-69*10 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-21*01 F 3 8 8 12 8.8.12 [2.17.38.11] CAVVVGIDQYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatccttggtatagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggttgtggtggggattgatcagtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
934 933 M01495:47:000000000-JFBTW:1:2101:3126:17849_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD2-2*01 F 2 8 8 26 8.8.26 [2.17.38.11] CARDPLKGYCSSTSCPRQYYYYYGMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcccctaaaaggatattgtagtagtaccagctgcccgcgccaatactactactactacggtatggacgtctggggccaagggaccacggtcaccatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 392 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
935 934 M01495:47:000000000-JFBTW:1:2101:19924:18049_1:N: unproductive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1037 96.82 213/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-23*01 ORF 2 8 7 11 8.7.11 [3.17.38.11] CARGRYGGRPDYW in-frame + rearranged sequence, stop codons cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaaggggctggagtggattgggtaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggcgctacggtggtagacctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
936 935 M01495:47:000000000-JFBTW:1:2101:8458:18058_1:N:0 productive Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-19*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGGQWLGYYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacagtactagtagtggtagcaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatggacaacctgagagttgaggacacggctgtttattactgtgcgagaggagggcagtggctgggttactactttgactactggggccagggaatcctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
937 936 M01495:47:000000000-JFBTW:1:2101:23281:18509_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARPDQTYYYDSSGYNYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaccggaccagacgtattactatgatagtagtggttataactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
938 937 M01495:47:000000000-JFBTW:1:2101:15480:18609_1:N: productive Homsap IGHV1-69*04 F, or Homsap IGHV1-69*09 F 1050 97.72 214/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD7-27*01 F 1 8 8 11 8.8.11 [2.17.38.11] CATRELGYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaaggatcatccctatccttggtatagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaactagagaacttggctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
939 938 M01495:47:000000000-JFBTW:1:2101:6528:18699_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 17 8.8.17 [3.17.38.11] CAKDSYSGSYYERDYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgaaagattcgtatagtgggagctactacgagagggactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
940 939 M01495:47:000000000-JFBTW:1:2101:7979:19508_1:N:0 productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-15*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARDVSEVMVAAPDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatgtatccgaggtgatggtagctgctcctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
941 940 M01495:47:000000000-JFBTW:1:2101:8975:19721_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD1-26*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAIENSGSYRGNWFDPW in-frame + aaggcttctggatacagctttaccagctcctggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgattgagaatagtgggagctaccgagggaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
942 941 M01495:47:000000000-JFBTW:1:2101:22091:19936_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD2-15*01 F 3 8 8 13 8.8.13 [2.17.38.11] CAREAAPQDYYMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggctgctccccaggactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
943 942 M01495:47:000000000-JFBTW:1:2101:10704:20152_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD5-24*01 ORF 3 8 8 15 8.8.15 [2.17.38.11] CARGYRPNYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagccgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggctacagaccaaactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
944 943 M01495:47:000000000-JFBTW:1:2101:7810:20536_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ3*01 F, or Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD4-23*01 ORF 2 8 8 15 8.8.15 [3.17.38.11] CARRLYGGNPSDAFDFW in-frame + aagggttctggatacagctttaccagttactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacagcgccatgtattactgtgcgagacgcctctacggtggtaacccttctgatgcttttgatttctggggccaggggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
945 944 M01495:47:000000000-JFBTW:1:2101:22289:20644_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD3-10*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARRSQGRAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatgggcaacatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgttcccagggccgcgcttttgatatttggggccaagggacaatggtcagcgtctcttcagggagtgcatccgcccaaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
946 945 M01495:47:000000000-JFBTW:1:2101:8270:20657_1:N:0 productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 1005 95.43 209/219 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARASSSSGYVDWYFDLW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcttcctccagtagtggttatgtagactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
947 946 M01495:47:000000000-JFBTW:1:2101:5479:20664_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1019 95.91 211/220 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-22*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARGSYDSSGYYSDYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctgggtccgccaggctccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggagctatgatagtagtggttattactctgactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
948 947 M01495:47:000000000-JFBTW:1:2101:12076:20698_1:N: productive Homsap IGHV1-2*02 F 1032 96.80 212/219 nt Homsap IGHJ5*02 F (see comment) 120 70.59 36/51 nt Homsap IGHD6-13*01 F 2 8 8 8 8.8.8 [2.17.38.11] CARGVAAAPW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacctccattagcacagcctacatggaactgagcgggctgagatctgaggacacggccgtgtattactgtgcgagaggggtagcagcagcaccttggggccagggaacccaggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
949 948 M01495:47:000000000-JFBTW:1:2101:18940:21134_1:N: productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 3 9 7 15 9.7.15 [3.17.38.11] CASQPGYSYGSRPFDYW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagccaacccggatacagctatggttcacgcccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
950 949 M01495:47:000000000-JFBTW:1:2101:16738:22136_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 942 92.24 202/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARGAYYYDSSGYYRFDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggcgtattactatgatagtagtggttattaccgctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
951 950 M01495:47:000000000-JFBTW:1:2101:16269:22633_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD5-12*01 F 3 8 7 18 8.7.18 [3.17.38.11] CARGISGYSGYYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctcccttaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggataagtggatatagtggctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
952 951 M01495:47:000000000-JFBTW:1:2101:7146:22635_1:N:0 No rearrangement found Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatcgacccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 277 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
953 952 M01495:47:000000000-JFBTW:1:2101:17539:23173_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-21*02 F 2 8 8 17 8.8.17 [2.17.38.11] CARGGDGGGDSYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggggtgatggtggcggtgactcttactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
954 953 M01495:47:000000000-JFBTW:1:2101:16939:24016_1:N: No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 276 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
955 954 M01495:47:000000000-JFBTW:1:2101:16128:24576_1:N: unproductive (see comment) Homsap IGHV3-48*04 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARASFGGRYFDYW in-frame + rearranged sequence, stop codons tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgtttcaccatctccagagacaacgccaaggactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagcttcattcggggggcggtactttgactactggtgctagggaaccctgttcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
956 955 M01495:47:000000000-JFBTW:1:2101:20873:24870_1:N: productive Homsap IGHV3-30*07 F, or Homsap IGHV3-30*16 F 1025 95.52 213/223 nt Homsap IGHJ5*02 F 156 78.43 40/51 nt Homsap IGHD6-13*01 F 1 8 8 9 8.8.9 [3.17.38.11] CARGDSSRWSW in-frame + tgcagtctcgggattcaccttcattagctatgctatgcactggctccgccaagccccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggggacagcagcaggtggagctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
957 956 M01495:47:000000000-JFBTW:1:1116:11917:4098_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARDAGLRRHSSGYYGFLGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatgcgggattaaggaggcatagtagtggttattacggattcttgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
958 957 M01495:47:000000000-JFBTW:1:1116:21140:5461_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARREWGATIDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggagtggggagctactattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
959 958 M01495:47:000000000-JFBTW:1:1116:10442:5693_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1205 100.00 241/241 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 3 8 8 19 8.8.19 [9.17.38.11] CAKDILEWTVTMIEGAGWDYW in-frame + gtccctgagactctcctgtgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatattctagagtggacggttactatgatagaaggagccggctgggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
960 959 M01495:47:000000000-JFBTW:1:1116:23330:5942_1:N:0 productive Homsap IGHV1-2*02 F 978 94.06 206/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARGYYDSSGYYPADYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggttactatgatagtagtggttactacccggcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgacccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
961 960 M01495:47:000000000-JFBTW:1:1116:6906:6859_1:N:0: productive Homsap IGHV4-59*12 (F) 1037 96.82 213/220 nt Homsap IGHJ3*01 F 214 92.00 46/50 nt Homsap IGHD6-6*01 F 1 8 7 10 8.7.10 [3.17.38.11] CAKNGRYAIDVW in-frame + cactgtctctggtggctccatcagtagttactactggagttggatccggcagcccccagggaagggactggagtggattgcgtatctctattacagtgagagcaccaactacaacccctccctcaagagtcgagtcactatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgaatattactgtgcgaaaaatggccgctatgctattgatgtctggggccaagggacaaaggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
962 961 M01495:47:000000000-JFBTW:1:1116:24238:7280_1:N:0 productive Homsap IGHV1-2*02 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 1 8 8 20 8.8.20 [2.17.38.11] CARDVLRFLEWSTPYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagacgtattacgatttttggagtggtctaccccctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
963 962 M01495:47:000000000-JFBTW:1:1116:24218:7473_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-16*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARRGGLNGDYVRGGYDYW in-frame + aagggttctggatacagctttaccaagtactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctgatgactctgatagcagatacagcccgtccttccaaggccaggtcatcatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggggggggctgaacggtgactacgttcgcgggggttatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
964 963 M01495:47:000000000-JFBTW:1:1116:8547:7704_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARARIPGGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgcgaattccggggggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
965 964 M01495:47:000000000-JFBTW:1:1116:9803:7819_1:N:0: productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-10*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARAQIWFGENPYGMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagcccagatatggttcggggagaatccctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
966 965 M01495:47:000000000-JFBTW:1:1116:3332:8404_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD1-7*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARLELNWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactggaactaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
967 966 M01495:47:000000000-JFBTW:1:1116:15505:9514_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKDRTYYSVYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagataggacttattactcggtctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
968 967 M01495:47:000000000-JFBTW:1:1116:21979:10053_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ5*02 F 165 80.39 41/51 nt Homsap IGHD4-23*01 ORF 2 8 8 13 8.8.13 [3.17.38.11] CARVDYGGNSEGETW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacattctacgcagactccgtgaagggccggttcaccgtctccagagacaattccatgaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagttgactacggtggtaactccgagggggagacttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
969 968 M01495:47:000000000-JFBTW:1:1116:19702:11035_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-23*01 ORF 2 8 8 11 8.8.11 [2.17.38.11] CARWDYGGFIDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggtgggactacggtggtttcattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
970 969 M01495:47:000000000-JFBTW:1:1116:9561:11231_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD3-9*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARNFDTGSYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaacttcgacacgggttcctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
971 970 M01495:47:000000000-JFBTW:1:1116:5752:11559_1:N:0 productive Homsap IGHV3-30*04 F, or Homsap IGHV3-30-3*03 F or Homsap IGHV3-33*08 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-10*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARADLFNPFDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagcggatctatttaacccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
972 971 M01495:47:000000000-JFBTW:1:1116:18680:12070_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 992 94.55 208/220 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 1 8 7 16 8.7.16 [3.17.38.11] CARRVGEIYYYYYGMDVW in-frame + cactgtctctggtgactccatcagcagttactactggagctggatccggcagtccccagggacgggactggaatacattggatatatctatcacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcaatggacacgtccaagaaccagttctccctgaggctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaagagtgggagagatctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
973 972 M01495:47:000000000-JFBTW:1:1116:24326:12571_1:N: productive Homsap IGHV4-59*04 F, or Homsap IGHV4-59*12 (F) 1037 96.82 213/220 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-3*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARSYYDFWSGYRDW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggcctggagtggattgggtacatctatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaggtcctattacgatttttggagtggttatagggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
974 973 M01495:47:000000000-JFBTW:1:1116:8693:13001_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-8*02 F 2 8 7 7 8.7.7 [3.17.38.11] CAAGGGDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcggctggcggtggagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
975 974 M01495:47:000000000-JFBTW:1:1116:15345:13095_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD1-7*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARHFPPLTHSRELNYYYYGMDVW in-frame + aagggttctggatacagtttcaccaattactggatcgcctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattttccccccctcacccatagcagggaactaaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
976 975 M01495:47:000000000-JFBTW:1:1116:6674:13826_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-16*02 F 2 8 8 17 8.8.17 [3.17.38.11] CARLYSDYVWGSYRYTDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactttattctgattacgtttgggggagttatcgttatactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
977 976 M01495:47:000000000-JFBTW:1:1116:24734:14281_1:N: productive Homsap IGHV1-8*02 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*02 F 1 8 8 15 8.8.15 [2.17.38.11] CARGIGRLGELSLWNYW in-frame + gcttctggttacacctttaccagctatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtataggacgtttgggggagttatcgttatggaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
978 977 M01495:47:000000000-JFBTW:1:1116:17669:14377_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1014 95.89 210/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-16*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARASRDDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagtttcagggcagggtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcgtctcgggacgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
979 978 M01495:47:000000000-JFBTW:1:1116:21272:15958_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-16*02 F 1 8 8 20 8.8.20 [3.17.38.11] CASSGMGELSPPPYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgtcttccgggatgggggagttatcgccgccgccttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
980 979 M01495:47:000000000-JFBTW:1:1116:18945:16381_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-26*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARRQDGEGGHGGSGAFDIW in-frame + aagggttctggatacagctttaccgcctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggcaggacggagaaggagggcacggagggtccggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
981 980 M01495:47:000000000-JFBTW:1:1116:10899:16387_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1061 97.31 217/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-26*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKLRKELLRFDAFDIW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactatatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaactgaggaaggagctactacgttttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
982 981 M01495:47:000000000-JFBTW:1:1116:11618:16479_1:N: productive Homsap IGHV4-34*03 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-18*01 F 1 8 7 11 8.7.11 [3.17.38.11] CARDHLDTAMDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccataacagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagatcatctggatacagctatggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
983 982 M01495:47:000000000-JFBTW:1:1116:26284:16712_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARGSSWYSGASFRDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcagcagctggtactcgggggcctccttcagagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
984 983 M01495:47:000000000-JFBTW:1:1116:19987:16826_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD6-19*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARSVAVAGRVWGDYYMDVW in-frame + gcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaagtgtagcagtggctggtcgggtgtggggcgactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcaggaagtgcatccgccccaacccttttccccttcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
985 984 M01495:47:000000000-JFBTW:1:1116:16642:18317_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CAKDRLNSGWNDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcggttaaacagtggctggaacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtcagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
986 985 M01495:47:000000000-JFBTW:1:1116:14427:19576_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-2*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARAQYYDYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgcagtattacgattacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
987 986 M01495:47:000000000-JFBTW:1:1116:13630:20200_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD6-6*01 F 1 8 7 19 8.7.19 [3.17.38.11] CARERRVEYSSSSVRWWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagttaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagagaggagggtcgagtatagcagctcgtctgttaggtggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
988 987 M01495:47:000000000-JFBTW:1:1116:12811:20389_1:N: productive Homsap IGHV4-59*12 (F) 1091 99.55 219/220 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD4-23*01 ORF 2 8 7 16 8.7.16 [3.17.38.11] CARRRFYGGNPYWYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagacgacgattctacggtggtaacccttactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
989 988 M01495:47:000000000-JFBTW:1:1116:25995:20652_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1106 99.55 222/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-10*01 F 2 8 8 9 8.8.9 [3.17.38.11] CVRGRDWFDLW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgtgtgagggggagggactggttcgacctctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
990 989 M01495:47:000000000-JFBTW:1:1116:15939:21363_1:N: unproductive (see comment) Homsap IGHV3-11*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 X 8.8.X [3.17.38.11] CARVLSGGRFTISRDNSKNTLYLQMNSLRAEDGCVLLCERAEPYHVLL***WL#FDYW out-of-frame + rearranged sequence, stop codons tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagtccttagcgggggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacggctgtgtattactgtgcgagagggcggaaccctatcacgtattactatgatagtagtggttattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 484 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
991 990 M01495:47:000000000-JFBTW:1:1116:15011:21826_1:N: unproductive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-7*01 F 1 8 8 X 8.8.X [2.17.38.11] CAREELA#YYFDYW out-of-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggaactagcccgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 349 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
992 991 M01495:47:000000000-JFBTW:1:1114:17550:4922_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD4-17*01 F 2 8 8 25 8.8.25 [2.17.38.11] CARDYLAVDDYGDYFGRPYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagactatctggcggttgatgactacggtgactactttgggcgaccctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
993 992 M01495:47:000000000-JFBTW:1:1114:20556:5322_1:N:0 productive (see comment) Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 661 99.25 133/134 nt 98.51 132/134 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-24*01 ORF 3 8 X 17 8.X.17 [3.2.31.11] CARVSAVTTSGYNYAFDIW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 88 nucleotides (from position 42 in the user submitted sequence), (cause frameshift) aagggttctggaaacagctttaccagctactggatcagctgggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagtttcggcggtgactacttcgggctacaattacgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 280 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
994 993 M01495:47:000000000-JFBTW:1:1114:13190:7581_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD5-18*01 F 3 8 7 19 8.7.19 [3.17.38.11] CARDLYSYGSSLAALDGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatctgtacagctatggttcgtcgctggcggcgttagacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
995 994 M01495:47:000000000-JFBTW:1:1114:4797:7882_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-18*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARDVDTAMVTGYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgtggatacagctatggttaccggctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
996 995 M01495:47:000000000-JFBTW:1:1114:16660:8066_1:N:0 productive Homsap IGHV3-7*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-12*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARGYSGYVHYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagggtatagtggctacgtccactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
997 996 M01495:47:000000000-JFBTW:1:1114:18143:9132_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-10*01 F 2 8 7 16 8.7.16 [3.17.38.11] CAREHEEDPGLGNWFDPW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagaacacgaggaggaccctgggttggggaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
998 997 M01495:47:000000000-JFBTW:1:1114:11940:9636_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*11 F or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-15*01 F 1 8 8 11 8.8.11 [2.17.38.11] CASKLLRGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatccttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtaagctgctacgtggatggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
999 998 M01495:47:000000000-JFBTW:1:1114:12973:9775_1:N:0 productive Homsap IGHV3-43D*04 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-26*01 F 3 8 8 10 8.8.10 [3.17.38.11] CASQNSGSYYYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctagagtgggtctctcttattagttgggatggtggtagcacatactatgcagactctgtgaagggtcgattcaccatctccagagacaacagcaaaaactccctgtatctgcaaatgaacagtctgagagctgaggacaccgccttgtattactgtgcatcccagaatagtgggagctactactactggggccagggaatcctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1000 999 M01495:47:000000000-JFBTW:1:1114:22996:10315_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD4-11*01 ORF 1 8 8 19 8.8.19 [2.17.38.11] CARSGGRQYRYRYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatctgggggacgacagtacaggtaccgctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1001 1000 M01495:47:000000000-JFBTW:1:1114:10557:10319_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-9*01 F 2 8 8 22 8.8.22 [2.17.38.11] CARESPLTVYDILTGAYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagtcccccctcacagtttacgatattttgactggggcatactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1002 1001 M01495:47:000000000-JFBTW:1:1114:17576:10332_1:N: productive Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-8*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARGREYGWFDPW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattggtagtagtggcaataccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctatttattactgtgcgagaggacgggagtatggctggttcgacccctggggccagggaaccctggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1003 1002 M01495:47:000000000-JFBTW:1:1114:28486:10452_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-3*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARGGLESDYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggctcctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcggattggaatcggactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1004 1003 M01495:47:000000000-JFBTW:1:1114:22898:10747_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD4-23*01 ORF 3 8 8 23 8.8.23 [3.17.38.11] CARANLLRTTVVTPRKDRNWYFDLW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagccaatctactccggactacggtggtaactccgaggaaggatcggaactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1005 1004 M01495:47:000000000-JFBTW:1:1114:11055:10990_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [3.17.38.11] CAKDQAAYYYDSSGYYPDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcaagccgcctattactatgatagtagtggttactaccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1006 1005 M01495:47:000000000-JFBTW:1:1114:13694:11009_1:N: unproductive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-3*01 F 1 8 7 X 8.7.X [3.17.38.11] CARATDFWSGYSIN#YYYYYMDVW out-of-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagcaaccgatttttggagtggttattcaataaaccttactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1007 1006 M01495:47:000000000-JFBTW:1:1114:20381:11237_1:N: productive Homsap IGHV3-21*04 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARDDYGYFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagatgactacggttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1008 1007 M01495:47:000000000-JFBTW:1:1114:2840:11250_1:N:0 productive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 914 97.89 186/190 nt 97.37 185/190 nt Homsap IGHJ6*02 F 203 85.45 47/55 nt Homsap IGHD2-21*01 F 3 8 8 10 8.8.10 [3.6.38.11] CARDIANGMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 33 nucleotides (from position 41 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcaccttcagtagctatgctatgcactgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatattgctaacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 315 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1009 1008 M01495:47:000000000-JFBTW:1:1114:3370:11834_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 1 8 7 14 8.7.14 [3.17.38.11] CARVVDRRNVGSFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtcgtcgaccgccgtaatgtggggtcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1010 1009 M01495:47:000000000-JFBTW:1:1114:16538:11924_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1070 97.76 218/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD6-13*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARARGSSSNDAFAIW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttacatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagatctgacgacacggccgtgtattactgtgcgagagcgcggggtagcagcagcaatgatgcttttgctatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttcccccacgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1011 1010 M01495:47:000000000-JFBTW:1:1114:16790:12414_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-9*01 F 1 8 8 12 8.8.12 [3.17.38.11] CAQASYFDWLFDPW in-frame + tgcagcctctggattcagctttagtaactatgccatgagttgggtccgccaggctccagggaaggggctggagtgggtctcagcaattagtggtagtggtggcaatacatactacgcagactccgtgaagggccggttcaccatctccagagacaaatccaagaacaccctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgcaagcctcatattttgactggttgttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1012 1011 M01495:47:000000000-JFBTW:1:1114:20659:12718_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-16*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARHIQGGDMVPPWDAFDIW in-frame + ggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatattcaggggggcgatatggtccctccctgggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1013 1012 M01495:47:000000000-JFBTW:1:1114:11050:12747_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1034 95.96 214/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD1-14*01 ORF 3 8 8 15 8.8.15 [3.17.38.11] CAREGNKQLHSNWFDPW in-frame + tgcagcctctggattcaccttcagtagttatggcatgtactgggtccgccaggctccagggagggggctggagtgggtctcatccattatcagtagtagtacttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctacaaatgaacagcctgagagccgaggatacggctgtgtattactgtgcgagagaaggaaataagcagctccattcaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1014 1013 M01495:47:000000000-JFBTW:1:1114:5098:13597_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1064 98.18 216/220 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD4-23*01 ORF 2 8 7 14 8.7.14 [3.17.38.11] CAREEDYGGNNWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctcttacagtgggagcaccaactacaacccctccctcaagagtcgagtcactatatcagtagacacgtccaagaaccagttctctctgaagctgagctctgtgaccgctgtggacacggccgtgtattactgtgcgagagaggaggactacggtggcaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1015 1014 M01495:47:000000000-JFBTW:1:1114:23363:13645_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 827 85.65 191/223 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKGQIGTYVVFDIW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaggctccagggaaggggctggaatgggtcgcaggttgtagttatgacggtgatgtcacatactacgcagactccgtgaggggccggttcagcatctccagagacaattccaggaacacagtgtttttgcaaatgaatagcctgagagccgaggacacggccatttatcactgtgcgaaaggccagattgggacctacgtcgtgtttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1016 1015 M01495:47:000000000-JFBTW:1:1114:28426:14249_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ6*04 F (see comment) 153 71.43 45/63 nt Homsap IGHD2-2*02 F 3 8 8 19 8.8.19 [2.17.38.11] CARGPDIVVVPAAILSSMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtccggatattgtagtagtaccagctgctatactatcgtctatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1017 1016 M01495:47:000000000-JFBTW:1:1114:6162:14271_1:N:0 productive Homsap IGHV3-30-3*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-23*01 ORF 2 8 8 9 8.8.9 [3.17.38.11] CARGDGGFDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagcaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagaggagacgggggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1018 1017 M01495:47:000000000-JFBTW:1:1114:11814:14419_1:N: productive Homsap IGHV4-59*12 (F) 1091 99.55 219/220 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARHRGYYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagacatcgtgggtactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1019 1018 M01495:47:000000000-JFBTW:1:1114:24390:14587_1:N: productive Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ6*03 F 215 83.61 51/61 nt Homsap IGHD2-2*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDPVLYSPMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacactgtatcttcaaatgcacagcctgagagccgaggacacggccgtgtattactgtgcgagagatcccgtgttgtactcccccatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1020 1019 M01495:47:000000000-JFBTW:1:1114:9105:14951_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD5-18*01 F 3 8 8 21 8.8.21 [3.17.38.11] CARHGGYSYGTGPDYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacggcgggtacagctatgggacggggccagactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1021 1020 M01495:47:000000000-JFBTW:1:1114:20013:16848_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-15*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDLAVVVAATSGVGW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatctcgcagtggtggtagctgctacgtcgggtgttggctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1022 1021 M01495:47:000000000-JFBTW:1:1114:16454:16891_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-10*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARRSGSGSYYMYNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagaagcggttcggggagttattatatgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1023 1022 M01495:47:000000000-JFBTW:1:1114:3960:17142_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1091 99.55 219/220 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-8*02 F 1 8 7 9 8.7.9 [3.17.38.11] CARSRDAFDIW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcaaggtccagggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1024 1023 M01495:47:000000000-JFBTW:1:1114:26477:17355_1:N: productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1078 96.52 222/230 nt Homsap IGHJ6*03 F (see comment) 166 74.19 46/62 nt Homsap IGHD2-21*02 F 3 10 9 13 10.9.13 [2.17.38.11] CARGLIVVVPYMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) ccatctccggggacagtgtctccagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaagtccaagtggtacactgattatgcagaatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcaactgaaatctgtgactcccgaggactcggctgtgtattactgtgcaagagggcttattgtggtggtgccttacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1025 1024 M01495:47:000000000-JFBTW:1:1114:11376:18566_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDRSIAASWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcggagcatagcagcatcttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1026 1025 M01495:47:000000000-JFBTW:1:1114:3879:19781_1:N:0 productive Homsap IGHV1-18*01 F 1030 100.00 206/206 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 1 5 8 9 5.8.9 [X.17.38.11] CARAIGSGDYW in-frame + cctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcgatcgggtcgggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 297 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1027 1026 M01495:47:000000000-JFBTW:1:1114:16814:19974_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-3*02 F 3 8 8 16 8.8.16 [3.17.38.11] CARDVGGLISLYYQFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgtcggtgggcttatcagcctttattaccaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1028 1027 M01495:47:000000000-JFBTW:1:1114:20212:20017_1:N: productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F (see comment) 156 78.43 40/51 nt Homsap IGHD1-26*01 F 1 8 8 10 8.8.10 [3.17.38.11] CAKDILDGGASW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatatactagacgggggagctagctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1029 1028 M01495:47:000000000-JFBTW:1:1114:21470:21205_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARDPYESSGPDYW in-frame + gcttctggttacacctttaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatccctacgaaagcagtggccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1030 1029 M01495:47:000000000-JFBTW:1:1114:21710:21834_1:N: productive Homsap IGHV4-61*01 F 1058 96.46 218/226 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-24*01 ORF 2 10 7 8 10.7.8 [3.17.38.11] CARGWAPDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggatgggctcctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1031 1030 M01495:47:000000000-JFBTW:1:1113:17461:4489_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 951 92.69 203/219 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD4-23*01 ORF 3 8 8 12 8.8.12 [2.17.38.11] CARSRTVVSAALYW in-frame + gcatctggatacacgttcaccagtcatcacatgcactgggtgcgacaggcccctggacaagggcttgagtggataggaataatcaaccctaatggtggtagtacagcctacgcacagaagttccagggcagagtcaccgtgaccagggacacgtccacgagcacagtctacatggagatgagtagcctgagatctgaagacacggccgtatattactgtgcgcgatcccgtacggtggtaagtgcggcgctctactggggccagggaaccctggtcaccgtctccacagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1032 1031 M01495:47:000000000-JFBTW:1:1113:22959:4515_1:N:0 unproductive (see comment) Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1051 99.53 211/212 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 7 8 14 7.8.14 [X.17.38.11] CARGVCSSTSWLFDYW in-frame + rearranged sequence, stop codons gatacaccttcactagctatgctatgcattgggtgcgccaggccccctgacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagaggggtttgtagtagtaccagctggttatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 318 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1033 1032 M01495:47:000000000-JFBTW:1:1113:11271:4789_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-2*01 F 3 8 7 15 8.7.15 [3.17.38.11] CASGEVPAAMFLWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagcggagaagtaccagctgctatgtttctctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1034 1033 M01495:47:000000000-JFBTW:1:1113:22992:5357_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-21*01 F 1 8 8 17 8.8.17 [3.17.38.11] CAKSGFLQYPYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaagtcgggttttctacagtacccttactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1035 1034 M01495:47:000000000-JFBTW:1:1113:11904:5480_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1168 98.74 236/239 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD4-23*01 ORF 2 8 8 16 8.8.16 [8.17.38.11] CAKDISPRRIYYYGMDVW in-frame + ccctgagactctcctgtgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggccttgtattactgtgcaaaagatatctccccgcgacgcatctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1036 1035 M01495:47:000000000-JFBTW:1:1113:17213:5558_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [2.17.38.11] CAREPYYDSSGYLHDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggttcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaaccttactatgatagtagtggttatctacatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1037 1036 M01495:47:000000000-JFBTW:1:1113:13510:6484_1:N:0 productive Homsap IGHV4-59*08 F 1064 98.18 216/220 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-15*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARDGSSPSWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatattagtagacacgtccaagaaccagttctttctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagatggcagcagcccctcttggttcgacccctggggccagggaaccctggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1038 1037 M01495:47:000000000-JFBTW:1:1113:5831:6562_1:N:0: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-8*02 F 1 8 7 17 8.7.17 [3.17.38.11] CARDSESWRLYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattccgaaagctggaggttgtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1039 1038 M01495:47:000000000-JFBTW:1:1113:11893:7082_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD4-17*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARDFYGDYDLQYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatttctacggtgactacgacttacaatactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1040 1039 M01495:47:000000000-JFBTW:1:1113:16908:8354_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 689 91.41 149/163 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 1 X 8 13 X.8.13 [X.8.38.11] CARFQIGDNAIFDYW in-frame + gaaggggctggagtgggtctcagctattggtggaggtggtgatcccacattctacgcaggctccgtgaagggccggttcaccatctccagagacaattcccagaacacgttgtctctgcaaatgaacagcctgggagccgaggactcggccatatattactgtgcgagattccagataggtgataatgcaatctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 266 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1041 1040 M01495:47:000000000-JFBTW:1:1113:25973:8579_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARLRGYCRSTSCYGWYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactcggataccagatacagtccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgaggggatattgtcgtagtaccagctgctatgggtggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1042 1041 M01495:47:000000000-JFBTW:1:1113:24745:9086_1:N:0 productive Homsap IGHV4-59*04 F, or Homsap IGHV4-59*12 (F) 1046 97.27 214/220 nt Homsap IGHJ6*03 F 231 89.47 51/57 nt 8 7 9 8.7.9 [3.17.38.11] CARGSYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtacatccattacagtgggggcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggctcctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1043 1042 M01495:47:000000000-JFBTW:1:1113:28561:9973_1:N:0 productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ3*02 F 160 80.00 40/50 nt Homsap IGHD6-25*01 F 2 8 8 11 8.8.11 [3.17.38.11] CASGPEKGIAAIW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtgtattactgtgcgagcggccccgaaaaaggtatagccgcgatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1044 1043 M01495:47:000000000-JFBTW:1:1113:5534:10343_1:N:0 productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD6-13*01 F 2 8 8 25 8.8.25 [3.17.38.11] CARVGSVGDGAAGITTYYYYYYYMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagttgggagtgtgggggacggagcagctggcataacgacttattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 393 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1045 1044 M01495:47:000000000-JFBTW:1:1113:17546:11040_1:N: productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 690 100.00 138/138 nt Homsap IGHJ4*03 F (see comment) 168 83.33 40/48 nt Homsap IGHD1-26*01 F 1 X 8 18 X.8.18 [X.X.38.11] CARENIPFIVGATAPLFDYW in-frame + other possibilities: Homsap IGHJ3*01 and Homsap IGHJ3*02 (highest number of consecutive identical nucleotides) atcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagagaacataccgtttatagtgggagctactgcgccactatttgactactggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 256 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1046 1045 M01495:47:000000000-JFBTW:1:1113:26862:11380_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ3*01 F 169 82.00 41/50 nt Homsap IGHD6-25*01 F 3 8 7 12 8.7.12 [3.17.38.11] CAREQRHSIPKDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagagcagcggcactctataccgaaggacgtctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1047 1046 M01495:47:000000000-JFBTW:1:1113:5750:11729_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ6*03 F 224 85.25 52/61 nt Homsap IGHD3-10*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARESVGSYYMDVW in-frame + gcttctggaggcgccttcagcagctatgcttttacctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacaacaaactacgcacagaagttccagggcagagtcacggttaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaatcggtcgggtcctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1048 1047 M01495:47:000000000-JFBTW:1:1113:23394:12349_1:N: productive Homsap IGHV3-7*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-16*01 F 2 8 8 9 8.8.9 [3.17.38.11] CARDSPFFDYW in-frame + tgcagcctctggattcacctttagtaactattggatgagttgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctatgtattactgtgcgagagattctcctttctttgactactggggccagggaaccctggtcaccgtcttctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1049 1048 M01495:47:000000000-JFBTW:1:1113:26367:12399_1:N: productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-22*01 F 2 8 7 19 8.7.19 [3.17.38.11] CASINSDSSGYYYAGYAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagcatcaactccgatagtagtggttattactacgcggggtatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1050 1049 M01495:47:000000000-JFBTW:1:1113:4711:12547_1:N:0 productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1074 98.20 218/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-3*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARHYTIFGVVILDYW in-frame + aaggcttctggatacagctttaccagatactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattatacgatttttggagtggttattcttgactactgggcccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1051 1050 M01495:47:000000000-JFBTW:1:1113:9018:13660_1:N:0 productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*01 F 3 8 8 14 8.8.14 [2.17.38.11] CAKDLRGVVPAACDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtatattactgtgcgaaagatctccgtggggtagtaccagctgcttgcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1052 1051 M01495:47:000000000-JFBTW:1:1113:2469:13683_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD6-25*01 F 3 8 7 16 8.7.16 [3.17.38.11] CAREQSERIRYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaacaatcggagcgcattcgttactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1053 1052 M01495:47:000000000-JFBTW:1:1113:26213:13895_1:N: productive Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARKSYDSSGSYSRPHDSW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaattgggtccgccaggctccagggaaggggctggagtgggtttcatacatcagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcgccatctccagagacaacgccaagaactcactgtttctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaaagtcatatgatagtagtggttcttactctcggccccatgactcgtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1054 1053 M01495:47:000000000-JFBTW:1:1113:18547:13926_1:N: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 771 93.68 163/174 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 X 10 14 X.10.14 [X.10.38.11] CTSRRDWYDSNGYDYW in-frame + ccagggaaggggctggagtgggttggcctaattaaaagtaaagctgatggtgggacaacggtctacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacactatatctgcaaatgaacagcctgagaaccgaggatacagccgtgtattactgcacctccaggcgggattggtatgatagtaatggttatgattattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 280 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1055 1054 M01495:47:000000000-JFBTW:1:1113:12310:14070_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARLGGIAAAGMGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactggggggtatagcagcagctggtatgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatacccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1056 1055 M01495:47:000000000-JFBTW:1:1113:26248:14117_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-13*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARAADSSSWYVLDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagccgcagatagcagcagctggtacgtccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1057 1056 M01495:47:000000000-JFBTW:1:1113:26103:15009_1:N: productive Homsap IGHV3-48*03 F 998 94.17 210/223 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-15*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARGSGDNWFDPW in-frame + tgtagcctctggattcaccttcagtagttatgaaatgaattgggtccgccaggctccagggaaggggctagagtgggtttcatacatcagtggttatggtacttccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaataactcactgtatctgcaaatgaacagtctgagagccgaggacacggccgtgtattactgtgcgagaggtagtggtgacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttttccccctcgtctcctgtgagaattccccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1058 1057 M01495:47:000000000-JFBTW:1:1113:19661:16844_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-11*01 ORF 2 8 8 13 8.8.13 [3.17.38.11] CARRDSNLHYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggacagtaacctccattactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1059 1058 M01495:47:000000000-JFBTW:1:1113:29033:16888_1:N: productive Homsap IGHV4-59*12 (F) 1091 99.55 219/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 1 8 7 16 8.7.16 [3.17.38.11] CARVGGGALSSSSNFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagtgggagggggagccctgagcagcagctcgaactttgactactggggcccgggcgccctggtcaccgtctcctcagggagtgcatccgcccccacccttttccccctcgtctcctgtgggccttcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1060 1059 M01495:47:000000000-JFBTW:1:1113:23125:17224_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-8*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARDIVLMVRAWFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatattgtactaatggtgcgtgcctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1061 1060 M01495:47:000000000-JFBTW:1:1113:8959:17656_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD1-26*01 F 3 8 8 19 8.8.19 [3.17.38.11] CAKDSYSGSYYVDEGFAFDIW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctgggtccgccaggctccagggaaggggccggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagactcgtatagtgggagctactacgtcgatgaagggtttgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1062 1061 M01495:47:000000000-JFBTW:1:1113:14855:18095_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-12*01 F 3 8 8 12 8.8.12 [3.17.38.11] CAARSSGYDYIDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcggcccgatctagcggctacgattacatagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1063 1062 M01495:47:000000000-JFBTW:1:1113:9945:19254_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 696 96.00 144/150 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-24*01 ORF 3 X 8 14 X.8.14 [X.4.38.11] CARGYRDGYKMGFDYW in-frame + atatcgcgagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggctatcgggatggctacaaaatggggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 256 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1064 1063 M01495:47:000000000-JFBTW:1:1113:20061:20109_1:N: unproductive (see comment) Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-21*01 F 2 8 8 9 8.8.9 [3.17.38.11] CAR*FAGLDYW in-frame + rearranged sequence, stop codons tgcagccgctggattcaccttcagtagttatgcaatgaactgggtccgccaggctccagggaaggggctggagtggctttcatacattactcctagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagatagttcgctgggcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1065 1064 M01495:47:000000000-JFBTW:1:1113:9235:20785_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-19*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARQAVAGHYFDYW in-frame + aagggttctggatacagttttaccacctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctggcaccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaagcagtggctgggcactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1066 1065 M01495:47:000000000-JFBTW:1:1113:18782:21884_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ6*02 F (see comment) 175 75.81 47/62 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARYSSGWPQALMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) aagggctctggatacagctttaccagctactcgagcggctgggtgcgccagatgcccgggacaggcctggagtggatggggatcatctatcctggttactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggtatagcagtggctggcctcaagcgcttatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1067 1066 M01495:47:000000000-JFBTW:1:1112:11233:5809_1:N:0 productive Homsap IGHV4-61*01 F 1040 95.58 216/226 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-24*01 ORF 3 10 7 9 10.7.9 [3.17.38.11] CARGREGEDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggagagaaggtgaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1068 1067 M01495:47:000000000-JFBTW:1:1112:3712:6360_1:N:0: productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 1 8 8 14 8.8.14 [2.17.38.11] CATGVVGATELLFDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaggtgtggtgggagctaccgagttgttgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1069 1068 M01495:47:000000000-JFBTW:1:1112:17971:6382_1:N:0 productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD4-23*01 ORF 2 8 8 16 8.8.16 [2.17.38.11] CAREGTYGGKVGNWFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaggggacttacggtggtaaagtcgggaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1070 1069 M01495:47:000000000-JFBTW:1:1112:19784:7613_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD5-12*01 F 3 8 7 24 8.7.24 [3.17.38.11] CAREYSGYDSVEAQGVYYYYYGMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagaatatagtggctacgattcggtggaagcccaaggggtttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1071 1070 M01495:47:000000000-JFBTW:1:1112:9651:8283_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-16*01 F 2 8 8 16 8.8.16 [2.17.38.11] CATDPLRRSYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagatcctcttcggaggagctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1072 1071 M01495:47:000000000-JFBTW:1:1112:21524:8951_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARERGIQLYDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaaagagggatacagctatatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1073 1072 M01495:47:000000000-JFBTW:1:1112:2614:9579_1:N:0: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1037 96.82 213/220 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 201 88.24 45/51 nt Homsap IGHD6-13*01 F 1 8 7 10 8.7.10 [3.17.38.11] CAEGRSSWYVYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgccgagggtcgcagcagctggtacgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1074 1073 M01495:47:000000000-JFBTW:1:1112:2479:9755_1:N:0: productive Homsap IGHV1-18*01 F 1014 95.89 210/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [2.17.38.11] CATDEDYYDDAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagatgaggattactatgatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1075 1074 M01495:47:000000000-JFBTW:1:1112:2991:10961_1:N:0 productive Homsap IGHV3-48*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F (see comment) 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDKDASSGYYLGAIDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcaccttcagtgattatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccaaatactacgcagactctgtgaagggccgattcaccgtctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctctttattattgtgcgagagataaggatgctagtagtggttattacctaggagccattgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1076 1075 M01495:47:000000000-JFBTW:1:1112:18992:11108_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1073 98.64 217/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-23*01 ORF 2 8 7 13 8.7.13 [3.17.38.11] CARSYGGNAREVEYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagttaccatatcagtagacgcgtccaagaaccagttctccctgaagctgggctctgtgaccgctgcggacacggccgtgtattactgtgctcggagctacggtggtaacgcccgagaggttgaatactggggccagggaaccctggtcaccgtctccccagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1077 1076 M01495:47:000000000-JFBTW:1:1112:17523:12338_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARDGYYYDSSGYYYSLDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgggtattactatgatagtagtggttattactacagccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1078 1077 M01495:47:000000000-JFBTW:1:1112:19728:12708_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD4-11*01 ORF 3 8 8 19 8.8.19 [2.17.38.11] CARERPPTVTTEGSYNWFDPW in-frame + gcttctggaggcaccttcagtagctatcctatcagctgggtgcgacaggcccctggacaagggcttgattggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagagaccccctacagtgactacagaggggagctacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1079 1078 M01495:47:000000000-JFBTW:1:1112:24932:13626_1:N: unproductive (see comment) Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 967 94.42 203/215 nt 93.95 202/215 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD3-3*01 F 2 8 8 X 8.8.X [0.17.38.11] CARRITIFGVVFNFG#YYGMDVW out-of-frame + rearranged sequence, stop codons in CDR2-IMGT at codon 57 of V-REGION: 'T' (1 nucleotides at position 83 to 83 in the user submitted sequence), (cause frameshift); ctggatacacctttaccacctaatatatagactgggagcgacaggcccctggacaagggcttgagtggatgggaataatcaaTccctagtggtggtagcacaggctacgtacagaagctccagggcagagtcaccatgaccagggacacgtccacgaccacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtcttagtgtgcgagacgaattacgatttttggagtggttttcaattttggatatattacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1080 1079 M01495:47:000000000-JFBTW:1:1112:28296:14677_1:N: productive Homsap IGHV3-48*03 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARKLIAVRALDYW in-frame + tgtcgcctctggattcaccttcagtagttatgaaatgacctgggtccgccaggctccagggaaggggctggagtgggtttcatacattgatagtagtggtactatcatgtactacgcagactctgtgaagggccgattcaccctctccagagacaacgccaaagactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttatttctgtgcgagaaaacttatagcagttcgtgcccttgactactggggccagggaactctggttaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1081 1080 M01495:47:000000000-JFBTW:1:1112:24211:15210_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARSSSSWYDYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggtctagcagcagctggtacgattactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1082 1081 M01495:47:000000000-JFBTW:1:1112:22459:16144_1:N: productive Homsap IGHV1-2*04 F 1005 95.43 209/219 nt Homsap IGHJ3*02 F (see comment) 214 92.00 46/50 nt Homsap IGHD6-6*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARAPRWSEDAFDIW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagctccccgctggtccgaggatgcttttgatatctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1083 1082 M01495:47:000000000-JFBTW:1:1112:6274:16528_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 960 93.15 204/219 nt Homsap IGHJ5*02 F (see comment) 156 78.43 40/51 nt Homsap IGHD3-9*01 F 2 8 8 8 8.8.8 [2.17.38.11] CARGPGLGVW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttcgtacaccaaactacgcacagaggttccagggcagagtcacgattagcgcggacgaatccacgaccacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccctggtttgggggtctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1084 1083 M01495:47:000000000-JFBTW:1:1112:25504:16633_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARLGLGSGYSFFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagattcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgggcctcggtagtggttattccttttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1085 1084 M01495:47:000000000-JFBTW:1:1112:25758:16634_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD5-12*01 F 1 8 8 11 8.8.11 [2.17.38.11] CARGRMDNWFDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggcaggatggataactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1086 1085 M01495:47:000000000-JFBTW:1:1112:19875:17173_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F or Homsap IGHV4-34*08 F 687 95.33 143/150 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD4-17*01 F 2 X 7 15 X.7.15 [X.5.38.11] CARGARSLGDYGYFDYW in-frame + atatcgcgaggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgcgagatctcttggtgactacggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 259 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1087 1086 M01495:47:000000000-JFBTW:1:1112:8686:17341_1:N:0 unproductive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*01 F 2 8 8 X 8.8.X [2.17.38.11] CARGEYQLWSTA#DYW out-of-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggagtaccagctatggtctacggctggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1088 1087 M01495:47:000000000-JFBTW:1:1112:17893:17558_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-6*01 F 1 8 7 12 8.7.12 [3.17.38.11] CARTYSSSSHFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaacatatagcagctcgtctcactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1089 1088 M01495:47:000000000-JFBTW:1:1112:19131:18034_1:N: productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARTYGDYERYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggaatgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaacctacggtgactacgaacgatactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1090 1089 M01495:47:000000000-JFBTW:1:1112:16041:18256_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 696 96.00 144/150 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD3-10*01 F 3 X 8 16 X.8.16 [X.4.38.11] CARSGRMVRRVSYGMDVW in-frame + atatcgcgagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatccggccgtatggttcgtagagtctcctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 262 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1091 1090 M01495:47:000000000-JFBTW:1:1112:7666:18283_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 8 8 17 8.8.17 [3.17.38.11] CAKVGTTITTYYYHYMDVW in-frame + tgcagcctctggattcacctttaacagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccgcttaaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggggactacaataactacgtactactatcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1092 1091 M01495:47:000000000-JFBTW:1:1112:14787:18842_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARDGLEDSSGYDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatgggctagaggatagtagtggttacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1093 1092 M01495:47:000000000-JFBTW:1:1112:21848:19032_1:N: productive Homsap IGHV4-38-2*02 F, or Homsap IGHV4-39*07 F (see comment) 1064 98.18 216/220 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD6-13*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARAGRGSSSWYLFDPW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR1-IMGT amino acid lengths (8 AA in M01495:47:000000000-JFBTW:1:1112:21848:19032_1:N:; 9 AA in Homsap IGHV4-38-2*02): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagccggacgcgggagcagcagctggtacctgttcgacccttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1094 1093 M01495:47:000000000-JFBTW:1:1112:20362:19560_1:N: productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1097 99.10 221/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-3*01 F 2 9 7 9 9.7.9 [3.17.38.11] CARDWNAFDIW in-frame + cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattggaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1095 1094 M01495:47:000000000-JFBTW:1:1112:17154:21672_1:N: productive Homsap IGHV1-24*01 F 942 92.24 202/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [2.17.38.11] CATERGMGSSGWYEDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagagagggggatgggtagcagtggctggtacgaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 358 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1096 1095 M01495:47:000000000-JFBTW:1:1112:12099:21754_1:N: unproductive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-16*01 F 3 8 7 X 8.7.X [3.17.38.11] CARVGYFYDYVWGTG#DYW out-of-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtagggtatttctatgattacgtttgggggacgggcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1097 1096 M01495:47:000000000-JFBTW:1:1112:11809:21937_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1025 95.52 213/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD7-27*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARDLLDGADYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatattacgcagactcagtgaagggccgattcaccacctccagagacaattccaagaacacgttgtctctgcagatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatctgctagatggggcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1098 1097 M01495:47:000000000-JFBTW:1:1111:18631:4333_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 1 8 8 7 8.8.7 [2.17.38.11] CAIISPDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgataatatccccggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1099 1098 M01495:47:000000000-JFBTW:1:1111:14518:6012_1:N:0 productive Homsap IGHV1-2*04 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARRLSSGYYGSW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagacggcttagtagtggttattatgggtcttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1100 1099 M01495:47:000000000-JFBTW:1:1111:6049:6362_1:N:0: productive Homsap IGHV3-48*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD7-27*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARATMSGEGYW in-frame + tgcagcctctggattcaccttcagtagttatgaactgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtgataccaaatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactctctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagcgactatgtcgggggagggctactggggccagggaaccctggtcaccgtctcctccgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1101 1100 M01495:47:000000000-JFBTW:1:1111:16594:6855_1:N:0 productive Homsap IGHV3-9*02 F 1016 95.07 212/223 nt Homsap IGHJ6*02 F (see comment) 163 76.79 43/56 nt Homsap IGHD2-15*01 F 2 8 8 11 8.8.11 [3.17.38.11] CAKDISPGGADVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctctaatgattatgccatgcactgggtccggcaagttccagggaagggcctggagtgggtcggaggtatttactggaatagtggtaggataggatatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactctctgtatttgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatattagtcctggcggtgcggacgtctggggccaagggaccacggtcatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1102 1101 M01495:47:000000000-JFBTW:1:1111:25501:7118_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F (see comment) 202 80.65 50/62 nt Homsap IGHD5-12*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARDHVGIVYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcatgtgggtatagtttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1103 1102 M01495:47:000000000-JFBTW:1:1111:17079:8760_1:N:0 productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1150 100.00 230/230 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-17*01 F 2 10 9 13 10.9.13 [2.17.38.11] CARGLPYGDYAFDYW in-frame + ccatctccggggacagtgtctctagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagaggcctcccctacggtgactacgcgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1104 1103 M01495:47:000000000-JFBTW:1:1111:23439:9110_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1105 1104 M01495:47:000000000-JFBTW:1:1111:9224:9798_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD6-19*01 F 2 8 8 22 8.8.22 [3.17.38.11] CAKDEGIAVAGRGTRNYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatgagggtatagcagtggctggtagggggacccgaaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1106 1105 M01495:47:000000000-JFBTW:1:1111:5576:10155_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 10 8.8.10 [3.17.38.11] CAREGYYYFDHW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagaaggatactactactttgaccactggggccagggaaccctggtcaccgcctcctcatggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1107 1106 M01495:47:000000000-JFBTW:1:1111:26962:10701_1:N: productive Homsap IGHV3-11*01 F 1106 99.55 222/223 nt Homsap IGHJ5*02 F 136 76.60 36/47 nt Homsap IGHD5-18*01 F 1 8 8 6 8.8.6 [3.17.38.11] CASPVVAL in-frame + TRP 118 not identified tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacgtccgtgtattactgtgcgagtcctgtggtggcgttgggccagggaaccctggtcaccgtctcctcagggagtgcatccgcccaaacccttttcccccacgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1108 1107 M01495:47:000000000-JFBTW:1:1111:18606:11470_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD1-26*01 F 3 8 8 21 8.8.21 [3.17.38.11] CARLKEGRGSYWAGWGFDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcaaggagggtcgtgggagctactgggccggttgggggtttgatgcttttgatatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1109 1108 M01495:47:000000000-JFBTW:1:1111:22543:11606_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [2.17.38.11] CASWGRYYDSSGYYNFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagctggggacgttactatgatagtagtggttattacaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1110 1109 M01495:47:000000000-JFBTW:1:1111:17290:12906_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD4-17*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARDDPVTNPKFIYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcatagcctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagagatgatccggtgactaaccccaagttcatctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1111 1110 M01495:47:000000000-JFBTW:1:1111:4089:14087_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-2*01 F 3 8 8 25 8.8.25 [3.17.38.11] CARNSAFSRATLLQSVVVLPYDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaaattctgcgttttcccgcgcgacattacttcaatcagtagtagtgttaccttatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 392 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1112 1111 M01495:47:000000000-JFBTW:1:1111:22900:14124_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD5-18*01 F 1 8 7 11 8.7.11 [3.17.38.11] CAREGAMVYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaggggctatggtctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1113 1112 M01495:47:000000000-JFBTW:1:1111:2370:14802_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [2.17.38.11] CAEGSYDSSGYHFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggaaggaagctatgatagtagtggttaccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1114 1113 M01495:47:000000000-JFBTW:1:1111:27595:14956_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARDEGEFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgagggggaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1115 1114 M01495:47:000000000-JFBTW:1:1111:16904:15551_1:N: productive Homsap IGHV1-8*01 F 1005 100.00 201/201 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 2 4 8 19 4.8.19 [X.17.38.11] CARWTTSNFWSGYHYYGMDVW in-frame + accagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatggaccacctcgaatttttggagtggttatcactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 322 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1116 1115 M01495:47:000000000-JFBTW:1:1111:22460:16085_1:N: productive Homsap IGHV1-8*01 F 1068 98.63 216/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-10*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARVLSMVRGVMRNAFDIW in-frame + gcttctggatacaccttcaccagttatgagatcaactgggtgcggcaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaggttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtcctgtcgatggttcggggagttatgagaaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1117 1116 M01495:47:000000000-JFBTW:1:1111:28321:16523_1:N: productive Homsap IGHV4-61*01 F 1121 99.56 225/226 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-22*01 F 1 10 7 14 10.7.14 [3.17.38.11] CAREWLLDYYYYMDVW in-frame + cactgtccctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagggagtggttattggactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1118 1117 M01495:47:000000000-JFBTW:1:1111:15767:17789_1:N: productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ1*01 F (see comment) 179 82.69 43/52 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAKMAAGYYYDSSGYYEHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaaatggccgccggctattactatgatagtagtggttattacgaacactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1119 1118 M01495:47:000000000-JFBTW:1:1111:27127:18022_1:N: unproductive (see comment) Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-13*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDWKIRATAGTQTFSYW in-frame + rearranged sequence, stop codons tgcagcgtctggattcaccttcagtagctatggcatgcactgggtcccccacgccccaggctaggggccggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagattggaagattagagcaacagctggtactcaaacattcagctactggggccagggaaccctggtaaccgtctcctcagggggcgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1120 1119 M01495:47:000000000-JFBTW:1:1111:7295:18090_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD1-26*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAKGPALGIAGWFDPW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggtccagctctggggatcgcgggatggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1121 1120 M01495:47:000000000-JFBTW:1:1111:24716:19466_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [2.17.38.11] CAKGTIVGATVDYW in-frame + gcttctggatacaccttcactagctatgctatgaattgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaaagggactatagtgggagctaccgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1122 1121 M01495:47:000000000-JFBTW:1:1111:10450:20076_1:N: productive Homsap IGHV1-8*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDHCSGGSCYSFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatcattgtagtggtggtagctgctactcgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1123 1122 M01495:47:000000000-JFBTW:1:1111:10380:20841_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 209 91.84 45/49 nt Homsap IGHD2-2*01 F 3 8 7 8 8.7.8 [3.17.38.11] CARGPDMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcgaacacggctgtgtattactgtgcgagaggcccagacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1124 1123 M01495:47:000000000-JFBTW:1:1111:7571:20955_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-15*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARVGHCSGGSCLRSEGWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagtggggcattgtagtggtggtagctgcttaagatccgagggttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1125 1124 M01495:47:000000000-JFBTW:1:1111:17900:21593_1:N: unproductive (see comment) Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F (see comment) 1086 99.54 218/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-21*02 F 3 8 8 X 8.8.X [2.17.38.11] WAGGDCCGPHGS#FDYW out-of-frame + rearranged sequence, stop codons 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgggctggtggtgactgctgcgggccccacgggtctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1126 1125 M01495:47:000000000-JFBTW:1:1111:17643:21916_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1061 97.31 217/223 nt Homsap IGHJ6*03 F 233 86.89 53/61 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARDLSPYYYMDVW in-frame + tgcagcctctgggttcacctttagcagctatgccatgaactgggtccgccgggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagacctgtctccctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1127 1126 M01495:47:000000000-JFBTW:1:1109:10885:4630_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F (see comment) 202 80.65 50/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARRGSGCSSTSCYETADGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgagggtcgggctgtagtagtaccagctgctatgaaacggctgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1128 1127 M01495:47:000000000-JFBTW:1:1109:17635:4873_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 193 79.03 49/62 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARRNGNYYDSSGYFMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgtaacggaaattactatgatagtagtggttatttcatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1129 1128 M01495:47:000000000-JFBTW:1:1109:8480:5974_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 879 97.81 179/183 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 X 8 17 X.8.17 [X.15.38.11] CAKVGTTITTYYYHYMDVW in-frame + tgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccgcttaaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggggactacaataactacgtactactatcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 298 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1130 1129 M01495:47:000000000-JFBTW:1:1109:5895:7447_1:N:0: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1068 98.63 216/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARARGDSVVPAAPDAFDIW in-frame + gcatctggatacaccttcactagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggaagagtcaccatgaccagggacacgtccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggcccggggggactcagtagtaccagctgctcctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1131 1130 M01495:47:000000000-JFBTW:1:1109:12752:7829_1:N:0 productive Homsap IGHV4-59*12 (F) 1100 100.00 220/220 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-22*01 F 2 8 7 20 8.7.20 [3.17.38.11] CARVQNYYDSSGYYRRGAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagtgcaaaattactatgatagtagtggttattacaggcgcggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1132 1131 M01495:47:000000000-JFBTW:1:1109:9767:9562_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD7-27*01 F 3 8 8 8 8.8.8 [3.17.38.11] CVKGDWGDYW in-frame + tgcagcctctgggttcacctttagcgactatgccatgaactgggtccgccaggctccagggcaggggctggagtgggtctcacttattagtgacaatggtggtaacacatactacgcagactccgtgaagggccggttcaccatctccagagacagctccaagaacacactgtatctgcaaatgaacagcctgagagtcgaggacacggccgtatattactgtgtgaaaggggactggggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1133 1132 M01495:47:000000000-JFBTW:1:1109:7275:9849_1:N:0: productive (see comment) Homsap IGHV1-3*02 F, or Homsap IGHV1-3*03 F 705 100.00 141/141 nt 99.29 140/141 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD4-11*01 ORF 2 8 X 13 8.X.13 [2.3.34.11] CARALDYSTYGMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 42 of V-REGION: 78 nucleotides (from position 40 in the user submitted sequence), (do not cause frameshift) gcttctggatacaccttcactagctatgctatgcattgggagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaggacatggctgtgtattactgtgcgagagctctcgactacagtacttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 275 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1134 1133 M01495:47:000000000-JFBTW:1:1109:5959:10757_1:N:0 productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-1*01 F 1 9 7 8 9.7.8 [3.17.38.11] CARSATGDYW in-frame + cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaagtgccactggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1135 1134 M01495:47:000000000-JFBTW:1:1109:6465:11665_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 165 80.39 41/51 nt Homsap IGHD1-7*01 F 1 8 8 11 8.8.11 [2.17.38.11] CARGGITALPDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcggaattacggcccttcccgacccctggggccagggaaccctggtcaccatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1136 1135 M01495:47:000000000-JFBTW:1:1109:9703:11986_1:N:0 productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-21*02 F 2 8 8 15 8.8.15 [2.17.38.11] CARGARDCGGDCYSDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggagcgagggattgtggtggtgactgctactcagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1137 1136 M01495:47:000000000-JFBTW:1:1109:16566:12259_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 1034 95.96 214/223 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAREGVYCSGGSCYLAAFDIW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccaggggaggggctggtgtgggtctcacgtattaagagtgatgagagtagtataaggtatgcggactccgtgaagggccgattcaccatctccagagacaacggcaagaacacggtgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagagggggtatattgtagtggtggtagctgttacctggccgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1138 1137 M01495:47:000000000-JFBTW:1:1109:15108:12328_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARDTVVPAAMGFLIVPSLDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatacagtagtaccagctgctatgggttttctgatagtaccttcgcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaattcccctcgcgatat 0 0 373 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1139 1138 M01495:47:000000000-JFBTW:1:1109:14781:12385_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-1*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARGAHWNDFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaacacgctgtatttgcaaatgaacagtctgagagccgaggacacggctgtatattactgtgcaagaggcgcccactggaacgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1140 1139 M01495:47:000000000-JFBTW:1:1109:15688:13746_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1011 95.05 211/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARQGYYYGSGSYDDYW in-frame + aggacttctggatacagctttaccactaactggatcgcctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggttcctctgataccaagtacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaagggtattactatggttcggggagttatgacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1141 1140 M01495:47:000000000-JFBTW:1:1109:15042:14179_1:N: productive (see comment) Homsap IGHV1-3*01 F, or Homsap IGHV1-3*04 (F) or Homsap IGHV1-3*05 F 735 100.00 147/147 nt 99.32 146/147 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-17*01 F 2 8 X 14 8.X.14 [2.15.24.11] CARDPGDYTLYYFDYW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 54 of V-REGION: 72 nucleotides (from position 76 in the user submitted sequence), (do not cause frameshift) gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatccaggtgactacactctttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 284 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1142 1141 M01495:47:000000000-JFBTW:1:1109:9082:14958_1:N:0 productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggaatgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1143 1142 M01495:47:000000000-JFBTW:1:1109:21960:16447_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1055 97.73 215/220 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD3-3*01 F 1 8 7 17 8.7.17 [3.17.38.11] CVGHVLRFLEWLPDRMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgttggccatgtattacgatttttggagtggttacccgaccgtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1144 1143 M01495:47:000000000-JFBTW:1:1109:12359:16805_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARLQYSGSYWVGAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactccaatatagtgggagctactgggtaggggcttttgatatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1145 1144 M01495:47:000000000-JFBTW:1:1109:18872:17260_1:N: productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-9*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARGDYDILTGYYDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaggggattacgatattttgactggttactacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1146 1145 M01495:47:000000000-JFBTW:1:1109:18526:17353_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARTVRQWFGDPRDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggctgtgtattactgtgcgaggacggttagacaatggttcggggaccctcgagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1147 1146 M01495:47:000000000-JFBTW:1:1109:18127:17444_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt 8 8 8 8.8.8 [3.17.38.11] CARAPYYDYW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagccccctactacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1148 1147 M01495:47:000000000-JFBTW:1:1109:17004:17511_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 8 17 8.8.17 [3.17.38.11] CTKVNGRRAVTGTGCSDYW in-frame + tacagcctctggattcagttttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtgatagtggtggtagcacatactatgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacactctgtatctgctaatgaacagtctgagagccgaggacacggccgtgtattactgtacgaaagttaacgggcgaagagcagtaactggtacggggtgttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1149 1148 M01495:47:000000000-JFBTW:1:1109:10968:17543_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARRPGHGTMVRGVYYDEW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacgccctggccacggtactatggttcgtggagtatattacgacgaatggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1150 1149 M01495:47:000000000-JFBTW:1:1109:27276:17575_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD6-13*01 F 1 8 8 23 8.8.23 [3.17.38.11] CARLGGGKSSSWPARYYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctgatgactctgatatcaaatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttggcggtggtaaaagcagcagctggcccgcccgatactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaaccctttaccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1151 1150 M01495:47:000000000-JFBTW:1:1109:23516:17648_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-15*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARGSPHNWFDPW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggctctccgcacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1152 1151 M01495:47:000000000-JFBTW:1:1109:7144:18138_1:N:0 productive Homsap IGHV4-61*05 F (see comment) 1061 97.31 217/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 2 9 7 13 9.7.13 [3.17.38.11] CARGGRRSGPFGSYW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR1-IMGT amino acid lengths (9 AA in M01495:47:000000000-JFBTW:1:1109:7144:18138_1:N:0; 10 AA in Homsap IGHV4-61*05): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggaggtaggcggagtgggcccttcgggtcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1153 1152 M01495:47:000000000-JFBTW:1:1109:10233:20409_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD3-16*01 F 2 8 8 17 8.8.17 [2.17.38.11] CASSSYLVYYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagctcctcgtatttggtttattactactactactacggtatggacgtctggggccaagggaccacggtcaccatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1154 1153 M01495:47:000000000-JFBTW:1:1109:17302:20527_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD5-24*01 ORF 2 8 8 11 8.8.11 [3.17.38.11] CARRQHGYAFDIW in-frame + aagggttctggatacagctttgtcgactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggcaacacggttatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1155 1154 M01495:47:000000000-JFBTW:1:1109:9883:20532_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKGTAAGRYRRNGTDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggacggcagctggtaggtatcgccgcaacgggactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1156 1155 M01495:47:000000000-JFBTW:1:1109:25470:20901_1:N: productive Homsap IGHV3-21*07 (F), or Homsap IGHV3-23*01 F or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 998 94.17 210/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccaggggaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1157 1156 M01495:47:000000000-JFBTW:1:1109:26181:21815_1:N: productive Homsap IGHV3-49*04 F 1145 100.00 229/229 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-6*01 F 1 8 10 9 8.10.9 [3.17.38.11] CTRASPSFDYW in-frame + tacagcttctggattcacctttggtgattatgctatgagctgggtccgccaggctccagggaaggggctggagtgggtaggtttcattagaagcaaagcttatggtgggacaacagaatacgccgcgtctgtgaaaggcagattcaccatctcaagagatgattccaaaagcatcgcctatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtactagagcttcgccctcttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1158 1157 M01495:47:000000000-JFBTW:1:1109:16947:21895_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1028 96.36 212/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARSVGCSGGSCHTDYW in-frame + cactgtctctggtggctccatcaatacttactattggaactggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgagcttgacctctgtgaccgctgcggacacggccgtgtattactgtgcgagaagcgtcgggtgtagtggtggtagctgccacactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1159 1158 M01495:47:000000000-JFBTW:1:1107:12305:4366_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 175 88.64 39/44 nt Homsap IGHD5-18*01 F 1 8 8 6 8.8.6 [2.17.38.11] CARDVTDW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgttaccgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 332 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1160 1159 M01495:47:000000000-JFBTW:1:1107:8695:5185_1:N:0: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARAVAGNSVDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcagtggctggtaattcggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1161 1160 M01495:47:000000000-JFBTW:1:1107:5537:5219_1:N:0: productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-25*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARLESGANDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagacttgagtcaggggctaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1162 1161 M01495:47:000000000-JFBTW:1:1107:6965:5395_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-26*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAKCRVGATIGATHYW in-frame + tgcagcctctggattcacctttagcagctctgccatgagctgggtcggccaggctccagggaaggggctggagtgtgtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttaaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatgtcgagtgggagctaccattggggccacgcactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1163 1162 M01495:47:000000000-JFBTW:1:1107:9742:5529_1:N:0: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-8*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARVPYSTKYYYYYMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagttccatattctacaaagtactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1164 1163 M01495:47:000000000-JFBTW:1:1107:22737:6812_1:N:0 productive Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-14*01 ORF 2 8 8 11 8.8.11 [3.17.38.11] CARDSADQPFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacgttagtggtcctgcttttaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagattcggcggaccaaccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1165 1164 M01495:47:000000000-JFBTW:1:1107:25820:6964_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1050 97.72 214/219 nt Homsap IGHJ6*02 F 206 81.97 50/61 nt Homsap IGHD6-13*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARDRGSSSGMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgaggcagcagctcaggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1166 1165 M01495:47:000000000-JFBTW:1:1107:7962:7597_1:N:0: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 2 8 7 13 8.7.13 [3.17.38.11] CARGRYGGKNTYGYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgctacggtggtaagaatacgtatggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1167 1166 M01495:47:000000000-JFBTW:1:1107:27691:7949_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARSAYYYGSGSTYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggtcggcgtattactatggttcggggagtacgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1168 1167 M01495:47:000000000-JFBTW:1:1107:18814:8200_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 998 94.17 210/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD7-27*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKDLANWGLEDFGYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagttccagggaagggcctggagtgggtctcaggtattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatctcgctaactggggattagaggactttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1169 1168 M01495:47:000000000-JFBTW:1:1107:22580:8916_1:N:0 productive Homsap IGHV3-33*08 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARDYYGSGSQYYFDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatattatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctctgtattactgtgcgagagattactatggttcggggagtcaatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1170 1169 M01495:47:000000000-JFBTW:1:1107:8812:8985_1:N:0: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARAPRLPAANNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagccccccgcctgccagctgctaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1171 1170 M01495:47:000000000-JFBTW:1:1107:20856:9032_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 996 94.98 208/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDGCTTCSAYYGVDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatggctgtaccacctgctctgcctactacggtgtggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccttgagaattcccctcgcgatat 0 0 361 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1172 1171 M01495:47:000000000-JFBTW:1:1107:5764:9451_1:N:0: No rearrangement found Homsap IGHV4-34*03 F 1086 99.54 218/219 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 286 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1173 1172 M01495:47:000000000-JFBTW:1:1107:7748:9518_1:N:0: productive Homsap IGHV3-11*06 F 962 92.38 206/223 nt Homsap IGHJ6*04 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-3*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARDLDSLGRMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatctcgattcgttgggtcgcatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1174 1173 M01495:47:000000000-JFBTW:1:1107:3906:9801_1:N:0: No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgcctgatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggacactatggttcggggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 305 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1175 1174 M01495:47:000000000-JFBTW:1:1107:8227:10451_1:N:0 unproductive (see comment) Homsap IGHV1-8*01 F 1055 100.00 211/211 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-2*01 F 3 7 8 X 7.8.X [X.17.38.11] CARVPPSIKL**YQLLS#W out-of-frame + rearranged sequence, stop codons atacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtgcccccatcaatcaaattgtagtagtaccagctgctatcgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 325 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1176 1175 M01495:47:000000000-JFBTW:1:1107:14328:10546_1:N: unproductive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 2 8 8 X 8.8.X [3.17.38.11] CARDANTVVTQ#LYYW out-of-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgcgaatacggtggtaactcagccttgtactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1177 1176 M01495:47:000000000-JFBTW:1:1107:23226:10730_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD1-26*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARGGGGVGAPYWYFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtggtggaggagtgggagctccctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1178 1177 M01495:47:000000000-JFBTW:1:1107:17503:10848_1:N: productive Homsap IGHV1-18*01 F 1014 95.89 210/219 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD2-21*02 F 2 8 8 14 8.8.14 [2.17.38.11] CARAGDQRLEWYFDLW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaggtatgcacggaacctccagggcagagtcaccatgaccacagacacatccacgagcactgcctacatggagctgcggagcctcagatctgacgacacggccatatattactgtgcgagagcgggtgaccaacgtctcgagtggtacttcgatctctggggccgtggcacccaggtcactgtctcctcagggagtgcatccgccccaaccctttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1179 1178 M01495:47:000000000-JFBTW:1:1107:14426:11152_1:N: productive Homsap IGHV1-8*02 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARGAGYYDSSGYGYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtagcacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgcaggttactatgatagtagtggttatggttactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1180 1179 M01495:47:000000000-JFBTW:1:1107:25805:11845_1:N: unproductive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1041 97.26 213/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-19*01 F 3 8 8 X 8.8.X [2.17.38.11] CARVIASYSSGWY#WFDPW out-of-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcaggctgagatctgaggacacggccgtgtattactgtgcgagagtgatagcctcgtatagcagtggctggtattctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1181 1180 M01495:47:000000000-JFBTW:1:1107:29344:12134_1:N: productive Homsap IGHV3-30*07 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-10*01 F 2 8 8 8 8.8.8 [3.17.38.11] CARSASFDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacactgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagatcggcgtcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1182 1181 M01495:47:000000000-JFBTW:1:1107:11886:12184_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtggtagtggtggtaccacacactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1183 1182 M01495:47:000000000-JFBTW:1:1107:15882:12604_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F (see comment) 210 90.20 46/51 nt Homsap IGHD5-12*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKDGRWGGYEFDPW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatggtcggtggggtggctacgagtttgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1184 1183 M01495:47:000000000-JFBTW:1:1107:21333:13085_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F 192 86.27 44/51 nt Homsap IGHD2-2*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARDLRVSSTEASGLDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtaaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatctgagggttagtagtaccgaggctagtggtctcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1185 1184 M01495:47:000000000-JFBTW:1:1107:9878:13566_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARDRAVAPVDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcgagcagtggctcctgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1186 1185 M01495:47:000000000-JFBTW:1:1107:27248:14073_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARVEGDDFWSRYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtggagggcgacgatttttggagcagatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgataattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1187 1186 M01495:47:000000000-JFBTW:1:1107:7942:14217_1:N:0 productive Homsap IGHV3-11*06 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGSVGDSGSWTEW in-frame + tgcagcctctggattcaccttcaatgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtggtagtgctagttacacaaactacgcagactctgtgaagggccgattcaccgtctccagagacaacgccaagaactcactttttctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggggatccgtcggggacagtgggagctggacagaatggggccagggaacccaggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1188 1187 M01495:47:000000000-JFBTW:1:1107:4875:14359_1:N:0 productive Homsap IGHV3-7*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 174 90.48 38/42 nt Homsap IGHD7-27*01 F 3 8 8 5 8.8.5 [3.17.38.11] CATGGYW in-frame + tgcagcctctggattcacctttagcaactatctgatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaagtgagaaaaactatgtggactctgcgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgacagggggctattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttctccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1189 1188 M01495:47:000000000-JFBTW:1:1107:23259:14871_1:N: productive Homsap IGHV3-43D*04 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKDISRTYYYYAMDVW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtctctcttattagttgggatggtggtagcacatactatgcagactctgtgaagggtcgattcaccatctccagagacaacagcaaaaactccctgtatctgcaaatgaccagtctgagagctgaggacaccgccttgtattactgtgcaaaagatattagcaggacctactactactacgctatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1190 1189 M01495:47:000000000-JFBTW:1:1107:4697:15059_1:N:0 productive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1105 100.00 221/221 nt 99.55 220/221 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARGEEQWLVPNDYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 65 of V-REGION: 2 nucleotides (from position 108 in the user submitted sequence), (cause frameshift) tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggcgaagagcagtggctggtacccaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 355 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1191 1190 M01495:47:000000000-JFBTW:1:1107:10686:15433_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-16*02 F 2 8 8 12 8.8.12 [3.17.38.11] CDARSLWYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgatgctcgttctctttggtactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1192 1191 M01495:47:000000000-JFBTW:1:1107:5676:15932_1:N:0 productive Homsap IGHV3-48*03 F 1016 95.07 212/223 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-15*01 F 2 8 8 22 8.8.22 [3.17.38.11] CAKGDCSGGSCYSLVSDYNWFDPW in-frame + tgtagcctctggattcaccttcagtagttatgagatgaactgggtccgccaggctccaggaaaggggctggagtgggtttcatgcattagtagtagtactagtactatatactatgcagactctgtgaagggccgattcaccatctccagagacaacgccaaaaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggagattgtagtggtggtagctgctactccttggtttccgattacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1193 1192 M01495:47:000000000-JFBTW:1:1107:15219:16505_1:N: productive Homsap IGHV4-61*01 F, or Homsap IGHV4-61*08 F 1085 97.79 221/226 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-21*01 F 1 10 7 18 10.7.18 [3.17.38.11] CASGSELGWGSNYYYYMDVW in-frame + cactgtctctggtggctccgtcagcagtgatccttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagcgggtcggaattggggtggggatcaaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1194 1193 M01495:47:000000000-JFBTW:1:1107:17940:17141_1:N: productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARGAHLTVYGDYVAGYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacagccgtgtattactgtgcgagaggggctcatctaaccgtctacggtgactacgttgctggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1195 1194 M01495:47:000000000-JFBTW:1:1107:27139:17246_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1077 99.09 217/219 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 2 8 8 23 8.8.23 [2.17.38.11] CARDGCGKGSTSCYLYYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagacggatgtggcaaaggtagtaccagctgctatctttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1196 1195 M01495:47:000000000-JFBTW:1:1107:25167:17777_1:N: productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 193 79.03 49/62 nt Homsap IGHD3-16*01 F 3 8 8 18 8.8.18 [3.17.38.11] CAREKALTSGGTREFGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgcgcgagagaaaaggcgttaacgtctgggggaacccgggaattcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1197 1196 M01495:47:000000000-JFBTW:1:1107:20608:17988_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 183 84.31 43/51 nt Homsap IGHD6-13*01 F 1 8 8 12 8.8.12 [2.17.38.11] CATAGHSSSWWGYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagccggtcatagcagcagctggtggggttactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1198 1197 M01495:47:000000000-JFBTW:1:1107:5025:18830_1:N:0 productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ2*01 F 211 88.68 47/53 nt Homsap IGHD6-19*01 F 1 10 7 13 10.7.13 [3.17.38.11] CARDDAYSSGCFDLW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatgacgcttatagcagtggctgcttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1199 1198 M01495:47:000000000-JFBTW:1:1107:21271:18946_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARLMVRGAELDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggcttatggttcggggagccgaacttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1200 1199 M01495:47:000000000-JFBTW:1:1107:26667:19090_1:N: productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-26*01 F 2 8 8 11 8.8.11 [2.17.38.11] CATVNLWELPDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagtgaatttgtgggagctaccggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1201 1200 M01495:47:000000000-JFBTW:1:1107:21889:19177_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-2*01 F 2 8 7 19 8.7.19 [3.17.38.11] CARAAYCSSTSCSAYNWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcggcatattgtagtagtaccagctgctccgcgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1202 1201 M01495:47:000000000-JFBTW:1:1107:16203:19418_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1126 99.56 226/227 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-22*01 F 3 8 8 20 8.8.20 [4.17.38.11] CASNKFTMIVVETSYYYGMDVW in-frame + cctgcaaggcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcagactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcaacaagtttactatgatagtagtggaaacctcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1203 1202 M01495:47:000000000-JFBTW:1:1107:25464:19495_1:N: No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F (see comment) 404 64.57 144/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found, stop codons low V-REGION identity (64.57%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactcctcttagaaccccccctttttagttctgtagtaacccactatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 266 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1204 1203 M01495:47:000000000-JFBTW:1:1107:22341:19684_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARSSTSWHYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagtagtaccagctggcactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1205 1204 M01495:47:000000000-JFBTW:1:1107:6243:19700_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 980 100.00 196/196 nt Homsap IGHJ1*01 F (see comment) 152 76.92 40/52 nt Homsap IGHD6-13*01 F 2 2 8 12 2.8.12 [X.17.38.11] CARYEERAAAGMDW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) ctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatacgaagagagagcagcagctggtatggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 296 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1206 1205 M01495:47:000000000-JFBTW:1:1107:13790:20807_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1055 97.73 215/220 nt Homsap IGHJ4*02 F, or Homsap IGHJ5*02 F 138 80.95 34/42 nt Homsap IGHD3-16*02 F 3 8 7 5 8.7.5 [3.17.38.11] CAREVIW in-frame + cgctgtctatggtgggtccttccgtggatactactggaactggatccgccagcccccagggaaggggctggagtggattggggaaatcgaccatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagaggttatctggggccagggagtcctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 330 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1207 1206 M01495:47:000000000-JFBTW:1:1107:8283:21159_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1028 96.36 212/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-13*01 F 2 8 7 17 8.7.17 [3.17.38.11] CARAVPFRAAAGRNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcaagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggctgtgtattactgtgcgagagcggttcctttccgagcagcagctggtcgaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1208 1207 M01495:47:000000000-JFBTW:1:1107:18662:21251_1:N: productive Homsap IGHV4-61*01 F 1067 96.90 219/226 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 3 10 7 11 10.7.11 [3.17.38.11] CVRGVEGVPIDYW in-frame + cactgtctctggtggctccgtcaccagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattccagtgggagcaccaactacatcccctccctcaagagtcgagtcaccatgtcactagacacgtccaagaatcagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattattgtgttcggggagttgagggggtcccgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1209 1208 M01495:47:000000000-JFBTW:1:1108:9545:5788_1:N:0: productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1132 99.13 228/230 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD1-26*01 F 3 10 9 18 10.9.18 [2.17.38.11] CARAPYSGSYFGDYYYMDVW in-frame + ccatctccggggacagtgtctctactaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagagccccgtatagtgggagctactttggcgactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 379 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1210 1209 M01495:47:000000000-JFBTW:1:1108:7182:6242_1:N:0: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 8 15 8.8.15 [2.17.38.11] CAREIDCSGGSCSWDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagaaatagattgtagtggtggtagctgctcctgggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1211 1210 M01495:47:000000000-JFBTW:1:1108:4066:6820_1:N:0: productive Homsap IGHV4-39*01 F, or Homsap IGHV4-39*05 F or Homsap IGHV4-39*08 (F) 1130 100.00 226/226 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 2 10 7 22 10.7.22 [3.17.38.11] CARLIAYYGSGSYYRSKPYYFDYW in-frame + cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattgggagtatctattatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggctgtgtattactgtgcgagactgatcgcttactatggttcggggagttattatagatccaaaccgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1212 1211 M01495:47:000000000-JFBTW:1:1108:8262:7646_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*02 F 2 8 8 14 8.8.14 [3.17.38.11] CARDQGIYFQGVFGYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgctgactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagctgaggacacggccgtgtattactgtgcgagagatcaggggatctattttcagggagtgtttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1213 1212 M01495:47:000000000-JFBTW:1:1108:13556:8362_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-10*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARWVGDAFDIW in-frame + tgcagcctctggattcacctttagcacctatgccatgacctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtggcacatactacgcagattccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagatgggtgggggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1214 1213 M01495:47:000000000-JFBTW:1:1108:11621:9809_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1074 98.20 218/222 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD2-8*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARGRYCSNGICSYYYYYGMDVW in-frame + gcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacggcctgacagccgaggacacggccgtgtattactgtgcgagagggcgatattgtagtaatggtatatgctcctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1215 1214 M01495:47:000000000-JFBTW:1:1108:25254:10250_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD3-22*01 F 2 8 7 10 8.7.10 [3.17.38.11] CARGYYGRMGYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggttactacggacggatgggatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1216 1215 M01495:47:000000000-JFBTW:1:1108:15964:10942_1:N: productive Homsap IGHV3-7*01 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD5-18*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARDGGRYGDAFDIW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatggaggccgctacggtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1217 1216 M01495:47:000000000-JFBTW:1:1108:20938:11244_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARWVAAAGTYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagatgggtagcagcagctggcacgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1218 1217 M01495:47:000000000-JFBTW:1:1108:2158:11391_1:N:0 No rearrangement found Homsap IGHV1-18*01 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagatcgacccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 277 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1219 1218 M01495:47:000000000-JFBTW:1:1108:28090:11448_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARDGCSGGSCYHDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagatggttgtagtggtggtagctgctaccatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1220 1219 M01495:47:000000000-JFBTW:1:1108:6346:11556_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 7 21 8.7.21 [3.17.38.11] CAREVNDSSGSTSPGVPSLIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtaggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccatgtattactgtgcgagagaggtgaatgatagtagtggttctacatccccaggggttccctccttaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1221 1220 M01495:47:000000000-JFBTW:1:1108:27608:11722_1:N: unproductive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-18*01 F 3 8 8 18 8.8.18 [3.17.38.11] CAKVLRTHQRGYS*GPNDYW in-frame + rearranged sequence, stop codons tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgagaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtcctgaggacccaccaacgtggatacagctagggtcccaatgactactggggccagggaaccctggtcaccatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1222 1221 M01495:47:000000000-JFBTW:1:1108:2185:12101_1:N:0 productive Homsap IGHV3-9*01 F 1025 95.52 213/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKADSSGYYLQDAFDIW in-frame + tgcagcctctgggttcacctttagcgactatgccatgaactgggtccgccaggctccagggcaggggctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagccgatagtagtggttattacttacaagatgcttttgatatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1223 1222 M01495:47:000000000-JFBTW:1:1108:8069:12554_1:N:0 productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F (see comment) 166 74.19 46/62 nt Homsap IGHD3-16*01 F 3 8 8 14 8.8.14 [2.17.38.11] CAREVVMVPLTGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaagtagttatggttccacttacaggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1224 1223 M01495:47:000000000-JFBTW:1:1108:12613:12667_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 746 96.25 154/160 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-21*01 F 1 X 8 14 X.8.14 [X.7.38.11] CARQLGGGEVRYFDYW in-frame + atatcgcgaggggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaattgggggggggcgaagttcgctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 266 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1225 1224 M01495:47:000000000-JFBTW:1:1108:4429:12776_1:N:0 productive Homsap IGHV3-48*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARDEEYDSSGQYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgaggaatatgatagtagtggtcaatactactactactacggtatggacgtctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1226 1225 M01495:47:000000000-JFBTW:1:1108:24226:13032_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1082 99.09 218/220 nt Homsap IGHJ3*01 F 232 96.00 48/50 nt Homsap IGHD1-26*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARGWEWELHAFDVW in-frame + cgctgtctatggtgggtccttcagtggctactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagttctgtgaccgccgcggacacggctgtgtattactgtgcgagaggctgggagtgggagctacatgcttttgatgtctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1227 1226 M01495:47:000000000-JFBTW:1:1108:20104:13112_1:N: No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1020 95.50 212/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgaccctgataccaaatacagcccgtcctttctaggccaggtcaccatctcagccgacaggtccaccagcaccgcctacctgcagtggcgcagcctgaaggcctcggacaccgccatgttctcctgtgcgagaccctacgcctattgtgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 305 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1228 1227 M01495:47:000000000-JFBTW:1:1108:28483:13634_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-20*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARVRNWNYDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgttcacgagcacagtctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagagtgcgtaactggaactacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1229 1228 M01495:47:000000000-JFBTW:1:1108:8394:14076_1:N:0 productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD4-17*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARELMMNDYGDSSAYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagagctcatgatgaatgactacggtgactcttccgcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1230 1229 M01495:47:000000000-JFBTW:1:1108:11417:14282_1:N: productive (see comment) Homsap IGHV3-7*01 F 944 91.48 204/223 nt 91.03 203/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-6*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREMIAGRRGEYDYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT at codon 58 of V-REGION: 'CAA' (3 nucleotides at position 92 to 94 in the user submitted sequence), (do not cause frameshift); tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagCAAgatggaagtgataccatatacttcgcagattctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctatttattactgtgcgagagagatgatagcaggtcgtcggggggagtatgattactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1231 1230 M01495:47:000000000-JFBTW:1:1108:21368:14669_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1046 97.27 214/220 nt Homsap IGHJ5*02 F (see comment) 156 78.43 40/51 nt Homsap IGHD3-16*02 F 2 8 7 17 8.7.17 [3.17.38.11] CARGNYDYVWGSYRWWTNW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcaattatgattacgtttgggggagttatcgttggtggactaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1232 1231 M01495:47:000000000-JFBTW:1:1108:18310:16480_1:N: productive Homsap IGHV1-18*04 F 813 85.14 189/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARSDEHGTSSGIDFW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatgggatggatcaaccctaacaatggtgactcaaactatgcacaggaactccggggcagagtcaccatcaccacggacacatccacgagtacctcctacatggagttgaggagcctgagatctgacgactcggccatttactactgtgcgagatccgatgaacatggcacctcgtcgggcattgacttttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1233 1232 M01495:47:000000000-JFBTW:1:1108:24033:16613_1:N: productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD4-23*01 ORF 2 8 8 18 8.8.18 [3.17.38.11] CARDLGDYGGSGQYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatctaggtgactacggtgggtcgggccagtactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1234 1233 M01495:47:000000000-JFBTW:1:1108:12225:16936_1:N: productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD3-9*01 F 2 8 8 26 8.8.26 [3.17.38.11] CARDRGGRSRAYHSGYHKYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatcgaggggggcgatcacgagcttatcattctggttaccataaatactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 396 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1235 1234 M01495:47:000000000-JFBTW:1:1108:25052:17457_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKEYIVVAGSWPFDYW in-frame + tgcagcctctggattcacctttagcagctctgccatgagctgggtccgccaggctccagggaaggggctggaatgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagagtatatagtagtggctggaagttggccgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1236 1235 M01495:47:000000000-JFBTW:1:1108:20844:18944_1:N: productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-6*01 F 1 8 8 20 8.8.20 [2.17.38.11] CARDPMSSSSSTDYYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcccatgagcagctcgtcctcgacggactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1237 1236 M01495:47:000000000-JFBTW:1:1108:4660:20367_1:N:0 productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD6-13*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARDSSSSWYPGDWFDPW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagattcgagcagcagctggtacccgggggactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1238 1237 M01495:47:000000000-JFBTW:1:1108:23852:20383_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-3*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARGGDFWSGYYNWFDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcggcgatttttggagtggttattacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1239 1238 M01495:47:000000000-JFBTW:1:1108:17866:20549_1:N: productive Homsap IGHV3-7*01 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-6*01 F 1 8 8 21 8.8.21 [3.17.38.11] CARVWPYSSSSLAPYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagtttggccttatagcagctcgtctctcgccccctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1240 1239 M01495:47:000000000-JFBTW:1:1108:19831:21576_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 2 8 8 14 8.8.14 [3.17.38.11] CASAGPGIAVAVNDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagtgctggaccgggtatagcagtggctgttaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1241 1240 M01495:47:000000000-JFBTW:1:1117:7562:3379_1:N:0: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-16*02 F 3 8 7 9 8.7.9 [3.17.38.11] CARGATVFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggagctaccgtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1242 1241 M01495:47:000000000-JFBTW:1:1117:10365:4143_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARRVGSDYQIDYW in-frame + aagggttctggatacacctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggaatggatggggatcatctatcctggtgactctgataccagatacagcccatccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgcgtcggatctgactaccaaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1243 1242 M01495:47:000000000-JFBTW:1:1117:6233:5892_1:N:0: productive Homsap IGHV1-2*02 F 1068 98.63 216/219 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD2-2*01 F 2 8 8 26 8.8.26 [2.17.38.11] CARSPVEEGPHCSSTSCYSGSGYGMDVW in-frame + gcttctagatacaccttcaccggctactatatgcactgggtgcgacaggcccctagacaagggcttgagtggatgggatggatcaaccctaacagtggtggcaccaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgaggagccctgttgaggagggtccacattgtagtagtaccagctgctactcggggtccggttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 392 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1244 1243 M01495:47:000000000-JFBTW:1:1117:24164:6413_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1019 95.91 211/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-16*01 F 3 8 7 12 8.7.12 [3.17.38.11] CARSGGIMTYDDYW in-frame + tgcagcctctggattcaccgtcagtaacaaccacatgaactgggtccgccaggctcctgggaaggggctggagtgggtctcagtaatttacagcggtggtagcacatactacgcagactcagtgaagggccgattcaccatctccagagacaattccaggaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaagcggggggataatgacttacgatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1245 1244 M01495:47:000000000-JFBTW:1:1117:19402:6758_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-26*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARGILVGAISYFDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtattttagtgggagctatctcctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1246 1245 M01495:47:000000000-JFBTW:1:1117:17003:6761_1:N:0 productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 653 91.56 141/154 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 X 9 12 X.9.12 [X.4.38.11] CARDSSGYYYFDYW in-frame + atatcgcgaggggaattctcacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagggatagtagtggttattactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 254 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1247 1246 M01495:47:000000000-JFBTW:1:1117:15167:6926_1:N:0 unproductive (see comment) Homsap IGHV3-43D*03 F, or Homsap IGHV3-43D*04 F 566 99.13 114/115 nt 98.26 113/115 nt Homsap IGHJ6*04 F 261 90.48 57/63 nt Homsap IGHD2-2*01 F 2 8 X 15 8.X.15 [3.X.27.11] CAKDISRTYYYYAMDVW in-frame + rearranged sequence, stop codons in FR2-IMGT, from codon 39 of V-REGION: 108 nucleotides (from position 35 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcacctttgatgattatgccatctccagagacaacagcaaaaactccctgtatctgcaaatgaccagtctgagagctgaggacaccgccttgtattactgtgcaaaagatattagcaggacctactactactacgctatggacgtctggggctaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 255 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1248 1247 M01495:47:000000000-JFBTW:1:1117:9656:7189_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARHARYLYGSSYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgcgaggtacctttatggttcaagctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1249 1248 M01495:47:000000000-JFBTW:1:1117:23733:7519_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 917 90.13 201/223 nt Homsap IGHJ5*02 F 169 82.00 41/50 nt Homsap IGHD4-17*01 F 2 8 8 8 8.8.8 [3.17.38.11] CARDYGDYVW in-frame + tacagcctctggattcacccatagtagttctgccatgaactgggtccgccaaactccagggaaggggctagagtgggtctcaactattggtggttgtgtcagtaatacatactacacagactccgtgaagggccggttcaccagctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagactacggtgactacgtttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1250 1249 M01495:47:000000000-JFBTW:1:1117:9475:7591_1:N:0: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-8*01 F 1 8 7 12 8.7.12 [3.17.38.11] CASQGYHYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctcagtgaccgccgcggacacggctgtgtattactgtgcgagccaagggtaccactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1251 1250 M01495:47:000000000-JFBTW:1:1117:27781:7624_1:N:0 productive Homsap IGHV5-51*01 F 1181 97.57 241/247 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-9*01 F 2 8 8 23 8.8.23 [11.17.38.11] CARHPILTGHVRAGGNYYYYYMDVW in-frame + cggggagtctcggaagatcacatgtaagggaactggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatccatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatccaattttgactggtcacgttcgggcggggggaaactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1252 1251 M01495:47:000000000-JFBTW:1:1117:3863:7696_1:N:0: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1019 95.91 211/220 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD2-15*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARRLGYCNGGNCYWSFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaggagtcgaatctccatatctgtggacacgtccaagagccagttctcactgaagctgacctctgtgaccgctgcggacacggccatgtattactgtgcgagacgactaggatattgtaatggtggtaactgctactggtccttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1253 1252 M01495:47:000000000-JFBTW:1:1117:7912:7902_1:N:0: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*01 F, or Homsap IGHJ4*03 F (see comment) 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKGGGPFGDYVGYW in-frame + other possibilities: Homsap IGHJ6*03 (highest number of consecutive identical nucleotides) tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaaaggagggggccccttcggtgactacgtgggctactggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1254 1253 M01495:47:000000000-JFBTW:1:1117:17462:8039_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-12*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKDLGGYSGYADFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatctgggtggatatagtggctacgccgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1255 1254 M01495:47:000000000-JFBTW:1:1117:21708:9661_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*01 F 2 8 7 20 8.7.20 [3.17.38.11] CARQMPNCSSTSCPVPGAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacaaatgccgaattgtagtagtaccagctgccccgttcccggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1256 1255 M01495:47:000000000-JFBTW:1:1117:7398:9705_1:N:0: productive Homsap IGHV3-48*03 F 1167 99.16 235/237 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 2 8 8 9 8.8.9 [8.17.38.11] CARGLWHFGYW in-frame + ctgagactctcctgtgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagaaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctacaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaggcctctggcatttcggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 328 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1257 1256 M01495:47:000000000-JFBTW:1:1117:11963:9713_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 235 100.00 47/47 nt 8 8 7 8.8.7 [2.17.38.11] CARDYFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagggactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1258 1257 M01495:47:000000000-JFBTW:1:1117:2533:10081_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-26*01 F 1 8 8 19 8.8.19 [3.17.38.11] CAKDDLLLVGATHLHEYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatgaccttctactagtgggtgctacccacctccacgaatactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1259 1258 M01495:47:000000000-JFBTW:1:1117:16811:10144_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARLGYSYGYDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttggatacagctatggttacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1260 1259 M01495:47:000000000-JFBTW:1:1117:15642:10478_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARAYGSGNFYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacaccgccatgtattactgtgcgagggcctatggttcggggaatttctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1261 1260 M01495:47:000000000-JFBTW:1:1117:11098:10837_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARAYYGSGKDYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagcttactatggttcggggaaggactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1262 1261 M01495:47:000000000-JFBTW:1:1117:25559:10955_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-17*01 F 2 8 8 7 8.8.7 [3.17.38.11] CARRYGDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgctacggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1263 1262 M01495:47:000000000-JFBTW:1:1117:4748:11124_1:N:0 productive Homsap IGHV1-2*02 F 1077 99.09 217/219 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD5-18*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARERRPYSYGYLGNYYYMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagaggaggccctacagctatggttacttagggaactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1264 1263 M01495:47:000000000-JFBTW:1:1117:7893:11959_1:N:0 productive Homsap IGHV1-18*04 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-10*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARVTSRYFDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagttacgtctcggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1265 1264 M01495:47:000000000-JFBTW:1:1117:3955:12502_1:N:0 unproductive (see comment) Homsap IGHV7-4-1*01 F (see comment) 1014 95.89 210/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 3 8 8 X 8.8.X [2.17.38.11] GTGDGF#CDYW out-of-frame + rearranged sequence, stop codons 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaacaccaacactgggaacccaacgtatgcccagggcttcacaggacggtttgtcttctccttggacacctctgtcagcacggcatatctgcagatctgcagcctaaaggctgaggacactgccgtgtattagggtaccggggatggattttctgtgactactggggccagggaaccctggtcaccgtctcctccccctcgtctcctgtgagaattcccctcgcgatat 0 0 312 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1266 1265 M01495:47:000000000-JFBTW:1:1117:6872:12689_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD3-22*01 F 2 8 7 21 8.7.21 [3.17.38.11] CARHPKYYYDSSGYYQYWYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggcatcccaagtattactatgatagtagtggttattaccagtactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1267 1266 M01495:47:000000000-JFBTW:1:1117:9018:13297_1:N:0 productive Homsap IGHV3-11*01 F, or Homsap IGHV3-48*04 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARATSGWYRGFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcggactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtctattactgtgcgagagctactagtggctggtatcggggctttgactactggggccagggaaccctggtccccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1268 1267 M01495:47:000000000-JFBTW:1:1117:28344:13523_1:N: unproductive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-20*01 F 3 8 8 X 8.8.X [2.17.38.11] CARAVNGINQV#YNWFDPW out-of-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagggccgtaaatggaataaaccaagtgggtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1269 1268 M01495:47:000000000-JFBTW:1:1117:15372:13591_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CATDASGWYYFDYW in-frame + tgcagcgtctggattcaccttcagtagttatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaaataataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgacagatgccagtggctggtactactttgactactggggccaggaaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1270 1269 M01495:47:000000000-JFBTW:1:1117:26024:13637_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ1*01 F (see comment) 197 86.54 45/52 nt Homsap IGHD3-22*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARTLSSGYRCFQHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtcattcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgcggacccttagtagtggttataggtgcttccagcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1271 1270 M01495:47:000000000-JFBTW:1:1117:26019:13863_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKDPVGSDSYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgacctgggtccgccaggctccagggaaggggctggagtgggtctcagttattagtggtagtggtgctagtacattccacgcggactccgtgaagggccggttcaccatctccagagacaattccaagaacactctgtatctgcaactgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcccgtcggtagtgactcctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1272 1271 M01495:47:000000000-JFBTW:1:1117:18202:14035_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-9*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARAPMWTGYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagcccccatgtggactggttactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1273 1272 M01495:47:000000000-JFBTW:1:1117:22799:14140_1:N: unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARSAYYYDY* in-frame + rearranged sequence, stop codons; TRP 118 not identified gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagtgcgtattactatgactactagggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1274 1273 M01495:47:000000000-JFBTW:1:1117:4483:14316_1:N:0 productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F (see comment) 175 75.81 47/62 nt Homsap IGHD6-13*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDSYSSSWYGGVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatagttatagcagcagctggtacggcggcgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1275 1274 M01495:47:000000000-JFBTW:1:1117:23847:14542_1:N: unproductive (see comment) Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 3 8 7 X 8.7.X [3.17.38.11] CARVFRFSS*VL***WLTPDY#DYW out-of-frame + rearranged sequence, stop codons cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagtgtttagattcagcagctgagtactatgatagtagtggttaactccagactactagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1276 1275 M01495:47:000000000-JFBTW:1:1117:3276:15177_1:N:0 productive Homsap IGHV1-46*02 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 2 8 8 11 8.8.11 [2.17.38.11] CALSSDFWTFDYW in-frame + gcttctggatacaccttcaacggctactatattcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcagccctagtggtggtagcacaacctacgcacagaagttccagggcagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcactctcttccgatttttggacctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1277 1276 M01495:47:000000000-JFBTW:1:1117:6080:15183_1:N:0 productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARGERSGRYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaatagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgagcggtcagggagatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1278 1277 M01495:47:000000000-JFBTW:1:1117:18452:16276_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 1 8 8 17 8.8.17 [2.17.38.11] CGIGELLFLPVYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtggcatcggggagttattatttcttccggtctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1279 1278 M01495:47:000000000-JFBTW:1:1117:7341:16363_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARFGIEAAKDCW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagatttgggatagaggctgctaaggactgttggggccagggaaccctggtcgtcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1280 1279 M01495:47:000000000-JFBTW:1:1117:21347:16428_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARGPGDSSGSFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggtccgggtgatagtagtggttcttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1281 1280 M01495:47:000000000-JFBTW:1:1117:9427:16630_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD2-15*01 F 2 8 7 11 8.7.11 [3.17.38.11] CGGFSLRSGFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtggaggattttcccttaggtcggggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1282 1281 M01495:47:000000000-JFBTW:1:1117:19580:17623_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [2.17.38.11] CASSYYDSSGFPDAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagtagttactatgatagtagtggtttccccgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1283 1282 M01495:47:000000000-JFBTW:1:1117:14418:18719_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-22*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARAYYDSSGYSNW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagggcttactatgatagtagtggttattctaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1284 1283 M01495:47:000000000-JFBTW:1:1117:20321:20376_1:N: unproductive (see comment) Homsap IGHV4-61*01 F 1112 99.12 224/226 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-3*01 F 1 10 7 X 10.7.X [3.17.38.11] CGESAIFGVV#DAFDIW out-of-frame + rearranged sequence, stop codons cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtggagaatcggcgatttttggagtggtctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1285 1284 M01495:47:000000000-JFBTW:1:1117:7570:20597_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARSIGPYYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatccatagggccctactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1286 1285 M01495:47:000000000-JFBTW:1:1117:8155:20818_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD4-23*01 ORF 1 8 8 9 8.8.9 [3.17.38.11] CANPKLRRGYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaagggggtggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatcttcaaatgagcagtctgagagctgaggacacggctgtgtattactgtgcgaacccaaaactacggaggggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1287 1286 M01495:47:000000000-JFBTW:1:1117:15195:20994_1:N: productive Homsap IGHV1-2*02 F 960 93.15 204/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARPHSSGWYEWFSIDYW in-frame + gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaccccatagcagtggctggtacgagtggttttcgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1288 1287 M01495:47:000000000-JFBTW:1:1117:5692:21570_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAKARSWELPDPFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggctcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagcgaggtcgtgggagctcccggacccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattacgatttttggagtggttaccaagacaccccctttggcatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 489 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1289 1288 M01495:47:000000000-JFBTW:1:1117:10206:22427_1:N: productive Homsap IGHV4-38-2*01 F 1088 98.65 220/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 9 7 14 9.7.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1290 1289 M01495:47:000000000-JFBTW:1:1117:15978:23550_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARHLGGLVTPGLFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacatctaggtggactggttactccgggcctatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1291 1290 M01495:47:000000000-JFBTW:1:1117:16671:24223_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1054 98.17 214/218 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*02 F 1 8 8 18 8.8.18 [1.17.38.11] CARDHPPLRSIYYYYGMDVW in-frame + cctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaccacccccccctacgttccatctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1292 1291 M01495:47:000000000-JFBTW:1:1117:22300:24318_1:N: productive Homsap IGHV3-7*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-13*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARGRAATDTRDFDYW in-frame + tgcagcctctggattcacctttagttgttattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagggagagcggcaactgatacgagggactttgactactggggccagggaaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1293 1292 M01495:47:000000000-JFBTW:1:1117:17683:24785_1:N: productive Homsap IGHV1-18*01 F 960 93.15 204/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-10*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARAAITMVRGVHYYFDYW in-frame + gcttctggttacacctttaccaactatggtatcggctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgtttacaaaggtaacacagactatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgagagcggcaattactatggttcggggagtgcactactactttgactactggggccagggaaccctgatcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1294 1293 M01495:47:000000000-JFBTW:1:1118:19933:4014_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ1*01 F 251 98.08 51/52 nt Homsap IGHD6-19*01 F 1 8 8 18 8.8.18 [3.17.38.11] CASGYGSGWYSKGSEYFQHW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccggttcaccgtctccagagacaacgccaagaactcactgtatctgcagatgaacagcctgagagtcgaggacacggctgtgtattactgtgcgagcggttatggcagtggctggtactccaagggttctgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1295 1294 M01495:47:000000000-JFBTW:1:1118:21222:4176_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 1 8 8 17 8.8.17 [3.17.38.11] CARWEKGTAMVKGRNFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatgggagaagggtacagctatggtcaaaggccggaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1296 1295 M01495:47:000000000-JFBTW:1:1118:16036:4418_1:N:0 productive Homsap IGHV4-34*03 F 1050 97.72 214/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*02 F 1 8 7 14 8.7.14 [3.17.38.11] CARDLGAGSMAVWAYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagtccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatccgttgacacgtccaagaaccacttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatttaggtgccgggtcgatggcagtttgggcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1297 1296 M01495:47:000000000-JFBTW:1:1118:8814:4556_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 207 95.56 43/45 nt 8 8 6 8.8.6 [3.17.38.11] CARPFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgcctctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1298 1297 M01495:47:000000000-JFBTW:1:1118:8297:4624_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD5-18*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARDYEGYSYGAEVYYYGMDVW in-frame + tgcagcctctggattcacctttagtagttattggatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcaagagattacgaaggatacagctatggtgcggaggtctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1299 1298 M01495:47:000000000-JFBTW:1:1118:25700:4751_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARDDSGSWGYYNGMDVW in-frame + tgcagcctctggattcacctttaacagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaagtcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgatagtgggagctggggttactacaacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1300 1299 M01495:47:000000000-JFBTW:1:1118:21990:4927_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-8*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKGGLLDYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggggactattggactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1301 1300 M01495:47:000000000-JFBTW:1:1118:10727:5010_1:N:0 productive Homsap IGHV3-11*04 F, or Homsap IGHV3-48*03 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-21*01 F 2 8 8 7 8.8.7 [3.17.38.11] CARVDWNYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtagattggaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1302 1301 M01495:47:000000000-JFBTW:1:1118:8381:5189_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD5-18*01 F 3 8 8 17 8.8.17 [3.17.38.11] CARDRGGRYSYGSDAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcgggggggaagatacagctatggttctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1303 1302 M01495:47:000000000-JFBTW:1:1118:8308:5730_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-21*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARRGYCSGDDCFSNAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagtccgtccttccagggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgaggatattgtagtggtgatgactgtttctcgaatgcttttgatatctggggccaagggacgatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1304 1303 M01495:47:000000000-JFBTW:1:1118:26177:6006_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 996 94.98 208/219 nt Homsap IGHJ6*02 F (see comment) 211 82.26 51/62 nt Homsap IGHD5-18*01 F 3 8 8 13 8.8.13 [2.17.38.11] CAAPHRGYSYGLDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggttcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccaggaacgagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggcaccccaccgtggatacagctatggtttggacgtctggggccaagggaccacggtcaccgtctcctcagggggtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1305 1304 M01495:47:000000000-JFBTW:1:1118:4773:6249_1:N:0: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1070 97.76 218/223 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD1-26*01 F 3 8 8 9 8.8.9 [3.17.38.11] CARGLSGSDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggactgagtgggagcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1306 1305 M01495:47:000000000-JFBTW:1:1118:12685:7669_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD4-23*01 ORF 1 8 7 14 8.7.14 [3.17.38.11] CARARGEYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggagctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagcgcggggggaatattactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1307 1306 M01495:47:000000000-JFBTW:1:1118:14900:8317_1:N:0 No rearrangement found Homsap IGHV1-18*01 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaatggaaacggttggcggtgagaattcccctcgcgatat 0 0 263 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1308 1307 M01495:47:000000000-JFBTW:1:1118:5781:8363_1:N:0: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD2-15*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARHGGSSYYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatggtgggagctcctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1309 1308 M01495:47:000000000-JFBTW:1:1118:24128:9418_1:N:0 unproductive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 930 100.00 186/186 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*02 F 2 X 8 X X.8.X [X.16.38.11] CAETKCSVG#DYW out-of-frame + agctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcggaaaccaaatgttctgtcggaggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 281 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1310 1309 M01495:47:000000000-JFBTW:1:1118:18592:9875_1:N:0 productive Homsap IGHV4-61*01 F 1112 99.12 224/226 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt 10 7 7 10.7.7 [3.17.38.11] CASSYLDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagcagctaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1311 1310 M01495:47:000000000-JFBTW:1:1118:15285:10044_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDPVTGSGTENWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcccgttactgggtcgggtacagaaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1312 1311 M01495:47:000000000-JFBTW:1:1118:24292:10423_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-3*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARPNYDFWSGYYKGENWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacccaattacgatttttggagtggttattataagggggagaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1313 1312 M01495:47:000000000-JFBTW:1:1118:18591:10536_1:N: unproductive (see comment) Homsap IGHV5-51*04 F, or Homsap IGHV5-51*07 F (see comment) 177 54.23 109/201 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 1 5 9 12 5.9.12 [X.17.38.11] CARHGESGAPGNYW in-frame - rearranged sequence, stop codons low V-REGION score: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ctatgcgccttgccagcccgctcagcatagcagtggctggtactatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatatagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatggggagtcgggggcccctgggaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctt 0 0 300 4 (complrev_indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1314 1313 M01495:47:000000000-JFBTW:1:1118:18356:10647_1:N: productive Homsap IGHV1-2*02 F 987 94.52 207/219 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARVGIAVAGTYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtggcacaaactatgcacagaaatttcagggcagggtcaccatgaccagtgacacgtccatcagcacagcctacatggagctgagcaggctgaaatctgacgacacggccgtatattactgtgcgagagtgggtatagcagtggctggtacctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1315 1314 M01495:47:000000000-JFBTW:1:1118:27011:10965_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1038 96.40 214/222 nt Homsap IGHJ4*02 F, or Homsap IGHJ4*03 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARRAGWINGDSYPDYW in-frame + aaggcttctggatacacctttaccaactattggatcgcctgggtgcgccagatgcccgggaaaggcctggagtgggtggggatcatctatcctggtgactctgataccagaaagagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggagggcaggctggattaacggtgatagttaccccgactactggggccagggtaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1316 1315 M01495:47:000000000-JFBTW:1:1118:1899:11301_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 183 84.31 43/51 nt Homsap IGHD4-23*01 ORF 2 8 8 14 8.8.14 [3.17.38.11] CASLPRSVTYGGMDSW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) aagggttctggatacacctttaccaactactggatcggctgggtccgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagcctcccgagaagtgtgacctacggcggtatggactcttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1317 1316 M01495:47:000000000-JFBTW:1:1118:23534:11613_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-19*01 F 2 8 8 20 8.8.20 [3.17.38.11] CANIAVAGPSGFPYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaacatagcagtggctggtccgtcaggatttccctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1318 1317 M01495:47:000000000-JFBTW:1:1118:6108:11695_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD4-11*01 ORF 3 8 8 14 8.8.14 [3.17.38.11] CAKGAETTVVYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggggctgaaactacagtagtttactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1319 1318 M01495:47:000000000-JFBTW:1:1118:12242:12101_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1007 94.62 211/223 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKTTVGSAALGAYDIW in-frame + tgcagcctctggattcaccctcagtaattatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcaactattagtgctagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtttctgcaaatgaacagcctgagagccgaggacacggccatatattactgtgcgaaaactacggtagggtcagcggcattgggtgcttatgatatctggggccaagggtcaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1320 1319 M01495:47:000000000-JFBTW:1:1118:25579:12161_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-21*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARQLGAYCGGDCYDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagttgggggcatattgtggtggtgattgctatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1321 1320 M01495:47:000000000-JFBTW:1:1118:23266:12306_1:N: productive Homsap IGHV1-69*11 F, or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) 1046 95.20 218/229 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 1 8 8 10 8.8.10 [5.17.38.11] CASGWKYYFDYW in-frame + ctcctgcaaggcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtggatggaagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 323 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1322 1321 M01495:47:000000000-JFBTW:1:1118:19869:12686_1:N: No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F or Homsap IGHV4-59*12 (F) 938 91.82 202/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgctatcacaccgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 296 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1323 1322 M01495:47:000000000-JFBTW:1:1118:15488:13100_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1005 95.43 209/219 nt Homsap IGHJ6*03 F (see comment) 184 77.42 48/62 nt Homsap IGHD5-12*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARAGEGTISTYMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagctggagaggggacgatttcgacctacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1324 1323 M01495:47:000000000-JFBTW:1:1118:4751:13213_1:N:0 productive Homsap IGHV3-7*01 F 908 89.69 200/223 nt Homsap IGHJ6*02 F 206 81.97 50/61 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [3.17.38.11] CAKDLAYNDILDVR in-frame + TRP 118 not identified tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggtcccagggaaggggctggaatgggtggccaacataaaccaaggtgggcgtacgaaatattatctggactctgtggcgggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaagtgagcagcctgagagccggagacacggctatctattactgtgcgaaagatctggcctacaacgacattttggacgtccggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1325 1324 M01495:47:000000000-JFBTW:1:1118:17895:13695_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 3 8 7 19 8.7.19 [3.17.38.11] CARGGVPSDSRVTPRRPFDYW in-frame + cactgtctctagtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagctccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggaggcgttccgtcggatagccgggtaacgccaaggcgtcctttcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1326 1325 M01495:47:000000000-JFBTW:1:1118:26620:14415_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-17*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARADYGDLPGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggcagactacggtgacctccctggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1327 1326 M01495:47:000000000-JFBTW:1:1118:7495:14788_1:N:0 productive Homsap IGHV1-18*01 F 1023 96.35 211/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD3-3*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARRFLEWSYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcgcctggacaagggcttgagtggatgggagggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagacgatttttggagtggtcctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1328 1327 M01495:47:000000000-JFBTW:1:1118:16575:14802_1:N: productive Homsap IGHV1-18*01 F 1014 95.89 210/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-21*01 F 2 8 8 14 8.8.14 [2.17.38.11] CATARCGGDCFDFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagcccgttgtggtggtgattgcttcgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1329 1328 M01495:47:000000000-JFBTW:1:1118:10752:15203_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-23*01 ORF 3 8 7 11 8.7.11 [3.17.38.11] CARRGVENHFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaagaggggtggaaaatcactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1330 1329 M01495:47:000000000-JFBTW:1:1118:24218:15302_1:N: productive Homsap IGHV3-30*07 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 154 80.85 38/47 nt Homsap IGHD7-27*01 F 1 8 8 7 8.8.7 [3.17.38.11] CAREWTGIW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaatggactgggatatggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1331 1330 M01495:47:000000000-JFBTW:1:1118:10129:15552_1:N: productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD3-9*01 F 2 8 8 19 8.8.19 [2.17.38.11] CAATYYDILFAYYYYYGMDVW in-frame + gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggccacgtattacgatattttgttcgcttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1332 1331 M01495:47:000000000-JFBTW:1:1118:24613:15621_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD3-10*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARGGNHLWFGELSEFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggggaaaccacctatggttcggggagttatccgagttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1333 1332 M01495:47:000000000-JFBTW:1:1118:14795:16058_1:N: productive Homsap IGHV1-18*04 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-13*01 F 1 8 8 12 8.8.12 [2.17.38.11] CASAGSWVGAFDIW in-frame + gcttctggttacacctttaccagctacggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagcgctggcagctgggtcggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1334 1333 M01495:47:000000000-JFBTW:1:1118:5553:16238_1:N:0 productive Homsap IGHV1-18*01 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD6-19*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARQWLEKRRYYYGMDVW in-frame + gcttctggttacaccttcaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggctggcatggatcagcccttacaatggaaacataaactatgtacagaaactccagggcagagtcgccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacgggcgtgtattactgtgcgagacagtggctggaaaaacggagatactactacggaatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttcccctcgtctcctgtgagaattcccctcgcgatat 0 0 361 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1335 1334 M01495:47:000000000-JFBTW:1:1118:3794:16494_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F (see comment) 183 84.31 43/51 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARAGDYHAWSGNW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagcgggtgactaccacgcttggtccgggaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1336 1335 M01495:47:000000000-JFBTW:1:1118:5060:18151_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD3-16*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARGNKPADWGFNYYYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtaacaaaccggccgattggggcttcaattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1337 1336 M01495:47:000000000-JFBTW:1:1118:11999:18983_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD6-19*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARDRGKRVALRTHDPPYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagataggggtaagcgagtggccctaaggacccatgaccccccttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1338 1337 M01495:47:000000000-JFBTW:1:1118:16223:19402_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 210 90.20 46/51 nt Homsap IGHD2-8*01 F 2 8 7 8 8.7.8 [3.17.38.11] CARKGYMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaaaagggtacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1339 1338 M01495:47:000000000-JFBTW:1:1118:5216:19551_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-3*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARGPRSIRDNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcccaaggtcgattcgcgacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1340 1339 M01495:47:000000000-JFBTW:1:1118:20826:20752_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD2-2*01 F 3 8 8 25 8.8.25 [2.17.38.11] CARDGARTGTDNIVVVPAGDVYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatggggcgcgtacgggtaccgacaatattgtagtagtaccagctggtgacgtctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1341 1340 M01495:47:000000000-JFBTW:1:1118:20673:21340_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD4-17*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDHVETPDGDGAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcacgtagagaccccggacggtgatggtgcttttgatatctggggccaaggtacaatggtcaccgtctcttcagggagtgcatccgccccaaccctttcccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1342 1341 M01495:47:000000000-JFBTW:1:1118:21403:21554_1:N: productive (see comment) Homsap IGHV4-61*01 F, or Homsap IGHV4-61*03 F 787 98.76 159/161 nt 98.14 158/161 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 10 7 16 10.7.16 [3.17.16.11] CAKLVYDSSGYELMFDYW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 76 of V-REGION: 65 nucleotides (from position 140 in the user submitted sequence), (cause frameshift) cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagccgaggacacggccgtatattactgtgcgaaattagtctatgatagtagtggttacgagttgatgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 304 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1343 1342 M01495:47:000000000-JFBTW:1:1118:12343:21920_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 3 8 7 9 8.7.9 [3.17.38.11] CARGYSYGDYW in-frame + tgcagcctctgggttcaccgtcagtagcaaccacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaggatacagctatggggattactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1344 1343 M01495:47:000000000-JFBTW:1:2118:23487:1842_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*03 F or Homsap IGHV4-59*07 F 1001 95.00 209/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 2 8 7 13 8.7.13 [3.17.38.11] CAAYGSGGYSPFNYR in-frame + TRP 118 not identified ccctgtctctggtggctccatcagtagctactactggagctggctccggcagcccccagggaagggtctggagtggtttgggtatatctattacagtgggagcaccaactacaacccccccctcaagagtcgagtctccatatcagtagacacgtccaagaaccatttctccctgaagccgagccctgtgaccgctgcggacacggccatgtattactgtgcggcctatggttcggggggttatagcccctttaactacaggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcccccacgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1345 1344 M01495:47:000000000-JFBTW:1:2118:10783:1846_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ4*03 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 3 8 8 8 8.8.8 [2.17.38.11] CAREGQLGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtatattactgtgcgagagaagggcagctcggctactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1346 1345 M01495:47:000000000-JFBTW:1:2118:23596:2495_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-10*01 F 2 8 7 19 8.7.19 [3.17.38.11] CARDPGDGSGSQYYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatccgggggatggttcggggagtcaatactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1347 1346 M01495:47:000000000-JFBTW:1:2118:17868:3644_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD5-18*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARVGYSYADAFDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagtgggatacagctatgccgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgggaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1348 1347 M01495:47:000000000-JFBTW:1:2118:17916:4313_1:N:0 productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD2-15*01 F 1 8 7 14 8.7.14 [3.17.38.11] CARDRGYQLLPAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatcgggggtaccagctgctcccagcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1349 1348 M01495:47:000000000-JFBTW:1:2118:17402:4985_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-10*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARGAWFGEFPNWFDPW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggggcatggttcggggagttcccaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1350 1349 M01495:47:000000000-JFBTW:1:2118:14788:5217_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F or Homsap IGHV1-46*04 F 933 91.78 201/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-19*01 F 1 8 8 20 8.8.20 [2.17.38.11] CARDLGSSGSSVYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcttacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatctggggagcagtggctcgtcggtgtactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1351 1350 M01495:47:000000000-JFBTW:1:2118:21445:5356_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARDQYYYDSSGLYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaccagtattactatgatagtagtggtctttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1352 1351 M01495:47:000000000-JFBTW:1:2118:11352:5588_1:N:0 productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1028 96.36 212/220 nt 95.91 211/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 3 8 8 13 8.8.13 [3.17.37.11] CARSRGDITSPRDYW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 66 of V-REGION: 2 nucleotides (from position 110 in the user submitted sequence), (cause frameshift) aagggcactggatacagcttttcctcctactgggtcggttgggtgcgccaaatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatccaggggggatattacttcaccccgtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1353 1352 M01495:47:000000000-JFBTW:1:2118:6445:6111_1:N:0: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1055 95.63 219/229 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD3-10*02 F 3 8 10 24 8.10.24 [3.17.38.11] CTTGHSVTTPWGRFNLDLRNWYFDLW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtaccacaggtcattctgtgactacgccctggggacggttcaatttagatctacgaaactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 396 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1354 1353 M01495:47:000000000-JFBTW:1:2118:20727:6326_1:N:0 productive Homsap IGHV1-18*01 F 978 94.06 206/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARLVPATAIMSNAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgagattagtaccagctactgctataatgtctaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1355 1354 M01495:47:000000000-JFBTW:1:2118:19279:6694_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-14*01 ORF 1 8 8 16 8.8.16 [2.17.38.11] CARARDFDGSGHDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgagggacttcgacggatccggtcatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1356 1355 M01495:47:000000000-JFBTW:1:2118:9991:7010_1:N:0: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARVSGWELAYYDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtatcggggtgggagctagcgtattacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1357 1356 M01495:47:000000000-JFBTW:1:2118:19732:8039_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD3-10*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARDPVDYYGSGSRIGVDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatccggtagattactatggttcggggagccgtatcggggttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1358 1357 M01495:47:000000000-JFBTW:1:2118:25125:8190_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ1*01 F (see comment) 161 78.85 41/52 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [3.17.38.11] CAKVGGGATSPLDW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgtagtctctggattcacctttagcaactatgccatgagctgggtccgccaggctccagggaaggggctggagtgggcctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaaagtcggggggggagctacttccccgcttgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1359 1358 M01495:47:000000000-JFBTW:1:2118:27040:8465_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*02 F or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 680 100.00 136/136 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD5-18*01 F 3 X 7 22 X.7.22 [X.X.38.11] CASLSSYSYGSSREYYYYYYMDVW in-frame + ctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagcctatcttcatacagctatggttcctcccgagagtactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 266 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1360 1359 M01495:47:000000000-JFBTW:1:2118:17525:9388_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1046 97.27 214/220 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD3-3*01 F 2 8 7 17 8.7.17 [3.17.38.11] CARGDFWSGSLPIYGMDVW in-frame + tgctgtctatggtgggtccttcagtggttacaactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcataggggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagttgacacgtccaagagccagatctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgatttttggagtggttcactaccgatatacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1361 1360 M01495:47:000000000-JFBTW:1:2118:27139:9670_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-3*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARAGYYDFWSGYAPVYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcagggtattacgatttttggagtggttatgcacccgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1362 1361 M01495:47:000000000-JFBTW:1:2118:3386:10507_1:N:0 productive Homsap IGHV1-2*02 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARGPHPRYSGSYLAYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggccctcaccctcggtatagtgggagctacttggcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1363 1362 M01495:47:000000000-JFBTW:1:2118:18185:10534_1:N: No rearrangement found Homsap IGHV1-18*01 F 1014 95.89 210/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggatatatgtttcccggctatcatatcggctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcaagagatcggggtgactacgaccattttgaggttccctggccaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 337 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1364 1363 M01495:47:000000000-JFBTW:1:2118:24862:10611_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 8 17 8.8.17 [2.17.38.11] CTKVNGRRAVTGTGCSDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtacgaaagttaacgggcgaagagcagtaactggtacggggtgttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1365 1364 M01495:47:000000000-JFBTW:1:2118:18880:11338_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1029 95.95 213/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*02 F 2 8 8 11 8.8.11 [3.17.38.11] CACTTPLDAFDIW in-frame + gagggttctggctatagttttacaaactactggatcggctgggtgcgccagaggcccgggaaaggcctggagtggatgggcatcatctatcctggtgactctgataccacatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgtgcactaccccgttggatgcttttgatatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1366 1365 M01495:47:000000000-JFBTW:1:2118:14836:11460_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD1-26*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARGGGTTAYYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcaagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgggggtactacagcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1367 1366 M01495:47:000000000-JFBTW:1:2118:11367:12173_1:N: productive Homsap IGHV1-24*01 F (see comment) 449 77.48 117/151 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD2-15*01 F 2 X 8 13 X.8.13 [X.4.38.11] CATDILSGSWAFDIW in-frame + low V-REGION identity (77.48%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ctatgcgccttgccagcccgctcagcgagagatacgggaattctcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagacatactcagtggttcctgggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 254 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1368 1367 M01495:47:000000000-JFBTW:1:2118:7523:12423_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1014 95.89 210/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 3 8 8 19 8.8.19 [2.17.38.11] CARGRLLTITMVRGAGEHDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccgcctccttaccattactatggttcggggagcgggggagcatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1369 1368 M01495:47:000000000-JFBTW:1:2118:8629:12571_1:N:0 productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1041 97.26 213/219 nt Homsap IGHJ5*02 F (see comment) 156 78.43 40/51 nt Homsap IGHD3-9*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARDFLYPRGYFDGTW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattttctctacccgcgaggatattttgacgggacctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1370 1369 M01495:47:000000000-JFBTW:1:2118:19061:13145_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CATTRRYCSSTSCPADAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaccactcggagatattgtagtagtaccagctgcccagctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccagcccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1371 1370 M01495:47:000000000-JFBTW:1:2118:4958:13258_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1064 98.18 216/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-23*01 ORF 2 8 7 15 8.7.15 [3.17.38.11] CAREKMADKGGQAFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagaagatggctgacaaagggggacaagcttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1372 1371 M01495:47:000000000-JFBTW:1:2118:24914:13555_1:N: No rearrangement found Homsap IGHV5-51*05 F 795 85.92 183/213 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcaatcccaatctggggtcatggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 283 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1373 1372 M01495:47:000000000-JFBTW:1:2118:28791:13985_1:N: productive Homsap IGHV1-2*04 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-3*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDQNGYDMRSPIDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcaaaatgggtatgatatgaggtccccaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1374 1373 M01495:47:000000000-JFBTW:1:2118:22249:14090_1:N: productive (see comment) Homsap IGHV3-7*01 F 926 90.58 202/223 nt Homsap IGHJ5*02 F (see comment) 129 72.55 37/51 nt 8 8 11 8.8.11 [3.17.38.11] CARDRVLVWFGES (see V-DOMAIN Functionality comment) in-frame + IMGT/JunctionAnalysis gives no results for this JUNCTION; TRP 118 not identified other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagactccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatattatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtgtattactgtgcgagagatcgggtattagtatggttcggggagtctttccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1375 1374 M01495:47:000000000-JFBTW:1:2118:28931:14213_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD3-3*01 F 2 8 8 14 8.8.14 [2.17.38.11] CAAGNDFWSGSWFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcggcaggaaacgatttttggagtgggagctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1376 1375 M01495:47:000000000-JFBTW:1:2118:24170:14238_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD5-24*01 ORF 1 8 7 15 8.7.15 [3.17.38.11] CARAFVEMATINWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagccttcgtagagatggctacaattaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1377 1376 M01495:47:000000000-JFBTW:1:2118:29564:14322_1:N: productive Homsap IGHV3-7*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-2*01 F 3 8 8 11 8.8.11 [3.17.38.11] CASSWGPAAPGYW in-frame + tgcagcctctggattcatctttactaactattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgacaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacaccaagaactcactgtatctgcaaatgaacagcctgagagccgaagacacggccgtgtattactgtgcgagttcgtggggtccagctgctccgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1378 1377 M01495:47:000000000-JFBTW:1:2118:21705:14552_1:N: productive Homsap IGHV3-11*04 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-16*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARERAQRGVLPDYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaacgggcgcagagaggggttctgccagactactggggccagggaaccctggtcaccgtctcctcagggggtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1379 1378 M01495:47:000000000-JFBTW:1:2118:2021:15109_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 1 8 8 9 8.8.9 [2.17.38.11] CARAIGSGDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgatcgggtcgggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1380 1379 M01495:47:000000000-JFBTW:1:2118:10807:15263_1:N: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1064 96.07 220/229 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-3*01 F 3 8 10 16 8.10.16 [3.17.38.11] CARDRTIFGVVIIYFDYW in-frame + tgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcgtacgatttttggagtggttattatctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1381 1380 M01495:47:000000000-JFBTW:1:2118:19269:15684_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD3-10*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARGRTGCLGCYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagggcgaacggggtgtttgggttgctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1382 1381 M01495:47:000000000-JFBTW:1:2118:21688:16114_1:N: productive (see comment) Homsap IGHV3-69-1*01 P (see comment) 459 77.78 119/153 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-15*01 F 2 X 8 17 X.8.17 [X.6.38.11] CARAYCSGGSCYPYYFDYW in-frame + however the closest V is a pseudogene low V-REGION identity (77.78%); the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (8 AA in M01495:47:000000000-JFBTW:1:2118:21688:16114_1:N:; 7 AA in Homsap IGHV3-69-1*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ctatgcgccttgccagcccgctcagcgagagatacgggaattctcacaggagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatcggcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagcttattgtagtggtggtagctgctacccttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 271 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1383 1382 M01495:47:000000000-JFBTW:1:2118:5984:16418_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD6-6*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDAQLETYYYGMDVW in-frame + tgcagcctctggattcacctttagcaactatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaactattagtggtagtgctggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagacgctcagctcgagacctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccactcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1384 1383 M01495:47:000000000-JFBTW:1:2118:3513:16735_1:N:0 productive Homsap IGHV1-18*01 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-3*01 F 3 8 8 18 8.8.18 [2.17.38.11] CGSLGVVIGSNYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagcagggtgcgacaggcctctggacaagggctggagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgggagcttgggagtggttattgggagcaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1385 1384 M01495:47:000000000-JFBTW:1:2118:22943:16869_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARVGAGSYGGYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtgggcgcagggagctacggggggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1386 1385 M01495:47:000000000-JFBTW:1:2118:22738:16917_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD3-10*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARSGRMVRRVSYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatccggccgtatggttcgtagagtctcctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1387 1386 M01495:47:000000000-JFBTW:1:2118:20374:17275_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 924 91.32 200/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-13*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARPHSRSYGENWFDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaccccacagccgcagttacggtgagaattggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1388 1387 M01495:47:000000000-JFBTW:1:2118:17182:17532_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-2*01 F 3 8 8 9 8.8.9 [3.17.38.11] CAVPSSYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaactattagtggtagtggtggtaacacatactacacagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgccgttccatccagctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1389 1388 M01495:47:000000000-JFBTW:1:2118:12912:17903_1:N: productive Homsap IGHV3-7*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARDRGGNSFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagatcgtggtggtaactcctttgactactggggccagggaaccctgatcaccgtctcctcagggagtgcatccgccccaacctttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1390 1389 M01495:47:000000000-JFBTW:1:2118:26943:18039_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-9*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARGWGANYYDIGGETFDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggatggggagctaattactatgatattgggggggagacgtttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1391 1390 M01495:47:000000000-JFBTW:1:2118:23015:18629_1:N: productive Homsap IGHV3-48*03 F 841 99.41 169/170 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD1-26*01 F 3 X 8 13 X.8.13 [X.10.38.11] CARGSVGDSGSWTEW in-frame + ctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgttgattactgtgcgaggggatccgtcggggacagtggtagctggacagaatggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 273 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1392 1391 M01495:47:000000000-JFBTW:1:2118:17957:18717_1:N: productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD4-23*01 ORF 2 9 7 16 9.7.16 [3.17.38.11] CARVTGGKYTSYYYMDVW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagtcaccggtggtaaatacacgtcctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatcggccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1393 1392 M01495:47:000000000-JFBTW:1:2118:9015:18804_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD2-2*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARGVPAARATWLVASDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggagtaccagctgctagggcgacatggttggtagcttctgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1394 1393 M01495:47:000000000-JFBTW:1:2118:25003:18922_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD4-17*01 F 2 8 7 18 8.7.18 [3.17.38.11] CATGGGHGDYDYYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgacgggggggggccacggtgactacgactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1395 1394 M01495:47:000000000-JFBTW:1:2118:12892:19376_1:N: productive Homsap IGHV3-11*06 F 1034 95.96 214/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcacctttagcaactatctgatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1396 1395 M01495:47:000000000-JFBTW:1:2118:26598:19405_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARRVGIAAAGYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgtgtgggtatagcagcagctggctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1397 1396 M01495:47:000000000-JFBTW:1:2118:15201:20388_1:N: productive Homsap IGHV3-7*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGSVGDSGSWTEW in-frame + tgcagtctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaggggatccgtcggggacagtgggagctggacagaatggggccagggaacccaggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1398 1397 M01495:47:000000000-JFBTW:1:2118:6281:20555_1:N:0 productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD5-18*01 F 1 8 8 16 8.8.16 [2.17.38.11] CGSSDTAMVGYYYGMDVW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtggatcatcggatacagctatggttgggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1399 1398 M01495:47:000000000-JFBTW:1:2118:5373:20559_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD2-2*01 F 3 8 7 18 8.7.18 [3.17.38.11] CATGSDIVVVPAARNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgactggatcggatattgtagtagtaccagctgctcgcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1400 1399 M01495:47:000000000-JFBTW:1:2118:25877:20638_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ4*02 F (see comment) 159 81.25 39/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAREGGPYGSGSYYSAW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtggtagtggtggtaccacacactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaaggggggccgtatggttcggggagttattattcggcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1401 1400 M01495:47:000000000-JFBTW:1:2118:7011:21245_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-21*01 F 1 8 7 13 8.7.13 [3.17.38.11] CASHRGSLRYYFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacactgtatcttcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgtcccacaggggatcattgaggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1402 1401 M01495:47:000000000-JFBTW:1:2118:16479:21451_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARDSHGDYGIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattcgcacggtgactacggaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1403 1402 M01495:47:000000000-JFBTW:1:2118:5056:22090_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1059 98.17 215/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDGCTTCSAYYGMDVW in-frame + gcttctggagtcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcatagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatggctgtaccacctgctctgcctactacggaatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1404 1403 M01495:47:000000000-JFBTW:1:2118:7491:23030_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ2*01 F 220 90.57 48/53 nt Homsap IGHD6-19*01 F 2 8 8 14 8.8.14 [3.17.38.11] CVRRGTGVPYWYFDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctacagtggagcagcctgaaggcctcggacaccgccatgtattactgtgtgagacgcggaacgggagtcccatactggtacttcgacgtctggggccgtggcaccctgcttactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1405 1404 M01495:47:000000000-JFBTW:1:2118:18584:23548_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*01 F (see comment) 178 84.00 42/50 nt Homsap IGHD2-15*01 F 3 8 8 15 8.8.15 [2.17.38.11] CASRIVVVAAIEGMDVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtcgcatagtggtggtagctgctattgagggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1406 1405 M01495:47:000000000-JFBTW:1:2118:20108:23880_1:N: productive Homsap IGHV1-18*01 F 1059 98.17 215/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD6-19*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARVDSSGWRYSRWFDPW in-frame + gcttctggatacaccttcaccagttatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtggatagcagtggctggcgttactcccgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1407 1406 M01495:47:000000000-JFBTW:1:2118:13283:24239_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F (see comment) 192 86.27 44/51 nt Homsap IGHD2-21*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARDQLVVRGKPFDPW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagttgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcagttggtggttaggggtaaaccttttgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1408 1407 M01495:47:000000000-JFBTW:1:2118:9949:24303_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARPAYDSSGYYMGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccggcatatgatagtagtggttattacatgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcccctcgtctcctgtgagaattcccctcgcgatat 0 0 358 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1409 1408 M01495:47:000000000-JFBTW:1:2118:14775:24693_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-11*01 ORF 3 8 8 13 8.8.13 [3.17.38.11] CTTVTTAAHGFHDYW in-frame + tgcagcgtctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatggacagcctgagagctgaggacacagccgtgtattactgtaccacagtcacgacagcagctcacggtttccatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1410 1409 M01495:47:000000000-JFBTW:1:2118:19363:24940_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-9*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARDFSVDWLPGSYNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatttctcagttgactggttaccaggatcgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1411 1410 M01495:47:000000000-JFBTW:1:2118:12601:25187_1:N: productive Homsap IGHV4-34*11 F, or Homsap IGHV4-59*12 (F) (see comment) 917 77.14 189/245 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-19*01 F 2 8 7 22 8.7.22 [11.17.38.11] CARSGGIAVAGLEDFYYYYGMDVW in-frame + low V-REGION identity (77.14%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cnnngnnnncnnnnnnnctnnnnngngcnntcnanggtnngnccnncanngnntantactgnanctgnatncgnnngccccnaggganngagnnggagtgnnttggntatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagatctgggggtatagcagtggctggtttggaagacttctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1412 1411 M01495:47:000000000-JFBTW:1:2119:24133:2290_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD2-2*01 F 3 8 8 19 8.8.19 [2.17.38.11] CARSRVVPAAEHYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatcaagagtagtaccagctgccgaacactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1413 1412 M01495:47:000000000-JFBTW:1:2119:7555:2957_1:N:0: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-10*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARDLTMVRGVKAYYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggattagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcttactatggttcggggagttaaggcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1414 1413 M01495:47:000000000-JFBTW:1:2119:17384:3166_1:N:0 unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F (see comment) 152 76.92 40/52 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARSLGRAV*AAAGRYW in-frame + rearranged sequence, stop codons other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggtccttgggacgggctgtttaagcagcagctggtcgttactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1415 1414 M01495:47:000000000-JFBTW:1:2119:15645:3437_1:N:0 productive Homsap IGHV3-48*04 F (see comment) 448 80.00 112/140 nt Homsap IGHJ6*02 F 130 67.74 42/62 nt Homsap IGHD2-2*01 F 2 X 8 23 X.8.23 [X.0.38.11] CARDLYGCSSTSCSRGYYYYGMDVW in-frame + low V-REGION identity (80.00%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release atatcgcgaggggaattctcacaggagacgagggggaaaagggttggggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatctctatggatgtagtagtaccagctgctcccggggctactactactacggtatggacgtctggggccaagggacacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 272 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1416 1415 M01495:47:000000000-JFBTW:1:2119:21793:3471_1:N:0 unproductive (see comment) Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-21*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARDQFRVVTGGC*LLNW in-frame + rearranged sequence, stop codons gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaaaggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcagttccgggttgtaacgggagggtgttgattgctaaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgttcctgtgagaattcccctcgcgatat 0 0 361 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1417 1416 M01495:47:000000000-JFBTW:1:2119:9917:3540_1:N:0: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*01 F or Homsap IGHV4-61*07 F 975 100.00 195/195 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-15*01 F 2 3 7 13 3.7.13 [X.17.38.11] CARFSAYYYYGMDVW in-frame + agttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagattctccgcgtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 298 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1418 1417 M01495:47:000000000-JFBTW:1:2119:17169:3655_1:N:0 productive Homsap IGHV1-8*02 F 1041 97.26 213/219 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD2-15*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARGRGYCSGGSCYSVTIELDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccgggggtattgtagtggtggtagctgctactccgttacaatcgagctcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1419 1418 M01495:47:000000000-JFBTW:1:2119:22524:4132_1:N:0 productive Homsap IGHV3-11*04 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD1-26*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARGTEWELSGYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaggaacagagtgggagctgagcgggtactggggccagggaaccctggtcaccgtcgcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1420 1419 M01495:47:000000000-JFBTW:1:2119:24012:4572_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F 192 86.27 44/51 nt Homsap IGHD3-9*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARGDPTIGSLFRFNPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtatattactgtgcgagaggcgaccctacgattggctctttgttccggttcaacccctggggccagggaaccctggtcaccgtctcctcggggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1421 1420 M01495:47:000000000-JFBTW:1:2119:19810:4907_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-19*01 F 3 8 8 10 8.8.10 [3.17.38.11] CVTWVAHHFDYW in-frame + tgcagtctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgtgacgtgggtggcccaccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1422 1421 M01495:47:000000000-JFBTW:1:2119:8179:5279_1:N:0: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1010 95.45 210/220 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD3-9*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARGDPTIGSLFRFDPW in-frame + cactgtctatggtgggtccatcagtggttactactggacctggatccgccagcccccagggaaggggctggagtggattgggcaaatcaatcatagtggaagcaccaagtacaacccgtccctcaagagtcgagtcaccatatcaattgacacgtcgaagagccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtatattactgtgcgagaggcgaccctacgattggctctttgttccggttcgacccctggggccagggaaccctggtcaccgtctcctcggggagtgcatccgccccaacccttttccccctcgtctctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1423 1422 M01495:47:000000000-JFBTW:1:2119:19239:5463_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARRVGIAAAGYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgtgtgggtatagcagcagctggctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1424 1423 M01495:47:000000000-JFBTW:1:2119:19492:5685_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-2*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARDGCSSMCGMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagaagctattggatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggttgtagtagtatgtgcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1425 1424 M01495:47:000000000-JFBTW:1:2119:16211:5870_1:N:0 productive Homsap IGHV3-7*01 F 695 88.57 155/175 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD6-19*01 F 1 X 8 14 X.8.14 [X.12.38.11] CFTSLSGWNNDILDVR in-frame + TRP 118 not identified atatcgcgaggggaagggactggagtgggtggcgcaaatgaaggaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaattcagtgtatctgcaaatgaacagcctgagagccgaagacacggctgtttatcactgttttactagtctcagtggctggaacaacgacattttggacgtccggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 281 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1426 1425 M01495:47:000000000-JFBTW:1:2119:19585:6185_1:N:0 unproductive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-8*01 F 2 8 7 X 8.7.X [3.17.38.11] CATIVYIVLMVYAINP#YYYYMDVW out-of-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgctacgattgtctatattgtactaatggtgtatgctataaaccccactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1427 1426 M01495:47:000000000-JFBTW:1:2119:5467:6385_1:N:0: unproductive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 184 77.42 48/62 nt Homsap IGHD2-15*01 F 1 8 8 X 8.8.X [3.17.38.11] CARDLTDIVVVVAAT#MDVW out-of-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagacctaaccgatattgtagtggtggtagctgctactcatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1428 1427 M01495:47:000000000-JFBTW:1:2119:24145:6417_1:N:0 productive Homsap IGHV1-8*02 F 1059 98.17 215/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD7-27*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARSRTGDLSFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggtctcggactggggatctgtcgttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1429 1428 M01495:47:000000000-JFBTW:1:2119:15668:7003_1:N:0 productive Homsap IGHV3-11*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARGIGEWFGELLYDYW in-frame + cgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctcccggcaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtcaacggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaggtattggcgaatggttcggggagttattatacgactactggggccagggaaccctggtcaccgtctccgcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1430 1429 M01495:47:000000000-JFBTW:1:2119:8895:7079_1:N:0: unproductive Homsap IGHV4-38-2*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 123 72.92 35/48 nt Homsap IGHD2-8*01 F 1 9 7 X 9.7.X [3.17.38.11] CARDGHTVLMVYAIDER## out-of-frame + TRP 118 not identified cgctgtctctggttactccctcagcagtggttactactggggctggatccggcagcccccagggaaggggctggaggggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccagatcagtagacacgtccaagaaccagtgctcccggaagatgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagacggtcacactgtactaatggtgtatgctattgatgagcgggggggaccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1431 1430 M01495:47:000000000-JFBTW:1:2119:16672:7592_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*02 F 2 8 8 11 8.8.11 [3.17.38.11] CACTTPLDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgtgcactaccccgttggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1432 1431 M01495:47:000000000-JFBTW:1:2119:14998:7654_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARIGDRKDDFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaatcggtgaccgtaaagacgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1433 1432 M01495:47:000000000-JFBTW:1:2119:14292:7723_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-10*01 F 3 8 8 17 8.8.17 [3.17.38.11] CARLQGSTMVRGVNWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttcaggggtcgactatggttcggggagtcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1434 1433 M01495:47:000000000-JFBTW:1:2119:10602:7792_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 183 84.31 43/51 nt Homsap IGHD4-23*01 ORF 2 8 8 14 8.8.14 [3.17.38.11] CASLPRSVTYGGMDSW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) aagggttctggatacagctttgccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccaaatacagcccgtccttccaaggccaggtcaccatctcagcggacaagtccatcagtaccgcctacctgcaatggagcagcctgaaggcctcggacaccgccatgtattattgtgcgagcctcccgagaagtgtgacctacggcggtatggactcttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1435 1434 M01495:47:000000000-JFBTW:1:2119:3329:7836_1:N:0: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-18*01 F 3 8 7 17 8.7.17 [3.17.38.11] CARGYPRRGYSYGSAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggctacccccgacgtggatacagctatggttctgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1436 1435 M01495:47:000000000-JFBTW:1:2119:4368:8220_1:N:0: productive Homsap IGHV3-11*01 F 1070 97.76 218/223 nt Homsap IGHJ1*01 F (see comment) 152 76.92 40/52 nt Homsap IGHD3-9*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKELGDILTAYSSGW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgaaagaattgggcgatattttgactgcttattcgtcggggtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1437 1436 M01495:47:000000000-JFBTW:1:2119:15307:8752_1:N:0 productive Homsap IGHV4-59*08 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 7 17 8.7.17 [3.17.38.11] CASIGGRYYDSSGSKFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagtataggagggcggtactatgatagtagtggttcaaagtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1438 1437 M01495:47:000000000-JFBTW:1:2119:5140:8760_1:N:0: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-16*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARTVGSHGQADYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagtctgagaggcgaggacacggctgtgtattactgtgcaagaacagtcgggagccatggccaagcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1439 1438 M01495:47:000000000-JFBTW:1:2119:22655:8790_1:N:0 productive Homsap IGHV4-34*03 F 1172 99.16 236/238 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-2*01 F 1 8 7 13 8.7.13 [9.17.38.11] CARHHQLPYNWFDPW in-frame + agaccctgtccctcacctgcgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaaactgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagacatcaccagctgccctacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1440 1439 M01495:47:000000000-JFBTW:1:2119:14171:9103_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 1 8 8 12 8.8.12 [3.17.38.11] CAIHSSSNGGVGYW in-frame + aagggttctggatacacgtttagcaactattggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgagaccaaatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgatacatagcagctcgaatggaggggttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1441 1440 M01495:47:000000000-JFBTW:1:2119:21841:9340_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*02 F 3 8 8 14 8.8.14 [3.17.38.11] CATLFVVPAATPFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaactcactgtatctacaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgactcttttcgtagtaccagctgctacaccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1442 1441 M01495:47:000000000-JFBTW:1:2119:13774:9377_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F (see comment) 600 84.85 140/165 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD1-26*01 F 3 X 8 13 X.8.13 [X.9.38.11] CARGSVGDSGSWTEW in-frame + low V-REGION identity (84.85%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ctatgcgccttgccagcccgctcagccattgatggcagtagtcgttccatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggggatccgtcggggacagtgggagctggacagaatggggccagggaacccaggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 268 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1443 1442 M01495:47:000000000-JFBTW:1:2119:22356:9457_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 142 82.93 34/41 nt Homsap IGHD4-23*01 ORF 2 8 8 5 8.8.5 [3.17.38.11] CARDGRV in-frame + TRP 118 not identified tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggtagggtgggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1444 1443 M01495:47:000000000-JFBTW:1:2119:14314:9736_1:N:0 productive Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattggtagtagtggcaataccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1445 1444 M01495:47:000000000-JFBTW:1:2119:13984:10095_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 1 8 8 19 8.8.19 [3.17.38.11] CARSQARFLEWTYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagatcgcaagcacgatttttggagtggacatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1446 1445 M01495:47:000000000-JFBTW:1:2119:5936:10394_1:N:0 productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 24 8.8.24 [2.17.38.11] CARGAVTDYYDSSGYYDQRGWYFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagacctgacgacacggccgtgtattactgtgcgagaggggccgttacggattactatgatagtagtggttattacgatcaacgggggtggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1447 1446 M01495:47:000000000-JFBTW:1:2119:8654:10514_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 169 82.00 41/50 nt Homsap IGHD5-24*01 ORF 3 8 8 7 8.8.7 [2.17.38.11] CASKDSALW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtaaagatagcgccctctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1448 1447 M01495:47:000000000-JFBTW:1:2119:5817:10662_1:N:0 productive Homsap IGHV3-7*03 F 1088 98.65 220/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [3.17.38.11] CASGYYYDSSGYYYYYGMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaacaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccaaagacaacgccaagaattcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagtgggtattactatgatagtagtggctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1449 1448 M01495:47:000000000-JFBTW:1:2119:24001:10739_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-23*01 ORF 2 8 8 13 8.8.13 [3.17.38.11] CARLQGGNKYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttcaaggtgggaataaatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcccccgcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1450 1449 M01495:47:000000000-JFBTW:1:2119:20550:10779_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-21*01 F 2 8 8 10 8.8.10 [2.17.38.11] CASKGDHWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcaaaggcgatcactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1451 1450 M01495:47:000000000-JFBTW:1:2119:4604:10938_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARLPPDGSGSWGFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactccccccggatggttcggggagttggggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1452 1451 M01495:47:000000000-JFBTW:1:2119:14120:11223_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-9*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARSGPGGAGYHKPFDYW in-frame + aagggttctggatacagctttgccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgcgctcgggccctggtggcgctggttatcataaaccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1453 1452 M01495:47:000000000-JFBTW:1:2119:21611:11465_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD3-22*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARGGPSPEDYYDSSGTYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggggcccagcccagaagattactatgatagtagtggcacttactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1454 1453 M01495:47:000000000-JFBTW:1:2119:21219:12223_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*11 F or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-16*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARFSYADYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatccttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagattcagttatgcggactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1455 1454 M01495:47:000000000-JFBTW:1:2119:24401:12244_1:N: productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 819 97.66 167/171 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-7*01 F 1 X 8 15 X.8.15 [X.11.38.11] CARSTTSITGTTDFDYW in-frame + gcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccattaccagggacacatccacgagcacagcctacatgcagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagatccacgacgagtataactggaactaccgactttgactactggggccagggaacccgggtcaccgtctcctcagggagtgcatccgccacaacccttttccccc 0 0 280 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1456 1455 M01495:47:000000000-JFBTW:1:2119:18814:12656_1:N: productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARGSSGWYVEHYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggaagtagtggctggtacgtggaacactactggggccagggaaccctggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1457 1456 M01495:47:000000000-JFBTW:1:2119:24232:12931_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 2 8 7 16 8.7.16 [3.17.38.11] CARDISNYASDYYYMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatataagtaactacgcctcggactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1458 1457 M01495:47:000000000-JFBTW:1:2119:17013:13006_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*04 F 288 95.24 60/63 nt Homsap IGHD3-22*01 F 2 8 8 26 8.8.26 [3.17.38.11] CAREGYYDSSGEIKITMGSYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagagggttactatgatagtagtggtgaaataaaaattaccatgggctcctactactactacggtatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 396 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1459 1458 M01495:47:000000000-JFBTW:1:2119:16387:13060_1:N: unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARLGKEYYYDSSGYYPFDYW in-frame + rearranged sequence, stop codons gcttctggtggcaccttcagcagctatgctatcagctgggtgcgacaggcccccggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggctgagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagactgggcaaggagtattactatgatagtagtggttattacccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1460 1459 M01495:47:000000000-JFBTW:1:2119:21459:13144_1:N: productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1095 100.00 219/219 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD1-14*01 ORF 3 8 8 19 8.8.19 [2.17.38.11] CAADPVEDRNRRYYYYYMDVW in-frame + gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggcagaccccgtcgaagaccgcaacagacgatactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1461 1460 M01495:47:000000000-JFBTW:1:2119:4384:13444_1:N:0 productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-3*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARDRIFGVVETPDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagataggatttttggagtggttgaaacccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1462 1461 M01495:47:000000000-JFBTW:1:2119:15455:13844_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 23 8.8.23 [3.17.38.11] CAREGGSGSGSYFSNSGDTYYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaggggggatcaggtagtgggagctacttttccaattcgggggatacgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1463 1462 M01495:47:000000000-JFBTW:1:2119:17453:14624_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD4-17*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARDAFDYGDYVSPDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgccttcgactacggtgactacgtctcccctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1464 1463 M01495:47:000000000-JFBTW:1:2119:25835:14883_1:N: productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARGGYCGSTSCYPLIDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaggatattgtggtagtaccagctgctatcctctaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1465 1464 M01495:47:000000000-JFBTW:1:2119:2918:15418_1:N:0 productive Homsap IGHV3-33*08 F 971 92.83 207/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*02 F 3 8 8 19 8.8.19 [3.17.38.11] CAKGGGSVPAAIRVVGVFDYW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcgtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctcaagagatgattccaaaagcatcgcctatctgcaaatgaacagcctgaaaaccgaggacacagccgtatattactgtgcgaaaggagggggaagtgtaccagctgctatacgggtggtgggggtctttgactactggggccagggaatcctggtaatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1466 1465 M01495:47:000000000-JFBTW:1:2119:19966:15516_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-15*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKELMDCSGGSCYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagttcaagggaagggcctggagtgggtctcagctattagtgctagtggtggtagcacatactacgcagattccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagagttaatggactgtagtggtggtagctgctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1467 1466 M01495:47:000000000-JFBTW:1:2119:16671:15722_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD4-17*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARNIKVTTPEYYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaaacataaaggtgactacgcccgagtattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1468 1467 M01495:47:000000000-JFBTW:1:2119:23986:16077_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-23*01 ORF 3 8 8 11 8.8.11 [2.17.38.11] CARGTTVGAFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggaccacggtgggagcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1469 1468 M01495:47:000000000-JFBTW:1:2119:7626:16170_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARPDCSGGSCYPYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacctgattgtagtggtggtagctgctacccgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1470 1469 M01495:47:000000000-JFBTW:1:2119:11771:16174_1:N: productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 851 96.69 175/181 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-9*01 F 2 X 8 16 X.8.16 [X.14.38.11] CARASDYDILTGYYSEYW in-frame + ggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagctagcgattacgatattttgactggttattattcggaatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 293 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1471 1470 M01495:47:000000000-JFBTW:1:2119:20525:16479_1:N: unproductive (see comment) Homsap IGHV3-11*06 F (see comment) 872 87.89 196/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD2-2*01 F 1 8 8 5 8.8.5 [3.17.38.11] *YQFLDW in-frame + rearranged sequence, stop codons 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcaccttcagcgactattatatgaattggatccgccaggctccagggaaggggctggagtgggtttcatacactagcgatagttgtacttacacaagctatacagactgtgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgagcagcctgagagccgagggcaggggtaaattgtaatagtaccagttcctagactggggccagggaaccctggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1472 1471 M01495:47:000000000-JFBTW:1:2119:3567:16540_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CAASSGWSGVADYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgccgcaagcagtggctggtccggggttgctgactactggggccagggaaccctggtcaccgtctcctcaggaagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1473 1472 M01495:47:000000000-JFBTW:1:2119:18747:16576_1:N: productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDRRWGDSSGHAEFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagacagaaggtggggcgatagtagtggtcatgccgagtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1474 1473 M01495:47:000000000-JFBTW:1:2119:22088:16590_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*02 F 1 8 8 15 8.8.15 [2.17.38.11] CARGIGRLGELSLWNYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggtataggacgtttgggggagttatcgttatggaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1475 1474 M01495:47:000000000-JFBTW:1:2119:22820:16807_1:N: productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-14*01 ORF 1 8 8 11 8.8.11 [2.17.38.11] CTRGKTEGEFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatcggacgacacggccgggtattactgtacgagggggaaaaccgaaggggaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1476 1475 M01495:47:000000000-JFBTW:1:2119:19755:17259_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-12*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKYSLGAHEHAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatactccctaggtgcccatgagcatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1477 1476 M01495:47:000000000-JFBTW:1:2119:19383:17266_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*02 F 3 8 8 22 8.8.22 [2.17.38.11] CARDLIVVVPAAIPQYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatctgattgtagtagtaccagctgctataccgcaatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1478 1477 M01495:47:000000000-JFBTW:1:2119:8402:19180_1:N:0 productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1115 100.00 223/223 nt Homsap IGHJ1*01 F (see comment) 152 76.92 40/52 nt Homsap IGHD3-10*01 F 3 9 7 13 9.7.13 [3.17.38.11] CANHITMVRGVIKEW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgaaccatattactatggttcggggagtcatcaaagagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1479 1478 M01495:47:000000000-JFBTW:1:2119:19413:19535_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1042 99.06 210/212 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD3-10*01 F 2 7 8 14 7.8.14 [X.17.38.11] CAKSSWSTVYYYMDVW in-frame + gattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtaacacatactacgcagactccgtgaagggccggttcaccatctccagagacaatcccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaagttcgtggagtacagtctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcaaggagtgcatccgccccaacccttttccccc 0 0 318 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1480 1479 M01495:47:000000000-JFBTW:1:2119:22909:19835_1:N: productive Homsap IGHV1-2*04 F 924 91.32 200/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARVPWIQLWRFFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagcttggtgcgacaggcccctggacaagggcttgagtggatgggagggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagtcccgtggatacagctatggcggttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1481 1480 M01495:47:000000000-JFBTW:1:2119:12337:20460_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD4-17*01 F 2 8 7 11 8.7.11 [3.17.38.11] CARENYGDYVDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaaactacggtgactacgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1482 1481 M01495:47:000000000-JFBTW:1:2119:22420:20807_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-12*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARLRLIEGIDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactaaggttgatagagggcattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1483 1482 M01495:47:000000000-JFBTW:1:2119:24834:21895_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARADCSSTSCYFVYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagggcagattgtagtagtaccagctgctatttcgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1484 1483 M01495:47:000000000-JFBTW:1:2119:8135:22477_1:N:0 productive Homsap IGHV4-30-2*01 F 1130 100.00 226/226 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-19*01 F 3 10 7 17 10.7.17 [3.17.38.11] CARGGIGQWLYYYYGMDVW in-frame + cgctgtctctggtggctccatcagcagtggtggttactcctggagctggatccggcagccaccagggaagggcctggagtggattgggtacatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacaggtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagggggaatagggcagtggctatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1485 1484 M01495:47:000000000-JFBTW:1:2119:23451:22514_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1101 99.55 221/222 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD4-11*01 ORF 2 8 8 16 8.8.16 [3.17.38.11] CARRRIYSNFAYWYFDLW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcaactgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgtcgtatttacagtaacttcgcctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1486 1485 M01495:47:000000000-JFBTW:1:2119:6323:22708_1:N:0 productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1123 98.70 227/230 nt Homsap IGHJ5*02 F 156 78.43 40/51 nt Homsap IGHD6-19*01 F 1 10 9 11 10.9.11 [2.17.38.11] CARGARSSGWTAW in-frame + ccatctccggggacagtgtctctagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcatcccagacacatccaagaaccagttctccctccagttgaactctgtgactcccgaggacacggctgtgtattactgtgcaagaggcgcccgtagcagtggctggacagcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 358 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1487 1486 M01495:47:000000000-JFBTW:1:2119:8843:24191_1:N:0 productive Homsap IGHV1-8*01 F 969 93.61 205/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARQHDSSGYLPYFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagcatgatagtagtggttatttaccgtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1488 1487 M01495:47:000000000-JFBTW:1:2119:12779:24864_1:N: productive Homsap IGHV3-30*01 F 1088 98.65 220/223 nt Homsap IGHJ6*01 F 234 85.71 54/63 nt Homsap IGHD4-11*01 ORF 3 8 8 20 8.8.20 [3.17.38.11] CARGQEIMTTVTILYYYGMDVW in-frame + tgcaccctctggatgcaccttcagtagctatgctatgcactgggtccgccaggctccaggtaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagaggacaagaaataatgactacagtaactatactctactactacggtatggacgtctggggtcaagggtccacggtcacagtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1489 1488 M01495:47:000000000-JFBTW:1:2119:16083:24962_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD4-17*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARADYGDYGYYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagccgactacggtgactacgggtactactttgactactggggccagggaaccctggtcatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1490 1489 M02948:180:000000000-JFBGH:1:1102:16054:2274_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD5-12*01 F 1 8 8 12 8.8.12 [2.17.38.11] CATHLLAGVATILW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaactcacttgcttgctggagtggctacgatcctctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1491 1490 M02948:180:000000000-JFBGH:1:1102:13822:2621_1:N: productive Homsap IGHV3-7*01 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-24*01 ORF 2 8 8 10 8.8.10 [3.17.38.11] CARDDQWLLDYW in-frame + tgcagcctctggattcacctttagtagttattggatgacctgggtccgccaggctccagggaagggcctggagtgggtgtccaacataaagcaagatggaactgatcaaaactatgtggactctgtgaggggccgattcaccatctccagagacaacgcgaggaactcactgtatctgcaaatgaacagcctgagagccgcggacacggctgtgtattactgtgcgagagacgatcaatggctattggactactggggccagggaaccctggtcacggtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1492 1491 M02948:180:000000000-JFBGH:1:1102:10686:3517_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD6-13*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARGRRSDYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctactggatgtactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtagtaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccgagaacacactgtatttgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagaggccgtcggtcggactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1493 1492 M02948:180:000000000-JFBGH:1:1102:14758:3863_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*02 F 1 8 8 12 8.8.12 [2.17.38.11] CARVWGELSLWGYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagggtgtggggggagttatcgttatggggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1494 1493 M02948:180:000000000-JFBGH:1:1102:13937:3864_1:N: productive Homsap IGHV3-7*03 F 1220 100.00 244/244 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [10.17.38.11] CAREIYCSSTSCVYYYYYYMDVW in-frame + ggggtccctgagactctcctgtgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagagatatattgtagtagtaccagctgcgtatactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1495 1494 M02948:180:000000000-JFBGH:1:1102:5325:5482_1:N:0 productive (see comment) Homsap IGHV4-39*07 F 1073 98.64 217/220 nt 98.18 216/220 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD3-16*01 F 1 8 7 18 8.7.18 [3.17.38.11] CARRLNRLTHNYYYYYMDVW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 31 of V-REGION: 6 nucleotides (from position 23 in the user submitted sequence), (do not cause frameshift) cactgtctctggtggctccatcagtagttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagacgcctaaaccggttgacccacaactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1496 1495 M02948:180:000000000-JFBGH:1:1102:7008:5524_1:N:0 productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F (see comment) 179 82.69 43/52 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDSPQYDSSGYFEGW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagattcccctcaatatgatagtagtggttatttcgagggctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1497 1496 M02948:180:000000000-JFBGH:1:1102:10473:5683_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-3*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARDGGIRFLEWFLDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgggggaatacgatttttggagtggttcctcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1498 1497 M02948:180:000000000-JFBGH:1:1102:18535:5929_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARGLQLWLHFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggggtctacagctatggttacactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1499 1498 M02948:180:000000000-JFBGH:1:1102:7788:5940_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 2 8 7 17 8.7.17 [3.17.38.11] CAREPGYCSGGSCRYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagatgaggtctgtgaccgctgcggacacggccgtgtattactgtgcgagagagcccggatattgtagtggtggtagctgccgttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1500 1499 M02948:180:000000000-JFBGH:1:1102:14627:7128_1:N: productive Homsap IGHV3-48*03 F 762 95.76 158/165 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD1-26*01 F 3 X 8 18 X.8.18 [X.9.38.11] CARDPERGRYRNHDYGMDVW in-frame + gggaaggggctggagtgggttgcatacattagtaatagtggtcgtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacggcaaggactctctgtatctgcaaatgaacagcctgagagccgaggacacggctgtctattactgtgcgagagatcctgaaagggggcgatacaggaaccacgactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 283 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1501 1500 M02948:180:000000000-JFBGH:1:1102:19481:7180_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1055 97.73 215/220 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 3 8 7 18 8.7.18 [3.17.38.11] CARFNKQGVRGSYYYYMDVW in-frame + cactgtctctggtggctccatcagtgattactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcatcaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccatatattactgtgcgagattcaacaaacagggggttagagggtcctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1502 1501 M02948:180:000000000-JFBGH:1:1102:22060:7518_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD2-21*01 F 3 8 7 22 8.7.22 [3.17.38.11] CARAQEHIVVVIAINYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagctcaagagcatattgtggtggtgattgctatcaactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1503 1502 M02948:180:000000000-JFBGH:1:1102:5823:8169_1:N:0 productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD6-19*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARDRLLRFMAVAGTFW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagaccggttattgaggtttatggcagtggctggtacgttttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1504 1503 M02948:180:000000000-JFBGH:1:1102:19660:8693_1:N: unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-21*01 F 2 8 8 14 8.8.14 [3.17.38.11] CATRRAY*GGDCYSYW in-frame + rearranged sequence, stop codons aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgacacggcgcgcatattgaggtggtgattgctattcatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1505 1504 M02948:180:000000000-JFBGH:1:1102:20473:9475_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1011 95.05 211/222 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD4-23*01 ORF 2 8 8 20 8.8.20 [3.17.38.11] CARGLNDYRGRAYYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggattaaatgactacaggggtcgggcatactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1506 1505 M02948:180:000000000-JFBGH:1:1102:16318:9604_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAKDYSVYSSGWYSYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagattactcggtgtatagcagtggctggtactcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1507 1506 M02948:180:000000000-JFBGH:1:1102:25219:13093_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 169 82.00 41/50 nt Homsap IGHD6-19*01 F 1 8 8 20 8.8.20 [3.17.38.11] CARHECRGERQYSSGWCAPVIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcaacaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgagtgtcgcggggagaggcagtatagcagtggctggtgcgctccagtaatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1508 1507 M02948:180:000000000-JFBGH:1:1102:3894:13117_1:N: unproductive (see comment) Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-3*01 F 2 8 8 24 8.8.24 [3.17.38.11] CAKGPLPEFYDFWSGYGRGFGYFDYW in-frame + rearranged sequence, stop codons tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgctaggctccagggaaggggctggagttggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtatattactgtgcgaaaggacccctccccgaattttacgatttttggagtggttatgggcggggattcggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 390 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1509 1508 M02948:180:000000000-JFBGH:1:1102:23890:13446_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-15*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARPSPDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaccttcgcctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1510 1509 M02948:180:000000000-JFBGH:1:1102:23299:13518_1:N productive Homsap IGHV3-30*01 F, or Homsap IGHV3-30*11 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-1*01 F 3 8 8 9 8.8.9 [3.17.38.11] CARGSDTLDYW in-frame + tacagcttctggattcacctttggtgattatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagggtccgacacacttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1511 1510 M02948:180:000000000-JFBGH:1:1102:6120:13786_1:N: productive Homsap IGHV1-18*01 F, or Homsap IGHV1-69*01 F or Homsap IGHV1-69*11 F or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69D*01 F or Homsap IGHV1-8*03 F 924 91.32 200/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [2.17.38.11] CASFPWSGSYYFDYW in-frame + gcttctggttacacctttaccaactatgatatcgactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagctttccgtggagtgggagctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1512 1511 M02948:180:000000000-JFBGH:1:1102:6204:13887_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-16*02 F 3 8 8 12 8.8.12 [2.17.38.11] CARVVDYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagttgtcgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1513 1512 M02948:180:000000000-JFBGH:1:1102:28974:14226_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 8 8 17 8.8.17 [2.17.38.11] CAREAKYYYGSGSYYTDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggccaagtattactatggttcggggagttattatacagactactggggccagggaaccctggtcatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1514 1513 M02948:180:000000000-JFBGH:1:1102:28290:16067_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 201 88.24 45/51 nt Homsap IGHD6-13*01 F 1 8 7 10 8.7.10 [3.17.38.11] CAEGRSSWYVYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgccgagggtcgcagcagctggtacgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1515 1514 M02948:180:000000000-JFBGH:1:1102:13943:16330_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARGLSIAVAGPDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggttaagtatagcagtggctggccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1516 1515 M02948:180:000000000-JFBGH:1:1102:23628:16703_1:N productive Homsap IGHV4-38-2*01 F 1079 98.21 219/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-18*01 F 3 9 7 18 9.7.18 [3.17.38.11] CARDRYSYGYVQRSNAFDIW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagatcggtacagctatggttacgtacaacgttcaaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1517 1516 M02948:180:000000000-JFBGH:1:1102:14322:17666_1:N unproductive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD1-1*01 F 3 8 8 X 8.8.X [3.17.38.11] CAKASAYGGT#W out-of-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcaactatgccatgacctgggtccgccaggctccaggggaggggctggagtgggtctcaggtattagtggtagtggtggtagtacatactacgtagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagtcgaggacacggccgtatattactgtgcgaaagcctctgcttacggtggaacgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1518 1517 M02948:180:000000000-JFBGH:1:1102:8828:18452_1:N: productive Homsap IGHV4-34*03 F, or Homsap IGHV4-34*07 F 1041 97.26 213/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 3 8 7 20 8.7.20 [3.17.38.11] CARVDIVVVPAARAYYYYMDVW in-frame + cgctgtctatggtgggtccttcactggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatgaaatatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagatctccctggagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagtcgatattgtagtagtaccagctgctagggcctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1519 1518 M02948:180:000000000-JFBGH:1:1102:24627:19068_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ5*02 F 165 80.39 41/51 nt Homsap IGHD2-2*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARMGGLVPAAIHPW in-frame + gcttctggaggcaccttcagcaactttgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcgagaatgggtggactagtaccagctgctatccacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 352 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1520 1519 M02948:180:000000000-JFBGH:1:1102:21768:22462_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD5-18*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARHRGYSYGHDAFDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaggcaccgtggatacagctatggtcatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1521 1520 M02948:180:000000000-JFBGH:1:1102:16208:23465_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*02 F or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 760 100.00 152/152 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD1-26*01 F 1 X 8 18 X.8.18 [X.4.38.11] CARHGIVGATTFPWYYMDVW in-frame + agtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgggatagtgggagctactacgttcccatggtactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgctccaacccttttccccc 0 0 270 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1522 1521 M02948:180:000000000-JFBGH:1:1102:22020:23801_1:N productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 2 9 7 9 9.7.9 [3.17.38.11] CAGGIAPFDYW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgggtgggatcgcaccattcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1523 1522 M02948:180:000000000-JFBGH:1:1102:16653:23855_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-21*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDPGGGYSYNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatccgggtggaggttattcgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1524 1523 M02948:180:000000000-JFBGH:1:1102:21257:24276_1:N productive Homsap IGHV4-59*12 (F) 1055 97.73 215/220 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD1-14*01 ORF 3 8 7 12 8.7.12 [3.17.38.11] CARRKYYYSYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccttatcattagacacgtccaagaaccagttctccctgaggctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagacggaagtactactactcctacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1525 1524 M02948:180:000000000-JFBGH:1:1101:11977:2062_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-1*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARGAHWNDFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatttgcaaatgaacagtctgagagccgaggacacggctgtatattactgtgcaagaggcgcccactggaacgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1526 1525 M02948:180:000000000-JFBGH:1:1101:15047:2123_1:N: productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD6-13*01 F 1 8 8 11 8.8.11 [2.17.38.11] CARAGSNWCIDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcaagagctggcagcaactggtgtatagattattggggccagggactcctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1527 1526 M02948:180:000000000-JFBGH:1:1101:8486:3017_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARLKYYYDSSGYYVRAFDIW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagattgaagtattactatgatagtagtggttattacgtacgtgcttttgatatctggggccaaggggcaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1528 1527 M02948:180:000000000-JFBGH:1:1101:22002:3198_1:N: productive Homsap IGHV3-66*03 F 930 100.00 186/186 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD1-26*01 F 1 X 7 12 X.7.12 [X.17.38.11] CARSNTYYYGMDVW in-frame + atgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagctgtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagatctaatacctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 286 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1529 1528 M02948:180:000000000-JFBGH:1:1101:11715:3326_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 1 8 8 19 8.8.19 [3.17.38.11] CALLIPVRPYSSSWYSSIDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgccctcctcatccccgtacgtccatatagcagcagctggtactcgtcgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1530 1529 M02948:180:000000000-JFBGH:1:1101:15024:3385_1:N: productive Homsap IGHV3-21*07 (F), or Homsap IGHV3-23*05 F or Homsap IGHV3-48*04 F (see comment) 938 91.82 202/220 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD6-19*01 F 1 8 7 21 8.7.21 [3.17.38.11] CASSTYSSGWYGHYYYYYGMDVW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (7 AA in M02948:180:000000000-JFBGH:1:1101:15024:3385_1:N:; 8 AA in Homsap IGHV3-21*07): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcaccttcagcacctgtgccatgagttgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagtactggtaccacatactatgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagttctacgtatagcagtggctggtacgggcattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1531 1530 M02948:180:000000000-JFBGH:1:1101:8734:4701_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 174 82.35 42/51 nt Homsap IGHD6-19*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARALHSSGWWGYRW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgctgcatagcagtggctggtgggggtaccgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1532 1531 M02948:180:000000000-JFBGH:1:1101:7726:4866_1:N:0 No rearrangement found Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaatggtggtagctgcctcgtctcctgtgagaattcccctcgcgatat 0 0 271 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1533 1532 M02948:180:000000000-JFBGH:1:1101:13091:5154_1:N: unproductive (see comment) Homsap IGHV4-39*07 F, or Homsap IGHV4-39*09 (F) 1085 97.79 221/226 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-16*01 F 2 10 7 X 10.7.X [3.17.38.11] CARELG*LMT*NTWA#DCW out-of-frame + rearranged sequence, stop codons cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattgggagtatctattatagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccatatattactgtgcgagagagttggggtgactgatgacttagaatacttgggccttgactgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1534 1533 M02948:180:000000000-JFBGH:1:1101:14379:5241_1:N: No rearrangement found Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1091 97.38 223/229 nt 8 10 X 8.10.X [3.17.38.X] + no rearrangement found tgcagcctctggattcactttcattaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaagctgatggtgggacaacagactacgctgcacccgggaaaggcagattcaccatctcaagagatgactccaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacaggcgtgtattactgtaccacagtcgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 288 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1535 1534 M02948:180:000000000-JFBGH:1:1101:6589:5920_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKGGLGVVVPAAPIYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagcgattagtggtagtggtgctaccacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgttgtctctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggggcctaggagtagtagtcccagctgcccctatttactggggccagggaaccccggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1536 1535 M02948:180:000000000-JFBGH:1:1101:18857:6347_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 202 86.79 46/53 nt Homsap IGHD2-8*02 F 2 8 8 8 8.8.8 [2.17.38.11] CATGGGMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgactggtggcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1537 1536 M02948:180:000000000-JFBGH:1:1101:3549:6925_1:N:0 productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 1005 95.43 209/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD4-17*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARVGKSTYGDYWIGAFDIW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtgggaaaatccacctacggtgactactggattggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagagttcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1538 1537 M02948:180:000000000-JFBGH:1:1101:8837:7038_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtggctgcaaatggacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1539 1538 M02948:180:000000000-JFBGH:1:1101:26720:8821_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD7-27*01 F 1 8 7 19 8.7.19 [3.17.38.11] CAREEVRTGDGAYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaggaagtgcggactggggatggggcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1540 1539 M02948:180:000000000-JFBGH:1:1101:27723:8900_1:N: productive (see comment) Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 670 100.00 134/134 nt 99.25 133/134 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 X 12 8.X.12 [3.2.31.11] CARCRAVAGDFDSW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 88 nucleotides (from position 42 in the user submitted sequence), (cause frameshift) aagggttctggatacagctttaccagctactggatcagctgggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggtgtagagcagtggctggagactttgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 265 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1541 1540 M02948:180:000000000-JFBGH:1:1101:7116:8911_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-18*01 F 1 8 8 18 8.8.18 [2.17.38.11] CAKGRTAMVQGDYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaagggccggacagctatggtccagggtgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1542 1541 M02948:180:000000000-JFBGH:1:1101:26391:9022_1:N: productive Homsap IGHV3-33*08 F 1043 96.41 215/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-10*01 F 2 8 8 9 8.8.9 [3.17.38.11] CVRGRDWFDLW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccagactccagggaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattattgtgtgagggggagggactggttcgacctctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1543 1542 M02948:180:000000000-JFBGH:1:1101:20141:9051_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-23*01 ORF 2 8 7 13 8.7.13 [3.17.38.11] CARVDYGGKYYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtagactacggtggaaaatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1544 1543 M02948:180:000000000-JFBGH:1:1101:14955:11811_1:N productive Homsap IGHV3-21*07 (F), or Homsap IGHV3-48*03 F or Homsap IGHV3-48*04 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDRTDTAMSVDYW in-frame + tgcagcgtctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcggacagatacagctatgtccgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1545 1544 M02948:180:000000000-JFBGH:1:1101:11282:13400_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD6-13*01 F 1 8 8 16 8.8.16 [3.17.38.11] CAKHSSSWPYYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaactattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaacatagcagcagctggccttactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1546 1545 M02948:180:000000000-JFBGH:1:1101:23732:14189_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1547 1546 M02948:180:000000000-JFBGH:1:1101:5112:15150_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1064 98.18 216/220 nt Homsap IGHJ6*03 F (see comment) 256 90.32 56/62 nt Homsap IGHD7-27*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARGHLGYYYYMGVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcaatagactcgtccaagaaccagttctccctgaagctgaccgctgtgaccgctgcggacacggccgtgtattactgtgcgagaggtcacttgggctactactactacatgggcgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1548 1547 M02948:180:000000000-JFBGH:1:1101:11259:15601_1:N unproductive Homsap IGHV1-2*04 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD1-26*01 F 1 8 8 X 8.8.X [2.17.38.11] CARSIPNPLRWELL#W out-of-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaagtattccaaatcctttgcggtgggagctactggctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccctctcgtctcctgtgagaattcccctcgcgatat 0 0 355 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1549 1548 M02948:180:000000000-JFBGH:1:1101:15446:18301_1:N productive (see comment) Homsap IGHV1-3*01 F, or Homsap IGHV1-3*04 (F) or Homsap IGHV1-3*05 F 705 100.00 141/141 nt 99.29 140/141 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-15*01 F 3 8 X 19 8.X.19 [2.3.34.11] CARDGEPGVVVNYYYYYMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 42 of V-REGION: 78 nucleotides (from position 40 in the user submitted sequence), (do not cause frameshift) gcttctggatacaccttcactagctatgctatgcattggaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatggggagcctggagtggtggtgaattactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 293 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1550 1549 M02948:180:000000000-JFBGH:1:1101:14050:18315_1:N productive Homsap IGHV3-20*01 F, or Homsap IGHV3-20*02 ORF 701 96.03 145/151 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 1 X 8 11 X.8.11 [X.4.38.11] CARDRGSGWSDYW in-frame + tgcagcctctggtattaattggaatggtggtagcacaggttatgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacactctgagagccgaggacacggccttgtatcactgtgcgagagatcggggcagtggctggtctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 279 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1551 1550 M02948:180:000000000-JFBGH:1:1101:5514:18448_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ1*01 F 206 88.46 46/52 nt Homsap IGHD1-26*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARLVGATRRYFQHW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggtcgtgtattactgtgcgagattggtcggagctacgaggcggtacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1552 1551 M02948:180:000000000-JFBGH:1:1101:11598:18914_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-21*02 F 3 8 8 18 8.8.18 [3.17.38.11] CARHVVGTITSSYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtagtggggaccataacctctagctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1553 1552 M02948:180:000000000-JFBGH:1:1101:8936:19973_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD6-6*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARVPALIAARKHYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttcccgcactaatagcagctcggaagcactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1554 1553 M02948:180:000000000-JFBGH:1:1101:12853:21215_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [2.17.38.11] CASGVVGGYLPWFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtggtgttgtcggtggttatctcccgtggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1555 1554 M02948:180:000000000-JFBGH:1:1101:11434:21734_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*01 F 2 8 8 10 8.8.10 [3.17.38.11] CVRTHSYAPDYW in-frame + aagggttctggatatagatttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaggtccatcaacaccgcccacctgcagtggggcagcctgaaggcctcggacaccgccatgtattactgtgtgagaacccactcctacgcacccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1556 1555 M02948:180:000000000-JFBGH:1:1101:20475:21952_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 7 17 8.7.17 [3.17.38.11] CARGSLYYYDSSGYSLSYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggttccctgtattactatgatagtagtggttattccttgagctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1557 1556 M02948:180:000000000-JFBGH:1:1101:8291:23530_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ6*03 F (see comment) 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKGSTYYYNYYCYMDVW in-frame + other possibilities: Homsap IGHJ6*04 and Homsap IGHJ6*01 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggactgggtctcatctattgatggtagtggtgttaccacatactacgcagactccgtgaggggccggttcaccatctccagagacaattccaagaacacgctgtctctgcaaatgaacagcctgagaaccgaggacacggccgtatattactgtgcgaaaggaagtacttattactacaactactactgctacatggacgtctggggcagagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1558 1557 M02948:180:000000000-JFBGH:1:2115:14916:2729_1:N: productive Homsap IGHV3-21*07 (F) 1034 95.96 214/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDKTVGATLFEFW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagacaaaacagtgggagctacgttgtttgagttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1559 1558 M02948:180:000000000-JFBGH:1:2115:18870:3645_1:N: productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARDYNWFGVNYFDYW in-frame + gcttctggttacacctttaccagctatggcatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgagagattataactggttcggggtgaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1560 1559 M02948:180:000000000-JFBGH:1:2115:5673:4393_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD4-11*01 ORF 3 8 7 18 8.7.18 [3.17.38.11] CARVAPYTVTTYYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagttctgtgaccgctgcggacacggccgtgtattactgtgcgagagtagctccgtatacagtaactacgtactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1561 1560 M02948:180:000000000-JFBGH:1:2115:5106:5818_1:N:0 productive Homsap IGHV2-5*02 F 1200 97.99 244/249 nt Homsap IGHJ4*02 F (see comment) 231 97.92 47/48 nt Homsap IGHD4-17*01 F 2 10 7 13 10.7.13 [11.17.38.11] CGHRRGYPDYYFDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagctctacagcccatctctgaagagcaggctcatcatcaccaaggacacctccaaaaaccaggtggtcctcacactgaccaacatggaccctgtagacacagccacatattactgtggacacagacgtggctaccctgactactactttgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1562 1561 M02948:180:000000000-JFBGH:1:2115:16154:6447_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1056 97.30 216/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-14*01 ORF 1 8 8 14 8.8.14 [3.17.38.11] CARQMWDGITDTIDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatactacccgtccttccaaggccaggtcgccttctcagccgacaagtccatcagcaccgcctacctgcagtggagcagtttgaaggcctcggacaccgccatgtattactgtgcgagacagatgtgggacggaataactgataccattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1563 1562 M02948:180:000000000-JFBGH:1:2115:20264:6499_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD5-12*01 F 1 8 8 23 8.8.23 [2.17.38.11] CARLFEDIVATMYLLVHKDYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagactcttcgaggatatagtggctacgatgtatttgttagtgcacaaagactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtcccatgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1564 1563 M02948:180:000000000-JFBGH:1:2115:21762:6589_1:N: unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F (see comment) 1029 95.95 213/222 nt Homsap IGHJ4*03 F 177 85.42 41/48 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [3.17.38.11] *ARLGYCSSTSCYANYW in-frame + rearranged sequence, stop codons 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release aagggtgctggatacagctttactagctactggatcggctgggtgcgccagacgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatcgcagcagacaagtccaacagcaccgcctacctgcagtggagcagcctggaggcctctgacaccgccatgtattactgagcgagactgggatattgtagtagtaccagctgctatgcgaactactggggcccggggaccctggtcaccgtctcctcagggagtgcatccgccccagcccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1565 1564 M02948:180:000000000-JFBGH:1:2115:14182:6989_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F or Homsap IGHV4-59*12 (F) or Homsap IGHV4-59*13 F 1073 98.64 217/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARCSDSSGYIDYW in-frame + cactgtctctggtggctccatcagtagttactattggagctggatccggcagccccctgggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgcggcggacacggccgtgtattactgtgcgaggtgctctgatagtagtggttatattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1566 1565 M02948:180:000000000-JFBGH:1:2115:3366:7825_1:N:0 productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*02 F 2 8 8 18 8.8.18 [2.17.38.11] CARGDLGYCSSTSCYTIDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatggggtggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggacttaggatattgtagtagtaccagctgctatactattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1567 1566 M02948:180:000000000-JFBGH:1:2115:7405:8549_1:N:0 productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1091 97.38 223/229 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 10 11 8.10.11 [3.17.38.11] CTTPPDTNGHYCW in-frame + tgcagcctctggattcattttcagtaatgcctggatgaactgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcatcatctcaagggatgattcaaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattattgtaccacccccccggatactaatggtcattactgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1568 1567 M02948:180:000000000-JFBGH:1:2115:4388:8997_1:N:0 productive Homsap IGHV1-8*02 F 1014 95.89 210/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD3-3*01 F 1 8 8 20 8.8.20 [2.17.38.11] CARDCGLECQIPYYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagattgcggtttggagtgccaaattccttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1569 1568 M02948:180:000000000-JFBGH:1:2115:16501:9527_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARGAYYDKGNYFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggagcctactatgataagggaaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1570 1569 M02948:180:000000000-JFBGH:1:2115:24326:9862_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-11*01 ORF 3 8 7 15 8.7.15 [3.17.38.11] CARSKTVTTGGGVFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagatccaagacagtaactacgggtggtggggtatttgactactggggccagggaaccctggtcaccgtctcctcaggaagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1571 1570 M02948:180:000000000-JFBGH:1:2115:22434:11427_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 962 92.38 206/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKSGDGYIYTNFDYW in-frame + tgcagcgtctggattcaccttcagtgactactacatgagttgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaatcaggggatggctacatctatacgaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1572 1571 M02948:180:000000000-JFBGH:1:2115:12092:11737_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARGLSGSYLDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctggttgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccttagtgggagctaccttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1573 1572 M02948:180:000000000-JFBGH:1:2115:22025:12552_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD5-18*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARETRGYSYGTYYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagaaacccgaggatacagctatggtacttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1574 1573 M02948:180:000000000-JFBGH:1:2115:22874:13525_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-6*01 F 2 8 8 17 8.8.17 [2.17.38.11] CALLWAARSAYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcccttttatgggcagctcggtcggcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1575 1574 M02948:180:000000000-JFBGH:1:2115:8457:14506_1:N: unproductive (see comment) Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-16*01 F 3 8 7 X 8.7.X [3.17.38.11] CARGLSDYIWGSYH#DAFDIW out-of-frame + rearranged sequence, stop codons cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcctttccgattacatttgggggagttaccattgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1576 1575 M02948:180:000000000-JFBGH:1:2115:5047:14699_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 218 86.21 50/58 nt Homsap IGHD1-1*01 F 1 8 8 11 8.8.11 [2.17.38.11] CARDGTNYYMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatggaacgaactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1577 1576 M02948:180:000000000-JFBGH:1:2115:25241:14973_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-26*01 F 1 10 7 14 10.7.14 [3.17.38.11] CVRGGARNALDAFDIW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgtcagagggggagcccggaacgctcttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaactcttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1578 1577 M02948:180:000000000-JFBGH:1:2115:13738:16396_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 705 100.00 141/141 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD1-1*01 F 2 X 8 18 X.8.18 [X.1.38.11] CAKVELERPSLLINYGMDVW in-frame + gctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggaactggaacgtccctctctacttattaactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 259 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1579 1578 M02948:180:000000000-JFBGH:1:2115:28447:17379_1:N productive Homsap IGHV4-38-2*01 F 1025 95.52 213/223 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD1-1*01 F 3 9 7 13 9.7.13 [3.17.38.11] CARVRRLDWNPFDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) cgctgtctctgcttactccatcagtagtggttattactggggctggatccggcagccccccgggaaggggctggagtggattgcgactatttatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaggctgaactctgtgaccgccgcagacacggccgtctattactgtgcgagagtgcggaggcttgactggaacccttttgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1580 1579 M02948:180:000000000-JFBGH:1:2115:14618:17464_1:N productive Homsap IGHV4-38-2*01 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD1-26*01 F 1 9 7 15 9.7.15 [3.17.38.11] CARGGGTTAYYYGMDVW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgggggtactacagcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1581 1580 M02948:180:000000000-JFBGH:1:2115:11919:17646_1:N productive Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ1*01 F (see comment) 143 75.00 39/52 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [3.17.38.11] CAKDRGVLGATRDW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcggggggtattgggagctactcgggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1582 1581 M02948:180:000000000-JFBGH:1:2115:18967:17709_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F or Homsap IGHV4-59*13 F 1055 97.73 215/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-7*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARSNWNFYDYW in-frame + cactgtctctggtggctccatcagtagttactactggacctggatccggcagccccccgggaagggactggagtggattggttatatctattacactgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaggctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggagtaactggaacttctacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1583 1582 M02948:180:000000000-JFBGH:1:2115:7352:19046_1:N: unproductive (see comment) Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 3 8 8 X 8.8.X [3.17.38.11] CARAGIL**YQLPPI#FDYW out-of-frame + rearranged sequence, stop codons tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtaacacaaactacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagcggggatattgtagtagtaccagctgccccctattggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1584 1583 M02948:180:000000000-JFBGH:1:2115:22425:19676_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 202 86.79 46/53 nt Homsap IGHD2-2*01 F 2 8 7 17 8.7.17 [3.17.38.11] CARGIDCSSTSCFLTFDLW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcatcgattgtagtagtaccagctgctttctaaccttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1585 1584 M02948:180:000000000-JFBGH:1:2115:17142:19838_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*01 F 3 8 8 19 8.8.19 [2.17.38.11] CAASKDIVVVPAAILGAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcagcgagcaaggatattgtagtagtaccagctgctattttgggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1586 1585 M02948:180:000000000-JFBGH:1:2115:8908:19879_1:N: productive Homsap IGHV4-59*03 F 1073 98.64 217/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 7 16 8.7.16 [3.17.38.11] CACRPLEYYDSSGVFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatccattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtggacacgtccaagaaccaaatctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgtgtcgacctctcgagtactatgatagtagtggcgtttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1587 1586 M02948:180:000000000-JFBGH:1:2115:27193:20866_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt 8 7 8 8.7.8 [3.17.38.11] CARVHYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagtgcactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1588 1587 M02948:180:000000000-JFBGH:1:2115:19822:22363_1:N productive Homsap IGHV4-34*08 F 938 91.82 202/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-3*01 F 3 8 7 8 8.7.8 [3.17.38.11] CARGIVPDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggtattgtcccagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1589 1588 M02948:180:000000000-JFBGH:1:2115:17328:23115_1:N unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*04 F 1154 96.36 238/247 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-16*01 F 3 8 8 13 8.8.13 [11.17.38.11] CARGGSKYYHYMDVW in-frame + rearranged sequence, stop codons cggggagcccctgatgatctcctgaaagggttctggatacagctttaccagctactggatcggctgcgtgcgtcagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgatatcagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagcccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacagcgccatgtattactgtgcgagagggggatcaaaatactaccactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagcgcatccgccccaacccttttccccc 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1590 1589 M02948:180:000000000-JFBGH:1:2115:15780:24087_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F (see comment) 1083 86.67 247/285 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-10*01 F 2 8 7 19 8.7.19 [25.17.38.11] WARAYGSGSYWDYYYYYMDVW in-frame + 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ctatgcgccttgccagcccgctcagcatagtagtggggaattctcacaggagacgagggggaaaagggttgtagttggtgctcccactgtaatagatataccctgtccctcacctgcactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgggaccgctgcggacacggccgtgtattactgggcgagagcgtatggttcggggagttattgggactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 457 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1591 1590 M02948:180:000000000-JFBGH:1:2115:9058:24820_1:N: productive Homsap IGHV4-61*01 F 1103 98.67 223/226 nt Homsap IGHJ6*02 F 215 83.61 51/61 nt Homsap IGHD2-8*01 F 1 10 7 12 10.7.12 [3.17.38.11] CAREVLYPPGMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactattggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagttctgtgaccgctgcggacacggccgtgtattattgtgcgagagaggtattgtacccccccggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1592 1591 M02948:180:000000000-JFBGH:1:2114:19016:2089_1:N: productive Homsap IGHV1-2*03 F 702 85.26 162/190 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD4-23*01 ORF 2 0 8 20 0.8.20 [X.17.38.11] CASQDYGGNFLQPTKSNWFDPW in-frame + atatcgcgaggggaattctcacaggagacgagggggaaaagggttgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagtcaggactacggtggtaactttcttcagcccacgaagtcaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 314 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1593 1592 M02948:180:000000000-JFBGH:1:2114:13772:3022_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 7 10 8.7.10 [3.17.38.11] CARDNRGYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagataaccgtgggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1594 1593 M02948:180:000000000-JFBGH:1:2114:16920:3161_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F or Homsap IGHV3-21*03 F or Homsap IGHV3-21*06 F (see comment) 642 86.90 146/168 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD6-19*01 F 1 X 7 11 X.7.11 [X.11.38.11] CAKDGSEWSRSDW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (7 AA in M02948:180:000000000-JFBGH:1:2114:16920:3161_1:N:; 8 AA in Homsap IGHV3-21*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gccccagggaaggggctggagtgggtctcgaccattagtagtagtggagacgaattttatccagactcaataaagggccgattcaccatctccagagacaacgccaagaagtcagtatatctgcaaatgagcagcctgagagtcgaggacaccgctatctattactgtgcgaaagacggcagtgagtggtcacgtagcgactggggccagggaatcctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 265 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1595 1594 M02948:180:000000000-JFBGH:1:2114:18230:5500_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARVSGYSPGYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtttctggctactccccggggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1596 1595 M02948:180:000000000-JFBGH:1:2114:21715:5913_1:N: productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD6-19*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARDGPYQWLTEWSYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatggtccctatcagtggctgaccgaatggtcctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1597 1596 M02948:180:000000000-JFBGH:1:2114:24049:6500_1:N: productive Homsap IGHV4-38-2*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-15*01 F 2 9 7 9 9.7.9 [3.17.38.11] CARGGGSQGNW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcggaggtagccaagggaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1598 1597 M02948:180:000000000-JFBGH:1:2114:9944:7100_1:N:0 productive Homsap IGHV3-7*01 F 1043 96.41 215/223 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD1-26*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAREPGWELPHYYYYYGMDVW in-frame + tgcagcctctggattcatctttagtagctattggatgagttgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaggaagatggaagtgagaaaaactatgtggactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaaccggggtgggagctaccccattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1599 1598 M02948:180:000000000-JFBGH:1:2114:25625:7427_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-15*01 F 2 8 8 22 8.8.22 [2.17.38.11] CATETPYCSGGSCYPPISSPSVYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagaaacgccatattgtagtggtggtagctgctacccacccatttcgagcccaagtgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1600 1599 M02948:180:000000000-JFBGH:1:2114:7876:7642_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD4-17*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARGLWDYGDPMPTIQNW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcctatgggactacggtgaccccatgccgacaattcaaaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1601 1600 M02948:180:000000000-JFBGH:1:2114:5865:7822_1:N:0 unproductive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F (see comment) 1106 99.55 222/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD1-14*01 ORF 1 8 8 10 8.8.10 [3.17.38.11] *AGGRPGTTDSW in-frame + rearranged sequence, stop codons 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgagccggagggcgacccggcactacggacagttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1602 1601 M02948:180:000000000-JFBGH:1:2114:28166:8073_1:N: productive Homsap IGHV1-18*01 F, or Homsap IGHV1-2*02 F 951 92.69 203/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARDRLYYYGSGSYPLFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagataggctgtattactatggttcggggagttaccctctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1603 1602 M02948:180:000000000-JFBGH:1:2114:12533:8959_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-24*01 ORF 3 8 7 14 8.7.14 [3.17.38.11] CARERDGYTEGHFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaagagatggctacaccgagggacattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1604 1603 M02948:180:000000000-JFBGH:1:2114:2412:9509_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKTRAAGVVVAPIDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaacaagggcggcaggggtagtggtggcccccattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1605 1604 M02948:180:000000000-JFBGH:1:2114:13358:9865_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1038 96.40 214/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARHMSSGYYSPSDYW in-frame + aagggttctggatacaagtttatcagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatgggactcatctatcctggtgactcgaataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccattagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatatgagtagtggttattacagcccttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1606 1605 M02948:180:000000000-JFBGH:1:2114:24553:10114_1:N productive Homsap IGHV3-21*07 (F) 1007 94.62 211/223 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-21*02 F 3 8 8 11 8.8.11 [3.17.38.11] CMTDWAMTWFDPW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtatgacagactgggcgatgacctggttcgacccctggggccagggagacctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1607 1606 M02948:180:000000000-JFBGH:1:2114:26022:10458_1:N productive Homsap IGHV3-7*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARFIQGVAATDYW in-frame + tgcagcctctggattcacctttagaagctattggatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaactgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaaggactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgtgcgagatttattcagggggtagctgccactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1608 1607 M02948:180:000000000-JFBGH:1:2114:3291:10955_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*02 F or Homsap IGHV5-51*03 F 892 91.87 192/209 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 1 6 8 12 6.8.12 [X.17.38.11] CARHVDTAMVLDYW in-frame + acacattttccgactactgggtcggctgggtgcgccagatacccgggaaaggcttggagtggatggggatcatatatcctggtgattctgagaccagatacagcccgtccttccaaggccaggtcaccatgtcagccgacaagtccaccaacatcgccttcgtgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacgtggatacagctatggttcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccacc 0 0 309 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1609 1608 M02948:180:000000000-JFBGH:1:2114:4971:12058_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARGYSSGWYGGQIDFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggtatagcagtggctggtacggtggacaaattgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1610 1609 M02948:180:000000000-JFBGH:1:2114:14858:12287_1:N unproductive Homsap IGHV4-38-2*01 F 1034 95.96 214/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-22*01 F 3 9 7 X 9.7.X [3.17.38.11] CARTWLRL#YYYYMDVW out-of-frame + cgctgtctctggttactccatcaccagtggttactactggggctggatccggcagcccccaggtaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagtgtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaacatggttaagactgactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1611 1610 M02948:180:000000000-JFBGH:1:2114:19884:13697_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARDRLNHYCSSTSCSTYGMDVW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaccgacttaatcattattgtagtagtaccagctgctcgacgtacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1612 1611 M02948:180:000000000-JFBGH:1:2114:5952:13712_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD1-14*01 ORF 3 8 7 13 8.7.13 [3.17.38.11] CAREKHRPDYGMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagagaaacaccgacccgattacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1613 1612 M02948:180:000000000-JFBGH:1:2114:10653:14274_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD5-12*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARGGVDLVWFDPW in-frame + tgcagcctctggattcacctttagcagctatgacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctctatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggggaggagtggatttggtttggttcgacccctggggccggggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1614 1613 M02948:180:000000000-JFBGH:1:2114:28986:14516_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1014 95.89 210/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-12*01 F 1 8 8 14 8.8.14 [2.17.38.11] CEVATIGDYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgaagtggctacgattggggactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1615 1614 M02948:180:000000000-JFBGH:1:2114:29380:15281_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 222 95.83 46/48 nt 8 8 7 8.8.7 [3.17.38.11] CAKQGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaacaaggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1616 1615 M02948:180:000000000-JFBGH:1:2114:24409:15292_1:N productive Homsap IGHV1-8*02 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD2-15*01 F 2 8 8 20 8.8.20 [2.17.38.11] CASKPLYCSGGSCYSVRGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtaagcccctctattgtagtggtggtagctgctactctgtacgcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1617 1616 M02948:180:000000000-JFBGH:1:2114:26311:16082_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD6-13*01 F 2 8 8 6 8.8.6 [3.17.38.11] CASGTGYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgtctggtacgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1618 1617 M02948:180:000000000-JFBGH:1:2114:6413:16116_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1025 95.52 213/223 nt Homsap IGHJ6*04 F (see comment) 198 79.37 50/63 nt Homsap IGHD2-2*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARGRYCSSTSCYVMDVW in-frame + other possibilities: Homsap IGHJ6*03 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaggggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagaggacgatattgtagtagtaccagctgctatgtcatggacgtctggggcaaagggaccacggtcaccatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1619 1618 M02948:180:000000000-JFBGH:1:2114:20197:17220_1:N productive Homsap IGHV4-34*03 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-16*02 F 2 8 7 21 8.7.21 [3.17.38.11] CARARGYDYVWGSYLRRAGFDYW in-frame + cacttcctatggtgggtccttcagtgcttactactggagctggatccgccagcccccagggaaggggctggagtgcattggggaaatcaatcatagtgggaacaccaactacaacccgtccctcaagagtcgggtcaccatatcactagacacgtccaagagtcagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcaagaggatatgattacgtttgggggagttatcttcggagagccggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1620 1619 M02948:180:000000000-JFBGH:1:2114:7822:17864_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-15*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARDSSVAVAATHPYYFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtttgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagactattccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagattcgtcggtggcagtggctgccacacacccctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1621 1620 M02948:180:000000000-JFBGH:1:2114:23568:18784_1:N productive Homsap IGHV1-8*01 F 1050 97.72 214/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARITTVTTLAFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctagcagtggtaacacaggccatgcacagaagttccagggcagagtcaccatgaccagggacacctccataagcacagtctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgaggattactacggtgactacattagcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttcccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1622 1621 M02948:180:000000000-JFBGH:1:2114:9788:20370_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD4-17*01 F 1 8 8 20 8.8.20 [2.17.38.11] CSRPLGRGLRPVDYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgttcgcgtcccttgggacggggactacggccggtggactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1623 1622 M02948:180:000000000-JFBGH:1:2114:27151:20808_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-21*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARASVIAVGGFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagcatccgtgatagcggttgggggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1624 1623 M02948:180:000000000-JFBGH:1:2114:20274:21192_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAKDCYSLTLYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagactgctactctttaacattgtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1625 1624 M02948:180:000000000-JFBGH:1:2114:20972:22177_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD6-13*01 F 1 8 8 13 8.8.13 [3.17.38.11] CATSLSGRIYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctctgccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgacctccctgagcggcagaatctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1626 1625 M02948:180:000000000-JFBGH:1:2114:12023:22258_1:N productive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1095 100.00 219/219 nt 99.54 218/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-13*01 F 2 8 7 21 8.7.21 [3.16.38.11] CAREGIAAAGTRVDYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 47 of V-REGION: 1 nucleotides (from position 61 in the user submitted sequence), (cause frameshift) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccaggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagagggtatagcagcagctggtacgcgggtagactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1627 1626 M02948:180:000000000-JFBGH:1:2114:25041:23323_1:N productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 845 100.00 169/169 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 X 8 11 X.8.11 [X.10.38.11] CARAVAGNSVDYW in-frame + ccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcagtggctggtaattcggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 266 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1628 1627 M02948:180:000000000-JFBGH:1:2114:11861:23422_1:N productive Homsap IGHV4-61*01 F 1049 96.02 217/226 nt Homsap IGHJ6*02 F 191 87.76 43/49 nt Homsap IGHD1-26*01 F 1 10 7 8 10.7.8 [3.17.38.11] CARDGARDVW in-frame + cactgtctctggtggccccgtcagcagtgataactactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctccagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaaactgtactctgtgaccgctgcggacacggccgtgtattattgtgcgagagatggagctagggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1629 1628 M02948:180:000000000-JFBGH:1:2114:19297:23786_1:N unproductive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 192 86.27 44/51 nt Homsap IGHD2-15*01 F 2 8 8 X 8.8.X [3.17.38.11] CAKVWGPDIVVVVAAT*VST#W out-of-frame + rearranged sequence, stop codons other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtttggggccccgatattgtagtggtggtagctgctacctaagtttcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1630 1629 M02948:180:000000000-JFBGH:1:2113:13503:2699_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARLLRSSGYFDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttttgcgcagtagtggttattttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1631 1630 M02948:180:000000000-JFBGH:1:2113:25403:4371_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 2 8 8 13 8.8.13 [2.17.38.11] CAREYCSSTSCYDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagtattgtagtagtaccagctgctatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1632 1631 M02948:180:000000000-JFBGH:1:2113:19799:4790_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-16*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARHDSAGEWLFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactccgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgattcggctggggagtggctttttgactactggggccagggaacgctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1633 1632 M02948:180:000000000-JFBGH:1:2113:22686:6132_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-10*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARVPRSRGVAFDIW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtaccccgttcgcggggtgttgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1634 1633 M02948:180:000000000-JFBGH:1:2113:25448:7020_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ3*02 F 166 86.36 38/44 nt Homsap IGHD6-25*01 F 3 10 7 5 10.7.5 [3.17.38.11] CASQWIW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagtcagtggatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1635 1634 M02948:180:000000000-JFBGH:1:2113:6085:8398_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-10*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARDRGSNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagataggggatccaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1636 1635 M02948:180:000000000-JFBGH:1:2113:21987:8589_1:N: unproductive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD6-6*01 F 2 8 7 X 8.7.X [3.17.38.11] CARDLEYSSSSGSWS#YYYYYYYMDVW out-of-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatctcgagtatagcagctcgtccgggagctggagtgtattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 388 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1637 1636 M02948:180:000000000-JFBGH:1:2113:11207:9032_1:N: productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 8 8 8.8.8 [3.17.38.11] CARGYYLDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaggggttactacttagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1638 1637 M02948:180:000000000-JFBGH:1:2113:18596:9232_1:N: productive Homsap IGHV3-7*01 F 953 91.93 205/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-8*02 F 3 8 8 12 8.8.12 [3.17.38.11] CVRGGIERGWFDPW in-frame + tgtagcctctgcattcaccttaagtgactattggatgagctgggtccgccaggctccagggaagggtctggagtgggtggccaacataaagactgatggaagtgacaagaactatgtggactctgtgaagggccgattcacaatctccagagacaacggcaagaattcactgtatctacaaatcaacagcctgagagtcgaggacacggctgtgtattactgtgtgaggggtggtattgaacggggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1639 1638 M02948:180:000000000-JFBGH:1:2113:15433:10524_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1005 95.43 209/219 nt Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD2-8*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARAANLLSLW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggatacaccttcactagctatgctatgcattgggttcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggggctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggctgctaaccttttatccctctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1640 1639 M02948:180:000000000-JFBGH:1:2113:15005:10692_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-18*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARGPYSYGSYYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggccatacagctatggctcctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccatcccttttccccctcgtctcctgtgcgaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1641 1640 M02948:180:000000000-JFBGH:1:2113:19399:11239_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD4-17*01 F 3 8 8 18 8.8.18 [2.17.38.11] CASDTVTTFHVSGNDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtgatacggtgactacgtttcatgtttccggaaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1642 1641 M02948:180:000000000-JFBGH:1:2113:14694:12130_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*02 F 3 8 8 25 8.8.25 [3.17.38.11] CARDGDPPLIVVVPAALRYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatggcgatcccccacttattgtagtagtaccagctgctctaaggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 393 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1643 1642 M02948:180:000000000-JFBGH:1:2113:12389:12303_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD6-13*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARDLRDSSSSNYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatctccgggatagcagcagctctaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1644 1643 M02948:180:000000000-JFBGH:1:2113:28787:12940_1:N productive Homsap IGHV1-2*03 F 838 86.76 190/219 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 210 90.20 46/51 nt Homsap IGHD6-19*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARDGSGECTVSACYRWVDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) gcttctggaggcaccttcagcagctatgctatctgctgggttctacaggcccctggacaagggcttgagtggatgggatggatcggcgtctacaatggtggcacaaactatgcacagaagtttcagggcaggatcaccatgaccagggacacgtccatcaccacagcctacatggaactgaatagtctaacatctgacgacacggccgtatattattgtgcgcgagacgggtcgggggaatgcactgtgtccgcctgttatagatgggtcgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1645 1644 M02948:180:000000000-JFBGH:1:2113:13878:13199_1:N unproductive (see comment) Homsap IGHV3-21*05 (F) 1034 95.96 214/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*01 F 1 8 8 X 8.8.X [3.17.38.11] CATGGGPAAILSR#AFDIW out-of-frame + rearranged sequence, stop codons tacagcctctggattcaccttcagtagttatggcatgaactgggtccgccaggctccagggaaggggctggaatgggtttcatacattagtagtagttgtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgctactgggggaggaccagctgctattctttctcggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1646 1645 M02948:180:000000000-JFBGH:1:2113:16564:13257_1:N productive Homsap IGHV1-2*02 F 1059 98.17 215/219 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARVGIAVAGNYYGMDVW in-frame + gcttctggatacaccttcaccggctactctatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcaggacagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgggcagcctgagatctgacgacacggccgtgtattactgtgcgagagtcggtatagcagtggctggaaactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1647 1646 M02948:180:000000000-JFBGH:1:2113:25156:13862_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 771 99.36 155/156 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD2-2*01 F 3 X 8 16 X.8.16 [X.6.38.11] CARHGSLTVVPYYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) ctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacccgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgggtccctcacagtagtgccttactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 268 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1648 1647 M02948:180:000000000-JFBGH:1:2113:5575:15108_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1046 97.27 214/220 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-15*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARAVSGGSCVGSVGWFDPW in-frame + cactgtctctggtggctccatcagtagttactgctggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcacccactacaacccgcccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgaggacacggccgtgtattactgtgcgagagcggtgagtggtggtagctgcgtgggttcggtaggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcccccctcgtctcctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1649 1648 M02948:180:000000000-JFBGH:1:2113:23185:15596_1:N unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-3*01 F 1 8 8 X 8.8.X [2.17.38.11] CARA*PITIFGVVSLWV*SR#YYYYYGMDVW out-of-frame + rearranged sequence, stop codons gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaattactcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcctgacccattacgatttttggagtggttagtctctgggtttagagtcgtatactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 399 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1650 1649 M02948:180:000000000-JFBGH:1:2113:6676:16146_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-24*01 ORF 2 8 8 15 8.8.15 [3.17.38.11] CASQSTWLQFNINFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagtcagtcgacatggctacaattcaacatcaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1651 1650 M02948:180:000000000-JFBGH:1:2113:28914:16743_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 195 82.46 47/57 nt Homsap IGHD2-15*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARLGGDYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgggaggtgactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagattcccctcgcgatat 0 0 346 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1652 1651 M02948:180:000000000-JFBGH:1:2113:3183:17968_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-16*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARRGSGSPHALTGIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacgaggttcggggagtcctcatgctttgaccgggattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1653 1652 M02948:180:000000000-JFBGH:1:2113:5538:18162_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD5-18*01 F 3 8 7 20 8.7.20 [3.17.38.11] CARESGYSYDGANYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaagtggatacagctatgatggggcgaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1654 1653 M02948:180:000000000-JFBGH:1:2113:6439:18283_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F (see comment) 205 90.00 45/50 nt Homsap IGHD2-15*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARGDCSRGCAFDIW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggcgattgtagtaggggttgtgcttttgatatctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1655 1654 M02948:180:000000000-JFBGH:1:2113:7057:19642_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD7-27*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDLNWVYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatctcaattgggtttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1656 1655 M02948:180:000000000-JFBGH:1:2113:19223:19664_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*03 F (see comment) 177 85.42 41/48 nt Homsap IGHD2-2*01 F 2 8 8 11 8.8.11 [2.17.38.11] CATVSPLRYYAVW in-frame + other possibilities: Homsap IGHJ6*03 (highest number of consecutive identical nucleotides) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagtttcccctttacggtactatgccgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1657 1656 M02948:180:000000000-JFBGH:1:2113:16027:20583_1:N productive (see comment) Homsap IGHV4-61*01 F, or Homsap IGHV4-61*08 F 1079 98.21 219/223 nt 97.76 218/223 nt Homsap IGHJ4*03 F (see comment) 168 83.33 40/48 nt Homsap IGHD6-13*01 F 2 9 7 15 9.7.15 [3.17.38.11] CARVALAAAGTWYMDVW in-frame + potentially, because of detected insertion/deletion other possibilities: Homsap IGHJ6*03 (highest number of consecutive identical nucleotides) in CDR1-IMGT, from codon 36 of V-REGION: 3 nucleotides (from position 32 in the user submitted sequence), (do not cause frameshift) cgctgtctctggttactccatcagcagtggttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtagccttagcagcagctggtacgtggtacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1658 1657 M02948:180:000000000-JFBGH:1:2113:12456:20590_1:N productive Homsap IGHV4-31*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 3 10 7 15 10.7.15 [3.17.38.11] CATLIGTTVTTWPFDYW in-frame + cactgtctctggtggctccatcagcagtggtggttactactggagctggatccgccagcacccagggaagggcctggagtggattgggtacatctattacagtgggagcacctactacaacccgtccctcaagagtctagttaccatatcagtagacacgtctaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcaaccctgatcggtactacggtgactacgtggccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1659 1658 M02948:180:000000000-JFBGH:1:2113:25644:20853_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-24*01 ORF 2 8 8 14 8.8.14 [3.17.38.11] CARDYQRWLQSPIDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagattatcagagatggctacaatcgcctattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1660 1659 M02948:180:000000000-JFBGH:1:2113:8881:21187_1:N: productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARGGYYYDSSGPTWGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggggggttattactatgatagtagtggccccacttggggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1661 1660 M02948:180:000000000-JFBGH:1:2113:9164:22160_1:N: productive Homsap IGHV4-59*12 (F) 1100 100.00 220/220 nt Homsap IGHJ5*02 F (see comment) 156 78.43 40/51 nt Homsap IGHD6-19*01 F 1 8 7 10 8.7.10 [3.17.38.11] CARGGSSGWGIW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagaggcggtagcagtggctgggggatctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1662 1661 M02948:180:000000000-JFBGH:1:2113:22307:22806_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 998 94.17 210/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcacctttagcacctatgccatgacctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtcgtagtgggggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1663 1662 M02948:180:000000000-JFBGH:1:2113:10458:22897_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 985 100.00 197/197 nt Homsap IGHJ4*02 F 196 97.56 40/41 nt Homsap IGHD4-11*01 ORF 3 2 8 5 2.8.5 [X.17.38.11] CATEDYW in-frame + gctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 276 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1664 1663 M02948:180:000000000-JFBGH:1:2113:21858:23110_1:N productive (see comment) Homsap IGHV4-38-2*01 F 1011 95.05 211/222 nt 94.59 210/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 9 7 14 9.7.14 [3.16.38.11] CARDGGGSYYGFLDYW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 39 of V-REGION: 1 nucleotides (from position 40 in the user submitted sequence), (cause frameshift) cgctgtctctccttactccatcaccattggttactactgggctggatccggcagcccccagggaaggggctggagtggattgggagtatctaccatggtgggagcacctactacaacccgtccctcaagagtcgactcaccatatcagcagacacgtccaagaaccagttctccctgaagttgtactctgtgaccgccgcagacacggccgtgtattactgtgcgagagatggaggtgggagctactacggtttccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1665 1664 M02948:180:000000000-JFBGH:1:2113:18461:23378_1:N productive Homsap IGHV3-7*03 F 944 91.48 204/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 3 8 8 10 8.8.10 [3.17.38.11] CARAQSLYFDYW in-frame + tgaagtctctggattcacctttagtacctattggatgacctgggtccgccaggctccagggaaggggctggagtggttggccaacataaacgcagatggaagtgaggaatactatttggactctgtgaggggccgattcaccgtctccaaagacaacgccaagaactcggtgtatctgcaaatcaacagcctgagagtcgaggacacggccatatattactgtgcgagagcccaaagtctttattttgactactgggcccagggaaccctggtcattgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1666 1665 M02948:180:000000000-JFBGH:1:2113:20232:25076_1:N productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-26*01 F 1 8 8 10 8.8.10 [2.17.38.11] CAADQVGAIVYW in-frame + gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggcagatcaggtgggagctattgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccctctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1667 1666 M02948:180:000000000-JFBGH:1:2112:18234:2499_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 123 72.92 35/48 nt Homsap IGHD2-2*01 F 3 8 8 8 8.8.8 [3.17.38.11] CARDTLPGIP in-frame + TRP 118 not identified tgcagcctctggattcatgtttagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatacgctcccgggtatcccgggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1668 1667 M02948:180:000000000-JFBGH:1:2112:7169:3653_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDPHIAARQRGLVYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagacccccatatagcagctcgtcaacggggtttggtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1669 1668 M02948:180:000000000-JFBGH:1:2112:8727:3781_1:N:0 productive Homsap IGHV4-59*12 (F) 1082 99.09 218/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 3 8 7 16 8.7.16 [3.17.38.11] CARDRREKMEWLATFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtatactactgtgcgagagatcgaagagaaaaaatggagtggctggcgacctttgactactggggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1670 1669 M02948:180:000000000-JFBGH:1:2112:7238:5900_1:N:0 productive Homsap IGHV3-11*03 F, or Homsap IGHV3-11*05 F or Homsap IGHV3-53*01 F or Homsap IGHV3-53*02 F (see comment) 619 90.60 135/149 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-1*01 F 3 X 7 13 X.7.13 [X.4.38.11] CARESLKDGILFDYW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (7 AA in M02948:180:000000000-JFBGH:1:2112:7238:5900_1:N:0; 8 AA in Homsap IGHV3-11*03): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release agtgggtctcaaatattgaaagtgatggtatcacacactacgcagattccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagagagcctgaaggacggcatcctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 252 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1671 1670 M02948:180:000000000-JFBGH:1:2112:9350:5901_1:N:0 productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-15*01 F 2 8 8 22 8.8.22 [2.17.38.11] CARPRYCSGGSCAFRHQGAAFDIW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacctcgatattgtagtggtggtagctgcgcgtttaggcaccaaggggctgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1672 1671 M02948:180:000000000-JFBGH:1:2112:10621:6512_1:N: productive Homsap IGHV4-59*12 (F) 1055 97.73 215/220 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD2-2*01 F 3 8 7 17 8.7.17 [3.17.38.11] CARVVVVVPARRGWYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccaggggaggggctggaatggattgggtatatctattacactgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagtggttgtagtagtaccagcccgaagaggctggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1673 1672 M02948:180:000000000-JFBGH:1:2112:21426:6540_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 147 76.47 39/51 nt Homsap IGHD5-24*01 ORF 1 8 8 8 8.8.8 [2.17.38.11] CAKVQMATPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtatattactgtgcgaaagtccagatggctacgccatggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1674 1673 M02948:180:000000000-JFBGH:1:2112:8583:7094_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARAPSSITEPYYFDFW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcactatttcgaccgacaggtccatcaccaccacctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagccccatcctccattactgagccctactactttgacttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1675 1674 M02948:180:000000000-JFBGH:1:2112:5220:7236_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD4-11*01 ORF 3 8 8 22 8.8.22 [2.17.38.11] CARVPTTVTTGFRNYYYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttcctactacagtaactaccggatttaggaattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgagagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1676 1675 M02948:180:000000000-JFBGH:1:2112:15563:7330_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-19*01 F 1 8 7 16 8.7.16 [3.17.38.11] CARLSGWDSYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggttaagtggctgggactcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1677 1676 M02948:180:000000000-JFBGH:1:2112:9840:8104_1:N:0 productive Homsap IGHV1-18*01 F 1050 97.72 214/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD2-2*01 F 2 8 8 22 8.8.22 [2.17.38.11] CARDPRYCSSTSCYYYYYYGMDVW in-frame + gcttctggttacacctttatcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacataaactatgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgagagatccgcgatattgtagtagtaccagctgctattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1678 1677 M02948:180:000000000-JFBGH:1:2112:27889:8600_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAKNIAVAGTILWGEFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggccccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaacatagcagtggctggtactattttgtggggagaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1679 1678 M02948:180:000000000-JFBGH:1:2112:21057:10083_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 3 8 8 9 8.8.9 [3.17.38.11] CARGGYGIDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagggggatacggaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1680 1679 M02948:180:000000000-JFBGH:1:2112:13978:10192_1:N productive Homsap IGHV4-61*01 F 1103 98.67 223/226 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD4-23*01 ORF 3 10 7 16 10.7.16 [3.17.38.11] CARAAVTRYYYYYYMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgacctctgtgaccgccgcagacacggccgtgtattactgtgcgagagcggcagtgactcgttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1681 1680 M02948:180:000000000-JFBGH:1:2112:26788:10415_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [3.17.38.11] CAKSPIYCSSTSCYSHYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaagtcctatttattgtagtagtaccagctgctactcccactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1682 1681 M02948:180:000000000-JFBGH:1:2112:16850:10553_1:N productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD6-6*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARGRIAARFSRYFWFDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtagcacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtcgaatagcagctcgtttctcgaggtatttctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1683 1682 M02948:180:000000000-JFBGH:1:2112:21080:10604_1:N productive Homsap IGHV3-7*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARGTGWGGLDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagagcacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagggactggttgggggggacttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1684 1683 M02948:180:000000000-JFBGH:1:2112:20552:10734_1:N productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1016 95.07 212/223 nt Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD3-16*01 F 3 9 7 13 9.7.13 [3.17.38.11] CARVAGGTFGGVDQW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctctggtgactccatcagcaatagtcactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcattctgggagcaccaactacagcccgtccctcaagagtcgagtcaccatatcagtagacaagtcgaagaaccagttctccgtgaggctgaactctgcgaccgccgcggacacggccgtgtattactgtgcgagagttgcgggaggaacgtttgggggtgtcgaccagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1685 1684 M02948:180:000000000-JFBGH:1:2112:19911:10822_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtggtagtggtggtaccacacactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1686 1685 M02948:180:000000000-JFBGH:1:2112:11358:11019_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD5-24*01 ORF 3 8 8 18 8.8.18 [3.17.38.11] CAKDQVGYQYYYYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcaagttggttaccaatattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1687 1686 M02948:180:000000000-JFBGH:1:2112:4491:12427_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 3 8 8 17 8.8.17 [3.17.38.11] CAKSGDRIVVVVPADFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatcgggggatcggatcgttgtagtagtaccagctgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1688 1687 M02948:180:000000000-JFBGH:1:2112:8230:13637_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 694 94.19 146/155 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-2*02 F 2 X 8 24 X.8.24 [X.5.38.11] CKLYPLLRGERYCSSTSCYTDYFDYW in-frame + atatcgcgaggggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgcaaactataccccctccttcgcggggagaggtattgtagtagtaccagctgctatactgactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 291 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1689 1688 M02948:180:000000000-JFBGH:1:2112:23344:13862_1:N productive Homsap IGHV3-7*03 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKCGGRAAAGTGFGYW in-frame + tgtagcctctggattcacctttagtagttattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatgtgggggaagggcagcagctggtacggggtttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1690 1689 M02948:180:000000000-JFBGH:1:2112:3296:15938_1:N: productive Homsap IGHV3-9*01 F 1016 95.07 212/223 nt Homsap IGHJ6*02 F 223 86.44 51/59 nt Homsap IGHD6-6*01 F 1 8 8 12 8.8.12 [3.17.38.11] CAKDKRNSHGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagataaaagaaactcgcacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1691 1690 M02948:180:000000000-JFBGH:1:2112:8627:17330_1:N: productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARGRDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaggggtagggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1692 1691 M02948:180:000000000-JFBGH:1:2112:17766:18044_1:N productive Homsap IGHV3-7*01 F 1025 95.52 213/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD4-23*01 ORF 3 8 8 21 8.8.21 [3.17.38.11] CARAASNVDTGGTPYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaactgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaaggactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagcagcctcaaacgtggatacgggggggacgccctactactactacggtatggacgtctggggccaaaggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1693 1692 M02948:180:000000000-JFBGH:1:2112:23487:19431_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*02 F 268 94.92 56/59 nt 8 8 11 8.8.11 [3.17.38.11] CARRDYYYGMDVW in-frame + aagggttttggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1694 1693 M02948:180:000000000-JFBGH:1:2112:26703:19698_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [2.17.38.11] CVGGIAAAAYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgtggggggtatagcagcagccgcatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1695 1694 M02948:180:000000000-JFBGH:1:2112:7540:19968_1:N: productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 8 17 8.8.17 [2.17.38.11] CTKVNGRRAVTGTGCSDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtacgaaagttaacgggcgaagagcagtaactggtacggggtgttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1696 1695 M02948:180:000000000-JFBGH:1:2112:14670:20123_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD1-14*01 ORF 1 8 8 8 8.8.8 [3.17.38.11] CASRGTFGSW in-frame + tgcggcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtgatagtggtagtagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagccggggtaccttcgggagttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1697 1696 M02948:180:000000000-JFBGH:1:2112:25211:22713_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKVYDSSGYAPQDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtgtatgatagtagtggttatgccccgcaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1698 1697 M02948:180:000000000-JFBGH:1:2112:19654:24725_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1073 98.64 217/220 nt Homsap IGHJ4*02 F 205 100.00 41/41 nt 8 7 5 8.7.5 [3.17.38.11] CARDDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagtggtggtagtatatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 330 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1699 1698 M02948:180:000000000-JFBGH:1:2111:10583:2401_1:N: productive Homsap IGHV2-5*02 F 1236 99.60 248/249 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD2-2*02 F 2 10 7 19 10.7.19 [11.17.38.11] CAHRTYCSSTSCYTDWYFDLW in-frame + acacagaccctcacgctgacctgcaccttctctgggttttcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacaccggacttattgtagtagtaccagctgctatacggactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 401 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1700 1699 M02948:180:000000000-JFBGH:1:2111:19655:5735_1:N: No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccacctcctggatcgcctgggtgcgccagatgcccgggaaaggcctggagtggctggggatcatctaccctggtgactctgaaaccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcaccaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgagggatattactatgataataattattatcgggcaaaatacttccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 322 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1701 1700 M02948:180:000000000-JFBGH:1:2111:21241:6554_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-24*01 ORF 3 8 8 10 8.8.10 [3.17.38.11] CARRRDSHFDYW in-frame + aagggttctggatacagcttgaccagttactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactatgataccagatacagtccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgaagagatagccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1702 1701 M02948:180:000000000-JFBGH:1:2111:6162:7424_1:N:0 productive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69D*01 F (see comment) 795 100.00 159/159 nt 99.37 158/159 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-6*01 F 2 8 5 13 8.5.13 [2.X.38.11] CASIAARPGYYFDYW in-frame + potentially, because of detected insertion/deletion the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (5 AA in M02948:180:000000000-JFBGH:1:2111:6162:7424_1:N:0; 8 AA in Homsap IGHV1-69*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release in FR2-IMGT, from codon 39 of V-REGION: 60 nucleotides (from position 31 in the user submitted sequence), (do not cause frameshift) gcttctggaggcaccttcagcagctatgctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcatagcagctcgtccagggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 293 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1703 1702 M02948:180:000000000-JFBGH:1:2111:15115:7603_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-2*02 F 2 8 7 21 8.7.21 [3.17.38.11] CARARFLGYCSSTSCYRNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagcccgatttctaggatattgtagtagtaccagctgctatagaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1704 1703 M02948:180:000000000-JFBGH:1:2111:28131:8256_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ4*03 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDFRGGITISGFDSW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaaaaactcactgtatctgcaaatgaacaccctgagagccgaggacacggctgtttattactgtgcgagagattttcggggcggtataacaataagtgggtttgactcctggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1705 1704 M02948:180:000000000-JFBGH:1:2111:19925:8689_1:N: productive Homsap IGHV1-69*04 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*09 F or Homsap IGHV1-69*10 F or Homsap IGHV1-69*14 F or Homsap IGHV1-69*17 F or Homsap IGHV1-69*20 (F) 987 94.52 207/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [2.17.38.11] CTGYCSSTSCPYYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtaccggatattgtagtagtaccagctgcccatattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1706 1705 M02948:180:000000000-JFBGH:1:2111:21086:8922_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARVRSSSWYGVEAYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtgcgcagcagcagctggtatggggtagaggcctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1707 1706 M02948:180:000000000-JFBGH:1:2111:13405:9558_1:N: productive Homsap IGHV1-18*01 F 1066 95.28 222/233 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-26*01 F 1 8 8 16 8.8.16 [6.17.38.11] CASGLVGAHNPGNAFDIW in-frame + aggtctcctgcaaggcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagcgggttagtgggagcccacaatcccggaaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1708 1707 M02948:180:000000000-JFBGH:1:2111:7391:10009_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-2*01 F 3 8 7 22 8.7.22 [3.17.38.11] CAEGPTARGLQTPFGHYYYGMDIW in-frame + cactgtctctggtggctccatcagtagttactattggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgccgaaggaccgactgctaggggtctacagaccccatttgggcactactactacggtatggacatctggggccaagggaccacggtcgccgtctcctcagagagtgcatccggcccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1709 1708 M02948:180:000000000-JFBGH:1:2111:16263:10405_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARDAGAAGSPLEIKNW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgcgggggcagcaggctccccccttgagattaagaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1710 1709 M02948:180:000000000-JFBGH:1:2111:12154:11626_1:N unproductive (see comment) Homsap IGHV3-23*03 F (see comment) 1046 97.27 214/220 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD2-2*01 F 2 8 7 X 8.7.X [3.17.38.11] CARGGL**YQLIL#YYYYYYYMDVW out-of-frame + rearranged sequence, stop codons the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (7 AA in M02948:180:000000000-JFBGH:1:2111:12154:11626_1:N; 8 AA in Homsap IGHV3-23*03): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaggggggttgtagtagtaccagctgatacttatattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 382 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1711 1710 M02948:180:000000000-JFBGH:1:2111:27178:12163_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-21*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARAVAYCGGDCYPAHYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcggtagcatattgtggtggtgattgctatcctgctcactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1712 1711 M02948:180:000000000-JFBGH:1:2111:26020:12413_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 987 94.52 207/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-10*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARGPSRDIYYYYGMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaccgtcccgagatatctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1713 1712 M02948:180:000000000-JFBGH:1:2111:14674:14199_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-22*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARDLGYDSSGYLAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatctcggctatgatagtagtggttatttagcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1714 1713 M02948:180:000000000-JFBGH:1:2111:8378:15133_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1145 100.00 229/229 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 3 8 8 17 8.8.17 [5.17.38.11] CASGQVRGALYYYYGMDVW in-frame + ctcctgtaagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtgggcaggttcggggagccctctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1715 1714 M02948:180:000000000-JFBGH:1:2111:16728:16104_1:N productive Homsap IGHV1-18*01 F 1023 96.35 211/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 8 8 18 8.8.18 [2.17.38.11] CASLTVTTPIGSYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagccttacagtaactaccccgattggtagctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1716 1715 M02948:180:000000000-JFBGH:1:2111:10324:16302_1:N unproductive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 255 91.67 55/60 nt Homsap IGHD3-10*01 F 2 8 7 X 8.7.X [3.17.38.11] CARDQ#YYYYMDVW out-of-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcgaacacggccgtgtattactgtgcgagagatcagggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1717 1716 M02948:180:000000000-JFBGH:1:2111:7132:18404_1:N: productive Homsap IGHV3-33*05 F 1043 96.41 215/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-21*01 F 3 8 8 19 8.8.19 [3.17.38.11] CARDMIAFPTPRDYYYYMDVW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagccgaggacacggccttgtatcactgtgcgagagacatgatcgcctttccgaccccgcgggactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagaaagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1718 1717 M02948:180:000000000-JFBGH:1:2111:21559:18951_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDKVAGYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagataaagtggctggatactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1719 1718 M02948:180:000000000-JFBGH:1:2111:4466:19065_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1050 97.72 214/219 nt Homsap IGHJ3*01 F 205 90.00 45/50 nt Homsap IGHD2-21*01 F 1 8 8 9 8.8.9 [2.17.38.11] CVRGFHSFDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgaacagcctgaaaaccgaggacacggccgtgtattattgtgttagaggattccactcttttgatgtctggggccaagggacattggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1720 1719 M02948:180:000000000-JFBGH:1:2111:22513:19782_1:N productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARDRYCSSTSCNLGYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgaggacacggccgtgtattactgtgcgagagatcgatattgtagtagtaccagctgcaatctagggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1721 1720 M02948:180:000000000-JFBGH:1:2111:24525:20905_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-9*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARTYYDILTGYPSYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaacgtattacgatattttgactggttatccctcctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1722 1721 M02948:180:000000000-JFBGH:1:2111:10235:21032_1:N productive (see comment) Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 954 93.52 202/216 nt 93.06 201/216 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD3-3*01 F 3 8 8 15 8.8.15 [2.16.38.11] CARRSVEWGVVNGMDVW in-frame + potentially, because of detected insertion/deletion other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) in FR2-IMGT, from codon 39 of V-REGION: 3 nucleotides (from position 31 in the user submitted sequence), (do not cause frameshift) gcatctggatacacgttcagcagctaccatcactgggtgcgacaggcccctggacaggggcttgagtggatgggaatcatcaaccctagtgatggtggcacaagttacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgaatacactctatatggagttgagcagcctgagatccgaggacacggccgtgtattactgtgcgagacgtagcgtggagtggggagtggttaacggtatggacgtctggggccaaggggccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1723 1722 M02948:180:000000000-JFBGH:1:2111:8839:21203_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARAPTGIESYWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatctacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagccccgacggggattgagagctactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1724 1723 M02948:180:000000000-JFBGH:1:2111:12650:21318_1:N productive Homsap IGHV4-61*01 F 1112 99.12 224/226 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 3 10 7 10 10.7.10 [3.17.38.11] CARVGEGAFDYW in-frame + cactgtctctggtggctccgtcagcagtggtacttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatccattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtaggtgagggagcgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1725 1724 M02948:180:000000000-JFBGH:1:2111:6544:21695_1:N: productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARGRSSTSSALGYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagggaggagtagtaccagctcggcgttgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1726 1725 M02948:180:000000000-JFBGH:1:2111:15214:21796_1:N productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1086 99.54 218/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [2.17.38.11] CAVAISSGWWAPVVYW in-frame + gcttctggattcacctttactagctctgctgtgcagtggatgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggtagcgattagcagtggctggtgggcccctgtcgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1727 1726 M02948:180:000000000-JFBGH:1:2111:15411:22112_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*02 F 2 8 8 17 8.8.17 [2.17.38.11] CAKSYCSSTSCYTGAIDYW in-frame + gcttctggttacacctttaccagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgaagtcatattgtagtagtaccagctgctatacgggagcgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1728 1727 M02948:180:000000000-JFBGH:1:2111:20663:23679_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARHKYGSNLNFDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacataagtatgggagcaaccttaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtacatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1729 1728 M02948:180:000000000-JFBGH:1:2111:11362:24404_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-23*01 ORF 3 8 8 11 8.8.11 [3.17.38.11] CARDPKGEPFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatcctaagggggaaccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1730 1729 M02948:180:000000000-JFBGH:1:2111:17823:25121_1:N unproductive (see comment) Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1114 98.26 226/230 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD3-22*01 F 2 10 9 15 10.9.15 [2.17.38.11] CARCYYDSSGYARMDVW in-frame + rearranged sequence, stop codons other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) ccatctccggggacagtgtcactaacaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactccctagggcacggctgtgtattactgtgcaagatgttattatgatagtagtggttatgcacgtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1731 1730 M02948:180:000000000-JFBGH:1:2110:6518:3130_1:N:0 productive Homsap IGHV1-2*02 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARLPSSRFGEGDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagactccccagttcacggttcggggagggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctatgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1732 1731 M02948:180:000000000-JFBGH:1:2110:15243:3163_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-10*02 F 1 10 7 17 10.7.17 [3.17.38.11] CARAPRGSGSKYYYYMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgcgggcaccacgaggttcggggagcaaatactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1733 1732 M02948:180:000000000-JFBGH:1:2110:12534:3534_1:N: productive Homsap IGHV3-30*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARDRAVAGDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgcgtattactgtgcgagagatcgagcagtggctggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1734 1733 M02948:180:000000000-JFBGH:1:2110:19503:4045_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-21*01 F 2 8 8 7 8.8.7 [3.17.38.11] CARVDWNYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtagattggaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1735 1734 M02948:180:000000000-JFBGH:1:2110:10064:4550_1:N: No rearrangement found Homsap IGHV1-8*01 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcctggccgggagtgcatccgctccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 296 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1736 1735 M02948:180:000000000-JFBGH:1:2110:10996:6413_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 750 100.00 150/150 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD3-3*01 F 2 X 8 13 X.8.13 [X.4.38.11] CARSSFWSGYGMDVW in-frame + tggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggtcttctttttggagtggctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 253 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1737 1736 M02948:180:000000000-JFBGH:1:2110:9145:6456_1:N:0 productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-14*01 ORF 1 8 8 12 8.8.12 [2.17.38.11] CARGEHHRITGDYW in-frame + gcttctggaggcaccttcagcagatatgctctcagctgggtgcgacaggcccctggacaagggcttgagtggatggaagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgcgcggggagcaccatcgaataaccggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1738 1737 M02948:180:000000000-JFBGH:1:2110:12009:7336_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARDLFVVVPAARDAFDIW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatctttttgtagtagtaccagctgctagggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1739 1738 M02948:180:000000000-JFBGH:1:2110:4743:7956_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1014 95.89 210/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-15*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARRGYCSGESCHSNAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgaaggcctcggacaccgccatctattactgtgcgagacgaggatattgtagtggtgagagttgccactcaaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1740 1739 M02948:180:000000000-JFBGH:1:2110:13298:8903_1:N: productive Homsap IGHV2-70*01 F 1245 100.00 249/249 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 2 10 7 19 10.7.19 [11.17.38.11] CARTVQTYYYGSGSTYYFDYW in-frame + acacagaccctcacactgacctgcaccttctctgggttctcactcagcactagtggaatgtgtgtgagctggatccgtcagcccccagggaaggccctggagtggcttgcactcattgattgggatgatgataaatactacagcacatctctgaagaccaggctcaccatctccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacgtattactgtgcacggacagtacaaacgtattactatggttcggggagtacgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 401 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1741 1740 M02948:180:000000000-JFBGH:1:2110:25887:9197_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-17*01 F 3 8 8 18 8.8.18 [3.17.38.11] CAREMLATVTTVYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagatgttagctacggtgactacggtctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1742 1741 M02948:180:000000000-JFBGH:1:2110:7818:9480_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 933 91.78 201/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [2.17.38.11] CATSSGSGWFPYYFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacttcatcgggcagtggctggttcccctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1743 1742 M02948:180:000000000-JFBGH:1:2110:19475:9945_1:N: productive Homsap IGHV3-7*03 F 1108 98.68 224/227 nt Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD5-24*01 ORF 2 8 8 11 8.8.11 [4.17.38.11] CASTGEGRWLQHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) cctgtgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagcactggggaagggagatggctacaacactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 324 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1744 1743 M02948:180:000000000-JFBGH:1:2110:11286:10330_1:N productive Homsap IGHV3-7*03 F 1106 99.55 222/223 nt Homsap IGHJ3*01 F 151 78.00 39/50 nt Homsap IGHD3-9*01 F 2 8 8 7 8.8.7 [3.17.38.11] CLKDYQGDW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtctattactgtttgaaggattaccagggggactggggccaagggacagtggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1745 1744 M02948:180:000000000-JFBGH:1:2110:7883:10895_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD4-23*01 ORF 2 8 8 15 8.8.15 [3.17.38.11] CAKGGPDYGGNRYFDYW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaaaagtgatgggagtagcacaagctacgcggactacgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtttctgcaaatgagcagtctgagagccgaggacacggctgtctattactgtgcaaaagggggccctgactacggtggaaaccgctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1746 1745 M02948:180:000000000-JFBGH:1:2110:8697:11144_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1059 98.17 215/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD3-10*01 F 2 8 8 17 8.8.17 [2.17.38.11] CATDGGGSSGNYPYYMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagcagttccagggcagagtcacaattaccagggacacatccgcgagcacagcctatatggagctgagcaccctgagatctgaagacacggctgtgtattactgtgcgacagatgggggtggaagttcggggaattacccctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1747 1746 M02948:180:000000000-JFBGH:1:2110:12686:11698_1:N productive Homsap IGHV3-21*04 F 1070 97.76 218/223 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-16*02 F 1 8 8 10 8.8.10 [3.17.38.11] CARALNDALDIW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtttattactgtgcgagagcgttaaacgatgctctcgatatctggggccaagggacagtggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1748 1747 M02948:180:000000000-JFBGH:1:2110:25768:12119_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-19*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARSWVPTKAVAGTYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggtcttgggtccccacgaaagcagtggctggtacctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1749 1748 M02948:180:000000000-JFBGH:1:2110:4534:12691_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-10*01 F 2 8 8 22 8.8.22 [3.17.38.11] CAKGRPDYYGSGVALYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtcccagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggcgccccgattactatggttcgggggtagccctatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1750 1749 M02948:180:000000000-JFBGH:1:2110:9634:12894_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARDSYYYDSSGSYYYGMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaatacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagattcctattactatgatagtagtggttcatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1751 1750 M02948:180:000000000-JFBGH:1:2110:18842:12946_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-15*01 F 1 8 8 14 8.8.14 [3.17.38.11] CASQWELPPYGAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctaataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagccagtgggagctgcccccttacggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1752 1751 M02948:180:000000000-JFBGH:1:2110:25157:13697_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAREGYSGGYNYFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacactgtatcttcaaatgcacagcctgagagccgaggacacggccgtgtattactgtgcgagagagggttatagtgggggctacaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1753 1752 M02948:180:000000000-JFBGH:1:2110:26607:14754_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 991 99.50 199/200 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 3 8 11 3.8.11 [X.17.38.11] CAKRSSSGWNDYW in-frame + gcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccctatattactgtgcgaaacggagtagcagtggctggaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 297 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1754 1753 M02948:180:000000000-JFBGH:1:2110:7895:14929_1:N: productive Homsap IGHV4-59*12 (F) 1082 99.09 218/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARADSSGYYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcgagagcggatagtagtggttattactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1755 1754 M02948:180:000000000-JFBGH:1:2110:14022:15394_1:N productive Homsap IGHV1-2*04 F 987 94.52 207/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD5-18*01 F 1 8 8 21 8.8.21 [2.17.38.11] CARWHFDTAMVESDEGLYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaattatgcacagaagtttcagggctgggtcaccatgaccagggacacgaccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgaggtggcactttgatacagctatggttgagtcggatgaaggcctttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1756 1755 M02948:180:000000000-JFBGH:1:2110:26594:16962_1:N productive Homsap IGHV4-61*08 F 1049 96.02 217/226 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-24*01 ORF 3 10 7 11 10.7.11 [3.17.38.11] CARDPGGAKFDYW in-frame + cactgtctctggtggctccatcagcagtggtggttactactggagctggatccgccagcacccagggaagggcctggagtggattgggtacatctattacagtgggagcaccaactacaacccctccctcaagagtcgactcaccatatcagcagacacgtccaagaaccagttctccctgaggctgaactctgtgaccgctgcggacacggccgtgtattactgtgcgcgagatccggggggcgccaaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1757 1756 M02948:180:000000000-JFBGH:1:2110:10017:18486_1:N productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 910 100.00 182/182 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD1-26*01 F 2 X 8 11 X.8.11 [X.14.38.11] CAREGAQWELQDW in-frame + gggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagagggggcgcagtgggagctacaagactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 279 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1758 1757 M02948:180:000000000-JFBGH:1:2110:2954:18827_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD4-23*01 ORF 2 8 7 18 8.7.18 [3.17.38.11] CARAADYGGYIYYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagctgccgactacggtggatatatctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1759 1758 M02948:180:000000000-JFBGH:1:2110:13908:19052_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARAVVPAAILFFHYYMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagcggtagtaccagctgctattctgtttttccactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1760 1759 M02948:180:000000000-JFBGH:1:2110:11772:19252_1:N productive Homsap IGHV3-48*02 F, or Homsap IGHV3-48*04 F 1025 95.52 213/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-3*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARAEEFGGEGYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatatattagtagtaatagtaataccgtctactacgcagacttagtgaagggccgattgaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagacgacgacacggctgtgtattactgtgcgagagccgaggaatttggaggggaaggttactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1761 1760 M02948:180:000000000-JFBGH:1:2110:10374:19291_1:N productive Homsap IGHV1-18*01 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARASRSGSYRGNWFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcctctcgttcggggagttatcgggggaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1762 1761 M02948:180:000000000-JFBGH:1:2110:28248:19351_1:N productive Homsap IGHV3-21*04 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 2 8 8 8 8.8.8 [3.17.38.11] CATGGHVDYC in-frame + TRP 118 not identified tgcagcctctggattcaccttcagtggctctgctatgcactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagaaccgaggacacggccatgtattactgtgcgaccggaggtcacgttgactactgcggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1763 1762 M02948:180:000000000-JFBGH:1:2110:26578:19364_1:N productive Homsap IGHV3-73*01 F, or Homsap IGHV3-73*02 F 1010 93.45 214/229 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-10*01 F 2 8 10 12 8.10.12 [3.17.38.11] CTRDAGSYNWLDPW in-frame + tgcagcctctgggttcaccttcagcgactgtgctatacactgggtccgccaggcttccgggaaagggctggagtgggttggccatattaacatcaaaggtaacaattacgcgacagcatttgctgcgtcggtgaaaggcaggttcaccatctccagagaagattcaaagaacacggcgtatctgcaaatgaatagcctgaaaattgaggacacggccgtgtattactgtacccgcgacgcggggagttataactggctcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1764 1763 M02948:180:000000000-JFBGH:1:2110:26727:19693_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 1 8 8 17 8.8.17 [3.17.38.11] CARPERRGYSSGWYEFGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacctgagaggcgggggtatagcagtggctggtacgagttcggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1765 1764 M02948:180:000000000-JFBGH:1:2110:27548:20040_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-18*01 F 1 8 8 17 8.8.17 [3.17.38.11] CARDQVNTAIDYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcaggtgaatacagctatagactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1766 1765 M02948:180:000000000-JFBGH:1:2110:10091:20775_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-21*01 F 2 8 8 7 8.8.7 [3.17.38.11] CARVDWNYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtagattggaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1767 1766 M02948:180:000000000-JFBGH:1:2110:17611:20864_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARDRVRGVLDYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatcgggttcggggagtccttgactactggggccagggaaccctggtcaccgtctcctctgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1768 1767 M02948:180:000000000-JFBGH:1:2110:23443:22564_1:N unproductive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 3 8 8 X 8.8.X [2.17.38.11] CARAGVLWFGEL#DYW out-of-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcaggggtactatggttcggggagttattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 355 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1769 1768 M02948:180:000000000-JFBGH:1:2110:15398:23540_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD3-3*01 F 1 8 8 20 8.8.20 [3.17.38.11] CARHSIGFLRFLGKNYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatagtatcgggtttttacgatttttggggaagaactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1770 1769 M02948:180:000000000-JFBGH:1:2110:10291:24867_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1073 98.64 217/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-16*01 F 1 8 7 13 8.7.13 [3.17.38.11] CAREKLRVAAYFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggccttgtattactgtgcgagagaaaaattgcgtgtggctgcctactttgactactggggccagggatccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1771 1770 M02948:180:000000000-JFBGH:1:2109:8773:2227_1:N:0 productive Homsap IGHV4-34*03 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-17*01 F 3 8 7 16 8.7.16 [3.17.38.11] CARDSSVTTGIVHYFDYW in-frame + cactgtctctggtggctccatcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaattaatcatagtggaagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattcttcggtgactacgggtattgtccactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1772 1771 M02948:180:000000000-JFBGH:1:2109:13960:2996_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD4-23*01 ORF 2 8 8 13 8.8.13 [2.17.38.11] CAISGGYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgatctccggtggctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1773 1772 M02948:180:000000000-JFBGH:1:2109:8060:3278_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1064 98.18 216/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARVGEGAFDYW in-frame + cactgtctctggtgtctccatcagtagttattactggagctggatccggcagcccccagggaagggactggagtggattgggtatatccataacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtaggtgagggagcgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1774 1773 M02948:180:000000000-JFBGH:1:2109:6844:5152_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARGELLHTLFDYW in-frame + aagggttctggatacagcattaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccggcaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggcgagctgctacatactctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1775 1774 M02948:180:000000000-JFBGH:1:2109:26256:5828_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-24*01 ORF 1 8 8 15 8.8.15 [2.17.38.11] CARDRSVEMATPFFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatagatcagtagagatggctacaccattttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1776 1775 M02948:180:000000000-JFBGH:1:2109:22857:6263_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1010 95.45 210/220 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARGRGDYGDYYRFDYW in-frame + other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtccttcagtgattactactggacctggatccgccagcccccagggaagggactggagtggattggggaaatcaatcatagtggagacaccaagtgcaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaacttgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgaggtgactacggtgactactatcgctttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1777 1776 M02948:180:000000000-JFBGH:1:2109:7928:6414_1:N:0 productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARVYCSGGSCYPDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtgtattgtagtggtggtagctgctacccagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1778 1777 M02948:180:000000000-JFBGH:1:2109:16529:7109_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-24*01 ORF 1 8 8 23 8.8.23 [3.17.38.11] CARHLRATSSREMATIYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatttacgagcaacgtcgtcaagggagatggctacaatttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1779 1778 M02948:180:000000000-JFBGH:1:2109:15697:7232_1:N: productive Homsap IGHV3-30*20 (F) 1079 98.21 219/223 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD2-21*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARDLGGGDDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcaccttcagtagctctggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagcaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagatcttggcggtggtgacgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1780 1779 M02948:180:000000000-JFBGH:1:2109:3230:8061_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1011 95.05 211/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-22*01 F 2 8 8 26 8.8.26 [3.17.38.11] CASHIQYYYDSSGYYFGGPSPEDAFDIW in-frame + aagggttctggttacagttttaccaactactggatcggctgggtgagccagatgcccgggaaaggcctggagtggctggggatcatctaccctagtgactctgaaaccagatacagcccgtccttccaaggccaggtctacatctcagtcgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtcatatacagtattactatgatagtagtggttattactttgggggtccgtcccccgaagatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctccttgagaattcccctcgcgatat 0 0 394 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1781 1780 M02948:180:000000000-JFBGH:1:2109:24076:8123_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 1 8 8 20 8.8.20 [2.17.38.11] CARDKAPSSSWYGGSLVSIDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcagacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagataaggcaccgagcagcagctggtatggggggtctttggtgtcgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1782 1781 M02948:180:000000000-JFBGH:1:2109:3832:9844_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARLGEGYSGSWDPFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactaggggaggggtatagtgggagctgggacccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1783 1782 M02948:180:000000000-JFBGH:1:2109:27125:9855_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 971 92.83 207/223 nt Homsap IGHJ4*02 F (see comment) 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 11 8.8.11 [3.17.38.11] CSKGARSVNFDPW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctccggattcacctttagcgactatagcatgagctgggtccgccaggctccagcgaaggggctggagtgggtctcatctattagtagtcgtggtggtgacacatactacgcagactccgtgaagggccggttcaccatctccagagacaactccaagaacactctgtatctgcaactgagcagtctgagagccgaggacacggccgtatattactgttcgaagggtgcacgtagtgtcaacttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1784 1783 M02948:180:000000000-JFBGH:1:2109:11534:10139_1:N productive Homsap IGHV3-30*07 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-19*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARRAVAGRGGYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaagagcagtggctgggagaggagggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1785 1784 M02948:180:000000000-JFBGH:1:2109:6831:10636_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD4-23*01 ORF 3 8 8 13 8.8.13 [3.17.38.11] CARRTVGAYRYFDLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaagaacggtgggtgcctatcggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1786 1785 M02948:180:000000000-JFBGH:1:2109:20948:11297_1:N productive Homsap IGHV4-38-2*01 F (see comment) 1001 95.00 209/220 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-3*01 F 1 8 7 16 8.7.16 [3.17.38.11] CARGRVWVWWSGNWFDPW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR1-IMGT amino acid lengths (8 AA in M02948:180:000000000-JFBGH:1:2109:20948:11297_1:N; 9 AA in Homsap IGHV4-38-2*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cgctgtctatggtgggtccttcagtggttactactggggctggatccggcagcccccagggaaggggctgcagtggattgggagtatctatcatagtgggagcacctactacagcccgtccctcaggggtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggtcgcgtttgggtgtggtggtccggcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1787 1786 M02948:180:000000000-JFBGH:1:2109:14812:11681_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-16*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGGSKYYHYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgatatcagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacagcgccatgtattactgtgcgagagggggatcaaaatactaccactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1788 1787 M02948:180:000000000-JFBGH:1:2109:8987:13187_1:N: productive Homsap IGHV3-48*03 F 989 93.72 209/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CVASLSGWYNDGMDVW in-frame + tgcagcctctggattcaccttcgggagttacgaaatgagttgggtccgccaggctccgggggaggggctggagtgggtttcatacattaggagtgatggtggtaccacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtctatcactgtgttgctagtctcagtggctggtacaacgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1789 1788 M02948:180:000000000-JFBGH:1:2109:3877:13598_1:N: productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKDMRLYSGSFEPDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatatgcggctgtatagtgggagcttcgaacctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1790 1789 M02948:180:000000000-JFBGH:1:2109:28835:13689_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 2 8 8 14 8.8.14 [2.17.38.11] CATNMAGIAVALIDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaaacatggccggtatagcagtggctcttatcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1791 1790 M02948:180:000000000-JFBGH:1:2109:26162:13857_1:N productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDGGGEGDYNYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatggggggggggagggagattataactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1792 1791 M02948:180:000000000-JFBGH:1:2109:8750:13895_1:N: productive Homsap IGHV1-46*04 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD4-11*01 ORF 2 8 8 15 8.8.15 [2.17.38.11] CARDLDYTPPSGAFDIW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttgcagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatttagactacacccctccgtcgggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1793 1792 M02948:180:000000000-JFBGH:1:2109:3791:14208_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F (see comment) 179 82.69 43/52 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CASQAVAGNMRYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagccaagcagtggctggtaacatgaggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1794 1793 M02948:180:000000000-JFBGH:1:2109:17452:14328_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD6-19*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARKAGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaaggctgggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1795 1794 M02948:180:000000000-JFBGH:1:2109:2437:14767_1:N: productive Homsap IGHV4-38-2*01 F (see comment) 782 83.41 186/223 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD1-26*01 F 2 9 7 12 9.7.12 [3.17.38.11] CARVHQSGHAVDIW in-frame + low V-REGION identity (83.41%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cgttgtcattggttcacccatcggcagtaattcttactgggcctggatgcggcagttcccagggacgggactggagtggattggcagtggcaaccatgatgggagcaccttctacaacccgtccctcaagagtcgagtcaccatatcggtagacatgtccaagaacttggtctccctgaaactgaactccgtaaccgccgcagacacggccgtctattcgtgtgcgagagttcatcagtcggggcatgctgttgatatctggggcgaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1796 1795 M02948:180:000000000-JFBGH:1:2109:11081:15281_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1061 97.31 217/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-10*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARARSTTMVRGVINPDAFDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagcccgttctactactatggttcggggagttatcaaccctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1797 1796 M02948:180:000000000-JFBGH:1:2109:21825:15651_1:N productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-24*01 ORF 3 8 8 11 8.8.11 [3.17.38.11] CAREGGGYNPDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaaggtggtggctacaaccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1798 1797 M02948:180:000000000-JFBGH:1:2109:16741:17326_1:N productive Homsap IGHV3-30*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-16*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARSGGIMTYDDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagaagcggggggataatgacttacgatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1799 1798 M02948:180:000000000-JFBGH:1:2109:13188:17645_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARVDKNYYDSSGYHFDFW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaagagtggataagaattactatgatagtagtggttaccattttgacttctggggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1800 1799 M02948:180:000000000-JFBGH:1:2109:25065:18068_1:N productive Homsap IGHV1-8*02 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*02 F 1 8 8 14 8.8.14 [2.17.38.11] CARETFSESGSAPDYW in-frame + gcttctggatacaccttcaccagctatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctatatggagttgaggagcctgagatctgacgacacggccgtgtattactgtgcaagagaaacattttcggagtcggggagtgcccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1801 1800 M02948:180:000000000-JFBGH:1:2109:6032:18209_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*02 F 2 8 8 15 8.8.15 [2.17.38.11] CARAPRCTSCYTLFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgccgcgttgtaccagctgctataccctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1802 1801 M02948:180:000000000-JFBGH:1:2109:13022:18800_1:N productive Homsap IGHV1-18*01 F 1014 95.89 210/219 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD3-3*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARVKGFLEWLMPKYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccaactatggtctcaactgggtgcgacaggcccctggacacgggcttgagtggatgggatggatcagcggttacgatggtgacacaaactatgcacagaagttccagggcagagtcaccatgaccacagacacatctacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtgaagggatttttggagtggttaatgcctaaatactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1803 1802 M02948:180:000000000-JFBGH:1:2109:5690:18856_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARASLSDCSGGSCYSYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgagtttaagtgattgtagtggtggtagctgctacagttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1804 1803 M02948:180:000000000-JFBGH:1:2109:9827:19060_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1037 96.82 213/220 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-16*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARVSRYEGGGAMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtggttattactggagctggatccggcagcccccagggaagggactggagtggattggctatatctattacagtgggagcaccaactacaatccctccctcaagagtcgagtcaccatatcagtagacacgaccaagaaccagttctccctgaaggtgagctctgtgaccgctgcggacacggccgtgtattcctgtgcgagagtttcaaggtatgagggaggcggcgctatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1805 1804 M02948:180:000000000-JFBGH:1:2109:24952:19265_1:N unproductive (see comment) Homsap IGHV3-7*03 F 1192 99.17 240/242 nt Homsap IGHJ2*01 F 202 86.79 46/53 nt Homsap IGHD3-3*01 F 2 8 8 16 8.8.16 [9.17.38.11] CARDSGVDFWSGG*FDLW in-frame + rearranged sequence, stop codons ggtccctgagactctcctgtgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggccggagtgggtggccaacataaaccaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagattctggggtcgatttttggagtgggggttagttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1806 1805 M02948:180:000000000-JFBGH:1:2109:14153:19300_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1010 95.45 210/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-13*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARGGSSWYSDDAFDIW in-frame + cgctgtctatggtgggtccttcagtgattactactggacctggatccgccagcccccagggaagggactggagtggattggggaaatcaatcatagtggagacaccaagtgcaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaacttgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgggagcagctggtactccgatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1807 1806 M02948:180:000000000-JFBGH:1:2109:22318:20500_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-1*01 F 1 8 8 11 8.8.11 [3.17.38.11] CASGVTSDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatatattactgtgcgtctggggtgacgtccgatgcttttgatatctggggcctagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1808 1807 M02948:180:000000000-JFBGH:1:2109:23071:22983_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD6-13*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARCRSWYRGRDWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagatgccgcagctggtatcgagggagggactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1809 1808 M02948:180:000000000-JFBGH:1:2109:18810:23493_1:N productive Homsap IGHV1-18*01 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD5-12*01 F 1 8 8 27 8.8.27 [2.17.38.11] CARDWEDRTGATINTGHTDTVTKSGVNDW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggctacacctttatcagctatggtctcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcaccgaagctccagggcagagtcaccatgaccagagacacatccacgaggacagtctatatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagattgggaggatagaaccggggctacgattaatacgggacatactgatacggtgactaagagtggggttaacgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 395 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1810 1809 M02948:180:000000000-JFBGH:1:2108:17399:2396_1:N: productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CASSPDSGSYLDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagcagccccgatagtgggagctaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1811 1810 M02948:180:000000000-JFBGH:1:2108:13765:4262_1:N: productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARDRQEYDFWGGYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacatcagtagtagtggtagtaccatatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatcggcaagagtacgatttttgggggggatactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1812 1811 M02948:180:000000000-JFBGH:1:2108:16159:6325_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-19*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARVYSSGWYAGLGWFDPW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtctatagcagtggctggtacgcaggactaggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1813 1812 M02948:180:000000000-JFBGH:1:2108:17720:6833_1:N: unproductive (see comment) Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F (see comment) 612 82.22 148/180 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD1-1*01 F 3 X 8 9 X.8.9 [X.14.38.11] CARYVGWFDPW in-frame + rearranged sequence, stop codons low V-REGION identity (82.22%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ctatgcgccttgccagcccgctcagatacgacgtagggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagatacgtcgggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 271 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1814 1813 M02948:180:000000000-JFBGH:1:2108:16404:7179_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD1-26*01 F 1 8 8 11 8.8.11 [3.17.38.11] CAKAFGVGATEAW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaacacgctgtatctgcaaatggacagcctgagagccgaagacacggccatatattactgtgcgaaagcgttcggggtgggagctactgaggcgtggggtcagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1815 1814 M02948:180:000000000-JFBGH:1:2108:10088:7522_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARAPRSSGWYSYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagcacctcgtagcagtggctggtattcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1816 1815 M02948:180:000000000-JFBGH:1:2108:27534:9109_1:N: unproductive (see comment) Homsap IGHV3-30*07 F, or Homsap IGHV3-30*12 F (see comment) 447 76.28 119/156 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD5-18*01 F 3 X 8 12 X.8.12 [X.6.38.11] CARDSGYSYGSGYW in-frame + rearranged sequence, stop codons low V-REGION identity (76.28%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ctatgcgccttgccagcccgctcagcatagtagtggggaattctcacaggagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaagtgaccagcctgacagccgaggacacggctgtgtattactgtgcgagagattcaggatacagttatggtagcggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 256 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1817 1816 M02948:180:000000000-JFBGH:1:2108:6466:9716_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD1-1*01 F 2 8 8 13 8.8.13 [2.17.38.11] CAANRLEDPDAFDIW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggcaaatcgactggaagatcccgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1818 1817 M02948:180:000000000-JFBGH:1:2108:24975:9793_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARDRYYGSGSYSFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatcgctattatggttcggggagttattcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1819 1818 M02948:180:000000000-JFBGH:1:2108:12100:9921_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD3-10*01 F 3 8 7 21 8.7.21 [3.17.38.11] CARGRGITMVRGVIGRVYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcagggggattactatggttcggggagttatcgggagggtctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1820 1819 M02948:180:000000000-JFBGH:1:2108:21456:10091_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD4-23*01 ORF 3 8 8 12 8.8.12 [3.17.38.11] CARRLTMMESFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggctgactatgatggagtcttttgatatctggggccaagggacaatggtcaccgtcttttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1821 1820 M02948:180:000000000-JFBGH:1:2108:21863:10136_1:N unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 964 93.58 204/218 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-21*02 F 2 8 8 21 8.8.21 [1.17.38.11] CARGAYCGGDCYRDYYYYGMDVW in-frame + rearranged sequence, stop codons gcttctgaagcaccttcagcagctatgctatccgccgggtgccaccggccccttgacaaggtcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacggaaccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggcatattgtggtggtgactgctatagggactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 376 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1822 1821 M02948:180:000000000-JFBGH:1:2108:28839:10903_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-12*01 F 3 8 8 20 8.8.20 [2.17.38.11] CATVVGYSGYDLEGPSYYFDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagtggttggatatagtggctacgatctcgaggggccctcgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1823 1822 M02948:180:000000000-JFBGH:1:2108:3093:11331_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1065 97.75 217/222 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD4-17*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARHRTYGDLQFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatcggacctacggtgatctacagttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1824 1823 M02948:180:000000000-JFBGH:1:2108:17317:11811_1:N productive (see comment) Homsap IGHV1-24*01 F 990 100.00 198/198 nt 99.49 197/198 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-16*01 F 2 8 8 12 8.8.12 [2.17.31.11] CATRGYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 73 of V-REGION: 21 nucleotides (from position 127 in the user submitted sequence), (do not cause frameshift) gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaaccagggggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1825 1824 M02948:180:000000000-JFBGH:1:2108:7205:11879_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-10*01 F 2 8 7 21 8.7.21 [3.17.38.11] CARNFGGSGSYYRTYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaaattttggtggttcggggagttattatcgtacctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1826 1825 M02948:180:000000000-JFBGH:1:2108:24150:12539_1:N productive Homsap IGHV3-7*03 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-17*01 F 2 8 8 11 8.8.11 [3.17.38.11] CAKPYGDYHNDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaccgtacggtgactaccacaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1827 1826 M02948:180:000000000-JFBGH:1:2108:24562:13005_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD1-1*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAREIHNWNHAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagagattcacaactggaatcatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1828 1827 M02948:180:000000000-JFBGH:1:2108:10791:13569_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 235 100.00 47/47 nt 8 8 6 8.8.6 [2.17.38.11] CASAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 332 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1829 1828 M02948:180:000000000-JFBGH:1:2108:9374:14397_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-13*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARAQDISSPPQGYW in-frame + gcttctggttacacctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagcacaggatatcagcagtcccccccaaggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1830 1829 M02948:180:000000000-JFBGH:1:2108:6092:15114_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-11*01 ORF 2 8 8 16 8.8.16 [3.17.38.11] CARHTGPFLYSKQLPDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatacgggccccttcctctacagtaaacaactacctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1831 1830 M02948:180:000000000-JFBGH:1:2108:25817:15302_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CAREISGSLWFDPW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagataagtgggagcttatggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1832 1831 M02948:180:000000000-JFBGH:1:2108:26742:15701_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-19*01 F 2 10 7 20 10.7.20 [3.17.38.11] CARDIAVAGLHGIYYYYGMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagacatagcagtggctggcctacacgggatttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1833 1832 M02948:180:000000000-JFBGH:1:2108:9936:16981_1:N: productive Homsap IGHV4-59*12 (F) 1082 99.09 218/220 nt Homsap IGHJ6*03 F (see comment) 238 87.10 54/62 nt Homsap IGHD5-12*01 F 3 8 7 15 8.7.15 [3.17.38.11] CARGSGYVSNYYYMDIW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcagtggctacgtatcgaactactactacatggacatctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1834 1833 M02948:180:000000000-JFBGH:1:2108:10831:17924_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1041 97.26 213/219 nt Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [2.17.38.11] CAREYGDYVWLVDW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggaattgagcagcctgacatctgaagacacggccgtctattattgtgcgagggagtacggtgactatgtatggctggtcgactggggccagggaaccccggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1835 1834 M02948:180:000000000-JFBGH:1:2108:24234:18660_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 996 94.98 208/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD6-19*01 F 2 8 8 14 8.8.14 [2.17.38.11] CAREARAPYYYGMDVW in-frame + acttctggttacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggctggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggaggcacgggccccctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1836 1835 M02948:180:000000000-JFBGH:1:2108:4629:20300_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 1 8 8 18 8.8.18 [3.17.38.11] CAKVTVDQLLIYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtgacggtggaccagctgctaatctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctatgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1837 1836 M02948:180:000000000-JFBGH:1:2108:13163:21621_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1056 97.30 216/222 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD6-6*01 F 1 8 8 14 8.8.14 [3.17.38.11] CASGRSSSFNWYFDLW in-frame + aagggttctggatacagttttgtcgactattggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagcgggcgcagctcgtctttcaactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1838 1837 M02948:180:000000000-JFBGH:1:2108:14349:21840_1:N productive Homsap IGHV3-48*04 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARDSYYYDSSGLPPDYW in-frame + tgcagcctctggattcacctttagtagctatgccgtgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagggactcttattactatgatagtagtggactccctccggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1839 1838 M02948:180:000000000-JFBGH:1:2108:12225:21920_1:N productive Homsap IGHV3-48*03 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-12*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARDEGSWKVERMNYW in-frame + tgtagcctctggattcagcttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggccggagtgggtctcagctattagtggtagtggtggtggcacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgaggggagttggaaagtggagaggatgaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1840 1839 M02948:180:000000000-JFBGH:1:2108:8584:21970_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-12*01 F 2 8 7 11 8.7.11 [3.17.38.11] CARAKWLRLPDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagccaagtggctacgcctaccggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1841 1840 M02948:180:000000000-JFBGH:1:2108:19979:23276_1:N productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD1-26*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARDRRVGATILYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcgcagggtgggagctactatactgtacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1842 1841 M02948:180:000000000-JFBGH:1:2107:7335:4631_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1056 97.30 216/222 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD5-18*01 F 1 8 8 11 8.8.11 [3.17.38.11] CASRAGVGWFDPW in-frame + gcagcctctggattcacctttaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtagagctggggtgggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1843 1842 M02948:180:000000000-JFBGH:1:2107:16136:6434_1:N: No rearrangement found Homsap IGHV4-59*12 (F) 1091 99.55 219/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgtggtggtcccacgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 295 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1844 1843 M02948:180:000000000-JFBGH:1:2107:15990:6649_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD6-13*01 F 1 8 8 15 8.8.15 [3.17.38.11] CAREHSSSWYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaacatagcagcagctggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1845 1844 M02948:180:000000000-JFBGH:1:2107:7676:6657_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-21*02 F 3 8 7 11 8.7.11 [3.17.38.11] CARRRETHWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgagagcaccaactacaacccctccctcaagagtcgagccaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaaggagggagactcactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1846 1845 M02948:180:000000000-JFBGH:1:2107:19553:7501_1:N: productive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F or Homsap IGHV3-21*05 (F) (see comment) 957 96.57 197/204 nt 96.08 196/204 nt Homsap IGHJ3*02 F 160 80.00 40/50 nt Homsap IGHD6-25*01 F 2 8 4 11 8.4.11 [3.14.38.11] CASGPEKGIAAIW in-frame + potentially, because of detected insertion/deletion the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (4 AA in M02948:180:000000000-JFBGH:1:2107:19553:7501_1:N:; 8 AA in Homsap IGHV3-21*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release in FR2-IMGT, from codon 53 of V-REGION: 19 nucleotides (from position 79 in the user submitted sequence), (cause frameshift) tgcagcctctggattcaccttcagtacctatgctatgcactgggtccgccaggctccaggcaaggggctggagtgggtggtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagcggccccgaaaaaggtatagccgcgatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 332 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1847 1846 M02948:180:000000000-JFBGH:1:2107:6497:9552_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 172 85.11 40/47 nt Homsap IGHD6-19*01 F 2 8 8 7 8.8.7 [2.17.38.11] CATEGGDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagagggtggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1848 1847 M02948:180:000000000-JFBGH:1:2107:6053:9607_1:N:0 productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARGARGYYYDSSGYYSNW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgagaacacggccgtgtattactgtgcgagaggtgcgagaggctattactatgatagtagtggttattactccaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1849 1848 M02948:180:000000000-JFBGH:1:2107:7606:10670_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-23*01 ORF 2 8 7 14 8.7.14 [3.17.38.11] CARSDYGDNLYYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagatctgactacggtgataatttatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1850 1849 M02948:180:000000000-JFBGH:1:2107:18879:11142_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-23*01 ORF 3 8 8 12 8.8.12 [3.17.38.11] CARDSRTTGEFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagatagtaggactacgggggaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1851 1850 M02948:180:000000000-JFBGH:1:2107:5800:11231_1:N: productive Homsap IGHV3-7*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD4-17*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARDLVTTDPLGADYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatttggtgactacggacccgttgggagcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1852 1851 M02948:180:000000000-JFBGH:1:2107:6481:11542_1:N: productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-15*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARDFPTLNDW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagacttccccaccctgaacgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1853 1852 M02948:180:000000000-JFBGH:1:2107:20410:11745_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD3-3*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARLDYDFWSGQLDRYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagattggattacgatttttggagtggtcaactagaccgttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1854 1853 M02948:180:000000000-JFBGH:1:2107:25595:11860_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARPESYDSSGYYRDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccggagagttatgatagtagtggttattaccgtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1855 1854 M02948:180:000000000-JFBGH:1:2107:20902:11916_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-1*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARDGRTGTTRKYFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagacggacgaactggaacgaccagaaagtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1856 1855 M02948:180:000000000-JFBGH:1:2107:9415:12112_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD5-12*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARHSVSGIEWLRFGYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattcggtgtccgggatagagtggctacgatttgggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1857 1856 M02948:180:000000000-JFBGH:1:2107:2696:12294_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 971 92.83 207/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-26*01 F 3 8 8 10 8.8.10 [3.17.38.11] CAKYSGNYIDYW in-frame + tgcagcctctggattcacctttagcaactatgacatgaactgggtccgccaggctccggggaaggggctggagtgggtctcaggtattagtggcagcggtgctgtcacatactacgcagactccgtgaagggccggttcaccatctccagagacaactccaaggacactctgtatctgcaaatgaacagcctgagagccgaggacacggccgaatacttctgtgcgaagtatagtgggaactacattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1858 1857 M02948:180:000000000-JFBGH:1:2107:28575:13078_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 996 94.98 208/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARATCSTSCLNWFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagcgacgtgtagtaccagctgccttaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1859 1858 M02948:180:000000000-JFBGH:1:2107:3103:15290_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-3*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARNEGGVNRYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgaggtgggtccgccaggttccagggaaggggctggagtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagaaacgagggaggggtgaatcgatactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1860 1859 M02948:180:000000000-JFBGH:1:2107:2394:17200_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 942 92.24 202/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [2.17.38.11] CAREMGGTFNFDYW in-frame + gcatctggatacaccttcaccagttacttaatacactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctggtgataattacataaactacgcacagaaattccaggacagagtcaccatgaccagggacacgtccacgagcacagtctacatggatctgagcagcctgagatctgaagacacggccgtgtattattgtgcgagagaaatgggaggtaccttcaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1861 1860 M02948:180:000000000-JFBGH:1:2107:15572:17728_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREYYYDSSGYYSDW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagagtattactatgatagtagtggttattactccgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1862 1861 M02948:180:000000000-JFBGH:1:2107:27669:17794_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARLEYGSGSYRYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggctcgaatatggttcggggagttatcgctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1863 1862 M02948:180:000000000-JFBGH:1:2107:4929:18817_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-3*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDMGWLLASPGYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatatggggtggttattagcctcccctgggtactggggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1864 1863 M02948:180:000000000-JFBGH:1:2107:22730:18927_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-10*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARGSWFGGYYNWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggtcatggtttgggggctattacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1865 1864 M02948:180:000000000-JFBGH:1:2107:19138:21159_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD6-6*01 F 1 8 8 17 8.8.17 [3.17.38.11] CARRGGGKYSLDYNWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggggggggggcaagtacagcctagattacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1866 1865 M02948:180:000000000-JFBGH:1:2107:23139:21421_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-13*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARRLPGIAAAGEAKDDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgccttccgggtatagcagcagctggtgaagccaaagatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1867 1866 M02948:180:000000000-JFBGH:1:2106:17593:4108_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARGALGQLLPFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggccctgggccagctgctcccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1868 1867 M02948:180:000000000-JFBGH:1:2106:25291:4865_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-18*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARPGISYGAYYFDYW in-frame + gcttttggaggcaccttcagctgctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaccagggatcagctatggcgcttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1869 1868 M02948:180:000000000-JFBGH:1:2106:12649:6031_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD4-11*01 ORF 2 8 8 23 8.8.23 [3.17.38.11] CARHRVPPGKTYSKHLEIYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaccgtgttccccccgggaagacctacagtaaacatctggagatctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1870 1869 M02948:180:000000000-JFBGH:1:2106:3727:7646_1:N:0 productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-17*01 F 1 8 8 9 8.8.9 [2.17.38.11] CARGLGPGDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaaaggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggactagggcccggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1871 1870 M02948:180:000000000-JFBGH:1:2106:14680:7743_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-26*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARDRHSGSYYEVDNWFDPW in-frame + gcttctggttacacctttaccagctatggtatcatctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcggcatagtgggagctactatgaggtggacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1872 1871 M02948:180:000000000-JFBGH:1:2106:25959:8040_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARHMSSGYYSPSDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatatgagtagtggttattacagcccttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1873 1872 M02948:180:000000000-JFBGH:1:2106:13651:8177_1:N: unproductive (see comment) Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1047 96.85 215/222 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-16*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGGSKYYHYMDVW in-frame + rearranged sequence, stop codons aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttcgaaggccacgtcaccatctcagccgacaagtccatcagtaccgcctacctgtagtggagcagcctgaaggcctcggacagcgccatgtattactgtgcgagagggggatcaaaatactaccactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1874 1873 M02948:180:000000000-JFBGH:1:2106:13297:9236_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-19*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARLGSGWYTSGLGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagactcggcagtggctggtacacttcggggttaggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1875 1874 M02948:180:000000000-JFBGH:1:2106:12206:9833_1:N: productive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*05 F or Homsap IGHV1-69*06 F or Homsap IGHV1-69*10 F or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*14 F or Homsap IGHV1-69*17 F or Homsap IGHV1-69*19 F or Homsap IGHV1-69D*01 F 755 100.00 151/151 nt 99.34 150/151 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 3 8 1 22 8.1.22 [2.17.22.11] CARAGDIVVVPAASSYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 57 of V-REGION: 68 nucleotides (from position 86 in the user submitted sequence), (cause frameshift) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagctggggatattgtagtagtaccagctgctagttcttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 312 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1876 1875 M02948:180:000000000-JFBGH:1:2106:9225:9956_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [2.17.38.11] CAEGSYDSSGYHFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggaaggaagctatgatagtagtggttaccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1877 1876 M02948:180:000000000-JFBGH:1:2106:21355:12263_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 1 8 7 14 8.7.14 [3.17.38.11] CATDVMSSSWYYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaccgacgtgatgagcagcagctggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1878 1877 M02948:180:000000000-JFBGH:1:2106:27502:12871_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ4*03 F (see comment) 177 85.42 41/48 nt Homsap IGHD2-15*01 F 1 8 7 8 8.7.8 [3.17.38.11] CARGWSPDYW in-frame + other possibilities: Homsap IGHJ3*01 and Homsap IGHJ3*02 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggtggtcccctgactactggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1879 1878 M02948:180:000000000-JFBGH:1:2106:24082:12954_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 983 94.09 207/220 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARGRGDYGDYYRFDYW in-frame + other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccgccagcccccagggagggggctggagtggattggggaaatcaatcatagtggagacaccaagtgcaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaacttgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgaggtgactacggtgactactatcgctttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1880 1879 M02948:180:000000000-JFBGH:1:2106:21580:14601_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKSEAGDPENFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatcagaggctggggatccggaaaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1881 1880 M02948:180:000000000-JFBGH:1:2106:11206:15469_1:N No rearrangement found Homsap IGHV5-51*05 F 984 95.77 204/213 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 302 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1882 1881 M02948:180:000000000-JFBGH:1:2106:12695:15572_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 3 8 7 24 8.7.24 [3.17.38.11] CARGVEDIVVVPAIRTDDYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacatggctgtgtattactgtgcgagaggcgtggaggatattgtagtagtaccagccatccggaccgacgactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1883 1882 M02948:180:000000000-JFBGH:1:2106:17379:15672_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-16*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARDGRGTGDQYAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagacggtcgtgggactggggatcagtacgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1884 1883 M02948:180:000000000-JFBGH:1:2106:12627:16737_1:N productive Homsap IGHV3-48*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAMDIAVAGTFFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggccccagggaaggggctggagtgggtttcatacattagtagtagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgatggatatagcagtggctggtacattctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1885 1884 M02948:180:000000000-JFBGH:1:2106:18025:17382_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD3-10*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARARYYYGSGLWFDPW in-frame + cactgtctctggtggctccatcagtagctactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagctcgatattactatggttcggggctctggttcgacccctggggccagggaaccctggtgaccgtctcctcagggagtgcatccgccccaacgcttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1886 1885 M02948:180:000000000-JFBGH:1:2106:16037:17546_1:N productive Homsap IGHV4-59*12 (F) 1028 96.36 212/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 7 24 8.7.24 [3.17.38.11] CARVGDSSGYIRSSKTSYYYYYMDVW in-frame + cgctgtcaatggtgggtccttcagtggttattactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagggtgggggatagtagtggttatatccgatcaagcaaaacatcttactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1887 1886 M02948:180:000000000-JFBGH:1:2106:12639:17638_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 3 8 8 14 8.8.14 [2.17.38.11] CATVSIFGVVIPFDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagtatcgatttttggagtggttattccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1888 1887 M02948:180:000000000-JFBGH:1:2106:13743:18049_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-1*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARQFNPTDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagttcaatccgactgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1889 1888 M02948:180:000000000-JFBGH:1:2106:18148:19951_1:N unproductive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-21*01 F 3 8 8 X 8.8.X [3.17.38.11] CARDLAPLWGGT#AFDIW out-of-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatctcgcccccctgtggggggggaccatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1890 1889 M02948:180:000000000-JFBGH:1:2106:14954:20006_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-21*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARGGGLCGGDCYMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggaacatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggcgggggtctttgtggtggtgattgttacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1891 1890 M02948:180:000000000-JFBGH:1:2106:15411:20521_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-21*02 F 3 8 7 9 8.7.9 [3.17.38.11] CARDTAEGPYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatactgccgaggggccatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1892 1891 M02948:180:000000000-JFBGH:1:2106:7569:21073_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 785 100.00 157/157 nt Homsap IGHJ4*03 F 159 81.25 39/48 nt Homsap IGHD2-15*01 F 2 X 8 15 X.8.15 [X.6.38.11] CAGGRGECSGGSCYPVW in-frame + gcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgggtgggcggggggaatgtagtggtggtagctgctaccccgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 266 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1893 1892 M02948:180:000000000-JFBGH:1:2106:12949:21086_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-2*01 F 1 8 8 14 8.8.14 [2.17.38.11] CSGYQLPPTHNWFDPW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgttctgggtaccagctgccccccacgcacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1894 1893 M02948:180:000000000-JFBGH:1:2106:17476:21138_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-18*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARGPYSYGSYYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggccatacagctatggctcctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1895 1894 M02948:180:000000000-JFBGH:1:2106:26409:21167_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*07 F 1010 89.88 222/247 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD1-26*01 F 1 8 8 27 8.8.27 [11.17.38.11] CARHAVGGIVGATTSTPLEVDYYYYMDVW in-frame + cggtgagtctcttaagatttctagtaagggttctggatacagctttacctgcttctgtatctgcttgtttctctatatgcctggcaaagtccttgagtggatggctatcttcttttctgttgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgcggttgggggtatagtgggagctactacttcaacacctcttgaagtagactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 392 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1896 1895 M02948:180:000000000-JFBGH:1:2106:26433:21299_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 1 8 8 18 8.8.18 [3.17.38.11] CARDGRVLRFLEWFEIFDYW in-frame + ttcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcgagagatgggcgggtattacgatttttggagtggtttgagatctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1897 1896 M02948:180:000000000-JFBGH:1:2106:6581:23291_1:N: productive Homsap IGHV4-61*01 F 1121 99.56 225/226 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-26*01 F 3 10 7 19 10.7.19 [3.17.38.11] CARDGNDSGSYLGSYYGMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccacatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcaagagatgggaatgatagtgggagctacctgggatcctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccttgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1898 1897 M02948:180:000000000-JFBGH:1:2106:12377:23807_1:N productive Homsap IGHV1-24*01 F 1146 99.57 230/231 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-8*01 F 1 8 8 14 8.8.14 [6.17.38.11] CARDRRPDYSGWFDPW in-frame + gtctcctgcaaggtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagagatcgaaggcccgactactcagggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 337 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1899 1898 M02948:180:000000000-JFBGH:1:2106:18982:24545_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [3.17.38.11] CAKDEGYCSSTSCYNWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatgagggttattgtagtagtaccagctgctataactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1900 1899 M02948:180:000000000-JFBGH:1:2105:20633:2334_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1055 97.73 215/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-24*01 ORF 2 8 7 13 8.7.13 [3.17.38.11] CVREDTEGWHYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattggatatatctattacactgggagtaccaactacaacccctccctcaagagtcgagtcaccatatcattagacacgtccaagaaccagttctccctgaagctgacctctgtgaccgctgcggacacggccgtgtattactgtgtgagagaggacaccgagggctggcactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1901 1900 M02948:180:000000000-JFBGH:1:2105:17223:3230_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARLKGAHLDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagactcaagggcgcacaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1902 1901 M02948:180:000000000-JFBGH:1:2105:12440:5023_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARGGSYSSSPVDDW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggcatgggtctcagctattagtagtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtatatcactgtgcaagagggggatcgtatagtagttcgccagttgacgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1903 1902 M02948:180:000000000-JFBGH:1:2105:10236:6142_1:N: productive Homsap IGHV3-7*01 F 1097 99.10 221/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD5-12*01 F 3 8 8 11 8.8.11 [3.17.38.11] CAKNIGYYRFDPW in-frame + tgcagcctctggattcacctttagtagctattggatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgttttactgtgcgaaaaatatcggctactacaggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1904 1903 M02948:180:000000000-JFBGH:1:2105:10892:6310_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD5-18*01 F 3 8 8 22 8.8.22 [3.17.38.11] CASLSSYSYGSSREYYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagcctatcttcatacagctatggttcctcccgagagtactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1905 1904 M02948:180:000000000-JFBGH:1:2105:13538:7065_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 1 8 8 15 8.8.15 [2.17.38.11] CAKLRFLGNYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtatattactgtgcgaaattacgatttttgggaaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1906 1905 M02948:180:000000000-JFBGH:1:2105:19038:7827_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*01 F, or Homsap IGHJ4*03 F (see comment) 213 93.75 45/48 nt Homsap IGHD3-16*02 F 3 8 8 17 8.8.17 [3.17.38.11] CARDLGGSGASGWYYFDYW in-frame + other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatctcggcggatcaggagctagcgggtggtactactttgactactggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1907 1906 M02948:180:000000000-JFBGH:1:2105:4229:7849_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [2.17.38.11] CATGVGLVGASGYYYVYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacaggggtggggctagtgggagctagtggttattactacgtttactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1908 1907 M02948:180:000000000-JFBGH:1:2105:7121:8320_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKAAAGRVLYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtaacacatactacgcagactccgtgaagggccggttcaccgtctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagcagcagctggtagggttttgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1909 1908 M02948:180:000000000-JFBGH:1:2105:26323:10099_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ2*01 F 175 81.13 43/53 nt Homsap IGHD6-19*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARHEQWLDPFDLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgagcagtggctggaccctttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1910 1909 M02948:180:000000000-JFBGH:1:2105:7621:10450_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*02 F or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 635 100.00 127/127 nt Homsap IGHJ6*04 F 315 100.00 63/63 nt Homsap IGHD2-2*01 F 3 X 4 22 X.4.22 [X.X.38.11] CARHGGEGIVVPGDYYYYYGMDVW in-frame + tgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatggcggcgagggtattgtagtacccggcgattactactactactacggtatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 257 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1911 1910 M02948:180:000000000-JFBGH:1:2105:8341:10544_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARVASSGWESDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtcgcttccagtggctgggagtctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1912 1911 M02948:180:000000000-JFBGH:1:2105:14351:11139_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F (see comment) 256 90.32 56/62 nt Homsap IGHD3-10*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARDLNLGSGSYYNIYYYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (highest number of consecutive identical nucleotides) tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccatcagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatttaaatttgggttcggggagttattataacatctactactacggtatggacgtctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttctccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1913 1912 M02948:180:000000000-JFBGH:1:2105:16805:11795_1:N productive Homsap IGHV1-8*02 F 1050 97.72 214/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD4-17*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARLSPVPTYYYYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacgggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagactatctccggtgccgacctattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1914 1913 M02948:180:000000000-JFBGH:1:2105:11119:12846_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD3-16*02 F 2 8 8 10 8.8.10 [2.17.38.11] CARDRDRYFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacatggccgtgtattactgtgcgagagatcgtgaccggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1915 1914 M02948:180:000000000-JFBGH:1:2105:21486:15768_1:N productive Homsap IGHV1-18*01 F 978 94.06 206/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-13*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARGGNSWPNINWFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggccgggtcaccatgaccacggacatgtccatcaccacagcctacctggaactgagtagactgggatctgacgacacggccgtgtattactgtgcgaggggcggcaacagctggccaaatattaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1916 1915 M02948:180:000000000-JFBGH:1:2105:6403:16536_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD4-17*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARGLGYGDANYWYFDLW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcctcggctacggtgacgccaactactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1917 1916 M02948:180:000000000-JFBGH:1:2105:14546:16763_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-10*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKDRSNYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcggagtaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1918 1917 M02948:180:000000000-JFBGH:1:2105:6846:18110_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CAKDRYSGSYSADYFDYW in-frame + tgcagcctctggattcaccttcagtgcctataccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcgttatagtgggagctactccgccgactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1919 1918 M02948:180:000000000-JFBGH:1:2105:18889:18786_1:N productive Homsap IGHV1-18*01 F 1023 96.35 211/219 nt Homsap IGHJ1*01 F 224 92.31 48/52 nt Homsap IGHD1-26*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDSSEERELGYFQHW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattcctcggaggagagggagctaggatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1920 1919 M02948:180:000000000-JFBGH:1:2105:5334:19286_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD1-26*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARQGAATKRNYYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcccgtcagggggcagctacgaagcgtaattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1921 1920 M02948:180:000000000-JFBGH:1:2105:18384:19676_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*01 F 2 8 8 10 8.8.10 [2.17.38.11] CARGSSTSANYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctcagatctgaggacacggccgtgtattactgtgcgagaggtagtagtaccagcgctaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1922 1921 M02948:180:000000000-JFBGH:1:2105:22144:20504_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 3 8 7 22 8.7.22 [3.17.38.11] CARGPRGVVPAAIGYYYYYCMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcccaaggggggtagtaccagctgctattggctactactactactactgcatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1923 1922 M02948:180:000000000-JFBGH:1:2105:18584:20805_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD3-10*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARHVHRAGSGSGSNYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtacatcgtgcgggatctggttcggggagcaactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1924 1923 M02948:180:000000000-JFBGH:1:2105:26807:21045_1:N productive Homsap IGHV1-8*02 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 3 8 8 9 8.8.9 [2.17.38.11] CARGRGRDDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccgaggaagggatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1925 1924 M02948:180:000000000-JFBGH:1:2105:18058:21790_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARDIMVRGVMDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatattatggttcggggagttatggactactggggccagggaaccccggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1926 1925 M02948:180:000000000-JFBGH:1:2105:11124:22269_1:N unproductive (see comment) Homsap IGHV3-33*03 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [3.17.38.11] CTRATRIVYLLYDYW in-frame + rearranged sequence, stop codons tgcagcgtctggattcaccttcagtagctatggcatacactgggtccgccaggcaccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactaagcagactccgtgaaggcccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgagcagcctgctagacgaggacacggctgtttattactgtacgagggcaacgagaattgtttaccttctctatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1927 1926 M02948:180:000000000-JFBGH:1:2105:18079:25160_1:N productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 1016 95.07 212/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-2*01 F 2 8 8 22 8.8.22 [3.17.38.11] CSRAYCSSPVCSQRGFYYYGIDVW in-frame + tgcagcctctggattcaccttcggtagctactggatgcactgggtccgccaagctccagggaaagggctggtgtgggtcgctcgtatgaatggtgatgggagtgacacaacctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctggatctgcagatgaacagtctgagagccgaggacacggctgtgtattactgttcaagagcatattgtagtagtcccgtctgctcccaaaggggtttctactactacggtatcgacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1928 1927 M02948:180:000000000-JFBGH:1:2104:23826:2298_1:N: unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-10*01 F 2 8 8 X 8.8.X [2.17.38.11] CARDRAPAVLLWFGELG##W out-of-frame + rearranged sequence, stop codons gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgggcgcctgccgtattactatggttcggggagttggggtgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1929 1928 M02948:180:000000000-JFBGH:1:2104:16889:2587_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-16*02 F 1 8 8 20 8.8.20 [2.17.38.11] CARGEFSAGSAHRYYYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggggagttctcggcagggagcgcccaccgctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1930 1929 M02948:180:000000000-JFBGH:1:2104:15012:3861_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69D*01 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD3-16*02 F 1 8 8 15 8.8.15 [2.17.38.11] CARGRGELSLGDWFDPW in-frame + gcttctggatacaccttcactagctatgctatgaattgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcaggggggagttatcgttaggggactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1931 1930 M02948:180:000000000-JFBGH:1:2104:8522:9910_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-21*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARRSWDWIPRYAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacggagttgggattggattcctagatatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1932 1931 M02948:180:000000000-JFBGH:1:2104:23561:10530_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARRPKRSSRTTLNEGFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctcgtgactctgataccagatacagtctgtccttccaaggccaggtcaccatctcagccgacaagtccatcaacaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatatattactgtgcgagacgccctaagaggtctagtaggaccactctgaatgagggttttgatatctggggcgaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1933 1932 M02948:180:000000000-JFBGH:1:2104:10178:12200_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARIEWEQPFDYW in-frame + ttcagcctctggcttcaccttcagtacttataccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtggttatatatattacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgacgacacggctgtgtattactgtgcgagaatcgagtgggagcaaccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1934 1933 M02948:180:000000000-JFBGH:1:2104:22798:13831_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-21*02 F 2 8 8 20 8.8.20 [2.17.38.11] CARERGGGDCYSGGTSCYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctagacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagaggggtggtggtgactgctattcgggcgggacctcgtgctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1935 1934 M02948:180:000000000-JFBGH:1:2104:20186:14075_1:N productive Homsap IGHV3-48*03 F 1176 99.58 236/237 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 1 8 8 11 8.8.11 [8.17.38.11] CASEWFGELLDYW in-frame + ctgagactctcctgtgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtaatagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagtgaatggttcggggagttattggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 334 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1936 1935 M02948:180:000000000-JFBGH:1:2104:15888:14252_1:N productive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23*05 F or Homsap IGHV3-23D*01 F 615 100.00 123/123 nt 99.19 122/123 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD2-2*02 F 2 7 X 17 7.X.17 [3.X.30.11] CAKGPYCSSTSCYTYMDVW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 38 of V-REGION: 100 nucleotides (from position 34 in the user submitted sequence), (cause frameshift) tgcagcctctggattcacctttagcagctatgccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggcccttattgtagtagtaccagctgctatacctacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 269 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1937 1936 M02948:180:000000000-JFBGH:1:2104:24217:14267_1:N productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 908 89.69 200/223 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD5-12*01 F 3 8 8 19 8.8.19 [3.17.38.11] CARDGAYSGYDFPPTYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcacgtattaacactgatgggagtggcgcaaattacgcggacgccgtgaggggccgattcaccatctccagggacagcgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggggcctatagtggctacgatttcccaccgacctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1938 1937 M02948:180:000000000-JFBGH:1:2104:16965:14286_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 7 9 8.7.9 [3.17.38.11] CARGESWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcgaatcctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1939 1938 M02948:180:000000000-JFBGH:1:2104:14249:14835_1:N unproductive (see comment) Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD1-26*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARGRIVGAND* in-frame + rearranged sequence, stop codons; TRP 118 not identified tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcaagaggccgtatagtgggagccaatgactagggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1940 1939 M02948:180:000000000-JFBGH:1:2104:9232:16291_1:N: unproductive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 X 8.8.X [3.17.38.11] CARDRNTVVVV#FDYW out-of-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccaccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatcgtaatacagtggtggtagttgctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1941 1940 M02948:180:000000000-JFBGH:1:2104:13387:16407_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD1-26*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARGQGGSYLRAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccagggtgggagctacttgcgcgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1942 1941 M02948:180:000000000-JFBGH:1:2104:27408:18733_1:N productive Homsap IGHV1-8*01 F 1014 95.89 210/219 nt Homsap IGHJ6*02 F 193 79.03 49/62 nt Homsap IGHD6-19*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARDSGGGDWGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcttacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagactcagggggcggtgactggggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1943 1942 M02948:180:000000000-JFBGH:1:2104:21175:19274_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARGQTYYYGSGSYWVIDYW in-frame + cactgtctctggtggccccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggacaaacctattactatggttcggggagttattgggtaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1944 1943 M02948:180:000000000-JFBGH:1:2104:11824:19560_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 3 8 8 18 8.8.18 [3.17.38.11] CAKVLRTHQRGYSYGPNDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaactattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtcctgaggacccaccaacgtggatacagctatggtcccaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1945 1944 M02948:180:000000000-JFBGH:1:2104:22632:21497_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*02 F or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 655 100.00 131/131 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-22*01 F 2 X 5 22 X.5.22 [X.X.38.11] CARLSVLWYYYDSSGYHPGAFDIW in-frame + ctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactaagtgtcttgtggtattactatgatagtagtggttatcacccaggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 261 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1946 1945 M02948:180:000000000-JFBGH:1:2104:17318:21728_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ1*01 F (see comment) 197 86.54 45/52 nt Homsap IGHD3-22*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARGYYDSSGYYYEQW in-frame + other possibilities: Homsap IGHJ2*01 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggctactatgatagtagtggttattactacgagcagtggggccagggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1947 1946 M02948:180:000000000-JFBGH:1:2104:12834:21888_1:N productive Homsap IGHV3-7*03 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*02 F 2 8 8 10 8.8.10 [3.17.38.11] CARSPSSDKDYW in-frame + tgcagcctctggattcacctttaggagtcattggatgaagtgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaagaatatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagatccccgagctccgataaggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1948 1947 M02948:180:000000000-JFBGH:1:2104:18647:21907_1:N No rearrangement found Homsap IGHV5-51*05 F 804 86.38 184/213 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggctcaagacccgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 312 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1949 1948 M02948:180:000000000-JFBGH:1:2104:13843:23164_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 191 81.03 47/58 nt Homsap IGHD3-3*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARHSSRHYMDVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattcgagtcgtcactacatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1950 1949 M02948:180:000000000-JFBGH:1:2104:19987:23166_1:N productive Homsap IGHV3-48*03 F 1025 95.52 213/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 2 8 8 26 8.8.26 [3.17.38.11] CAREKTVNYDFWSGIAGSPNYYYGMDVW in-frame + tggagcctctggattcaccttcagtagctactcgatgcactgggtccgccaagctccagggaaggggctggaatgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcatcatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaaaagacggtaaattacgatttttggagtggtatcgccggctcccctaactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 396 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1951 1950 M02948:180:000000000-JFBGH:1:2104:17316:24302_1:N No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagatagcggtgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 295 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1952 1951 M02948:180:000000000-JFBGH:1:2104:15308:24694_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-10*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARAHYGSGSDNW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgcactatggttcggggagtgataactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1953 1952 M02948:180:000000000-JFBGH:1:2104:21477:25059_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-1*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAKGEFGTTGGPFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggagagtttgggacgacgggcggaccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1954 1953 M02948:180:000000000-JFBGH:1:2103:8373:3038_1:N:0 productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-2*01 F 2 8 8 12 8.8.12 [3.17.38.11] CASCSRRAYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagttgtagtaggagggcctactacatggacgtctggggcgaagggaccacggtcaccgtctcctcaaggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1955 1954 M02948:180:000000000-JFBGH:1:2103:19418:3517_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD5-18*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARGDTAMVTNYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggggatacagctatggttacgaattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccctttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1956 1955 M02948:180:000000000-JFBGH:1:2103:10746:4589_1:N: productive Homsap IGHV4-59*12 (F) 1091 99.55 219/220 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 3 8 7 19 8.7.19 [3.17.38.11] CARGNQQLASGSYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcaaccagcagctggcgtcaggaagctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1957 1956 M02948:180:000000000-JFBGH:1:2103:14872:4600_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARDPGIAAAGRFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcccggtatagcagcagcgggaaggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1958 1957 M02948:180:000000000-JFBGH:1:2103:10312:6841_1:N: No rearrangement found Homsap IGHV3-23*04 F (see comment) 304 64.67 108/167 nt 8 5 X 8.5.X [25.17.X.X] - no rearrangement found low V-REGION identity (64.67%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gggggaaaagggttggggcggatgcactccctgaggagacggtgaccagggttccctggccccagtagtcaccccagtcccctttcacacagtaatatacggccgtgtcctcgactctcaggctgttcatttgcagatacagtgtgttcttggagctgtctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggcaggggctggagtgggtctcacttattagtgacaatggtgg 0 0 255 4 (complrev_indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1959 1958 M02948:180:000000000-JFBGH:1:2103:12533:8450_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKVAGSTSELDWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggccgggagtaccagcgaattggactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1960 1959 M02948:180:000000000-JFBGH:1:2103:17578:11497_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-14*01 ORF 2 8 8 13 8.8.13 [3.17.38.11] CAKDRADPLYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatagggccgatccactgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1961 1960 M02948:180:000000000-JFBGH:1:2103:3458:12619_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARRYSGSYFDYW in-frame + gcttctggaggcaccttcagcagctatgatatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagttgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaggtatagtgggagctacttcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1962 1961 M02948:180:000000000-JFBGH:1:2103:5104:13247_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARVDCSSTSCYFGGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtagattgtagtagtaccagctgctatttcggcggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1963 1962 M02948:180:000000000-JFBGH:1:2103:5089:13394_1:N: productive Homsap IGHV3-7*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARGPDAGYYYYFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggggccccgacgcgggctactactactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1964 1963 M02948:180:000000000-JFBGH:1:2103:20499:13512_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD2-15*01 F 3 8 7 14 8.7.14 [3.17.38.11] CAKPSPQGSNYWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtatattactgtgcgaaaccttcccctcaaggcagtaactactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcacctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1965 1964 M02948:180:000000000-JFBGH:1:2103:20776:13640_1:N productive Homsap IGHV4-38-2*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD5-18*01 F 1 9 7 11 9.7.11 [3.17.38.11] CAREGAMVYFDYW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaggggctatggtctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1966 1965 M02948:180:000000000-JFBGH:1:2103:25924:13713_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD6-19*01 F 1 8 7 24 8.7.24 [3.17.38.11] CASNVMGLYDSGRRGWSGYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagtaacgtgatggggttatacgattcgggccgcagggggtggtctggctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1967 1966 M02948:180:000000000-JFBGH:1:2103:1850:13870_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CASLYDSSGYYVSDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtctgtatgatagtagtggttattacgtttccgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1968 1967 M02948:180:000000000-JFBGH:1:2103:2681:13960_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD6-13*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARNEGQQPINNWFDPW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaacgaggggcagcagccaattaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttaccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1969 1968 M02948:180:000000000-JFBGH:1:2103:20010:14321_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 184 77.42 48/62 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARHDYYDSSGYMDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgattactatgatagtagtggttatatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1970 1969 M02948:180:000000000-JFBGH:1:2103:10542:14590_1:N productive Homsap IGHV1-18*01 F 933 91.78 201/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARDPSNTSGRYPNFDFW in-frame + gcttctggttacatatttaacagacatggtatcgcctgggtgcgacaggcccctggacagggacttgagtggatgggatggatcagcgcttacaatggtgacacaatctatgcacagaagttccagggcagagtcaccatgaccactgacacacccacgagcacagcctacatggagctgcggagcctgagatctgacgacacggccctctatcactgtgcgagagatcccagcaataccagtggcaggtaccccaactttgacttctggggccagggaaccctggtgaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1971 1970 M02948:180:000000000-JFBGH:1:2103:27623:14783_1:N productive Homsap IGHV3-11*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-14*01 ORF 3 8 8 9 8.8.9 [3.17.38.11] CARGTRANDYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagggacccgggcaaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1972 1971 M02948:180:000000000-JFBGH:1:2103:6330:16051_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-25*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARIAAATPGVFWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgcgaatagcagcagccacccccggggttttctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1973 1972 M02948:180:000000000-JFBGH:1:2103:22425:16227_1:N productive Homsap IGHV4-61*01 F 1058 96.46 218/226 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-18*01 F 3 10 7 14 10.7.14 [3.17.38.11] CARDGYSYGYYYFDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattggggaaatcaatcatagtggagacaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatggatacagctatggttattactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1974 1973 M02948:180:000000000-JFBGH:1:2103:23368:16793_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-2*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARVSVGGPGDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgatcagcctgagatctgaggacacggccgtgtattactgtgcgagagtcagtgtcgggggaccaggtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1975 1974 M02948:180:000000000-JFBGH:1:2103:16967:17939_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 238 87.10 54/62 nt Homsap IGHD2-15*01 F 2 8 8 26 8.8.26 [3.17.38.11] CARQATGYCSGGSCYFPQAYYYYYMDVW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaggctacaggatattgtagtggtggtagctgctacttcccccaagcctactactactactacatggacgtctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 395 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1976 1975 M02948:180:000000000-JFBGH:1:2103:7078:18455_1:N: productive Homsap IGHV3-64D*06 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 233 86.89 53/61 nt Homsap IGHD5-24*01 ORF 3 8 8 11 8.8.11 [3.17.38.11] CVNRQGFYGMDVW in-frame + ttcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaagggactggaatatgtttcagctattagtagtaatgggggtagcacatactacgcagactccgtgaagggcagattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgagcagtctgagagctgaggacacggctgtgtattactgtgtgaatcgacaaggcttctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1977 1976 M02948:180:000000000-JFBGH:1:2103:23689:19669_1:N productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1106 99.55 222/223 nt Homsap IGHJ5*02 F 169 90.24 37/41 nt 9 7 5 9.7.5 [3.17.38.11] CAREKAW in-frame + cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagagaaggcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1978 1977 M02948:180:000000000-JFBGH:1:2103:6521:20206_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 712 95.48 148/155 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD3-10*01 F 2 X 8 13 X.8.13 [X.5.38.11] CARSGGYLYYYMDVW in-frame + atatcgcgaggggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatccggcggatatttgtactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 258 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1979 1978 M02948:180:000000000-JFBGH:1:2103:17153:22070_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 2 8 8 10 8.8.10 [3.17.38.11] CATTYGDVFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcaactacctacggtgacgtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1980 1979 M02948:180:000000000-JFBGH:1:2103:7273:23464_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARASVRDCSSTSCWYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgagtgttcgtgattgtagtagtaccagctgctggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1981 1980 M02948:180:000000000-JFBGH:1:2102:6343:4078_1:N:0 productive Homsap IGHV3-7*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARDGYSYGFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagacggatacagctatggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1982 1981 M02948:180:000000000-JFBGH:1:2102:13434:5717_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD5-18*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARHPGRGDYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaataacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacatccgggtaggggcgactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1983 1982 M02948:180:000000000-JFBGH:1:2102:13528:6319_1:N: productive Homsap IGHV3-48*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD4-17*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARDPGYGDYIGGKDYW in-frame + tgcagcctctggatttaccttcagtagttttgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtggcggtagtaccatatactacgcagactctgtgaagggccgattcaccatttccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatccgggctacggtgactacatcggtggtaaggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1984 1983 M02948:180:000000000-JFBGH:1:2102:18653:7178_1:N: productive Homsap IGHV3-48*03 F 1202 99.18 242/244 nt Homsap IGHJ4*03 F (see comment) 177 85.42 41/48 nt Homsap IGHD2-8*01 F 2 8 8 17 8.8.17 [10.17.38.11] CARDRPPYCTNGVCYWDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) ggggtccctgagactctcctgtgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaccgtcccccatattgtactaatggtgtatgctactgggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1985 1984 M02948:180:000000000-JFBGH:1:2102:11900:7553_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-6*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARRGELGDFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggcgaggcgagctcggtgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1986 1985 M02948:180:000000000-JFBGH:1:2102:18891:7554_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARHAGYCSSTSCSDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacgcaggatattgtagtagtaccagctgctcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1987 1986 M02948:180:000000000-JFBGH:1:2102:28655:8822_1:N: unproductive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ1*01 F 197 86.54 45/52 nt Homsap IGHD4-11*01 ORF 2 8 7 X 8.7.X [3.17.38.11] CARTRATVAVPKNTSS#W out-of-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaggaccagggctacagtagccgtccccaaaaatacttccagtactggagccagggcaccctggtcaccgtctccgcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1988 1987 M02948:180:000000000-JFBGH:1:2102:25128:9424_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ1*01 F 224 92.31 48/52 nt Homsap IGHD1-14*01 ORF 3 8 8 11 8.8.11 [3.17.38.11] CASNFPYQYFQHW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagtaatttcccgtaccaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1989 1988 M02948:180:000000000-JFBGH:1:2102:11371:11104_1:N productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-12*01 F 3 8 8 21 8.8.21 [2.17.38.11] CAKDSLPSWGGYSGYDDPQSYYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtatattactgtgcgaaagattcgctcccgtcgtggggtggatatagtggctacgacgatccccaaagctactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1990 1989 M02948:180:000000000-JFBGH:1:2102:11902:12796_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1043 96.41 215/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARDPLPYCSSTSCYDWFDPW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatccgcttccttattgtagtagtaccagctgctatgattggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1991 1990 M02948:180:000000000-JFBGH:1:2102:23389:13144_1:N productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt 8 8 11 8.8.11 [3.17.38.11] CARRGSPGAFDIN (see V-DOMAIN Functionality comment) in-frame + IMGT/JunctionAnalysis gives no results for this JUNCTION; TRP 118 not identified aagggttctggatacagctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatgggaatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggggcagtccgggtgcttttgatatcaacggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1992 1991 M02948:180:000000000-JFBGH:1:2102:26183:13195_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69D*01 F 640 100.00 128/128 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD5-18*01 F 1 X 4 20 X.4.20 [X.X.38.11] CARAGPLDTAMVTSYYYYMDVW in-frame + tctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcaggccccttggatacagctatggttacttcctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 252 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1993 1992 M02948:180:000000000-JFBGH:1:2102:8620:13314_1:N: productive Homsap IGHV4-34*03 F 1068 98.63 216/219 nt Homsap IGHJ1*01 F (see comment) 161 78.85 41/52 nt Homsap IGHD4-11*01 ORF 1 8 7 19 8.7.19 [3.17.38.11] CASSIPISRRLQHLVGFWVNW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtatttgtgtgcgagttcaatcccaatttcaagacgcctacagcacctagttggattttgggttaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1994 1993 M02948:180:000000000-JFBGH:1:2102:8548:13698_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-15*01 F 3 8 7 19 8.7.19 [3.17.38.11] CATAGGSVVVAATRDNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaccgccgggggatccgtggtggtagctgctactagggacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1995 1994 M02948:180:000000000-JFBGH:1:2102:29315:14082_1:N productive Homsap IGHV4-61*01 F 1121 99.56 225/226 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD1-26*01 F 1 10 7 18 10.7.18 [3.17.38.11] CARAEVGAKVGYFYYYMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactattggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcagaagtgggagctaaagtgggctacttctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1996 1995 M02948:180:000000000-JFBGH:1:2102:23212:14593_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-7*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARVWDYASPDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtctgggactacgcctctcctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1997 1996 M02948:180:000000000-JFBGH:1:2102:15592:14599_1:N productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARDLIAVAGTPFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatctgatagcagtggctggtaccccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1998 1997 M02948:180:000000000-JFBGH:1:2102:6768:15111_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1064 98.18 216/220 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD3-9*01 F 2 8 7 19 8.7.19 [3.17.38.11] CARGVDRLTTRLYYYYGMDVW in-frame + cgctgtctctggtgggtccttcagtggttactactggacttggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcacagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgtagatcggttgactacgcgactttactactattacggtatggacgtctggggccaagggaccacggtcagcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
1999 1998 M02948:180:000000000-JFBGH:1:2102:5426:15783_1:N: productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-16*02 F 3 8 8 23 8.8.23 [2.17.38.11] CARVESLMITFGGVIVNNNDAFDIW in-frame + gcatctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtagagtcccttatgattacgtttgggggagttatcgtgaacaacaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2000 1999 M02948:180:000000000-JFBGH:1:2102:6420:18621_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 980 93.27 208/223 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKGQIGTYVVFDIW in-frame + tgcagcctctggattcacctttagaagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtgataccacctactacgcagactccgtgaggggccggttcagcatctccagagacaattccaggaacacagtgtttttgcaaatgaatagcctgagagccgaggacacggccatttatcactgtgcgaaaggccagattgggacctacgtcgtgtttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2001 2000 M02948:180:000000000-JFBGH:1:2102:14741:18946_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 962 92.38 206/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-23*01 ORF 2 8 8 15 8.8.15 [3.17.38.11] CARDPLYDYGGNSASHW in-frame + tgtagcctctggattcaccctcagtagttgctggatggactgggtccgccaagctccagggaaggggctggtgtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatccactgtatgactacggtggtaactccgcttcgcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2002 2001 M02948:180:000000000-JFBGH:1:2102:15630:19921_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-9*01 F 2 8 8 15 8.8.15 [3.17.38.11] CASGGGDILTGYHIDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagtggcggaggggatattttgactggttatcacattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2003 2002 M02948:180:000000000-JFBGH:1:2102:21303:21985_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARDDSGSWGYYNGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgatagtgggagctggggttactacaacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2004 2003 M02948:180:000000000-JFBGH:1:2102:14384:22157_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 942 92.24 202/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CAREGGAVNFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggggggagcggtaaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2005 2004 M02948:180:000000000-JFBGH:1:2102:21377:23460_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARAVAGNSVDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcagtggctggtaattcggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2006 2005 M02948:180:000000000-JFBGH:1:2102:7240:23619_1:N: productive Homsap IGHV4-31*09 F 1089 98.22 221/225 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-13*01 F 1 10 7 12 10.7.12 [3.17.38.11] CARGYSSSWYYDYW in-frame + cactgtctctggtggctccatcagcagtggtggttactactggagctggatccgccagcacccagggaagggcctggagtggattgggtacatctattacagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctccgtgaccgctgcggacacggccgtgtattactgtgcgagggggtatagcagcagctggtactatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2007 2006 M02948:180:000000000-JFBGH:1:2117:14808:2162_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F (see comment) 161 78.85 41/52 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARTRDYDSSGYYYRW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaacaagagactatgatagtagtggttattactatcgttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2008 2007 M02948:180:000000000-JFBGH:1:2117:19205:2642_1:N: productive Homsap IGHV4-34*11 F 956 92.73 204/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-19*01 F 3 8 7 18 8.7.18 [3.17.38.11] CARTVRGWQWLGANDAFDIW in-frame + cgctgtctatggagggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattgcatttatctattatactgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcaatggacacgtccaagaaccagttctccctgaagatgagctctgtgaccgctgcggacacggccatgtattactgtgcgagaaccgtgagaggctggcagtggctgggggcgaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2009 2008 M02948:180:000000000-JFBGH:1:2117:24559:2944_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1068 98.63 216/219 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARVGIAVAGNYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatctctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgggcagcctgagatctgacgacacggccgtgtattactgtgcgagagtcggtatagcagtggctggaaactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2010 2009 M02948:180:000000000-JFBGH:1:2117:14562:3382_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 3 8 8 23 8.8.23 [2.17.38.11] CASPPNEGDIVVVPAAIDYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcccaccgaacgagggtgatattgtagtagtaccagctgctattgactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2011 2010 M02948:180:000000000-JFBGH:1:2117:23715:3862_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD4-11*01 ORF 3 8 8 18 8.8.18 [3.17.38.11] CAKVGTTITTYYSTYGMDVW in-frame + tgcagcctctggattcacctttaacagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccgcttaaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggggactacaataactacgtactacagtacttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2012 2011 M02948:180:000000000-JFBGH:1:2117:5846:5931_1:N:0 productive Homsap IGHV4-59*01 F 1186 99.58 238/239 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD4-17*01 F 2 8 7 18 8.7.18 [9.17.38.11] CARGSDYGDYGGSMNAFDIW in-frame + agaccctgtccctcacctgcactgtctctggtggctccattagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggttccgactacggtgactacggcgggtcgatgaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2013 2012 M02948:180:000000000-JFBGH:1:2117:22270:6520_1:N: unproductive (see comment) Homsap IGHV1-69*06 F, or Homsap IGHV1-69*13 F or Homsap IGHV1-69*14 F (see comment) 1136 95.55 236/247 nt Homsap IGHJ6*02 F 184 77.42 48/62 nt Homsap IGHD2-15*01 F 2 8 8 13 8.8.13 [11.17.38.11] *ARRGGRYYYGMDGW in-frame + rearranged sequence, stop codons 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctcagtgaaggtctcctgcaaggcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatgaagctgagaagcatgagaactgaggacacggcagtgtattagtgagcgagaaggggtgggagatactactacggtatggacggctgggaccaagggacgaaggtaaccgtcgcatcagggagtgcatgcaccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2014 2013 M02948:180:000000000-JFBGH:1:2117:19779:6965_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARQGYYYGSGSYDDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaagggtattactatggttcggggagttatgacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2015 2014 M02948:180:000000000-JFBGH:1:2117:16112:7867_1:N: No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagattttccggtgaatttccctcgcgatat 0 0 256 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2016 2015 M02948:180:000000000-JFBGH:1:2117:28484:8194_1:N: productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) or Homsap IGHV4-4*10 (F) 1016 95.07 212/223 nt Homsap IGHJ3*01 F 196 88.00 44/50 nt Homsap IGHD3-16*02 F 1 9 7 14 9.7.14 [3.17.38.11] CAGEAGGADSHEFDVW in-frame + cgatgtctctggtggctccatcagcagtcgtaactggtggagttgggtccgccagtccccagggaaggggctggagtggattggggaaatctctcatagtgggagcaccagctccaacccgtccctcaagagtcgagtcaccatatcactagacaagtccacgaaccaattctccctgaagctgagttctgtgaccgccgcggacacggccatgtattactgtgcgggggaggcggggggggcggactcgcatgaatttgatgtctggggccagggaacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2017 2016 M02948:180:000000000-JFBGH:1:2117:19995:8677_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD5-18*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARGGLIQPYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaggcctaatacagccctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2018 2017 M02948:180:000000000-JFBGH:1:2117:20660:9030_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-6*01 F 1 8 7 14 8.7.14 [3.17.38.11] CARDRSSSSRGYFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatcggtctagcagctcccgaggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2019 2018 M02948:180:000000000-JFBGH:1:2117:3664:9148_1:N:0 unproductive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-13*01 F 1 8 8 X 8.8.X [2.17.38.11] CARKIGWGIAAAG#YYYGMDVW out-of-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaaaaattgggtggggtatagcagcagctggtcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 373 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2020 2019 M02948:180:000000000-JFBGH:1:2117:28811:10254_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-19*01 F 1 8 7 10 8.7.10 [3.17.38.11] CAISGGGAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtcaaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgatcagtggcgggggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctccgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2021 2020 M02948:180:000000000-JFBGH:1:2117:27180:10299_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [3.17.38.11] CASNPDYYGSGSYQNYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtaccacacactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagtaaccccgattactatggttcggggagttaccagaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2022 2021 M02948:180:000000000-JFBGH:1:2117:16691:10373_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 190 89.36 42/47 nt 8 8 7 8.8.7 [3.17.38.11] CARDHPDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcacccagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2023 2022 M02948:180:000000000-JFBGH:1:2117:13417:11265_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKWAGRQLWSYYLDSW in-frame + tgcagcctctggattcaccttcagtgactactacatgacctggatccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctacatctgcaaatgaacagcctgagagccgaggacacggccgtatactactgtgcgaagtgggccggaagacagctgtggtcgtactaccttgactcttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2024 2023 M02948:180:000000000-JFBGH:1:2117:15820:11438_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARTDSSGYPFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggacggatagtagtggttatccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2025 2024 M02948:180:000000000-JFBGH:1:2117:18947:11634_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*02 F 1 8 8 13 8.8.13 [2.17.38.11] CATDAPFLGSQGNYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagatgctccattccttggctcccagggaaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2026 2025 M02948:180:000000000-JFBGH:1:2117:7024:11795_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD4-17*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARGGDYGPYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggggtgactacggcccttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2027 2026 M02948:180:000000000-JFBGH:1:2117:11877:12058_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-8*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARADYCTNGVCFYWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcggactattgtactaatggtgtatgcttttactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2028 2027 M02948:180:000000000-JFBGH:1:2117:4545:12284_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F (see comment) 166 74.19 46/62 nt Homsap IGHD5-12*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARGIVATIGNHMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggatagtggctacgataggaaaccacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2029 2028 M02948:180:000000000-JFBGH:1:2117:9829:12289_1:N: productive Homsap IGHV4-61*01 F 1076 97.35 220/226 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-12*01 F 1 10 7 14 10.7.14 [3.17.38.11] CARGHSIVGSVPFDYW in-frame + cactgtctctggtggctccgtcagcagtggtacttactactggaattggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggaccaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaaactgaactctgtgaccgctgcggacacggccgtgtattactgtgcgagaggccactcgatcgtcggttcggtcccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2030 2029 M02948:180:000000000-JFBGH:1:2117:6082:12471_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-17*01 F 2 8 8 11 8.8.11 [2.17.38.11] CASHYGDYRLDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagccactacggtgactatcgacttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2031 2030 M02948:180:000000000-JFBGH:1:2117:16309:13079_1:N productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 2 8 8 9 8.8.9 [3.17.38.11] CAIGQLPFDFG in-frame + TRP 118 not identified tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcgattgggcaactaccctttgacttcgggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2032 2031 M02948:180:000000000-JFBGH:1:2117:13921:13113_1:N productive Homsap IGHV3-9*01 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 2 8 8 28 8.8.28 [3.17.38.11] CARAWAIWDPREGGSGSYTVLGYYYYMDVW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagcatgggccatatgggaccctcgggagggtggttcggggagttatacagtattgggctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 402 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2033 2032 M02948:180:000000000-JFBGH:1:2117:29489:13124_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARRGDSGEWFGPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgaggggatagtggcgagtggttcggcccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2034 2033 M02948:180:000000000-JFBGH:1:2117:6923:13261_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*02 F 3 8 8 23 8.8.23 [2.17.38.11] CASGGPDIVVVPAAQPDYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcggggggcctgatattgtagtagtaccagctgcgcagccagactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2035 2034 M02948:180:000000000-JFBGH:1:2117:10003:13951_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARGDDSSGPAQYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgatgatagtagtgggcccgctcagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2036 2035 M02948:180:000000000-JFBGH:1:2117:9937:14140_1:N: productive Homsap IGHV3-30*07 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [3.17.38.11] CASLYSSGWYISPLDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagtctgtatagcagtggctggtacatctctcccttggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2037 2036 M02948:180:000000000-JFBGH:1:2117:28292:14728_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ4*02 F 207 95.56 43/45 nt 8 8 6 8.8.6 [3.17.38.11] CARPFDYW in-frame + gagggttctggatacagctttagcagctactggatcggctgggtgcgccagttgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2038 2037 M02948:180:000000000-JFBGH:1:2117:3785:15572_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 3 8 8 24 8.8.24 [2.17.38.11] CASTLGPIVVVPAHRLGDYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtaccttggggcctattgtagtagtaccagctcaccgcctgggggactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2039 2038 M02948:180:000000000-JFBGH:1:2117:28807:15999_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 2 8 8 23 8.8.23 [2.17.38.11] CARGYLGYCSSTSCPDYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggatacctaggatattgtagtagtaccagctgccccgactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2040 2039 M02948:180:000000000-JFBGH:1:2117:8099:16398_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-22*01 F 2 10 7 12 10.7.12 [3.17.38.11] CARAYYDSSGYSNW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagggcttactatgatagtagtggttattctaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2041 2040 M02948:180:000000000-JFBGH:1:2117:25350:16408_1:N No rearrangement found Homsap IGHV4-34*12 F 983 94.09 207/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cgttgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggaggggactggggaaatcattcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctcaagttgagctctgtgaccgccgcggacgcggctgtgtaccctccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 307 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2042 2041 M02948:180:000000000-JFBGH:1:2117:23970:16693_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKHDSSGYYPAYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaacatgatagtagtggttattacccggcctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2043 2042 M02948:180:000000000-JFBGH:1:2117:12302:16903_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARLGDGYYDSSGYLYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagccccaagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacttggggacggttactatgatagtagtggttatctctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2044 2043 M02948:180:000000000-JFBGH:1:2117:25195:17192_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1075 100.00 215/215 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 183 84.31 43/51 nt Homsap IGHD5-24*01 ORF 3 8 8 10 8.8.10 [0.17.38.11] CARHSYNLGFSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) ctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattcctacaatttgggattctcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 309 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2045 2044 M02948:180:000000000-JFBGH:1:2117:2437:17278_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD7-27*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARGQYHPLGRNYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaggggccaataccaccccctcgggaggaactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2046 2045 M02948:180:000000000-JFBGH:1:2117:13724:18025_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-15*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARHGPRYCSGGSCSHMQYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctctcctggtgactctgataccagatatagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgggcccagatattgtagtggtggtagctgctcccatatgcaatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2047 2046 M02948:180:000000000-JFBGH:1:2117:3991:18370_1:N: No rearrangement found Homsap IGHV5-51*05 F 984 95.77 204/213 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 302 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2048 2047 M02948:180:000000000-JFBGH:1:2117:24242:19085_1:N productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1041 95.18 217/228 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 3 8 10 20 8.10.20 [3.17.38.11] CTPAEDIVVVPADYYYYGMDVW in-frame + gcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcgaatgaacagcctgaaaaccgaggacacagccgtgtattactgtacccccgccgaggatattgtagtagtaccagcggactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2049 2048 M02948:180:000000000-JFBGH:1:2117:26309:20591_1:N productive (see comment) Homsap IGHV3-69-1*01 P, or Homsap IGHV3-69-1*02 P (see comment) 432 75.82 116/153 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 2 X 8 14 X.8.14 [X.6.38.11] CAKGSHVSGTYYLDNW in-frame + however the closest V is a pseudogene low V-REGION identity (75.82%); the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (8 AA in M02948:180:000000000-JFBGH:1:2117:26309:20591_1:N; 7 AA in Homsap IGHV3-69-1*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ctatgcgccttgccagcccgctcagtctctatgcggggaattctcacaggagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccatatattactgtgcgaaaggatcccatgtttcgggaacttattatcttgacaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 262 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2050 2049 M02948:180:000000000-JFBGH:1:2117:15290:21854_1:N productive Homsap IGHV3-7*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARGTVGATIPDYW in-frame + tgcagcctctggattcacctttagtaactattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaggaactcagtgtatctacaaatgaacagcctcagagccgaggacacggccgtgtattactgtgcgagagggacagtgggagctactatacctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2051 2050 M02948:180:000000000-JFBGH:1:2116:13430:2278_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD4-23*01 ORF 3 8 8 15 8.8.15 [2.17.38.11] CARGSSTVVTPDAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaagttctacggtggtaactccggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2052 2051 M02948:180:000000000-JFBGH:1:2116:11413:2550_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 987 94.52 207/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD6-19*01 F 1 8 8 17 8.8.17 [2.17.38.11] CATHSSLSTGYYYYYMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgacccatagcagtctaagtactggctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2053 2052 M02948:180:000000000-JFBGH:1:2116:19475:2868_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-19*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARQAVAGHYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaagcagtggctgggcactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2054 2053 M02948:180:000000000-JFBGH:1:2116:13996:5392_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARLIRSSITRHFDYW in-frame + aagggttctggatacagctttaccaactactggatcggttgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcaccaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgttttactgtgcgagactgattcgtagtagtattacccgccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2055 2054 M02948:180:000000000-JFBGH:1:2116:9535:6431_1:N:0 productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARDTNYYDSRGYYGVPDDFW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatacgaattactatgatagtcgtggttattacggcgtgcccgatgacttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2056 2055 M02948:180:000000000-JFBGH:1:2116:13039:6565_1:N: productive Homsap IGHV3-7*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARFIQGVAATDYW in-frame + tgcagcctctggattcacctttagaagctattggatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaactgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaaggactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgtgcgagatttattcagggggtagctgccactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2057 2056 M02948:180:000000000-JFBGH:1:2116:17010:6653_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 7 10 8.7.10 [3.17.38.11] CARDNRGYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagataaccgtgggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2058 2057 M02948:180:000000000-JFBGH:1:2116:24976:6814_1:N: productive Homsap IGHV1-8*01 F 1105 100.00 221/221 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-19*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARSHRGGAWRRYYYYGMDVW in-frame + aggcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatcacacagaggcggggcctggcgtcggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2059 2058 M02948:180:000000000-JFBGH:1:2116:9133:6913_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARDSHGDYGIDYW in-frame + cactgtctctggtggctccatcagtacttactactggacctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattcgcacggtgactacggaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2060 2059 M02948:180:000000000-JFBGH:1:2116:9833:9202_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARAGITIFGVVIYYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcggggattacgatttttggagtggtcatttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2061 2060 M02948:180:000000000-JFBGH:1:2116:17220:9280_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-10*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARGKESSYYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagggggaaggagagttcctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2062 2061 M02948:180:000000000-JFBGH:1:2116:13062:9958_1:N: productive Homsap IGHV1-18*01 F, or Homsap IGHV1-8*02 F 960 93.15 204/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD2-15*01 F 3 8 8 13 8.8.13 [2.17.38.11] CAREAAPQDYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggctgctccccaggactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2063 2062 M02948:180:000000000-JFBGH:1:2116:22945:10012_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ6*04 F (see comment) 171 74.60 47/63 nt Homsap IGHD3-10*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARRLNGSGRGMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagacgcctaaatggttcgggtaggggcatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtacatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2064 2063 M02948:180:000000000-JFBGH:1:2116:21531:10821_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-10*01 F 2 8 8 18 8.8.18 [3.17.38.11] CAKGPNRFYGSGRDEYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaggggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggccgtatattactgtgcgaaaggcccgaatcgtttctatggttcggggagagatgaatactttgactactggggccagggaaacctggtcaccgtctcctcagggagtgcaaccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2065 2064 M02948:180:000000000-JFBGH:1:2116:27118:11769_1:N No rearrangement found Homsap IGHV7-4-1*01 F 1023 96.35 211/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggatacaccttcactagctatgctatgaattgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaacaccaacactgggaacccaacgtatgcccagggcttcacaggacggtttgtcttctccttggacacctctgtcagcacggcatatctgcagatctgcagcctaaaggctgaggacactgccgtgtccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 301 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2066 2065 M02948:180:000000000-JFBGH:1:2116:18145:11996_1:N productive Homsap IGHV3-48*03 F 1042 99.06 210/212 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD6-6*01 F 3 7 8 15 7.8.15 [X.17.38.11] CARDAQLETYYYGMDVW in-frame + gattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagacgctcagctcgagacctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 321 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2067 2066 M02948:180:000000000-JFBGH:1:2116:13163:12036_1:N unproductive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-15*01 F 1 8 8 X 8.8.X [3.17.38.11] CARDGDIVVVVAATT#NWFDPW out-of-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagtcattagtgggagtggtggtaccacatactacgcagactccgtgaagggccggttcaccatctccagagacaactccaagaacacactgcatctgcaaatgatcagcctgagagccggggacacggccgtatattactgtgcgagagatggggatattgtagtggtggtagctgctacgacggaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 376 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2068 2067 M02948:180:000000000-JFBGH:1:2116:11576:12271_1:N productive Homsap IGHV3-9*02 F 1007 94.62 211/223 nt Homsap IGHJ6*02 F 190 82.14 46/56 nt Homsap IGHD2-15*01 F 2 8 8 11 8.8.11 [3.17.38.11] CAKDISPGGMDVW in-frame + tgcagcctctggattcacctctaatgattatgccatgcactgggtccggcaagttccagggaagggcctggagtgggtcggaggtatttactggaatagtggtaggataggatatgcggactctgtgaagggccgattcaccatcttcagagacaacgccaagaactctctgtatttgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatattagtcctggcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2069 2068 M02948:180:000000000-JFBGH:1:2116:4650:12316_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1064 98.18 216/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 3 8 7 12 8.7.12 [3.17.38.11] CAKRAVVAANIDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagttggtctcatctatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaacgggcggtggtagctgctaacattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2070 2069 M02948:180:000000000-JFBGH:1:2116:28370:12400_1:N productive (see comment) Homsap IGHV4-39*07 F 1064 98.18 216/220 nt 97.73 215/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 3 8 7 20 8.7.20 [3.17.38.11] CARGLKQLGRVVMTTQYYFDYW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 31 of V-REGION: 6 nucleotides (from position 23 in the user submitted sequence), (do not cause frameshift) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcttaaaacagctggggagagtggttatgaccacacagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2071 2070 M02948:180:000000000-JFBGH:1:2116:4232:12706_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-7*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARHLGLRLEIDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacctgggattacgtttggagattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2072 2071 M02948:180:000000000-JFBGH:1:2116:12466:14425_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ2*01 F 211 88.68 47/53 nt Homsap IGHD3-22*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARVTRYYFDSSGQHAFGKFDLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagtaacgcggtattactttgatagtagtggtcaacacgcgtttgggaagttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2073 2072 M02948:180:000000000-JFBGH:1:2116:3125:14915_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1148 96.72 236/244 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-10*01 F 1 8 8 16 8.8.16 [10.17.38.11] CARVAFGELLPATYFDYW in-frame + ggggtccctgagactctcctgtgcagcctctggatttacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagttgcgttcggggagttattacccgcgacttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2074 2073 M02948:180:000000000-JFBGH:1:2116:7386:14995_1:N: unproductive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ1*01 F (see comment) 156 78.43 40/51 nt Homsap IGHD5-12*01 F 1 8 7 X 8.7.X [3.17.38.11] CARL*R*G#W out-of-frame + rearranged sequence, stop codons other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccgccagcccccagggaaggggctggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagactatagcggtgaggaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2075 2074 M02948:180:000000000-JFBGH:1:2116:10750:16196_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1088 98.65 220/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARYFVGRYYYYGMDVW in-frame + tgcagcctctggattcaccttcactagctatagcataaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtactagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaggtatttcgtagggcgatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2076 2075 M02948:180:000000000-JFBGH:1:2116:13452:17384_1:N productive Homsap IGHV1-8*02 F 987 94.52 207/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARSGVGNYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaatacaggctatgcacagaacttccagggcagagtcaccgtgaccaggaacacctccataagcacaacctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaagtggtgtgggtaactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2077 2076 M02948:180:000000000-JFBGH:1:2116:13857:18063_1:N productive Homsap IGHV3-7*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F (see comment) 231 97.92 47/48 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARWGYTNGRYYFDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcatctttagtagccattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagctagatggaagtgcgaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgcccagagctcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtctattactgtgcgagatggggttataccaatggccggtactactttgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2078 2077 M02948:180:000000000-JFBGH:1:2116:27386:18322_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 983 94.09 207/220 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD5-18*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARTDTAMAYYYYMDVW in-frame + ctctgtctctgctggctcaatcagtacttactactggagctggatccgccagcccccagggaagggactggagtggattggatatgtccattacagtgggctcaccgactacaacccctccctcaagagtcgagtcaccatgtctgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggacggatacagctatggcgtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2079 2078 M02948:180:000000000-JFBGH:1:2116:6322:18340_1:N: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1100 97.82 224/229 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 10 14 8.10.14 [3.17.38.11] CTSRRDWYDSNGYDYW in-frame + tgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacactatatctgcaaatgaacagcctgagaaccgaggatacagccgtgtattactgcacctccaggcgggattggtatgatagtaatggttatgattattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2080 2079 M02948:180:000000000-JFBGH:1:2116:9527:19225_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD3-10*01 F 1 8 7 18 8.7.18 [3.17.38.11] CAREGETWFGELSHYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagagggggagacgtggttcggggagttaagccactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2081 2080 M02948:180:000000000-JFBGH:1:2116:25496:20231_1:N productive Homsap IGHV1-8*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARVMSTLTPIDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagttatgtcgactttaacacctattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2082 2081 M02948:180:000000000-JFBGH:1:2116:26535:20613_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARGHMVGATISDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccacatggtgggagctacgatttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2083 2082 M02948:180:000000000-JFBGH:1:2116:5422:20878_1:N: productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD5-12*01 F 3 9 7 17 9.7.17 [3.17.38.11] CARDRGGYSGYDRDAFDIW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagatcgaggtggatatagtggctacgatcgtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2084 2083 M02948:180:000000000-JFBGH:1:2116:5452:21565_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-15*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARGVALSPTDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggggtggctttaagcccgaccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2085 2084 M02948:180:000000000-JFBGH:1:2116:19589:21688_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 1 8 7 12 8.7.12 [3.17.38.11] CARVGATTSDFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtgggagctactacgtcggattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2086 2085 M02948:180:000000000-JFBGH:1:2116:13178:21887_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD5-12*01 F 2 8 7 9 8.7.9 [3.17.38.11] CARSRRFLDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaagccgacgatttctggacgtctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2087 2086 M02948:180:000000000-JFBGH:1:2116:25795:22406_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD6-13*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARVAAAGPFYYYYYYYMDVG in-frame + TRP 118 not identified gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtagcagcagctggtcccttctattactactactactactacatggacgtcgggggcaaagggaccgcggtcaccggctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgaaaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2088 2087 M02948:180:000000000-JFBGH:1:2116:13924:25178_1:N productive Homsap IGHV1-18*01 F 1059 98.17 215/219 nt Homsap IGHJ6*02 F (see comment) 202 80.65 50/62 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARGSGSSVHGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccaactatgatatcagctgggtgcgacaggcccctggacaagggcttgagtgggtgggatggatcagcgctcacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagggagtgggagctcggttcacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2089 2088 M02948:180:000000000-JFBGH:1:2101:12614:2554_1:N: productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 8 8 17 8.8.17 [2.17.38.11] CAKVGTTITTYYYHYMDVW in-frame + gcttctggttacacctttaccagttatggtatcacctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtatattactgtgcgaaagtggggactacaataactacgtactactatcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2090 2089 M02948:180:000000000-JFBGH:1:2101:22260:4558_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD2-2*02 F 2 8 8 25 8.8.25 [2.17.38.11] CARDAHTRYCSSTSCYTDYYYYYMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatgcccacactcgatattgtagtagtaccagctgctatacggactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2091 2090 M02948:180:000000000-JFBGH:1:2101:7728:4741_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD3-3*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARLGRNYDFWSPYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactggggaggaattacgatttttggagtccctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2092 2091 M02948:180:000000000-JFBGH:1:2101:12629:5879_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD2-2*01 F 1 8 8 12 8.8.12 [3.17.38.11] CATDCLGLNWFDPW in-frame + tgcagcctctggattcatcttcagtagctataccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcaacagattgtctaggcctcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2093 2092 M02948:180:000000000-JFBGH:1:2101:23324:8544_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-22*01 F 2 8 8 23 8.8.23 [3.17.38.11] CARRHYYDSGGYQRGSYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagatgaggacacggctctgtattactgtgcgagaaggcattactacgatagtggtggttatcaaaggggttcttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2094 2093 M02948:180:000000000-JFBGH:1:2101:21114:8993_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 246 98.04 50/51 nt 8 8 8 8.8.8 [3.17.38.11] CAKNYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2095 2094 M02948:180:000000000-JFBGH:1:2101:5886:9408_1:N:0 productive Homsap IGHV3-33*08 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARDLYSGSFDYW in-frame + tgcagcctctggattcaccttcagtaaatatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatttgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatctctatagtgggagctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2096 2095 M02948:180:000000000-JFBGH:1:2101:11763:10160_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKEMLVVSVGVLCYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagagatgttagtggtttctgttggtgtcctgtgctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2097 2096 M02948:180:000000000-JFBGH:1:2101:11181:10632_1:N No rearrangement found Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 818 93.05 174/187 nt 92.51 173/187 nt 8 8 X 8.8.X [3.17.26.X] + no rearrangement found in FR3-IMGT, from codon 87 of V-REGION: 36 nucleotides (from position 170 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaattccaagaacaccacggctgtggattactgtgcgagagacactaggagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 265 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2098 2097 M02948:180:000000000-JFBGH:1:2101:25311:10834_1:N productive Homsap IGHV3-48*04 F 989 93.72 209/223 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD2-2*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKGGGASFYYYMDVW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggggaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgttaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctacaaatgaacagcctgagagccgaggacacggccacatattcctgtgcgaaaggcggaggagcatcattctactactacatggacgtctggggcagagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2099 2098 M02948:180:000000000-JFBGH:1:2101:16246:10947_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1023 96.35 211/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*02 F 2 8 8 20 8.8.20 [2.17.38.11] CARAGCSSTSCYTWGHDAFDIW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcaggatgtagtagtaccagctgctatacttgggggcatgatgcttttgatatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2100 2099 M02948:180:000000000-JFBGH:1:2101:23965:11741_1:N productive Homsap IGHV4-38-2*01 F 1106 99.55 222/223 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-22*01 F 2 9 7 17 9.7.17 [3.17.38.11] CARTYYYDSSGYFNWFDPW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagaacgtattactatgatagtagtggttatttcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2101 2100 M02948:180:000000000-JFBGH:1:2101:10543:12438_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1088 98.65 220/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARDSPGWVEGYYYYGMDVW in-frame + tgcagcgtctggattcaccttcaggagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatattatgcagactccgtgaagggccgattcaccatctccagagacacttccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagattctccgggttgggtagaaggttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2102 2101 M02948:180:000000000-JFBGH:1:2101:27987:13118_1:N productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1150 100.00 230/230 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD5-24*01 ORF 3 10 9 19 10.9.19 [2.17.38.11] CARERRGVRRDGYTQAGMDVW in-frame + ccatctccggggacagtgtctctagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagagaacgaaggggggtacgtagagatggctacacccaggccggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 382 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2103 2102 M02948:180:000000000-JFBGH:1:2101:27801:13288_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F (see comment) 220 83.87 52/62 nt Homsap IGHD6-6*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARHGSWSYFYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatggcagctggtcctatttctacggtatggacgtctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2104 2103 M02948:180:000000000-JFBGH:1:2101:7842:14332_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-14*01 ORF 2 8 8 9 8.8.9 [3.17.38.11] CAKDTGPLDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatacgggaccattagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2105 2104 M02948:180:000000000-JFBGH:1:2101:10985:15133_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-3*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARAPAYDYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagccagagatctgaggacacggccgtgtattactgtgcgagagctcccgcttacgattattactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2106 2105 M02948:180:000000000-JFBGH:1:2101:10221:15518_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-10*01 F 1 8 8 18 8.8.18 [3.17.38.11] CARADRYGGRFGELLNMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagccgaccggtatgggggcaggttcggggagttattaaacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2107 2106 M02948:180:000000000-JFBGH:1:2101:5764:15726_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARHGETERYDSGPITYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatggcgaaacggagcggtatgatagtggacccattacctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2108 2107 M02948:180:000000000-JFBGH:1:2101:18806:16132_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-24*01 ORF 3 8 8 15 8.8.15 [2.17.38.11] CARDGPGEDGYNAIDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgggcctggtgaagatggctacaacgcgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2109 2108 M02948:180:000000000-JFBGH:1:2101:14059:17739_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-12*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARVRDAYYGGYDYSDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattactagtagtagtagttccatataccacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacgggtgtgtattactgtgcgagagtacgagatgcctattatggtggctacgactattctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2110 2109 M02948:180:000000000-JFBGH:1:2101:10767:17789_1:N productive Homsap IGHV3-9*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 12 8.8.12 [3.17.38.11] CAKDMEVAGAFDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagcggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacaatctgagagctgaggacacggccttgtattactgtgcaaaagatatggaagtggctggagcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2111 2110 M02948:180:000000000-JFBGH:1:2101:7814:18817_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARHSRAGGGRRMVYAIDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattcacgggcgggaggcggtcgcagaatggtgtatgctattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2112 2111 M02948:180:000000000-JFBGH:1:2101:14688:19929_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARQEAAARLVVDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaggaagcagcagcccgcttggtggtggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2113 2112 M02948:180:000000000-JFBGH:1:2101:25785:22307_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD7-27*01 F 3 8 8 8 8.8.8 [3.17.38.11] CVKGDWGDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgtgaaaggggactggggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2114 2113 M02948:180:000000000-JFBGH:1:2101:19605:22330_1:N productive Homsap IGHV3-7*01 F 1097 99.10 221/223 nt Homsap IGHJ4*03 F (see comment) 168 83.33 40/48 nt Homsap IGHD3-9*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARLILNYAILTGHMDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagctgaggacacggctgtatattactgtgcgaggctaatacttaattacgctattttgactggccacatggacgtctggggcgaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2115 2114 M02948:180:000000000-JFBGH:1:2101:16237:22581_1:N productive Homsap IGHV3-7*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD6-19*01 F 1 8 8 9 8.8.9 [3.17.38.11] CARGSGSMYSW in-frame + tgcagcctctggattcacctttagcaactatctgatgagttgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaagtgagaaaaactatgtggactctgcgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagacgaagacacggctatgtattactgtgcgaggggcagtgggtcgatgtatagctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2116 2115 M02948:180:000000000-JFBGH:1:2101:10544:22603_1:N productive Homsap IGHV1-69*13 F 1172 99.16 236/238 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-9*01 F 1 8 8 12 8.8.12 [8.17.38.11] CARGHFATYGMDVW in-frame + agtgaaggtctcctgcaaggcttccggaggcaccttcaacagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggacattttgcaacctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2117 2116 M02948:180:000000000-JFBGH:1:2101:11214:24363_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-13*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARRSIAAWGYYYYGMDVW in-frame + tacagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaaggtcgattgccgcatggggatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2118 2117 M02948:180:000000000-JFBGH:1:1119:22546:2631_1:N: productive Homsap IGHV1-2*02 F 1043 96.41 215/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDRWGSGYYPYYGMDVW in-frame + tgcagcctctggattcaccttcaccggctactataagcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggggctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagaccggtggggtagtggttattacccctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2119 2118 M02948:180:000000000-JFBGH:1:1119:23247:2731_1:N: unproductive (see comment) Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 944 91.48 204/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAREGVYCSGGSCHYFDYW in-frame + rearranged sequence, stop codons tgcagcctctggattcaccttcagtagctactgggtgcacttggtccgctaagctccaggggaggggctggtgtcggtctgacgtattaagagtgatgagagtagtatacggtatgcggattccgtgaagggctgattcaccacctccagagacaacggcaagaacacggtgtatctgcaaatgaacagtctgagagccgagtacacggctgtgtattactgtgcaagagagggggtatattgtagtggtggtagctgccactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2120 2119 M02948:180:000000000-JFBGH:1:1119:22216:2796_1:N: productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARDRVSRWYFDLW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcgagttagtaggtggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2121 2120 M02948:180:000000000-JFBGH:1:1119:21144:2911_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 1 8 7 12 8.7.12 [3.17.38.11] CARGDTAMVPVDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggggatacagctatggtccctgttgactactggggccaggaaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2122 2121 M02948:180:000000000-JFBGH:1:1119:22436:3966_1:N: productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 3 8 8 7 8.8.7 [3.17.38.11] CARRGFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaaggggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2123 2122 M02948:180:000000000-JFBGH:1:1119:19245:4120_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69*20 (F) 1086 99.54 218/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD5-18*01 F 3 8 8 20 8.8.20 [2.17.38.11] CAREPFLGYSYGYPDYNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaaggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagccgttccttggatacagctatggttaccctgattacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2124 2123 M02948:180:000000000-JFBGH:1:1119:7547:4245_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1052 96.86 216/223 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD3-10*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARWFGEDLSYYMDVW in-frame + tgcagcctctgaattcacctttagcagctctgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagatggttcggggaggacttgagctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2125 2124 M02948:180:000000000-JFBGH:1:1119:19064:5409_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARQPAADYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaaccagctgctgactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2126 2125 M02948:180:000000000-JFBGH:1:1119:15142:5545_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARVARSTSCYDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtggcgcgtagtaccagctgctacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2127 2126 M02948:180:000000000-JFBGH:1:1119:25498:5665_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt 8 8 8 8.8.8 [3.17.38.11] CARDWHFDLW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagggactggcacttcgatctctggggccgtggcaccctggtcactatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2128 2127 M02948:180:000000000-JFBGH:1:1119:12254:6033_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [2.17.38.11] CAAYCSGGSCYWVGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggcttattgtagtggtggtagctgctactgggtcggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2129 2128 M02948:180:000000000-JFBGH:1:1119:5709:6147_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD7-27*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARQLGYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagacaactaggctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2130 2129 M02948:180:000000000-JFBGH:1:1119:14387:6300_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 184 90.91 40/44 nt 8 8 5 8.8.5 [3.17.38.11] CASPVYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagccccgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2131 2130 M02948:180:000000000-JFBGH:1:1119:28043:7160_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD6-13*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARDIPAGTSYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatattcccgctggtacgtcatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2132 2131 M02948:180:000000000-JFBGH:1:1119:15143:7532_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD4-17*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDRNDGDYVGYFDLW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagataggaatgacggtgactacgtcgggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2133 2132 M02948:180:000000000-JFBGH:1:1119:3812:9122_1:N:0 productive Homsap IGHV3-48*01 F 1070 97.76 218/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2134 2133 M02948:180:000000000-JFBGH:1:1119:4610:9716_1:N:0 productive Homsap IGHV3-48*03 F, or Homsap IGHV3-48*04 F 1043 96.41 215/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-26*01 F 3 8 8 17 8.8.17 [3.17.38.11] CARDTGGQYSGSRGAFDIW in-frame + tgcagcctctggattcaccctcagtagttatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtggtggtagtgtcatatactacgcagactctgtgaagggccgactcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagataccgggggccagtatagtgggagcaggggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2135 2134 M02948:180:000000000-JFBGH:1:1119:6263:10025_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 1005 95.43 209/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-19*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARVGIAVAGNFGDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtgggtatagcagtggctggtaattttggtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2136 2135 M02948:180:000000000-JFBGH:1:1119:11842:10262_1:N productive Homsap IGHV1-2*02 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD3-9*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARDRNILRYFDWLPPGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtctattactgtgcgagagaccgtaacatattacgatattttgactggttacctcccggatattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2137 2136 M02948:180:000000000-JFBGH:1:1119:29418:11977_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-12*01 F 1 8 8 17 8.8.17 [3.17.38.11] CVAWTVDIVATILGGFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtgctagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgttgcttggaccgtggatatagtggctacgatccttgggggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2138 2137 M02948:180:000000000-JFBGH:1:1119:6505:12271_1:N: productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F (see comment) 179 77.05 47/61 nt Homsap IGHD3-3*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARDAAFGVVMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccattaccacaggcacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatgccgcttttggagtggttatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2139 2138 M02948:180:000000000-JFBGH:1:1119:13815:12503_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARGGVDYYDSSSPYYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggcggggtcgattactatgatagtagttctccctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2140 2139 M02948:180:000000000-JFBGH:1:1119:13931:12715_1:N productive Homsap IGHV1-2*02 F 1059 98.17 215/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-21*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDWGLWGGGSHFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatatgcagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagaaggctgagatctgacgacacggccgtgtattactgtgcgagagattggggcctatggggcggtggtagccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2141 2140 M02948:180:000000000-JFBGH:1:1119:10484:12771_1:N productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 238 94.34 50/53 nt Homsap IGHD5-24*01 ORF 1 8 8 9 8.8.9 [2.17.38.11] CAREEYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagagaagagtacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2142 2141 M02948:180:000000000-JFBGH:1:1119:19450:13031_1:N productive (see comment) Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 872 87.89 196/223 nt 87.44 195/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDFSHYGVVIKSDYW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT at codon 40 of V-REGION: 'TACTGG' (6 nucleotides at position 38 to 43 in the user submitted sequence), (do not cause frameshift); cactgtctctggagtctccgtcagcagtagtagttacTACTGGagctggatccggcagcccccagggatgggactggagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagagccgaggacacggccgtgtattactgtgcgagagatttctcccattacggagtggttattaagagtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2143 2142 M02948:180:000000000-JFBGH:1:1119:28342:13640_1:N productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARVEGYCSGGSCYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagtagagggatattgtagtggtggtagctgctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2144 2143 M02948:180:000000000-JFBGH:1:1119:15318:13904_1:N productive Homsap IGHV3-21*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-16*02 F 2 8 8 11 8.8.11 [3.17.38.11] CARVGSERVFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacagctgtgtattactgtgcgagagtcggcagtgaacgagtgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2145 2144 M02948:180:000000000-JFBGH:1:1119:19834:14150_1:N productive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1097 99.10 221/223 nt 98.65 220/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARQGYSDSSGYYDW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT at codon 57 of V-REGION: 'AGT' (3 nucleotides at position 89 to 91 in the user submitted sequence), (do not cause frameshift); tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattAGTagtagtagtagtagttacatatactacgcagactccgtgaagggccgattcagcatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagacaaggttactctgatagcagtggttattatgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2146 2145 M02948:180:000000000-JFBGH:1:1119:2767:14663_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDIPTGWFTDYW in-frame + tgcagcctctggattccccttcagtaacttctggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatcctgatgggagtggcacatcctacgcggactccgtgaagggccgattcaccatctccagggacaacgccaagaacacgctgtatctgcaaatgaacggtctgagagccgaggacacggctctgtattactgtgcaagagatatccccactggctggtttactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2147 2146 M02948:180:000000000-JFBGH:1:1119:4282:15335_1:N: productive Homsap IGHV3-7*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARREDYGDYVFLGYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctatgtattactgtgcgagaagggaggactacggtgactacgttttcctaggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2148 2147 M02948:180:000000000-JFBGH:1:1119:7191:15869_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARRTLLKWELGNLFFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggacattgttaaagtgggagctaggtaacctcttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2149 2148 M02948:180:000000000-JFBGH:1:1119:24187:16248_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKDSPHSGYHTGDFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagacagcccgcacagtggttaccataccggggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2150 2149 M02948:180:000000000-JFBGH:1:1119:12226:16882_1:N productive Homsap IGHV3-7*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARDTAHKPFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagagggtggccaacataaagtcagatggaagtaaaaaagactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatacagcccataagccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2151 2150 M02948:180:000000000-JFBGH:1:1119:28226:16906_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 260 91.80 56/61 nt Homsap IGHD1-14*01 ORF 1 8 8 12 8.8.12 [2.17.38.11] CARGSTYYYYMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggtccacttactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2152 2151 M02948:180:000000000-JFBGH:1:1119:13901:17169_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-1*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARQRGMNDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagaggggaatgaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2153 2152 M02948:180:000000000-JFBGH:1:1119:5587:17785_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 881 88.34 197/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARFIQGVAATDYW in-frame + tgcagcctctggactcatcttgagcagccgtgccatgtgctgggtccgccaggctgcagggaaggggctggagtgggtcgcatctcttagtaaaggtggtgataccacatattatgcagagtccgtgaggggccgattcaccatctccagagacaattccaagaacacactgtatctacaaatgaacagcctgagagccgaggacacggctgtgtattattgtgcgagatttattcagggggtagctgccactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2154 2153 M02948:180:000000000-JFBGH:1:1119:13513:18841_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARETRQWLDEGDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagagactcggcagtggctagatgagggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2155 2154 M02948:180:000000000-JFBGH:1:1119:14325:19206_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARPQYYDSSGYYYNDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaccgcaatactatgatagtagtggttattactacaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2156 2155 M02948:180:000000000-JFBGH:1:1119:15840:19387_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKLSGSGNYYPFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaattgagcggttcggggaattattatccgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2157 2156 M02948:180:000000000-JFBGH:1:1119:18020:19425_1:N productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARGGWIQLWLAGFDYW in-frame + gcttctggtggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggggttggatacagctatggttagcgggatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2158 2157 M02948:180:000000000-JFBGH:1:1119:4351:19631_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARQSSAGNSYDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaaagtagtgctggtaactcctacgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2159 2158 M02948:180:000000000-JFBGH:1:1119:6449:19949_1:N: unproductive (see comment) Homsap IGHV1-18*01 F (see comment) 1050 97.72 214/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-3*01 F 1 8 8 X 8.8.X [2.17.38.11] *FGS#NWFDPW out-of-frame + rearranged sequence, stop codons 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtatccttaatttgggagtgcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 340 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2160 2159 M02948:180:000000000-JFBGH:1:1119:21077:20248_1:N productive Homsap IGHV1-8*01 F 1014 95.89 210/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-10*01 F 3 8 8 23 8.8.23 [2.17.38.11] CARDPDITMVRGVIINYYYYGMDVW in-frame + gcttctggatacaccttcaccatttctgatatcaactgggtgcgacaggccactggacaaggacttgagtggatgggatggatgagccctaacactggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcccgatattactatggttcggggagttattataaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2161 2160 M02948:180:000000000-JFBGH:1:1119:22722:20297_1:N productive Homsap IGHV3-7*03 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F, or Homsap IGHJ6*03 F (see comment) 195 82.46 47/57 nt Homsap IGHD6-19*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARYSSGYMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagctgaggacacggccgtgtattactgtgcgagatatagcagtggctatatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2162 2161 M02948:180:000000000-JFBGH:1:1119:7092:20567_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARSSWFGELFRYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatcttcatggttcggggagttattccggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2163 2162 M02948:180:000000000-JFBGH:1:1119:14783:21417_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 10 7 14 10.7.14 [3.17.38.11] CARIVNYYGSGSYDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaatcgttaattactatggttcggggagttatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2164 2163 M02948:180:000000000-JFBGH:1:1119:8967:24109_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD5-18*01 F 1 8 7 19 8.7.19 [3.17.38.11] CARGVDTDNFELGHYWYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggtgtggatacggacaactttgaattgggccactactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2165 2164 M02948:180:000000000-JFBGH:1:1119:16547:24642_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 962 92.38 206/223 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [3.17.38.11] CTRDRGYCSSTSCSGWFDPW in-frame + tgcagcctctggattcacctttagcagctatgctatcagctgggttcgacaggctcctgcacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtacgagagatcggggttattgtagtagtaccagctgctctggttggttcgacccctggggccagagaaccctggtcaccgtctcctcagggagtgcatccgccacaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2166 2165 M02948:180:000000000-JFBGH:1:1116:21521:2157_1:N: No rearrangement found Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtatattactgtgcgcgagatggtcaatgtagtagtggtgccacttgccacctgtgagaattcccctcgcgatat 0 0 286 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2167 2166 M02948:180:000000000-JFBGH:1:1116:10265:3243_1:N: No rearrangement found Homsap IGHV3-7*01 F 1115 100.00 223/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagccgggagtagtgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 303 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2168 2167 M02948:180:000000000-JFBGH:1:1116:13785:3446_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD6-19*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARDGGQWLVTPFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatggggggcagtggctggtaacccctttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2169 2168 M02948:180:000000000-JFBGH:1:1116:13966:3581_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1010 95.45 210/220 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARGRGDYGDYYRFDYW in-frame + other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtccttcagtgattactactggacctggatccgccagcccccagggaagggactggagtggattggggaaatcaatcatagtggagacaccaagtgcaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaacttgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgaggtgactacggtgactactatcgctttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2170 2169 M02948:180:000000000-JFBGH:1:1116:19266:5559_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt 8 8 8 8.8.8 [3.17.38.11] CARDLNFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatttaaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2171 2170 M02948:180:000000000-JFBGH:1:1116:10135:5807_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1032 96.80 212/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD6-6*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARTSSSSHYYGMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatgaaccttagtggtggtagtacaagatatgcacagaggttccagggcagagtcaccatgaccagggacacgtccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgcgaactagcagctcgtcccactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2172 2171 M02948:180:000000000-JFBGH:1:1116:27958:6840_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-15*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARDRWRVVYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagataggtggagggtggtatacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2173 2172 M02948:180:000000000-JFBGH:1:1116:3789:7096_1:N:0 productive Homsap IGHV4-59*12 (F), or Homsap IGHV4-61*06 ORF 931 99.47 187/188 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD7-27*01 F 3 0 7 14 0.7.14 [X.17.38.11] CARDLWGSLSWYFDLW in-frame + actggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagacctctggggatccctcagctggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 294 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2174 2173 M02948:180:000000000-JFBGH:1:1116:7625:8146_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-2*01 F 2 8 8 16 8.8.16 [2.17.38.11] CASCSSTSCLNYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagttgtagcagtaccagctgcctcaactactacggtatggacgtctggggccaagggaccacagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2175 2174 M02948:180:000000000-JFBGH:1:1116:2635:9843_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1064 98.18 216/220 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-26*01 F 1 8 7 9 8.7.9 [3.17.38.11] CARLVIEGDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatactggaagcaccaagtacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttcaccctgaagctgagttctgtgaccgccgcggacacggctgtgtattactgtgcgagattagttatagagggggactactggggccagggaatcctggtcaccgtctcctcagggagtgcatccgccccaacccttttacccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2176 2175 M02948:180:000000000-JFBGH:1:1116:28185:10046_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-16*01 F 3 8 7 10 8.7.10 [3.17.38.11] CAGGGRARFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatacttcgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtatttctgtgcgggaggggggcgggctagatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2177 2176 M02948:180:000000000-JFBGH:1:1116:22557:10051_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 718 94.94 150/158 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 1 X 8 12 X.8.12 [X.6.38.11] CATQVGATLYFGYW in-frame + ggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacacaagtgggagctaccctttattttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 258 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2178 2177 M02948:180:000000000-JFBGH:1:1116:16222:10772_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1020 95.50 212/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAREGYCSGGTCYSNFDYW in-frame + aagggttctggttacagttttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggctggggatcatctatcctagtgactctgaaaccagatacagcccgtccttccaaggccaggtctacatctcagtcgacaagtccatcagcaccgcctacctgcagtggagcagcctgagggcctcggacaccgccatgtattactgtgcgagggaaggctattgtagtggtggtacctgctactctaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2179 2178 M02948:180:000000000-JFBGH:1:1116:16875:10944_1:N productive Homsap IGHV1-2*04 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD2-2*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARGGCSSTSCYENWFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacaacacggccgtgtattactgtgcgagaggtggatgtagtagtaccagctgctatgaaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2180 2179 M02948:180:000000000-JFBGH:1:1116:10648:12690_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARHYDFWSGSDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattacgatttttggagtggttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2181 2180 M02948:180:000000000-JFBGH:1:1116:17487:13273_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 207 95.56 43/45 nt 8 8 6 8.8.6 [3.17.38.11] CARPFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2182 2181 M02948:180:000000000-JFBGH:1:1116:8086:13813_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-3*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAKGTSFYYDFWSGSGAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggaaccagtttttattacgatttttggagtggttccggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2183 2182 M02948:180:000000000-JFBGH:1:1116:12187:14315_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDRELPPYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagacagggagctacccccttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2184 2183 M02948:180:000000000-JFBGH:1:1116:5016:15074_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 175 81.13 43/53 nt Homsap IGHD1-1*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARDRGSWTRIYANGFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagataggggctcctggacccgtatttatgcaaatggattcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2185 2184 M02948:180:000000000-JFBGH:1:1116:14077:15104_1:N productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1095 100.00 219/219 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD2-21*01 F 3 8 8 16 8.8.16 [2.17.38.11] CAAPQEAIPPYYYYMDVW in-frame + gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggcgccacaggaggcgattccgccatactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2186 2185 M02948:180:000000000-JFBGH:1:1116:19096:16130_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 917 90.13 201/223 nt Homsap IGHJ6*03 F (see comment) 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKGSTYYYNYYCYMDVW in-frame + other possibilities: Homsap IGHJ6*04 and Homsap IGHJ6*01 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtctctgcaaatgaacagcctgagaaccgaggacacggccgtatattactgtgcgaaaggaagtacttattactacaactactactgctacatggacgtctggggcagagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2187 2186 M02948:180:000000000-JFBGH:1:1116:5711:18359_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-23*01 ORF 2 8 8 16 8.8.16 [3.17.38.11] CARDHVLYGGNAPDFDYW in-frame + aagggttctggatacagctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagaccacgtcctctacggtggtaatgcgccagactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2188 2187 M02948:180:000000000-JFBGH:1:1116:11655:18419_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1101 99.55 221/222 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARREFGGSYRFDPW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgcaatgtattactgtgcgagacgggaatttggtgggagctaccggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2189 2188 M02948:180:000000000-JFBGH:1:1116:4790:19149_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-12*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARGWLRSPPDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagggtggctacgttccccccccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2190 2189 M02948:180:000000000-JFBGH:1:1116:24204:19432_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [3.17.38.11] CAKDRNIVVVPASATPFDYW in-frame + tgcagcctctggattcacctttaacagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcgtaacattgtagtagtaccagcttccgctacaccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2191 2190 M02948:180:000000000-JFBGH:1:1116:7609:20133_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARDEYYYDSSGYFFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgagtattactatgatagtagtggttatttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2192 2191 M02948:180:000000000-JFBGH:1:1116:4536:20186_1:N: productive Homsap IGHV1-8*02 F 1041 97.26 213/219 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD3-10*01 F 1 8 8 25 8.8.25 [2.17.38.11] CARVPSNPTRRPPFGELLYPNRMFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtcccgagtaatcccacgcgccgaccgccgttcggggagttattatacccgaatcgaatgttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2193 2192 M02948:180:000000000-JFBGH:1:1116:14437:20614_1:N productive Homsap IGHV3-43D*04 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKDISRTYYYYAMDVW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtctctcttattagttgggatggtggtagcacatactatgcagactctgtgaagggtcgattcaccatctccagagacaacagcaaaaactccctgtatctgcaaatgaccagtctgagagctgaggacaccgccttgtattactgtgcaaaagatattagcaggacctactactactacgctatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2194 2193 M02948:180:000000000-JFBGH:1:1116:21740:21441_1:N unproductive (see comment) Homsap IGHV3-7*03 F 1096 93.55 232/248 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD4-11*01 ORF 2 8 8 15 8.8.15 [11.17.38.11] CAKDLGHSYYYYGMDVW in-frame + rearranged sequence, stop codons ctgggcggttcccgtgactctcctgtgcagcctcaggattctcctcatgtagctattggttgagctgggtccgccatgctccagggaaggggctgtagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgtcaagaactcactgtacctgcaaatgaacagcctgagagctgaggacacggccttgtattactgtgcaaaagatcttggccacagttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2195 2194 M02948:180:000000000-JFBGH:1:1116:14650:21520_1:N productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD5-18*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARRVYSYGSSYYMDVW in-frame + gcctctgggtacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcacttacaatggtaacacaaactatgcacagaagatccagggcagagtcaccatgaccacagacacatcaacgaacacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaggagagtttacagctatggttcttcctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2196 2195 M02948:180:000000000-JFBGH:1:1116:21326:21759_1:N productive Homsap IGHV3-21*04 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-16*02 F 3 8 8 9 8.8.9 [3.17.38.11] CAKGGWFGVCW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccggttcaccgtctccagagacaacgccaagaactcactgtatctgcagatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggggatggttcggggtctgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2197 2196 M02948:180:000000000-JFBGH:1:1116:19319:22726_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-3*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARPAPEIWGGYYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaggccggcccccgagatttggggtggctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2198 2197 M02948:180:000000000-JFBGH:1:1116:22131:22785_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 202 95.45 42/44 nt 8 8 5 8.8.5 [2.17.38.11] CASVDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2199 2198 M02948:180:000000000-JFBGH:1:1116:13394:23714_1:N productive Homsap IGHV1-18*04 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARGRDFWSGYLDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagggcgcgatttttggagtggttatcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2200 2199 M02948:180:000000000-JFBGH:1:1116:15214:24660_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 192 86.27 44/51 nt Homsap IGHD3-3*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARGPQILIWYYDFWKFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaggtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagaggccctcaaattcttatatggtattacgatttttggaagttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2201 2200 M02948:180:000000000-JFBGH:1:1115:23376:2172_1:N: productive Homsap IGHV4-59*12 (F) 1082 99.09 218/220 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD3-10*01 F 3 8 7 20 8.7.20 [3.17.38.11] CARGRAMVRGVIKYYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggagggctatggttcggggagttattaagtactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2202 2201 M02948:180:000000000-JFBGH:1:1115:10102:2392_1:N: productive Homsap IGHV4-61*01 F 1040 95.58 216/226 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-13*01 F 2 10 7 17 10.7.17 [3.17.38.11] CARGWIAGILAAADWFDPW in-frame + cactgtctctggtggctccgtcagcagtactagttattattggagctggttccggcagcccccagggaagggactggagtggattggttatatctcttacagtaggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaatcagttctccctgaagctgagctcagtgaccgctgcggacacggccgtgtattactgtgcgagaggttggatcgcaggtatactagcagctgctgactggttcgacccctggggccggggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2203 2202 M02948:180:000000000-JFBGH:1:1115:7159:4911_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 3 8 8 26 8.8.26 [2.17.38.11] CARRIAWGGSVVPAAIRVRYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaggatcgcctggggtggctcagtagtaccagctgctattagagtacgctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 392 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2204 2203 M02948:180:000000000-JFBGH:1:1115:18957:5437_1:N: No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctcccttaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 293 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2205 2204 M02948:180:000000000-JFBGH:1:1115:10668:6878_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1073 98.64 217/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-15*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARWCSGGSCYKTNYAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatttcagtagacacatccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtctattactgtgcgagatggtgtagtggtggtagctgctacaaaacgaattacgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2206 2205 M02948:180:000000000-JFBGH:1:1115:8674:7780_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*04 F 220 90.57 48/53 nt Homsap IGHD1-26*01 F 1 8 7 8 8.7.8 [3.17.38.11] CARYLGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggtatttgggaatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2207 2206 M02948:180:000000000-JFBGH:1:1115:16092:8850_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F (see comment) 737 84.39 173/205 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-25*01 F 2 5 8 16 5.8.16 [X.17.38.11] CARDGGRGLVVVTYFDYW in-frame + low V-REGION identity (84.39%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release atatcgcgaggggaattctcacaggagacgagggggaaaagggttggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggcggtaggggtctagtagtggttacttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 317 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2208 2207 M02948:180:000000000-JFBGH:1:1115:9596:9014_1:N:0 productive Homsap IGHV4-61*05 F (see comment) 1070 97.76 218/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD1-7*01 F 2 9 7 17 9.7.17 [3.17.38.11] CARAGRLELPYYYYYMDVW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR1-IMGT amino acid lengths (9 AA in M02948:180:000000000-JFBGH:1:1115:9596:9014_1:N:0; 10 AA in Homsap IGHV4-61*05): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagccggtaggctggaactaccctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2209 2208 M02948:180:000000000-JFBGH:1:1115:4767:9300_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-16*01 F 1 8 7 17 8.7.17 [3.17.38.11] CARSLRLRDPGYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggtccctacgattgagggaccccggatactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2210 2209 M02948:180:000000000-JFBGH:1:1115:23976:9748_1:N: productive (see comment) Homsap IGHV3-48*03 F (see comment) 1016 95.07 212/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt 8 8 25 8.8.25 [3.17.38.11] GGGGGGGGGGIAAAGTRGLYYYGMDVW (see V-DOMAIN Functionality comment) in-frame + IMGT/JunctionAnalysis gives no results for this JUNCTION 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcagcttcagtagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagccggggagccgaggacgtggctgtttattacgggggggggggggggggggggggggggggtatagcagcagctggtacgaggggcctctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 393 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2211 2210 M02948:180:000000000-JFBGH:1:1115:4341:10643_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD2-2*02 F 1 8 8 23 8.8.23 [2.17.38.11] CAGGEIGGYQLLYKDYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgggaggggagattggggggtaccagctgctatataaagattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2212 2211 M02948:180:000000000-JFBGH:1:1115:4390:10689_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1041 97.26 213/219 nt Homsap IGHJ1*01 F 260 100.00 52/52 nt Homsap IGHD2-21*02 F 2 8 8 17 8.8.17 [2.17.38.11] CARDTKGGDFLLAEYFQHW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatactaagggtggtgacttcctcctcgctgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2213 2212 M02948:180:000000000-JFBGH:1:1115:19560:12287_1:N productive Homsap IGHV4-34*03 F 1041 97.26 213/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD5-24*01 ORF 3 8 7 18 8.7.18 [3.17.38.11] CARQDRDGYDYDYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtgattactactggacctggatccgccagcccccagggaagggactggagtggattggggaaatcaatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacaggatagagatggctacgattatgactactattactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2214 2213 M02948:180:000000000-JFBGH:1:1115:5493:12929_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-18*01 F 3 8 8 17 8.8.17 [3.17.38.11] CARHPRYSYGKYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacccccgttacagctatgggaaatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2215 2214 M02948:180:000000000-JFBGH:1:1115:24525:14278_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD7-27*01 F 1 8 8 8 8.8.8 [3.17.38.11] CARGFGGDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagggtttgggggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccacctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2216 2215 M02948:180:000000000-JFBGH:1:1115:11214:14480_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [2.17.38.11] CAQDGGSGSGGYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcccaagatggcggttcggggagtggggggtacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2217 2216 M02948:180:000000000-JFBGH:1:1115:19060:14725_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*01 F 2 8 8 16 8.8.16 [2.17.38.11] CAEPTTCGSTSCYAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggaaccaacgacttgtggtagtaccagctgctatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2218 2217 M02948:180:000000000-JFBGH:1:1115:25591:15006_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-18*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARVVYSYGYYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtagtatacagctatggttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2219 2218 M02948:180:000000000-JFBGH:1:1115:12077:15629_1:N unproductive (see comment) Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 962 92.38 206/223 nt Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CVRAGGSNNGPGNW in-frame + rearranged sequence, stop codons other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcaataagtactggatgcactgggtccgccaagctccagggaaggggctggaatgggtctcacgtataagtcctgatgggagtggcacaaactacgcggactccgtaaagggccgattcaccgtctccagagacaacgccaagaacacactgtatctgcaaatgaacagtctgagagcctaggacacggctgtatattcctgtgtaagagccggtgggagcaacaacggcccggggaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2220 2219 M02948:180:000000000-JFBGH:1:1115:24573:15852_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-23*01 ORF 3 8 8 16 8.8.16 [3.17.38.11] CASQSTVVTPGEDYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagccagtctacggtggtaactccgggggaggactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2221 2220 M02948:180:000000000-JFBGH:1:1115:21725:15979_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-13*01 F 1 8 7 12 8.7.12 [3.17.38.11] CAREDSSSWYFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagaagatagcagcagctggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2222 2221 M02948:180:000000000-JFBGH:1:1115:14809:16052_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARDASGQQLDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggcttcagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagacgcgtccgggcagcagctagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2223 2222 M02948:180:000000000-JFBGH:1:1115:18967:16632_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD1-26*01 F 3 8 7 21 8.7.21 [3.17.38.11] CARVNGSYGTSRYYYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagttaatggcagctatggcaccagcagatattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2224 2223 M02948:180:000000000-JFBGH:1:1115:28165:18754_1:N productive Homsap IGHV1-8*01 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [2.17.38.11] CATDLSGWPPFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagatctcagtggctggccgccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2225 2224 M02948:180:000000000-JFBGH:1:1115:23179:19267_1:N productive Homsap IGHV4-59*12 (F) 1073 98.64 217/220 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARGRGDYGDYYRFDYW in-frame + other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaacttgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgaggtgactacggtgactactatcgctttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2226 2225 M02948:180:000000000-JFBGH:1:1115:9190:19922_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-10*01 F 3 8 7 11 8.7.11 [3.17.38.11] CARVDPGGNFDYW in-frame + tgtagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagtggatccgggcggaaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2227 2226 M02948:180:000000000-JFBGH:1:1115:8081:20418_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD2-2*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARHRVVPAYWYFDLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatcgtgtagtaccagcgtactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2228 2227 M02948:180:000000000-JFBGH:1:1115:20095:20551_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-2*01 F 3 8 7 16 8.7.16 [3.17.38.11] CARAHIVVVPAATGFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagcccatattgtagtagtaccagctgctacggggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2229 2228 M02948:180:000000000-JFBGH:1:1115:24564:20659_1:N productive Homsap IGHV3-30*03 F, or Homsap IGHV3-30*18 F or Homsap IGHV3-30-5*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD4-23*01 ORF 2 8 8 22 8.8.22 [3.17.38.11] CARDLWRDYGGNSGYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatttatggcgggactacggtggtaactccggctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2230 2229 M02948:180:000000000-JFBGH:1:1115:23428:21260_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-2*01 F 1 8 8 22 8.8.22 [3.17.38.11] CARVGRPYQLLHIGKTYYYGMDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagttggccgcccgtaccagctgctacatatagggaaaacctactactacggtatggacatctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2231 2230 M02948:180:000000000-JFBGH:1:1115:16275:21618_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD4-11*01 ORF 2 8 8 14 8.8.14 [3.17.38.11] CARFYSNYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagattctacagtaactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2232 2231 M02948:180:000000000-JFBGH:1:1115:22384:21956_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F (see comment) 220 83.87 52/62 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [3.17.38.11] CAKGWDIVVVPAHYYYMDVW in-frame + other possibilities: Homsap IGHJ6*04 and Homsap IGHJ6*01 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggttgggatattgtagtagtaccagctcactactactacatggacgtctggggcgaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2233 2232 M02948:180:000000000-JFBGH:1:1115:25304:21957_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARRSRDSSGWYDYW in-frame + gcatctggatataccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagacggagtcgtgatagcagtggctggtatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2234 2233 M02948:180:000000000-JFBGH:1:1114:23855:2652_1:N: unproductive (see comment) Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F or Homsap IGHV3-33*07 F 1007 94.62 211/223 nt Homsap IGHJ6*03 F (see comment) 245 91.38 53/58 nt Homsap IGHD6-13*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARGYYYYIDVW in-frame + rearranged sequence, stop codons other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) cgcagcgtctggattcaccttttgtagctatggtatgttctaggtccgccaggcaccaggtaaggggctggagtgggtggcagttatatggtatgatggaagtaataaacactatgcagactccgtgaagggccgattcaccacctccagtgacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaggggttactactactacatagacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2235 2234 M02948:180:000000000-JFBGH:1:1114:12961:3100_1:N: productive Homsap IGHV3-48*03 F 765 100.00 153/153 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-13*01 F 1 X 8 17 X.8.17 [X.5.38.11] CARLLYSRTYYYYYGMDVW in-frame + gagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagactactgtatagcagaacatactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 268 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2236 2235 M02948:180:000000000-JFBGH:1:1114:8947:3914_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD4-17*01 F 1 8 8 15 8.8.15 [2.17.38.11] CASLRLPYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtctacggctgccttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2237 2236 M02948:180:000000000-JFBGH:1:1114:23812:4047_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-21*02 F 2 8 8 16 8.8.16 [3.17.38.11] CAKDVSASSGDSDAFDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttctccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatgtgtctgcgagtagtggtgacagtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2238 2237 M02948:180:000000000-JFBGH:1:1114:12540:4340_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARGDSSGYYYEIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggggatagtagtggttattactacgaaatagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2239 2238 M02948:180:000000000-JFBGH:1:1114:19047:4976_1:N: productive Homsap IGHV1-8*01 F 978 94.06 206/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-12*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARGRVDYSGLDFCVLHYW in-frame + gcttctggatacaccttcaacagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaacccaaacaatggtgacaccgcctacgcacagaagttccagggcagactcaccatgaccagggacacctccacaaccacagcctacatggaactgagcagcctgagatctgaggacacggccgtctattactgtgcgagaggccgagtagattatagtggcctcgatttctgtgtacttcactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2240 2239 M02948:180:000000000-JFBGH:1:1114:23544:5111_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-10*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARDAGSYSFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctaaggagcctgagatctgacgacacggccgtgtattactgtgcgagagacgctgggagttactcttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2241 2240 M02948:180:000000000-JFBGH:1:1114:10409:5254_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKVSGSYYGYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtaagtgggagctactacggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2242 2241 M02948:180:000000000-JFBGH:1:1114:6335:5347_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-3*01 F 2 8 7 23 8.7.23 [3.17.38.11] CARGPPYDFWSGGIPNYYYYGMDVW in-frame + cgctgtctatggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggccccccctacgatttttggagtggcgggatcccgaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2243 2242 M02948:180:000000000-JFBGH:1:1114:20369:6601_1:N: productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-18*01 F 3 8 8 15 8.8.15 [2.17.38.11] CAREMGGYSYGPYFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcaaagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagatgggtggatacagctatggaccatactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2244 2243 M02948:180:000000000-JFBGH:1:1114:3982:7001_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 3 8 7 11 8.7.11 [3.17.38.11] CARDTGNYHNDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatactgggaactaccataatgactactggggccagggaaccctggtcgccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2245 2244 M02948:180:000000000-JFBGH:1:1114:20984:7103_1:N: unproductive (see comment) Homsap IGHV4-59*12 (F), or Homsap IGHV4-61*06 ORF 833 98.26 169/172 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 3 X 7 X X.7.X [X.12.38.11] CACG##VDYW out-of-frame + rearranged sequence, stop codons gcagcccccagggaagggactggagtggattgggtatatctattacagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcctgtggtagacgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 258 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2246 2245 M02948:180:000000000-JFBGH:1:1114:4469:7334_1:N:0 unproductive Homsap IGHV1-2*02 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 1 8 8 X 8.8.X [2.17.38.11] CARVGIA#GYW out-of-frame + gcttctggattcatcttcaccgactactctatacactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagtgacacgtccatcagcacagcctacatggagctgagcaggctgaaatctgacgacacggccgtatattactgtgcgagagtgggtatagcagtggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 340 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2247 2246 M02948:180:000000000-JFBGH:1:1114:10625:8372_1:N: productive Homsap IGHV1-18*01 F 1051 99.53 211/212 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-10*01 F 3 7 8 10 7.8.10 [X.17.38.11] CARVTSRYFDYW in-frame + gttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgtggagcctgagatctgacgacacggccgtgtattactgtgcgagagttacgtctcggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 306 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2248 2247 M02948:180:000000000-JFBGH:1:1114:23321:8742_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-17*01 F 2 8 7 19 8.7.19 [3.17.38.11] CARDGYGDYRGFRYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatggttacggtgactacagagggttcaggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2249 2248 M02948:180:000000000-JFBGH:1:1114:8743:9129_1:N:0 productive Homsap IGHV3-72*01 F 1091 97.38 223/229 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*01 F 3 8 10 9 8.10.9 [3.17.38.11] CARGFTLDDYW in-frame + tgtagcctctggattcaccttcagtgaccactacatggactgggtccgccaggctccagggaaggggctggagtgggttggccgtactagaaacaaagctaacagttacaccacagaatacgccgcgtctgtgaaagacagattcaccatctcaagagatgattcaaagagctcactgtatctgcaaatgaacagcctgagagccgaggacacggccatgtattactgtgcgagaggatttacccttgacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2250 2249 M02948:180:000000000-JFBGH:1:1114:3624:9353_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARARWNPYYYGDYYRFDYW in-frame + other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagcgcggtggaacccttattactacggtgactactatcgctttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2251 2250 M02948:180:000000000-JFBGH:1:1114:20816:9589_1:N: productive Homsap IGHV1-8*02 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARDFFGEVVPAAMRSLDYW in-frame + gcttctggatataccttcaccggctactatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattttttcggtgaggtagtaccagctgctatgcgttccctggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2252 2251 M02948:180:000000000-JFBGH:1:1114:5034:10693_1:N: productive Homsap IGHV1-8*01 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 8 23 8.8.23 [2.17.38.11] CARASSCIPYSSGWYGGLGWCFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagaggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggctgtttattactgtgcgagagcctcatcttgtattccctatagcagtggctggtacgggggcttggggtggtgctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2253 2252 M02948:180:000000000-JFBGH:1:1114:23176:10859_1:N productive Homsap IGHV1-18*04 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-14*01 ORF 2 8 8 6 8.8.6 [2.17.38.11] CAKDPGYW in-frame + gcttctggttacacctttaccagctacggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaaggaccctggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 332 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2254 2253 M02948:180:000000000-JFBGH:1:1114:9262:11952_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1020 95.50 212/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAREGYCSGGTCYSNFDYW in-frame + aagggttctggttacagttttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggctggggatcatctatcctagtgactctgaaaccagatacagcccgtccttccaaggccaggtctacatctcagtcgacaagtccatcagcaccgcctacctgcagtggagcagcctgagggcctcggacaccgccatgtattactgtgcgagggaaggctattgtagtggtggtacctgctactctaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2255 2254 M02948:180:000000000-JFBGH:1:1114:2838:12028_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1116 99.56 224/225 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD1-1*01 F 2 8 7 16 8.7.16 [5.17.38.11] CARAGLERVGWIDAFDIW in-frame + acctgcactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattggatatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagccggactcgaacgtgtcgggtggatcgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtacatccgccccaacccttttccccc 0 0 337 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2256 2255 M02948:180:000000000-JFBGH:1:1114:2090:12344_1:N: productive Homsap IGHV3-9*01 F 944 91.48 204/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-12*01 F 1 8 8 16 8.8.16 [3.17.38.11] CAKGMELRAYYYYGMDVW in-frame + tgcagcctctggattcaccctcagaggctactggatgctctgggtccgccaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaaaggtatggaactacgggcttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2257 2256 M02948:180:000000000-JFBGH:1:1114:28233:12427_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-3*01 F 3 8 8 21 8.8.21 [3.17.38.11] CARHVTFGVVIPPYDYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtgacttttggagtggttatccccccctatgactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2258 2257 M02948:180:000000000-JFBGH:1:1114:4379:12916_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F (see comment) 175 75.81 47/62 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARALTIDPRMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggaggcatcttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagctctgaccattgatcctcgtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2259 2258 M02948:180:000000000-JFBGH:1:1114:18164:13936_1:N productive Homsap IGHV3-48*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARGSDSSGYYGYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccctatattactgtgcgagaggatccgatagtagtggttattacggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2260 2259 M02948:180:000000000-JFBGH:1:1114:6555:14498_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1020 95.50 212/222 nt Homsap IGHJ4*02 F 167 84.78 39/46 nt Homsap IGHD6-19*01 F 2 8 8 6 8.8.6 [3.17.38.11] CVRGAGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgatgccagatatagcccgtccttccaaggccaggtcaccatatcagtcgacaactccctgtccaccgcctacctgcagtggaccagcctgaaggcctcggacaccgccatgtattactgtgtgagaggggctggatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2261 2260 M02948:180:000000000-JFBGH:1:1114:17560:14881_1:N unproductive (see comment) Homsap IGHV3-30*07 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + rearranged sequence, stop codons tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggctgattcaccatctccagagacaacgccaagaactcagtgtatctgcaaatgaacagcctgagagccgaggacacggccgtataatactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2262 2261 M02948:180:000000000-JFBGH:1:1114:14654:14907_1:N productive Homsap IGHV3-20*01 F, or Homsap IGHV3-20*02 ORF 1115 100.00 223/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARGSYGDYSHWFDPW in-frame + tgcagcctctggattcacctttgatgattatggcatgagctgggtccgccaagctccagggaaggggctggagtgggtctctggtattaattggaatggtggtagcacaggttatgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagccgaggacacggccttgtatcactgtgcgagaggatcttacggtgactactcccactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccaccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2263 2262 M02948:180:000000000-JFBGH:1:1114:4530:14932_1:N: No rearrangement found Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1005 95.43 209/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagagctgatccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 282 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2264 2263 M02948:180:000000000-JFBGH:1:1114:18428:15339_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD5-18*01 F 1 8 8 21 8.8.21 [2.17.38.11] CARDRGNVDTAMADYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgggggaacgtggatacagctatggccgactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2265 2264 M02948:180:000000000-JFBGH:1:1114:28369:15531_1:N productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1141 99.57 229/230 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 10 9 14 10.9.14 [2.17.38.11] CAREPCSGGSCWFDPW in-frame + ccatctccggggacagtgtctctagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2266 2265 M02948:180:000000000-JFBGH:1:1114:25465:15694_1:N productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [3.17.38.11] CASLYSSGWYISPLDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagtctgtatagcagtggctggtacatctctcccttggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2267 2266 M02948:180:000000000-JFBGH:1:1114:3927:15881_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CGKDRGGSLKGYFDLW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccttgtattactgtggaaaagatagaggtgggagcctcaagggatacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2268 2267 M02948:180:000000000-JFBGH:1:1114:17597:16028_1:N productive Homsap IGHV3-23*03 F (see comment) 992 94.55 208/220 nt Homsap IGHJ6*03 F 223 94.00 47/50 nt 8 7 8 8.7.8 [3.17.38.11] CARGNYMDVW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (7 AA in M02948:180:000000000-JFBGH:1:1114:17597:16028_1:N; 8 AA in Homsap IGHV3-23*03): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggactcacctttagcagctatgccatgacctgggtccgccaggctccagggaaggggctggagtgggtctcaattatttatagcggtggtaacacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaaaaacacgctgtctcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagggaactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2269 2268 M02948:180:000000000-JFBGH:1:1114:10768:16481_1:N No rearrangement found Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1014 95.89 210/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcatctggatacaccttcaccagctactatatgcactgggtgcgacagacccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaataatggtggtagctgcctcgtctcctgtgagaattcccctcgcgatat 0 0 271 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2270 2269 M02948:180:000000000-JFBGH:1:1114:22453:17178_1:N productive Homsap IGHV3-48*03 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-6*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDLSSSSPVFDYW in-frame + tgcagcctctggattcactttcagtccttatggtatgacctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagggatcttagcagctcgtccccagtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2271 2270 M02948:180:000000000-JFBGH:1:1114:14459:17457_1:N productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [2.17.38.11] CATVYDSSGYFHDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagtctatgatagtagtggttatttccatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2272 2271 M02948:180:000000000-JFBGH:1:1114:20298:18395_1:N unproductive (see comment) Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-2*01 F 3 8 8 X 8.8.X [2.17.38.11] CARDEGDCSSTR#YYFDYW out-of-frame + rearranged sequence, stop codons gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgagagatgagggggattgtagtagtaccagggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2273 2272 M02948:180:000000000-JFBGH:1:1114:14254:21389_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-21*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARRWRNDAFDIW in-frame + aagggttctggatacacctttaccacctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgacaccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggtggagaaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2274 2273 M02948:180:000000000-JFBGH:1:1114:8971:21690_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD4-23*01 ORF 3 8 8 12 8.8.12 [2.17.38.11] CARGDPRGGYFDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtgatggtagcacaaactacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctcagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggggaccctcgcgggggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2275 2274 M02948:180:000000000-JFBGH:1:1114:14114:22323_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-12*01 F 1 8 8 11 8.8.11 [2.17.38.11] CARGLVATPIDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcctagtggccacaccaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2276 2275 M02948:180:000000000-JFBGH:1:1114:17070:23705_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-16*02 F 2 8 8 25 8.8.25 [2.17.38.11] CAREGDGRMDYVWGSYRSYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgatattagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagggggacggacggatggattacgtttgggggagttatcgttcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2277 2276 M02948:180:000000000-JFBGH:1:1114:15317:25003_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARVAPPEYGPPDYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtggccccaccagaatatggtcccccggactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2278 2277 M02948:180:000000000-JFBGH:1:1113:13686:3449_1:N: No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtggtagtggtgattacacattcaacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccatgtattactgtgcgaaagggactcaaccccctcgtctcctgtgagaattcccctcgcgatat 0 0 274 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2279 2278 M02948:180:000000000-JFBGH:1:1113:19023:3726_1:N: productive Homsap IGHV1-8*02 F 996 94.98 208/219 nt Homsap IGHJ5*02 F 174 82.35 42/51 nt Homsap IGHD5-18*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARGIQLWLRTDRYNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctagcagttttaacacagtctatgcacagaacttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggatacagctatggttacggactgacaggtacaactggttcgacccctggggccagggaaccctggtccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2280 2279 M02948:180:000000000-JFBGH:1:1113:19420:4428_1:N: unproductive (see comment) Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1055 97.73 215/220 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD6-19*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARSSGWQTNTQYMDV* in-frame + rearranged sequence, stop codons; TRP 118 not identified other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaagcagttctcactgaagctgacctctgtgaccgccgcggacacggctgtgtattactgtgcgaggagcagtggctggcagacaaacacccaatacatggacgtctagggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2281 2280 M02948:180:000000000-JFBGH:1:1113:7048:5178_1:N:0 No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1046 97.27 214/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccatcagtaattactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtacctcgataagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 284 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2282 2281 M02948:180:000000000-JFBGH:1:1113:22065:5194_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD5-12*01 F 1 8 8 19 8.8.19 [2.17.38.11] CATGQVATRVLQTYYYYMDVW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagggcaagtggctacaagggtccttcagacatactactactacatggacgtctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2283 2282 M02948:180:000000000-JFBGH:1:1113:15503:5811_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 198 93.33 42/45 nt 8 7 6 8.7.6 [3.17.38.11] CARGIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2284 2283 M02948:180:000000000-JFBGH:1:1113:26637:6518_1:N: productive Homsap IGHV3-48*03 F 1211 99.59 243/244 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD4-17*01 F 2 8 8 20 8.8.20 [10.17.38.11] CARDGGIDGDYDFRYYYGMDVW in-frame + ggggtccctgagactctcctgtgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatggtggtattgacggtgactacgatttcaggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2285 2284 M02948:180:000000000-JFBGH:1:1113:16919:8413_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-15*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARQTHSFGGSHYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaaacacatagttttggtggtagccactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2286 2285 M02948:180:000000000-JFBGH:1:1113:12324:9670_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARSTYDSSGYYYVYYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccttcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaggtccacatatgatagtagtggttattactacgtgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2287 2286 M02948:180:000000000-JFBGH:1:1113:28117:10988_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD5-24*01 ORF 2 8 8 13 8.8.13 [2.17.38.11] CARLRLHSNNWFDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacttcggctacattctaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2288 2287 M02948:180:000000000-JFBGH:1:1113:23020:11057_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-12*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARVPMLGYDYYFDYW in-frame + tgcagcctctggattcaccttcagtacctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcattcattagtagtactagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtccctatgcttggctacgactactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2289 2288 M02948:180:000000000-JFBGH:1:1113:7034:12246_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-2*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARTRCSSTSCWYYFDYW in-frame + ggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaacgcgttgtagtagtaccagctgctggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2290 2289 M02948:180:000000000-JFBGH:1:1113:2943:12357_1:N: productive Homsap IGHV1-2*02 F, or Homsap IGHV1-2*04 F 879 89.04 195/219 nt Homsap IGHJ5*02 F (see comment) 156 78.43 40/51 nt Homsap IGHD6-19*01 F 1 8 8 10 8.8.10 [2.17.38.11] CARGGSSGWGIW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcctctggatacaccttcagcgaccactatatgcactgggtgcggcgggcccctggacaaggccttgagtggatgggatggatctaccctaacactggtggcacaaagtttgcacgggcgtttcagggccgggtcaccatgaccacggacatgtccatcaccacagcctacctggaactgagtagactgggatctgacgacacggctgtgtattactgtgcgagaggcggtagcagtggctgggggatctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2291 2290 M02948:180:000000000-JFBGH:1:1113:7859:12834_1:N: productive Homsap IGHV1-24*01 F 1195 100.00 239/239 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-16*01 F 3 8 8 15 8.8.15 [8.17.38.11] CATAIGGSYYYYGMDVW in-frame + cagtgaaggtctcctgcaaggtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagcgattggaggctcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2292 2291 M02948:180:000000000-JFBGH:1:1113:16904:13976_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 3 8 7 18 8.7.18 [3.17.38.11] CARAVVSGSYYHYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagccgtcgttagtgggagctactaccactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2293 2292 M02948:180:000000000-JFBGH:1:1113:23939:14334_1:N productive Homsap IGHV3-7*03 F 1034 95.96 214/223 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARDLYDSSGNDIW in-frame + tgcagcctctggattcaactttggtcacttttggatgacctgggtccgccaggctccagggaagggcctggagtgggtggccaacataaagcatgatggaggtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagacctctatgatagtagtggtaatgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2294 2293 M02948:180:000000000-JFBGH:1:1113:12093:15018_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 192 86.27 44/51 nt Homsap IGHD2-2*01 F 1 8 8 9 8.8.9 [2.17.38.11] CARGYEVLDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggggtacgaggtgctagactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2295 2294 M02948:180:000000000-JFBGH:1:1113:16602:15090_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD2-15*01 F 3 8 7 15 8.7.15 [3.17.38.11] CARDWGTAAPRGALDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattggggtactgccgctccccggggtgctcttgatatctggggccgagggacaatggtcatcgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2296 2295 M02948:180:000000000-JFBGH:1:1113:16722:15358_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARDYGDYARGWFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagactacggtgactacgccagggggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2297 2296 M02948:180:000000000-JFBGH:1:1113:5742:17919_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-8*02 F 3 8 8 13 8.8.13 [2.17.38.11] CARVLEDEGGWFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtactggaggatgaggggggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctggagaattcccctcgcgatat 0 0 352 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2298 2297 M02948:180:000000000-JFBGH:1:1113:24214:18126_1:N unproductive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F (see comment) 1073 98.64 217/220 nt Homsap IGHJ3*02 F 151 78.00 39/50 nt Homsap IGHD1-20*01 F 3 8 7 X 8.7.X [3.17.38.11] ESL*LERRGLGT#IW out-of-frame + rearranged sequence, stop codons 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattacgaatccctataactggaacgacgtgggttggggaccgatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2299 2298 M02948:180:000000000-JFBGH:1:1113:2910:18613_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 220 90.57 48/53 nt Homsap IGHD2-21*02 F 3 8 8 15 8.8.15 [2.17.38.11] CARALGSVVVTRYFDLW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagccctagggagtgtggtggtgactaggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2300 2299 M02948:180:000000000-JFBGH:1:1113:6554:19408_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARHYYDSSGYLGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagcctacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtactactgtgcgagacattactatgatagtagtggttacctaggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2301 2300 M02948:180:000000000-JFBGH:1:1113:16547:21352_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-13*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARLGEGYSGSWDPFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgctcgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactaggggaggggtatagtgggagctgggacccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2302 2301 M02948:180:000000000-JFBGH:1:1113:12724:22298_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARDPEGRGYCSGGSCYALGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagatccagaagggaggggatattgtagtggtggtagctgctacgccttaggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2303 2302 M02948:180:000000000-JFBGH:1:1113:10127:22569_1:N productive (see comment) Homsap IGHV4-61*01 F, or Homsap IGHV4-61*08 F 1061 97.31 217/223 nt 96.86 216/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-16*02 F 2 9 7 15 9.7.15 [3.17.38.11] CARVGGSYRWGDAFDIW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 36 of V-REGION: 3 nucleotides (from position 32 in the user submitted sequence), (do not cause frameshift) cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatgtcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagttggtgggagctaccggtggggtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2304 2303 M02948:180:000000000-JFBGH:1:1112:10530:2410_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [2.17.38.11] CAREDGSYSGSFGAIDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggacggcagctattctgggagttttggggccattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2305 2304 M02948:180:000000000-JFBGH:1:1112:24060:2770_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1088 98.65 220/223 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-1*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARDSAGGGELEPNNWFDPW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatagtgccggggggggggaactggaacctaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2306 2305 M02948:180:000000000-JFBGH:1:1112:8492:3252_1:N:0 No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F (see comment) 530 70.85 158/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found low V-REGION identity (70.85%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtatattactgtgcgagtaacaattacgattttatcccgcgagaggtgtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 288 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2307 2306 M02948:180:000000000-JFBGH:1:1112:9395:4872_1:N:0 productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-13*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARDGSSWYVPGHW in-frame + gcttctggttacacctttcccagttatggtatcacctgggtgcgacaggcccctggacaaggacttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagttccagggcagagtctccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcaagagatggcagcagctggtacgtccctgggcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2308 2307 M02948:180:000000000-JFBGH:1:1112:22952:5557_1:N: productive Homsap IGHV1-18*01 F 987 94.52 207/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARGLGYCSSTSCLTDNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggcctaggatattgtagtagtaccagctgcttaacggacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2309 2308 M02948:180:000000000-JFBGH:1:1112:25540:6741_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-15*01 F 3 8 8 14 8.8.14 [2.17.38.11] CAVAAGTNYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcagtggcagctggtacgaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2310 2309 M02948:180:000000000-JFBGH:1:1112:10371:7253_1:N: productive Homsap IGHV1-69*19 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-15*01 F 3 8 8 23 8.8.23 [2.17.38.11] CAREDIVVVVAVLLSYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggatgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaagatattgtagtggtggtagctgtattattaagttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2311 2310 M02948:180:000000000-JFBGH:1:1112:4104:7275_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1046 97.27 214/220 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD6-25*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARDADYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatgcggactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2312 2311 M02948:180:000000000-JFBGH:1:1112:24821:7911_1:N: productive Homsap IGHV3-7*01 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CVASLSGWYNDGMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtctatcactgtgttgctagtctcagtggctggtacaacgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2313 2312 M02948:180:000000000-JFBGH:1:1112:12927:8211_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARKAGYCSSTSCLYGAFDYW in-frame + gcatctggatacaccttcaccagctactatgcgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaaggccggatattgtagtagtaccagctgcttatacggggcgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2314 2313 M02948:180:000000000-JFBGH:1:1112:19171:8950_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD5-24*01 ORF 1 8 7 19 8.7.19 [3.17.38.11] CARVKLEMATISKIAWYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactagagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagggtaaaactagagatggctacaattagcaagatcgcctggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2315 2314 M02948:180:000000000-JFBGH:1:1112:5140:9936_1:N:0 productive Homsap IGHV3-48*04 F 1097 99.10 221/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARDRIAAAGRYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatcggatagcagcagctggtaggtactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2316 2315 M02948:180:000000000-JFBGH:1:1112:20441:11267_1:N productive Homsap IGHV1-2*02 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-16*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARELVDLGPTTSKAHFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagttggtagacttagggccgacaaccagcaaggcccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2317 2316 M02948:180:000000000-JFBGH:1:1112:14137:11592_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-10*02 F 2 8 8 26 8.8.26 [3.17.38.11] CVRGSAERTYVRPGGSRKPNYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggaatgggtctcagctattagtggtagtggtggtagcacatggtacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgtcagggggtcggcggaacgcacctatgttcggcctgggggatcccggaagccgaactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccctcgcgatat 0 0 395 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2318 2317 M02948:180:000000000-JFBGH:1:1112:5180:12289_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARRDSSSLVDDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggatagcagctcgttggtggatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2319 2318 M02948:180:000000000-JFBGH:1:1112:20531:12319_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-21*01 F 2 8 7 7 8.7.7 [3.17.38.11] CARVDWNYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggctgtttattactgtgcgagagtagattggaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2320 2319 M02948:180:000000000-JFBGH:1:1112:24586:12584_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD7-27*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARQNGGAASAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggcaaaatgggggggcggcgagtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2321 2320 M02948:180:000000000-JFBGH:1:1112:19428:13482_1:N productive Homsap IGHV1-2*04 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-25*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARERAKHRGAFDIW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagaaagggccaagcaccggggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2322 2321 M02948:180:000000000-JFBGH:1:1112:19888:15770_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-2*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARHVAPDIVVVPSYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtcgccccggatattgtagtagtaccaagctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtccctgtgagaattcccctcgcgatat 0 0 376 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2323 2322 M02948:180:000000000-JFBGH:1:1112:12256:15778_1:N productive Homsap IGHV3-43D*04 F 1097 99.10 221/223 nt Homsap IGHJ4*03 F (see comment) 168 83.33 40/48 nt Homsap IGHD2-21*01 F 1 8 8 15 8.8.15 [3.17.38.11] CVKETMRTIMWGYMDVW in-frame + other possibilities: Homsap IGHJ6*03 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtctctcttattagttgggatggtggtaccacatactatgcagactctgtgaagggtcgattcaccatctccagagacaacagcaaaaactccctgtatgtgcaaatgaacagtctgagagctgaggacaccgccttgtattactgtgtaaaggagacgatgaggacaataatgtgggggtacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2324 2323 M02948:180:000000000-JFBGH:1:1112:19385:17853_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARVRGGSSFHLDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtatattactgtgcgagagtccgtggtggcagctcgtttcatcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2325 2324 M02948:180:000000000-JFBGH:1:1112:28361:17932_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-6*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARELGYSSFSGNYFDYW in-frame + tgcagcgtctggattcacctttagcagctatgccatgagctgggtccgccaggatccaggtaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagagcttgggtatagcagcttctccgggaactactttgactactggggccagggaaccctagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2326 2325 M02948:180:000000000-JFBGH:1:1112:7025:19305_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-3*01 F 3 8 8 19 8.8.19 [3.17.38.11] CAKDRGFTIFGVVLGDVIDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcggggttttacgatttttggagtggtgttgggtgatgtaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2327 2326 M02948:180:000000000-JFBGH:1:1112:15594:20053_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 844 90.64 184/203 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 1 4 8 13 4.8.13 [X.17.38.11] CAKAGGSSWYYFDYW in-frame + ctatgcggccagcccgctcagacgctcgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagctgggggcagcagctggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 306 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2328 2327 M02948:180:000000000-JFBGH:1:1112:24411:21123_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-21*02 F 2 8 7 19 8.7.19 [3.17.38.11] CARGAYCGGDCYPEDDAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggagcatattgtggtggtgactgctacccggaagatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2329 2328 M02948:180:000000000-JFBGH:1:1112:20522:21622_1:N productive Homsap IGHV3-48*04 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-13*01 F 2 8 8 12 8.8.12 [3.17.38.11] CACIAAAAENFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcctgcatagcagcagctgccgagaattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2330 2329 M02948:180:000000000-JFBGH:1:1112:8201:24465_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD4-17*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARHTTVTEYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggaccatctatcctgatgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatactacggtgactgaatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2331 2330 M02948:180:000000000-JFBGH:1:1111:19817:3293_1:N: productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1105 100.00 221/221 nt 99.55 220/221 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-26*01 F 2 8 8 14 8.8.14 [3.17.37.11] CASQWELPPYGAFDIW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 96 of V-REGION: 1 nucleotides (from position 196 in the user submitted sequence), (cause frameshift) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaagcctcggacaccgccatgtattactgtgcgagccagtgggagctgcccccttacggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 358 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2332 2331 M02948:180:000000000-JFBGH:1:1111:20743:4371_1:N: productive (see comment) Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1068 96.49 220/228 nt 96.05 219/228 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-9*01 F 2 8 10 12 8.10.12 [3.17.37.11] CSTGGVNWNYVGFW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 103 of V-REGION: 1 nucleotides (from position 224 in the user submitted sequence), (cause frameshift) tgcagcctctggattcactttcagtaacgcctggatgagttgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaaggaaaagtgatggtgagacaacagactacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcagaaaacatgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgggtatattgttccacagggggagtgaattggaattatgttggattctggggccagggaaccctggtcaccgtctccccagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2333 2332 M02948:180:000000000-JFBGH:1:1111:23550:5227_1:N: productive Homsap IGHV3-7*03 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-14*01 ORF 3 8 8 8 8.8.8 [3.17.38.11] CARYGNLGNW in-frame + tgtaggctctggattcacctttagtgactcttggatgagttgggcccgccaggctccagggagggggctggagtatgtggccaacataaaggaagatggaagtcagcaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactttatctgcaaatgaacagcctgagagccgaggacacggccgtgtattattgtgcgagatacggaaaccttggcaattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2334 2333 M02948:180:000000000-JFBGH:1:1111:7033:5356_1:N:0 productive Homsap IGHV1-2*02 F 1032 96.80 212/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD4-11*01 ORF 1 8 8 19 8.8.19 [2.17.38.11] CARSGGRQYRYRYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatctgggggacgacagtacaggtaccgctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2335 2334 M02948:180:000000000-JFBGH:1:1111:6956:5698_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-8*02 F 1 8 8 9 8.8.9 [3.17.38.11] CARSRDAFDIW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaaggtccagggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2336 2335 M02948:180:000000000-JFBGH:1:1111:20093:5769_1:N: productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1105 97.83 225/230 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 10 9 14 10.9.14 [2.17.38.11] CARGTYGHEAGLFDYW in-frame + ccatctccggggacagtgtctctagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatacagtatctgtgaaaagtcgaataaccgtcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgtggacgcggctgtatattactgtgcaagagggacctacggtcatgaggcagggctctttgattactggggccagggaaccctggtcaccgtctccgcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2337 2336 M02948:180:000000000-JFBGH:1:1111:21523:5917_1:N: productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1095 100.00 219/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-9*01 F 2 8 8 18 8.8.18 [2.17.38.11] CAAGLNYDILTGLWNWFDPW in-frame + gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggcaggacttaattacgatattttgactggcctgtggaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2338 2337 M02948:180:000000000-JFBGH:1:1111:18958:6000_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-9*01 F 2 8 8 18 8.8.18 [2.17.38.11] CAAGLNYDILTGLWNWFDPW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggcaggacttaattacgatattttgactggcctgtggaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2339 2338 M02948:180:000000000-JFBGH:1:1111:25133:9123_1:N: productive Homsap IGHV4-4*05 F 1047 96.85 215/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 9 7 13 9.7.13 [3.17.38.11] CARGSPRGGSYVNYW in-frame + cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtggacacgttcaagaaccaattctccctggagctgacctctgtgaccgccgcggacacggctgtgtattactgcgcgagaggtagccctcggggtgggagctacgttaactactggggccagggaaccctggtcaccatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2340 2339 M02948:180:000000000-JFBGH:1:1111:12247:9252_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1005 95.43 209/219 nt Homsap IGHJ3*02 F 151 78.00 39/50 nt Homsap IGHD7-27*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARTPHGGEVIW in-frame + gcatctggatacaccttcacgaactactatatgcactgggtgcgacaggcccctggacaagggcctgagtggatgggaataatcaacccgagtagcggtagtacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggacctgagcagcctcagatctgacgacacggccgtgtattactgtgcgagaactcctcacgggggagaggttatctggggccaaggaacaacggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2341 2340 M02948:180:000000000-JFBGH:1:1111:17697:9310_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD3-3*01 F 2 8 8 24 8.8.24 [2.17.38.11] CARASTYYDFWSGPNANVKKYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcaagtacgtattacgatttttggagtggtccaaacgccaacgtaaaaaaatactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2342 2341 M02948:180:000000000-JFBGH:1:1111:11084:9508_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARLSYDSSGYYSRLDGYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagactcagctatgatagtagtggttattactcacggctggacggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2343 2342 M02948:180:000000000-JFBGH:1:1111:5342:10306_1:N: productive Homsap IGHV3-64D*06 F 1115 100.00 223/223 nt Homsap IGHJ4*01 F, or Homsap IGHJ4*02 F (see comment) 150 79.17 38/48 nt Homsap IGHD4-23*01 ORF 2 8 8 13 8.8.13 [3.17.38.11] CVKRSLTVGYDGFYW in-frame + other possibilities: Homsap IGHJ2*01 (highest number of consecutive identical nucleotides) ttcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaagggactggaatatgtttcagctattagtagtaatgggggtagcacatactacgcagactccgtgaagggcagattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgagcagtctgagagctgaggacacggctgtgtattactgtgtgaaacgctcgcttacggttggctacgatggtttctactggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2344 2343 M02948:180:000000000-JFBGH:1:1111:22019:10562_1:N productive Homsap IGHV1-8*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-11*01 ORF 2 8 8 12 8.8.12 [2.17.38.11] CARGLDYSNYVDYW in-frame + gcttctggatacaccttcaccacttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacactggtaacacaggctatgcacagaaattccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccttgactacagtaattatgtggactactggggccagggaaccctggtcaccgtctcctcagggattgaatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2345 2344 M02948:180:000000000-JFBGH:1:1111:9691:10881_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 987 94.52 207/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-21*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARSFFSLGLRSALGAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgaacagcctgagatctgaggacacggccatgtattactgtgcgagaagtttcttttccctcgggctccggagtgccctaggcgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2346 2345 M02948:180:000000000-JFBGH:1:1111:25425:11334_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*01 F 3 8 8 19 8.8.19 [3.17.38.11] CAKGGEPRGYIVVVPAAVDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggaggcgaaccgaggggatatattgtagtagtaccagctgctgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2347 2346 M02948:180:000000000-JFBGH:1:1111:3339:11435_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD6-13*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARVGDLGISVVVPAHW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagttggcgatttgggcatttctgtagtagtaccagcccactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2348 2347 M02948:180:000000000-JFBGH:1:1111:22150:12254_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F (see comment) 197 80.33 49/61 nt Homsap IGHD4-23*01 ORF 2 8 8 12 8.8.12 [3.17.38.11] CARQPPNYYGMDVW in-frame + other possibilities: Homsap IGHJ6*01 and Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaaccaccaaattactatggtatggatgtctggggccaggggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2349 2348 M02948:180:000000000-JFBGH:1:1111:17054:12345_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARSTYDSSGPPQNYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagatctacctatgatagtagtggccccccccaaaactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2350 2349 M02948:180:000000000-JFBGH:1:1111:11541:13170_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*01 F (see comment) 124 72.00 36/50 nt Homsap IGHD3-10*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARDGMVRGVRPPVW in-frame + other possibilities: Homsap IGHJ4*03 and Homsap IGHJ4*01 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagacgggatggttcggggagttcgccctcccgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2351 2350 M02948:180:000000000-JFBGH:1:1111:19755:13391_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-23*01 ORF 2 8 8 19 8.8.19 [2.17.38.11] CATERVQRRGNSAELYYFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagagagagttcaacggcgtggtaactccgccgagttgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2352 2351 M02948:180:000000000-JFBGH:1:1111:23062:14783_1:N productive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1072 99.08 216/218 nt 98.62 215/218 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 2 8 8 24 8.8.24 [2.16.38.11] CASAPLEDRYCSSTSCNYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 45 of V-REGION: 1 nucleotides (from position 51 in the user submitted sequence), (cause frameshift) gcttctggaggcacctttagcagctatgctatcagctgggtgcgacaggccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcactgaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtgcccccttggaggaccgatattgtagtagtaccagctgcaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 385 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2353 2352 M02948:180:000000000-JFBGH:1:1111:28093:14981_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARPILAAAGTTAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggcctatattagcagcagctggtactacggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2354 2353 M02948:180:000000000-JFBGH:1:1111:14156:15586_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD4-17*01 F 2 8 8 17 8.8.17 [2.17.38.11] CAKEWGYGDYDMTYYMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgaaagagtgggggtacggtgactacgatatgacctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2355 2354 M02948:180:000000000-JFBGH:1:1111:15719:15763_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 1 8 7 11 8.7.11 [3.17.38.11] CARGTAPDPFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggtacagctcccgacccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2356 2355 M02948:180:000000000-JFBGH:1:1111:13787:18125_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*01 F 2 8 8 10 8.8.10 [3.17.38.11] CANPTSYAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaccctacgagctatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2357 2356 M02948:180:000000000-JFBGH:1:1111:15918:18874_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD7-27*01 F 2 8 8 11 8.8.11 [3.17.38.11] CAKELGISAFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagaactggggataagcgcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2358 2357 M02948:180:000000000-JFBGH:1:1111:16302:19160_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD7-27*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARDPNWGPDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatccaaactggggacccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2359 2358 M02948:180:000000000-JFBGH:1:1111:19387:20582_1:N productive Homsap IGHV1-18*01 F 996 94.98 208/219 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARSCSSTSCGYYYYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaagtatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgagaagttgtagtagtaccagctgcggttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2360 2359 M02948:180:000000000-JFBGH:1:1111:26031:21271_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F or Homsap IGHV3-33*07 F or Homsap IGHV3-33*08 F 831 96.61 171/177 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*01 F 3 X 8 11 X.8.11 [X.13.38.11] CAREAPAASIGYW in-frame + cgccaggctccaggcaaggggatggagtgggtggcagtcatatggtacgatggaagtaataaatactatgcagactccgcgaagggccgattcaccatctccagagacaattccaagaacacactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaagcaccagctgctagtattggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 274 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2361 2360 M02948:180:000000000-JFBGH:1:1111:8231:21635_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F (see comment) 184 77.42 48/62 nt Homsap IGHD2-2*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARQYQLLPGGNMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcgtgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacagtaccagctgctcccgggcggcaacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2362 2361 M02948:180:000000000-JFBGH:1:1111:7405:21771_1:N: productive Homsap IGHV1-2*02 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-10*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARYYGSGSYYPLRRYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgaggtactatggttcggggagttattaccccctacggcgctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2363 2362 M02948:180:000000000-JFBGH:1:1110:23024:2614_1:N: No rearrangement found Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1032 96.80 212/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggttacacctttaccagctatggtatcaactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagctgatccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 282 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2364 2363 M02948:180:000000000-JFBGH:1:1110:12622:4220_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARGRRYYYYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactcctggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgtcgttattactactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2365 2364 M02948:180:000000000-JFBGH:1:1110:22450:4653_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*02 F 2 8 8 16 8.8.16 [2.17.38.11] CARSRCGSTSCYTFFDYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgaggtcgcgttgtggtagtaccagctgctataccttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2366 2365 M02948:180:000000000-JFBGH:1:1110:17053:4695_1:N: productive Homsap IGHV3-11*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-13*01 F 3 8 8 11 8.8.11 [3.17.38.11] CATEQQLVDFDYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgacagaacagcagctggtggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2367 2366 M02948:180:000000000-JFBGH:1:1110:23747:4782_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1064 98.18 216/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARVGEGAFDYW in-frame + cactgtctctggtggctccatcagtagttattactggagctggatccggcagcccccagggaagggactggagtggattgggtatatccataacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatattagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtaggtgagggagcgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2368 2367 M02948:180:000000000-JFBGH:1:1110:22977:5023_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-26*01 F 1 10 7 13 10.7.13 [3.17.38.11] CARTGSVGAHAFDIW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaacgggatcggtgggagcccatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2369 2368 M02948:180:000000000-JFBGH:1:1110:13479:5569_1:N: productive Homsap IGHV3-21*04 F 1106 99.55 222/223 nt Homsap IGHJ1*01 F 242 96.15 50/52 nt Homsap IGHD3-10*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARVRAATSEYFQHW in-frame + tgcagcccctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagttcgggctgctactagtgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2370 2369 M02948:180:000000000-JFBGH:1:1110:18295:6385_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-21*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARLRDLAVHYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagattacgcgaccttgcggttcactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2371 2370 M02948:180:000000000-JFBGH:1:1110:18494:6645_1:N: productive Homsap IGHV1-18*01 F 1059 98.17 215/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-2*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARGGKGGDVVVPAAIYVPVNW in-frame + gcttctgtttacacctttaccagctattgtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcatgagatctgaagacacggccgtgtattactgtgcgagaggggggaaagggggagatgtagtagtaccagctgctatttatgttcccgtaaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2372 2371 M02948:180:000000000-JFBGH:1:1110:19633:7651_1:N: productive Homsap IGHV4-39*01 F, or Homsap IGHV4-39*05 F or Homsap IGHV4-39*08 (F) 1112 99.12 224/226 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-24*01 ORF 1 10 7 14 10.7.14 [3.17.38.11] CASPGMATKFDTFDIW in-frame + cactgtctctggtgtctccatcagcagtagtatttactactggggctggatccgccagcccccagggaaggggctggagtggattgggagtatctattatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggctgtgtattactgtgcgagcccggggatggctacaaaattcgatacttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2373 2372 M02948:180:000000000-JFBGH:1:1110:7541:8703_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ2*01 F 211 88.68 47/53 nt Homsap IGHD7-27*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARVTGDRAYFDLW in-frame + tgcagcctctggatccaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacagctccaagaacacactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagtaactggggatcgggcgtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2374 2373 M02948:180:000000000-JFBGH:1:1110:14340:8751_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ3*01 F (see comment) 169 82.00 41/50 nt Homsap IGHD6-6*01 F 2 8 7 13 8.7.13 [3.17.38.11] CAKDGGAAARPLDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgaaagatgggggtgcggcagctcgtcctttggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2375 2374 M02948:180:000000000-JFBGH:1:1110:21360:8867_1:N: unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 996 94.98 208/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD6-13*01 F 2 8 8 18 8.8.18 [2.17.38.11] CAREGIAAAGTLTNNWFDPW in-frame + rearranged sequence, stop codons gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggataagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagggtatagcagcagctggtacactaaccaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2376 2375 M02948:180:000000000-JFBGH:1:1110:12938:8926_1:N: unproductive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*01 F 1 8 7 X 8.7.X [3.17.38.11] CASFGCSSTSRIP#DYW out-of-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagttttgggtgtagtagtaccagccgaatcccagggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2377 2376 M02948:180:000000000-JFBGH:1:1110:23816:9173_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDSVVFGSSRTFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagattccgtcgtttttggtagcagccggacctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2378 2377 M02948:180:000000000-JFBGH:1:1110:16451:9191_1:N: productive Homsap IGHV1-46*04 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARGTAVAGPFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttgcagggcagagtcaccatgaccagggacacgtccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcacggcagtggctggaccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2379 2378 M02948:180:000000000-JFBGH:1:1110:8336:9471_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARENSGSYLEIDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagagaatagtgggagctacttggaaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2380 2379 M02948:180:000000000-JFBGH:1:1110:9960:10945_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-12*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARHGRSGYSGYDVLSPDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgggcgttctggatatagtggctacgatgtcctatctcctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2381 2380 M02948:180:000000000-JFBGH:1:1110:2128:11259_1:N: productive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ5*02 F (see comment) 138 74.51 38/51 nt 8 8 10 8.8.10 [3.17.38.11] CAKGSLLWFGEL (see V-DOMAIN Functionality comment) in-frame + IMGT/JunctionAnalysis gives no results for this JUNCTION; TRP 118 not identified other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggtcattactatggttcggggagttaggtcagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2382 2381 M02948:180:000000000-JFBGH:1:1110:10597:11413_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-13*01 F 1 8 7 20 8.7.20 [3.17.38.11] CARTRLTDSSSWSYYYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaacacgccttacggatagcagcagctggtcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2383 2382 M02948:180:000000000-JFBGH:1:1110:3509:11552_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 183 84.31 43/51 nt Homsap IGHD2-15*01 F 3 8 8 15 8.8.15 [2.17.38.11] CASWSRVAAVSGAFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagttggtctcgggtcgctgcggtgagtggggctttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2384 2383 M02948:180:000000000-JFBGH:1:1110:7557:12893_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARVVVGGDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcctgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggtcgtagtggggggtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2385 2384 M02948:180:000000000-JFBGH:1:1110:22111:13062_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1028 96.36 212/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 1 8 7 12 8.7.12 [3.17.38.11] CASSRRSQWRVDYW in-frame + cactgtctctggtggctccatcagtagttactcctggagctggatccggcagcccccagggaagggactggagtggattgggtatatctttcacactgggaacaccaactacaacccctccctcaagagtcgagtcaccatatcaatagacacgtccaagaaccagttctccctgaagctgaactctgtgaccgctgcggacacggccgtgtattattgtgcgagtagccgacgatcacagtggagggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2386 2385 M02948:180:000000000-JFBGH:1:1110:2636:13561_1:N: productive (see comment) Homsap IGHV3-48*01 F 1055 97.73 215/220 nt 97.27 214/220 nt Homsap IGHJ5*02 F 183 84.31 43/51 nt Homsap IGHD5-12*01 F 1 8 7 14 8.7.14 [3.17.38.11] CARFETVAANGGLEAW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 57 of V-REGION: 3 nucleotides (from position 89 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtaccatatactacgcagactctgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtctattactgtgcgagatttgaaacagtggctgccaacggcggactcgaagcctggggccagggaaccctagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2387 2386 M02948:180:000000000-JFBGH:1:1110:2654:14592_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-22*01 F 2 8 7 19 8.7.19 [3.17.38.11] CASINSDSSGYYYAGYAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagcatcaactccgatagtagtggttattactacgcggggtatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2388 2387 M02948:180:000000000-JFBGH:1:1110:21264:15407_1:N productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1123 98.70 227/230 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-22*01 F 2 10 9 16 10.9.16 [2.17.38.11] CAREIFDSGGYSCCMDVW in-frame + other possibilities: Homsap IGHJ6*04 and Homsap IGHJ6*01 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) ccatctccggggacagtgtctctagcaacagtgctgcttggagctggatcaggcagtccccatcgagaggccttgaatggctgggaaggacatactacaggtccaagtggtataataattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagagagatctttgatagtggtggttactcgtgctgcatggacgtctggggcgaaggggccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 373 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2389 2388 M02948:180:000000000-JFBGH:1:1110:8835:15410_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-21*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARLEQDVVVIAKPIDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttatacgaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttgagcaagatgtggtggtgattgctaaaccgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2390 2389 M02948:180:000000000-JFBGH:1:1110:3398:15493_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 672 89.70 148/165 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-21*02 F 2 X 8 14 X.8.14 [X.9.38.11] CAKGGGYNGPSYFDYW in-frame + ctatgcgccttgccagcccgctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaggggggtggctacaatggaccgagctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 271 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2391 2390 M02948:180:000000000-JFBGH:1:1110:12275:16131_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD4-23*01 ORF 2 8 7 8 8.7.8 [3.17.38.11] CARGDGGDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcgacggcggcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2392 2391 M02948:180:000000000-JFBGH:1:1110:26472:16501_1:N productive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1100 100.00 220/220 nt 99.55 219/220 nt Homsap IGHJ5*02 F 156 78.43 40/51 nt Homsap IGHD6-13*01 F 1 8 7 9 8.7.9 [3.17.38.11] CARGDSSRWSW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 57 of V-REGION: 3 nucleotides (from position 89 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggggacagcagcagatggagctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2393 2392 M02948:180:000000000-JFBGH:1:1110:10900:16857_1:N No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F (see comment) 530 70.85 158/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found low V-REGION identity (70.85%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtatattactgtgcgagtaacaattacgattttatcccgcgagaggtgtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 288 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2394 2393 M02948:180:000000000-JFBGH:1:1110:28472:16950_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKRSSSGYGYYYMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaggagtagtagtggctatggttactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2395 2394 M02948:180:000000000-JFBGH:1:1110:14595:17118_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-10*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKSYGSGNYRYFDYW in-frame + tgcagcctctggattcacctttagcacctatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcaggtattaggggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccacctccagagacaattccaaaaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgaaaagctatggttcggggaattaccgttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2396 2395 M02948:180:000000000-JFBGH:1:1110:21477:17127_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARDPYYYDSSGYYNW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagacccgtattactatgatagtagtggttattataactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2397 2396 M02948:180:000000000-JFBGH:1:1110:9884:17170_1:N: productive Homsap IGHV3-30-3*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD4-11*01 ORF 2 8 8 12 8.8.12 [3.17.38.11] CATDVAFSMSNDKW in-frame + tgcagcctctggattcaccttcagtacctatgctatgtactgggtccgccaggctccaggcaaggggctggagtgggtggcacttatatcatatgatggaaacaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattattgtgcgacagatgtggccttcagtatgtcaaatgacaagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2398 2397 M02948:180:000000000-JFBGH:1:1110:19463:17586_1:N No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 279 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2399 2398 M02948:180:000000000-JFBGH:1:1110:20419:18885_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-10*01 F 1 8 8 18 8.8.18 [3.17.38.11] CAKDAHPGLLWFGERDFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatgcccacccggggttactatggttcggggagcgggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2400 2399 M02948:180:000000000-JFBGH:1:1110:27375:20067_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcggctattagtggtagtggtggtaccacacactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2401 2400 M02948:180:000000000-JFBGH:1:1110:18209:20426_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 3 8 8 23 8.8.23 [3.17.38.11] CAKGGTPIVVAPAAITADYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgatgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggaggtacgcctattgtagtagcaccagctgctatcaccgcggactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2402 2401 M02948:180:000000000-JFBGH:1:1110:20388:20869_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [2.17.38.11] CATGRDSSGYYFLLFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaggaagggatagtagtggttattacttcctcctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2403 2402 M02948:180:000000000-JFBGH:1:1110:15023:21513_1:N productive Homsap IGHV3-11*04 F, or Homsap IGHV3-48*03 F or Homsap IGHV3-48*04 F 721 93.29 153/164 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 3 X 8 12 X.8.12 [X.8.38.11] CARFIQGVAATDYW in-frame + ggaaggggctggagtgggtttcatacattagtagtggcggtagtaccatatactacgcggactccgtgaagggccgatttaccatctccagagacaacgccaagaacacgctgtttctgcaaatgaacagtctgagagccgaggacacggctgtgtattattgtgcgagatttattcagggggtagctgccactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 264 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2404 2403 M02948:180:000000000-JFBGH:1:1110:23431:21697_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARGYDDSSGYPYDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggctacgatgatagtagtggttacccttatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2405 2404 M02948:180:000000000-JFBGH:1:1110:7662:22256_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 7 17 8.7.17 [3.17.38.11] CAWTYCSSTSCYYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgcgcctggacctattgtagtagtaccagctgctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2406 2405 M02948:180:000000000-JFBGH:1:1110:13549:22730_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F (see comment) 161 78.85 41/52 nt Homsap IGHD4-17*01 F 2 8 8 11 8.8.11 [2.17.38.11] CASRGYGDNASAW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagccgggggtacggtgacaacgcgtcggcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2407 2406 M02948:180:000000000-JFBGH:1:1110:12576:23281_1:N productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARDRAVAGDYW in-frame + tgcagcctctggattcaccttcagtagctcctggatgcactgggtccgccaagctccagggcaggggctggtgtgggtctcacatattaattatgatggcagtaccacaaggtacgcggactccgtgaagggccgattcaccatctccagggacaacgccaagaacacactgtatctgcaaatgaacagtctgagagtcgaggacacggctgtgtattactgtgcgagagatcgagcagtggctggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2408 2407 M02948:180:000000000-JFBGH:1:1110:11354:23839_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARDSLGYCSSTSCSNGDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattccctaggatattgtagtagtaccagctgctccaacggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2409 2408 M02948:180:000000000-JFBGH:1:1110:18911:24045_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-14*01 ORF 3 8 8 16 8.8.16 [3.17.38.11] CARGQERGFTLNINFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggacaggagagggggtttaccctgaacataaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2410 2409 M02948:180:000000000-JFBGH:1:1109:22461:2609_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F or Homsap IGHV3-33*08 F 1050 97.72 214/219 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD5-24*01 ORF 3 8 8 12 8.8.12 [2.17.38.11] CAKGDGYYWYFDLW in-frame + gcttctggaggcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggagatggatactactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2411 2410 M02948:180:000000000-JFBGH:1:1109:17172:2766_1:N: productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARDRWSGRYLDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggctgtgtattactgtgcgagagatagatggagtggaaggtatcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2412 2411 M02948:180:000000000-JFBGH:1:1109:17831:3125_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-10*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARDPGLRFGEKNAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatccgggtttgaggttcggggagaaaaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2413 2412 M02948:180:000000000-JFBGH:1:1109:10888:3520_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARGLVGAKQGGYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcctagtgggagctaagcagggtggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2414 2413 M02948:180:000000000-JFBGH:1:1109:23934:3558_1:N: productive Homsap IGHV1-2*02 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 1 8 8 10 8.8.10 [2.17.38.11] CARDHSKVADYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagggtcaccatgaccagggacacgtccaccagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaagagatcatagcaaggtcgccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2415 2414 M02948:180:000000000-JFBGH:1:1109:8877:3876_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-14*01 ORF 1 8 8 14 8.8.14 [2.17.38.11] CARDSLVTGHNWFDPW in-frame + acttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattctctagtaaccggacacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2416 2415 M02948:180:000000000-JFBGH:1:1109:6206:4352_1:N:0 productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 1 8 8 11 8.8.11 [2.17.38.11] CATRLGAGAFDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaaggttgggagccggggcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2417 2416 M02948:180:000000000-JFBGH:1:1109:23158:5522_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-21*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDPGGGYSYNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatccgggtggaggttattcgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2418 2417 M02948:180:000000000-JFBGH:1:1109:4068:5923_1:N:0 productive Homsap IGHV3-7*03 F 1061 97.31 217/223 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD6-6*01 F 1 8 8 17 8.8.17 [3.17.38.11] CARAKNSGSYYYYYYMDVW in-frame + tgcagcctctggattcacctttagtagcaattggatgacctgggtccgccaggctccaaggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaacactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacaccctgagggccgaggacacggccgtgtattactgtgcgagagcaaagaacagtggctcatactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2419 2418 M02948:180:000000000-JFBGH:1:1109:27715:6711_1:N: unproductive Homsap IGHV3-7*02 F, or Homsap IGHV3-7*04 (F) 1052 96.86 216/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 8 X 8.8.X [3.17.38.11] CARAAGVV#DYW out-of-frame + tgcagcctctggattcacctttagtagttattggatgagctgggtccgccaggctccagggaaagggctggagtgggtggccaatataaggcaagatggaggtgagaaaaagtatgtggactctgtgaagggccgattcaccatctccagagacagcgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagcggcgggggtggtacgactactggggccagggaagcctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 346 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2420 2419 M02948:180:000000000-JFBGH:1:1109:4056:8846_1:N:0 productive Homsap IGHV1-2*02 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARGYDFWSVDDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggttacgatttttggagtgtcgatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2421 2420 M02948:180:000000000-JFBGH:1:1109:18155:9609_1:N: unproductive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-3*01 F 2 8 8 22 8.8.22 [3.17.38.11] CATPGGGSYDFWSGYSSLYGMDVW in-frame + rearranged sequence, stop codons tgcagcctctggattcacctttagcagctatgccatgagctaggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagatctgaggacacggccgtgtattactgtgcaacacccggaggcggtagctacgatttttggagtggttattcatccctttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2422 2421 M02948:180:000000000-JFBGH:1:1109:21657:9888_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD3-3*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARVKGFLEWLMPKYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtgaagggatttttggagtggttaatgcctaaatactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2423 2422 M02948:180:000000000-JFBGH:1:1109:13849:9981_1:N: productive Homsap IGHV3-64*02 F, or Homsap IGHV3-64*07 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*01 F 3 8 8 11 8.8.11 [3.17.38.11] CAREGDGGVTDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaagggactggagtatgtttcagctattagtagtaatgggggtagcacatattatgcagactctgtgaagggcagattcagcatctccagagacaattccaagaacacgctgtatcttcaaatgggcagcctgagagctgaggacatggctgtgtattactgtgcgagagagggggacgggggagtaactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2424 2423 M02948:180:000000000-JFBGH:1:1109:10410:10844_1:N productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ5*02 F 174 82.35 42/51 nt Homsap IGHD3-10*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARVGDIVVLDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtcggggatattgtagtactcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2425 2424 M02948:180:000000000-JFBGH:1:1109:2096:12872_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-16*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARLLGGVVGDFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcttagggggagtagtgggcgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2426 2425 M02948:180:000000000-JFBGH:1:1109:16355:13043_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-21*02 F 3 8 8 11 8.8.11 [3.17.38.11] CARDLGTGHFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggtcgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatctggggactggccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2427 2426 M02948:180:000000000-JFBGH:1:1109:24896:13208_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ1*01 F 206 88.46 46/52 nt Homsap IGHD1-26*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARLVGATRRYFQHW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagattggtcggagctacgaggcggtacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2428 2427 M02948:180:000000000-JFBGH:1:1109:1741:13240_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-21*02 F 2 8 8 19 8.8.19 [3.17.38.11] CAKGLRGAAYCGGDCYSLDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactggatccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaaaggtttaagaggcgcggcatattgtggtggtgactgctattcccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2429 2428 M02948:180:000000000-JFBGH:1:1109:13542:13284_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD6-6*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARGYSSSSEYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagggtatagcagctcgtcggagtactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2430 2429 M02948:180:000000000-JFBGH:1:1109:6479:13492_1:N: productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1150 100.00 230/230 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-19*01 F 2 10 9 21 10.9.21 [2.17.38.11] CARDFTGIAVAESDYYYYGMDVW in-frame + ccatctccggggacagtgtctctagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagagactttacaggtatagcagtggctgaatctgactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 388 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2431 2430 M02948:180:000000000-JFBGH:1:1109:23251:14388_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARGTGYGDYWYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcacgggatacggtgactactggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattccgctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2432 2431 M02948:180:000000000-JFBGH:1:1109:11639:16634_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD5-12*01 F 3 8 7 17 8.7.17 [3.17.38.11] CARVFSGYDDHYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaggctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtttttagtggctacgatgaccactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2433 2432 M02948:180:000000000-JFBGH:1:1109:22037:17691_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 3 10 7 9 10.7.9 [3.17.38.11] CAREYSYVDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagggaatacagctatgtagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2434 2433 M02948:180:000000000-JFBGH:1:1109:11559:19074_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 10 7 11 10.7.11 [3.17.38.11] CARDSGFYGRDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagactccggattctacgggagggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2435 2434 M02948:180:000000000-JFBGH:1:1109:7122:19451_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 989 93.72 209/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 2 8 8 13 8.8.13 [3.17.38.11] CAREGYGGKRLIDYW in-frame + tgcagcgtctggattcagattcagtagctatggcatgcactgggtccgccaggctccaggcagggggctggagtgggtggcaattatatggttcgatggaagttacaaatactatggagactccgtgaagggccgattcaccatctccagagacaattacaagaatacgctgtatcttcaaatgaacagcctgggagccgaggacacggctgtatattactgtgcgagagagggctacggtggtaaaaggctaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2436 2435 M02948:180:000000000-JFBGH:1:1109:16162:20746_1:N productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARVSTYFYDSSQRTPADYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagccttcatggagctgaggagcctgagatctgacgacacggctgtgtattactgtgcgagagtttcgacgtatttctatgatagtagccagcgaactcctgctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2437 2436 M02948:180:000000000-JFBGH:1:1109:9880:21404_1:N: productive Homsap IGHV3-11*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-18*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARDSIIQGFYYYGMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagattcaatcatacagggtttctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2438 2437 M02948:180:000000000-JFBGH:1:1109:20106:24291_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1055 97.73 215/220 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD2-2*02 F 2 8 7 19 8.7.19 [3.17.38.11] CARDSWPTDRYYYYYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagacagttggcctacagatcgatattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2439 2438 M02948:180:000000000-JFBGH:1:1108:22069:2683_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*04 (F) or Homsap IGHV1-3*05 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-25*01 F 2 8 8 7 8.8.7 [2.17.38.11] CAIMDAGYW in-frame + gcttctggatacatcttcactagctatgctatgcattgggtgcgccaggcccccggacaaagtcttgagtggatgggctggatcaactgtggcaatggtaacacatactattcacagaaattccagcgcagagtcaccattaccagggacacatccgcgagcacagcctacatggaactgagcagcctgagatctgaagacacggctgtgtattattgtgcgattatggatgcgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2440 2439 M02948:180:000000000-JFBGH:1:1108:18453:3749_1:N: productive Homsap IGHV4-31*03 F, or Homsap IGHV4-31*04 F 1130 100.00 226/226 nt Homsap IGHJ6*02 F (see comment) 220 83.87 52/62 nt Homsap IGHD2-2*01 F 3 10 7 19 10.7.19 [3.17.38.11] CARVVVVPAAERVYYYGMDVW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ5*02 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagcagtggtggttactactggagctggatccgccagcacccagggaagggcctggagtggattgggtacatctattacagtgggagcacctactacaacccgtccctcaagagtcgagttaccatatcagtagacacgtctaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcgagagttgtagtagtaccagctgctgaacgcgtatactactacggtatggacgtctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2441 2440 M02948:180:000000000-JFBGH:1:1108:15841:3965_1:N: productive Homsap IGHV3-7*01 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-16*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARDFEGAFDIW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccggggacacggctgtgtattactgtgcaagagattttgagggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2442 2441 M02948:180:000000000-JFBGH:1:1108:18106:5919_1:N: productive Homsap IGHV2-5*02 F 1182 97.19 242/249 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 10 7 10 10.7.10 [11.17.38.11] CAHSLTLGFDYW in-frame + acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagcggctgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcacagatttactgggatgatgacaagcggtacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacagtctcacattgggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2443 2442 M02948:180:000000000-JFBGH:1:1108:3987:8180_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 94.19 227/241 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 2 8 8 12 8.8.12 [9.17.38.11] CAREVAGTYCFDYW in-frame + gtccctgagactctcctgtgcagcctctggattcacctttagcagctgtgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagcagtggtggtgttaacacatactatgcagactccgcgaagggccggttcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcaagagaagtggctgggacgtactgctttgactactggggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2444 2443 M02948:180:000000000-JFBGH:1:1108:17707:9248_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD4-17*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDRGLGNHAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctatgtattactgtgcgagagataggggactagggaaccatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2445 2444 M02948:180:000000000-JFBGH:1:1108:4545:9353_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARDRDGDYYYGMDVW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaccgagacggtgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2446 2445 M02948:180:000000000-JFBGH:1:1108:10620:9647_1:N: No rearrangement found Homsap IGHV3-7*01 F 1106 99.55 222/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctgaattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagctttctcaagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 301 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2447 2446 M02948:180:000000000-JFBGH:1:1108:9886:10591_1:N: productive Homsap IGHV1-18*01 F 1061 99.53 213/214 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD5-18*01 F 1 8 8 21 8.8.21 [0.17.38.11] CARWHFDTAMVESDEGLYGMDVW in-frame + tggatacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaggtggcactttgatacagctatggttgagtcggatgaaggcctttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2448 2447 M02948:180:000000000-JFBGH:1:1108:17300:11396_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD4-17*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARVNGDYRAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtgaacggtgactacagggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2449 2448 M02948:180:000000000-JFBGH:1:1108:14760:12681_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD5-18*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARHRGYSYGHDAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaggcaccgtggatacagctatggtcatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2450 2449 M02948:180:000000000-JFBGH:1:1108:11056:12950_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARQYDSSGYYLDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagtatgatagtagtggttattatctcgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2451 2450 M02948:180:000000000-JFBGH:1:1108:11655:12992_1:N productive Homsap IGHV1-2*04 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARGSYSSSWYGYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggttcctatagcagcagctggtacggctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2452 2451 M02948:180:000000000-JFBGH:1:1108:11239:13968_1:N productive Homsap IGHV1-2*02 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARSTGTLLMPFYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaagcaccgggacgctactaatgcccttttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2453 2452 M02948:180:000000000-JFBGH:1:1108:26324:14477_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARRSYYGSGSTIDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaagatcttactatggttcggggagtacgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2454 2453 M02948:180:000000000-JFBGH:1:1108:4278:14703_1:N: productive Homsap IGHV3-33*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARGDYGDYLGDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagacgaggacacggctgtctattactgtgcgaggggtgactacggtgactacctcggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2455 2454 M02948:180:000000000-JFBGH:1:1108:16650:15349_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ5*02 F 163 82.98 39/47 nt Homsap IGHD5-24*01 ORF 3 8 8 7 8.8.7 [3.17.38.11] CARDGYRTW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggctacagaacctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2456 2455 M02948:180:000000000-JFBGH:1:1108:4820:15916_1:N: No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F (see comment) 485 68.61 153/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found low V-REGION identity (68.61%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtatattactgtgcgaaagatctcgttgtagtagtaccagcgtaccatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 279 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2457 2456 M02948:180:000000000-JFBGH:1:1108:8862:16090_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-22*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARVVVITTEAAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtagtggttattactactgaggctgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2458 2457 M02948:180:000000000-JFBGH:1:1108:9880:17007_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 182 95.00 38/40 nt 8 8 5 8.8.5 [2.17.38.11] CARDHVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaccacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2459 2458 M02948:180:000000000-JFBGH:1:1108:24600:17361_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-9*01 F 1 10 7 14 10.7.14 [3.17.38.11] CARDWLSYYYYGMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagactggctatcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2460 2459 M02948:180:000000000-JFBGH:1:1108:6760:18261_1:N: productive Homsap IGHV3-30*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD7-27*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARDLLDGADFW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctcgaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatctgctagatggggcggacttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2461 2460 M02948:180:000000000-JFBGH:1:1108:10246:18402_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-16*02 F 3 10 7 16 10.7.16 [3.17.38.11] CARDIGVIVSAKGAFDIW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatattggagttatcgttagcgctaagggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2462 2461 M02948:180:000000000-JFBGH:1:1108:7504:19020_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARGERDNNYYDSRIGCYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggaacgagataataattactatgatagcaggattgggtgctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2463 2462 M02948:180:000000000-JFBGH:1:1108:22410:19230_1:N productive Homsap IGHV3-48*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARDSRGYTDYW in-frame + tgcagcctctggaatcacctttagcagctatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagattcccgtggatacacggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2464 2463 M02948:180:000000000-JFBGH:1:1108:5930:19758_1:N: productive Homsap IGHV3-48*03 F 980 93.27 208/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CVASLSGWYNDGMDVW in-frame + tgcagcctctggattcaccttcgggagttacgacatgagttgggtccgccaggcaccggggaaggggctggagtgggtttcatacattaggagtgatggtggtaccacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtctatcactgtgttgctagtctcagtggctggtacaacgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2465 2464 M02948:180:000000000-JFBGH:1:1108:20041:19770_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1055 97.73 215/220 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD2-15*01 F 2 8 7 15 8.7.15 [3.17.38.11] CAREDCGGGSCYYLDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) cgctgtgtatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaaacaccaactacaacccgtccctcgagagtcgagtcaacatatcagtagacacgtccaagaaccagttctccctgaaggtgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagaggattgtggtggtggtagctgctactacctggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2466 2465 M02948:180:000000000-JFBGH:1:1108:19453:20229_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD5-24*01 ORF 1 8 7 16 8.7.16 [3.17.38.11] CARVGEMATISGWYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtaggagagatggctacaatttcaggctggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2467 2466 M02948:180:000000000-JFBGH:1:1108:19824:20260_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1037 96.82 213/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-16*01 F 1 8 7 19 8.7.19 [3.17.38.11] CAREMISVDRELSLNDAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtggacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaatgataagcgtcgaccgcgaattgagcctaaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2468 2467 M02948:180:000000000-JFBGH:1:1108:12036:21075_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt Homsap IGHD3-22*01 F 3 8 7 11 8.7.11 [3.17.38.11] CARVAELGYFDLW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcaagagtagcggaattggggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2469 2468 M02948:180:000000000-JFBGH:1:1108:25920:21333_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ4*01 F, or Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-2*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARASKGYCSSTSWFNW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcttcgaaaggatattgtagtagtaccagctggttcaactggggccacggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2470 2469 M02948:180:000000000-JFBGH:1:1108:11878:21548_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1061 97.31 217/223 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARDFYRVPAAIQNNWFDPW in-frame + tgcagcctctagattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcattcattagcagtagtagtagttacacatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctatgtattactgtgcgagagatttttacagggtaccagctgctattcaaaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2471 2470 M02948:180:000000000-JFBGH:1:1108:16520:21741_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-16*02 F 2 8 8 17 8.8.17 [2.17.38.11] CATGGDDYVWGSYRHLDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaggaggcgatgattacgtttgggggagttatcgtcaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2472 2471 M02948:180:000000000-JFBGH:1:1108:9832:24227_1:N: unproductive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-59*11 F or Homsap IGHV4-61*01 F or Homsap IGHV4-61*07 F or Homsap IGHV4-61*08 F 746 93.49 158/169 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD1-7*01 F 1 X 7 18 X.7.18 [X.11.38.11] CARLFEGPTGTTARGWCDPW in-frame + rearranged sequence, stop codons gcacccagggaggggcctggagtggatagggcacatatatgacagtgggagcaccaactacaactcctccctcaagagtcgagtcaccatataagtagacacgtccaagaaccagttcttcctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagattgttcgagggcccaactggaactactgctcggggctggtgcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccgttttccccc 0 0 287 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2473 2472 M02948:180:000000000-JFBGH:1:1107:11053:3667_1:N: productive Homsap IGHV4-61*01 F 1040 95.58 216/226 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-10*01 F 3 10 7 14 10.7.14 [3.17.38.11] CAIVMVRGSLYAFDIW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgatagtaatggttcggggaagcctttatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctggagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2474 2473 M02948:180:000000000-JFBGH:1:1107:10587:6954_1:N: productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1016 95.07 212/223 nt 94.62 211/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD1-7*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARRNNWNYGDAFDIW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT at codon 35 of V-REGION: 'AGT' (3 nucleotides at position 23 to 25 in the user submitted sequence), (do not cause frameshift); tgcagcctctgggttcaccgtcAGTaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgaaataactggaactacggggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2475 2474 M02948:180:000000000-JFBGH:1:1107:6687:7521_1:N:0 unproductive (see comment) Homsap IGHV4-34*03 F 1050 97.72 214/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-3*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARSDFWSGPNWFDPW in-frame + rearranged sequence, stop codons cgctgactatggtgggtccttcagtggttactagtggagttggatccgccagcccccagggaagggactggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagatccgatttttggagtggaccaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2476 2475 M02948:180:000000000-JFBGH:1:1107:7186:7548_1:N:0 productive Homsap IGHV4-61*08 F 1076 97.35 220/226 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-3*02 F 1 10 7 17 10.7.17 [3.17.38.11] CARDPFVEKDPWGPYFDYW in-frame + cactgtctctggtggctccatcagcagtggtggttactactggagctggatccgccagcacccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccatgtattactgtgcgagagatccattcgtcgagaaagacccttggggaccctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2477 2476 M02948:180:000000000-JFBGH:1:1107:14858:7556_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD5-24*01 ORF 3 10 7 26 10.7.26 [3.17.38.11] CARVGRDRDGYNIRAGALYYYYYYMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtggggagggatagagatggctacaatattcgggcgggggccctatactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 399 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2478 2477 M02948:180:000000000-JFBGH:1:1107:26642:7879_1:N: productive Homsap IGHV1-2*02 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 12 8.8.12 [2.17.38.11] CALGIAADNYFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgctctcggtatagcagcagataactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2479 2478 M02948:180:000000000-JFBGH:1:1107:21150:8731_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD3-10*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARDYYGLGYYYMDVW in-frame + cactgtctctggtggctccatcagtcgttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattactacggattgggctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2480 2479 M02948:180:000000000-JFBGH:1:1107:23546:9034_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARGRGIAVADIDYW in-frame + tgcagtctctggattcacctttagtaacaatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatattacgcagactcagtgaagggccgattcaccgtctccagagacaacgccaagaactcactgtatctacaaatgaacagcctgagagccggggacacggctgtgtattactgtgcaaggggacgcggtatagcagtggcagatattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2481 2480 M02948:180:000000000-JFBGH:1:1107:6169:9579_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-15*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKERAATPLGYFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctataagtgctagtggtggcagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagagagggctgctaccccgttaggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2482 2481 M02948:180:000000000-JFBGH:1:1107:8069:10484_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*02 F 2 8 8 14 8.8.14 [3.17.38.11] CANHRSGSYRYALGYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggatcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaatcatcgcagtgggagctaccgttatgcactaggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2483 2482 M02948:180:000000000-JFBGH:1:1107:1996:11627_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-2*01 F 3 8 7 19 8.7.19 [3.17.38.11] CARGGIDDIVVVPAANWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgggatcgacgatattgtagtagtaccagccgcaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2484 2483 M02948:180:000000000-JFBGH:1:1107:28644:11789_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-21*02 F 3 8 8 18 8.8.18 [3.17.38.11] CARHVVGTITSSYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtagtggggaccataacctctagctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2485 2484 M02948:180:000000000-JFBGH:1:1107:14376:12050_1:N productive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1081 99.54 217/218 nt 98.62 215/218 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD2-8*01 F 3 8 8 22 8.8.22 [3.17.36.11] CARDRTEGGVYAINYYYYYYMDVW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT at codon 93 of V-REGION: 'TCC' (3 nucleotides at position 188 to 190 in the user submitted sequence), (do not cause frameshift); in FR3-IMGT, from codon 94 of V-REGION: 5 nucleotides (from position 194 in the user submitted sequence), (cause frameshift) tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaatTCCagcagccgaggacacggctgtgtattactgtgcgagagatcggacggagggcggggtgtatgctataaattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 382 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2486 2485 M02948:180:000000000-JFBGH:1:1107:24647:16251_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-2*03 F 2 8 8 21 8.8.21 [2.17.38.11] CARGRVGYCSSTSCHRDGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcagagttggttattgtagtagtaccagctgccatcgggatggttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2487 2486 M02948:180:000000000-JFBGH:1:1107:11861:18157_1:N productive Homsap IGHV3-43D*04 F 1020 93.51 216/231 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [6.17.38.11] CAKDISRTYYYYAMDVW in-frame + ctctcctgtggagcctctggattcacctttagcagctatgccatgacctgggtccgtcaggctccagggaaggggctggagtgggtctcaattattagttgggatggtggtagcacatactatgcagactctgtgaagggtcgattcaccatctccagagacaacagcaaaaactccctgtatctgcaaatgaccagtctgagagctgaggacaccgccttgtattactgtgcaaaagatattagcaggacctactactactacgctatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 340 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2488 2487 M02948:180:000000000-JFBGH:1:1107:10248:18286_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD1-26*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARAVGWQQAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatctgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcggtcgggtggcagcaggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2489 2488 M02948:180:000000000-JFBGH:1:1107:21999:18557_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-21*01 F 1 8 8 11 8.8.11 [3.17.38.11] CAKMIGLRFLEYW in-frame + tggagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggcatgggtctcagctattagtagtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacatttccaggaacacgctgtatctgcaaatgaacaacctgagagccgaggacacggccgtgtattactgtgcgaaaatgatcggattacgatttttggagtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2490 2489 M02948:180:000000000-JFBGH:1:1107:17906:18589_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARAPAHIVGATVYYFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgcccgctcatatagtgggagctaccgtctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2491 2490 M02948:180:000000000-JFBGH:1:1107:5627:18741_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-21*01 F 1 8 7 14 8.7.14 [3.17.38.11] CAREGLWGTRFGFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagaaggattgtgggggaccagatttggatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2492 2491 M02948:180:000000000-JFBGH:1:1107:5280:20431_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-10*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARDKLWFGEFQFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagataagctatggttcggggagttccaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2493 2492 M02948:180:000000000-JFBGH:1:1107:9738:21256_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-25*01 F 1 8 8 12 8.8.12 [2.17.38.11] CASLANPGYSSVYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtctggcgaaccccgggtatagcagcgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2494 2493 M02948:180:000000000-JFBGH:1:1107:15327:22013_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1038 96.40 214/222 nt Homsap IGHJ3*02 F 187 86.00 43/50 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARRQKLGYSDSNYYFSIW in-frame + cagggttccggatacagttttaccaactactggatcggctgggtgcgccagatgccctggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagtacgtccttccaaggccaggtcaccatctcagtcgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgccagaagctgggatactctgatagtaattattatttctctatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2495 2494 M02948:180:000000000-JFBGH:1:1107:20069:22026_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 18 8.8.18 [3.17.38.11] CAKDLLKEKSGSQRSLFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatctactaaaagagaagagtgggagccaacggagtttatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2496 2495 M02948:180:000000000-JFBGH:1:1107:19788:22141_1:N unproductive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-6*01 F 3 8 8 X 8.8.X [3.17.38.11] CARDLGYSSSSRCLS#YYYGMDV* out-of-frame + rearranged sequence, stop codons; TRP 118 not identified tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatctagggtatagcagctcgtcgcggtgcctttcgactactactacggtatggacgtctgaggccaagggaccacggtaaccgtctcctcagggggtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2497 2496 M02948:180:000000000-JFBGH:1:1107:16057:22519_1:N productive Homsap IGHV3-11*04 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 67 61.36 27/44 nt Homsap IGHD7-27*01 F 2 8 8 6 8.8.6 [3.17.38.11] CARDLGYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatctaggctactggggccagggttccctggccccactggtcgacaccccctcgtctcctgtgagaattcccctcgcgatat 0 0 311 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2498 2497 M02948:180:000000000-JFBGH:1:1107:18800:23231_1:N productive Homsap IGHV4-38-2*01 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD5-12*01 F 1 9 7 12 9.7.12 [3.17.38.11] CARERPQARTFDIW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattattgtgcgagagaaaggccccaggcaaggacttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2499 2498 M02948:180:000000000-JFBGH:1:1107:11027:23332_1:N productive Homsap IGHV4-61*01 F 1094 98.23 222/226 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD6-13*01 F 2 10 7 13 10.7.13 [3.17.38.11] CARGIAAAGTLDGHW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcacctactacaacccgtccctcaagagtcgactcaccatatcagcagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggatagcagcagctggtacattggatggtcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2500 2499 M02948:180:000000000-JFBGH:1:1106:16406:2172_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt Homsap IGHJ1*01 F 197 86.54 45/52 nt Homsap IGHD4-11*01 ORF 3 8 8 19 8.8.19 [3.17.38.11] CARSDGSQDDMTTVSHLFQHW in-frame + aagggttctggatacagctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgagagccgaggacacggccgtgtattactgtgcgagatccgacggctcccaggatgacatgactacagtaagccacctcttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2501 2500 M02948:180:000000000-JFBGH:1:1106:18311:2260_1:N: productive Homsap IGHV1-18*01 F 951 92.69 203/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD1-14*01 ORF 3 8 8 11 8.8.11 [2.17.38.11] CARAPRDLAFDIW in-frame + gcttctgggtacacgtttgccagctatggtatcacctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcagtaataatggtaacacagactatgcgcagaagttccagggcggagtcaccatgaccacagacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagccccccgggaccttgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2502 2501 M02948:180:000000000-JFBGH:1:1106:9859:3951_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-3*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARQGEKYYDFWSGYHDGDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccacctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaaggagagaagtattacgatttttggagtggttatcatgatggggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2503 2502 M02948:180:000000000-JFBGH:1:1106:21463:5016_1:N: productive Homsap IGHV3-7*03 F 1052 96.86 216/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 25 8.8.25 [3.17.38.11] CARGGIYCSSTSCYGRNFNYDYYMDVW in-frame + tgcagcctctggattcacctttagcaactatctgatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaagtgagaaaaactatgtggactctgcgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagggggtatttattgtagtagtaccagctgctatgggcgcaactttaactacgactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 393 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2504 2503 M02948:180:000000000-JFBGH:1:1106:21449:5703_1:N: productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-16*02 F 2 8 8 18 8.8.18 [3.17.38.11] CARVCVDYVWGSYRGPNDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagtatgtgttgattacgtttgggggagttatcgtggccctaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaaccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2505 2504 M02948:180:000000000-JFBGH:1:1106:10055:5757_1:N: productive Homsap IGHV4-59*12 (F) 1091 99.55 219/220 nt Homsap IGHJ6*02 F 233 86.89 53/61 nt Homsap IGHD1-1*01 F 3 8 7 11 8.7.11 [3.17.38.11] CASRNDVYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagtaggaacgacgtctacggtatggacgtctggggccaagggaccacgatcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2506 2505 M02948:180:000000000-JFBGH:1:1106:3736:6189_1:N:0 productive Homsap IGHV3-48*04 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD4-17*01 F 2 8 8 20 8.8.20 [3.17.38.11] CAREYGDYVVGGYYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggaatgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagagtacggtgactacgtagtcgggggatactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2507 2506 M02948:180:000000000-JFBGH:1:1106:6502:6207_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-10*02 F 3 8 7 16 8.7.16 [3.17.38.11] CARDDRSITMSSYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatgacagaagtattactatgtcttcatacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2508 2507 M02948:180:000000000-JFBGH:1:1106:18208:6872_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F (see comment) 265 91.94 57/62 nt Homsap IGHD1-7*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARVFITGTRDDYYYYMDVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggtctttataactggaactagggacgactactactactacatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2509 2508 M02948:180:000000000-JFBGH:1:1106:20708:7385_1:N: productive Homsap IGHV3-48*03 F 1034 95.96 214/223 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKTTVGSAALGAYDIW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtttctgcaaatgaacagcctgagagccgaggacacggccatatattactgtgcgaaaactacggtagggtcagcggcattgggtgcttatgatatctggggccaagggtcaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2510 2509 M02948:180:000000000-JFBGH:1:1106:12599:8169_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-22*01 F 2 8 7 19 8.7.19 [3.17.38.11] CAREYYYDSSGYGYYYYMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagagtattactatgatagtagtggttatgggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2511 2510 M02948:180:000000000-JFBGH:1:1106:3734:8362_1:N:0 unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD6-19*01 F 1 8 8 X 8.8.X [2.17.38.11] CARGHQQV*QWQGGL#YYYYYGMDVW out-of-frame + rearranged sequence, stop codons gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccaccagcaggtatagcagtggcaaggagggcttttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2512 2511 M02948:180:000000000-JFBGH:1:1106:11539:8438_1:N: productive Homsap IGHV1-2*02 F, or Homsap IGHV1-2*06 F 1023 96.35 211/219 nt Homsap IGHJ1*01 F (see comment) 233 94.23 49/52 nt Homsap IGHD3-22*01 F 2 8 8 23 8.8.23 [2.17.38.11] CARGTLWGYYYDSSGYYMHEYFQHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggaaccctctggggttattactatgatagtagtggttattacatgcatgaatacttccagcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2513 2512 M02948:180:000000000-JFBGH:1:1106:13710:8789_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 3 8 8 23 8.8.23 [2.17.38.11] CARTNIVVVPAAIPTFDYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaacgaatattgtagtagtaccagctgctatccccactttcgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2514 2513 M02948:180:000000000-JFBGH:1:1106:4652:8990_1:N:0 unproductive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 1 8 8 X 8.8.X [3.17.38.11] CAKGEGWSGYFHKLG#YYYYMDVW out-of-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggtgaggggtggagtggttatttccacaagctcggaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2515 2514 M02948:180:000000000-JFBGH:1:1106:7950:9147_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARVRSYDSSRDFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgagagtgcgctcctatgatagtagtcgcgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2516 2515 M02948:180:000000000-JFBGH:1:1106:2897:9471_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 8 8 17 8.8.17 [3.17.38.11] CAKVGTTITTYYYHYMDVW in-frame + tgcagcctctggattcacctttaacagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccgcttaaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggggactacaataactacgtactactatcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2517 2516 M02948:180:000000000-JFBGH:1:1106:9636:10027_1:N: productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARVRSYSHYMDVW in-frame + other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagttaggtcgtatagtcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2518 2517 M02948:180:000000000-JFBGH:1:1106:23716:10961_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-13*01 F 1 8 8 14 8.8.14 [2.17.38.11] CASGHYSSSWSYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcgggcactatagcagcagctggtcctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2519 2518 M02948:180:000000000-JFBGH:1:1106:9001:13244_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1055 97.73 215/220 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD5-18*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARAKTYTVGAFDIW in-frame + tgctgcctctgggttcaccgtcagtagcaactacatgacctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtgatagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacggtgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtactactgtgcgagagcgaagacatatacggttggagcttttgatatctggggccaagggacaagggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2520 2519 M02948:180:000000000-JFBGH:1:1106:14755:13645_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD6-19*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARPQWLGQRAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctttgaccgccgcggacacggctgtgtattactgtgcgagaccccagtggctgggccagagggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2521 2520 M02948:180:000000000-JFBGH:1:1106:22524:13665_1:N unproductive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1034 95.96 214/223 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD3-22*01 F 2 8 8 22 8.8.22 [3.17.38.11] CAKCPHDYYDSSGYYGRY*YFDLW in-frame + rearranged sequence, stop codons tgcagcctctggattcacctttgatgattatggcatgagctgggtccgccaagctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcaaaatgccctcacgattactatgatagtagtggttattatggcaggtactagtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2522 2521 M02948:180:000000000-JFBGH:1:1106:20522:14449_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 1005 95.43 209/219 nt Homsap IGHJ1*01 F (see comment) 188 84.62 44/52 nt Homsap IGHD3-3*02 F 3 8 8 11 8.8.11 [2.17.38.11] CARDRFFGDFDPW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgcttttttggagacttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtacatccgccccaaccattttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2523 2522 M02948:180:000000000-JFBGH:1:1106:20684:14663_1:N productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-19*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAKGWGHAVASYRDYFDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaaggctggggccatgcagtggcatcgtacagggactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2524 2523 M02948:180:000000000-JFBGH:1:1106:28207:14906_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [2.17.38.11] CAREGGYGASRGGHYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagaaggaggatacggtgcctcccggggagggcactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2525 2524 M02948:180:000000000-JFBGH:1:1106:21583:16327_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARELLWFGELLYSW in-frame + tgcagcccctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaattactatggttcggggagttattatacagctggggccagggaaccctggtcaccgtctcctcagggagtgcatccaccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2526 2525 M02948:180:000000000-JFBGH:1:1106:28861:16874_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-16*02 F 2 8 8 14 8.8.14 [2.17.38.11] CASRGYSDWGSYRVDW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagccgtggatacagcgattgggggagttatcgagtagactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2527 2526 M02948:180:000000000-JFBGH:1:1106:9718:17445_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-13*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDRRYSSSYDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagataggcggtatagcagcagctatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2528 2527 M02948:180:000000000-JFBGH:1:1106:27622:17464_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD2-2*01 F 3 8 8 21 8.8.21 [3.17.38.11] CAKCSGEPAAMYPYYYYYGMDVW in-frame + tgcagcctctgggttcaccgtcagtagcagctacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatgcagtggggaaccagctgctatgtatccatactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2529 2528 M02948:180:000000000-JFBGH:1:1106:5303:17678_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARGDYCTSTSCPYPYYFDYW in-frame + tgcagcctctggattcacctttagcagttatggcatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttattagtggtagtggtggtagtacatacaacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggggattattgtactagtaccagctgcccatatccctactactttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2530 2529 M02948:180:000000000-JFBGH:1:1106:20163:18475_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 207 95.56 43/45 nt 8 8 6 8.8.6 [3.17.38.11] CARPFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2531 2530 M02948:180:000000000-JFBGH:1:1106:12054:19367_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 861 99.43 173/174 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD5-18*01 F 2 X 8 21 X.8.21 [X.12.38.11] CAKFMRSIQLWLVLPNYYGMDVW in-frame + caggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacagccgtatattactgtgcgaaatttatgaggtcgatacagctatggttagtcctcccaaactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 301 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2532 2531 M02948:180:000000000-JFBGH:1:1106:13224:19701_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARPDHYYDSSGYRDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacccgaccattactatgatagtagtggttaccgtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2533 2532 M02948:180:000000000-JFBGH:1:1106:17166:20494_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1032 96.80 212/219 nt Homsap IGHJ4*03 F (see comment) 150 79.17 38/48 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARGRAAAGMVPLMDVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) gcttctggttacacccttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtcgagcagcagctggtatggtccccctaatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2534 2533 M02948:180:000000000-JFBGH:1:1106:9075:21332_1:N: unproductive (see comment) Homsap IGHV4-38-2*01 F 962 92.38 206/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 1 9 7 22 9.7.22 [3.17.38.11] CAREERIL**YQL*QGGEKDLDYW in-frame + rearranged sequence, stop codons cggtgtctctggtcactccataagcagtgattacttctggggctggctccggcagccccctgggaaggggctggagtggattgggactatccatcatagtgggaacaccgactacaacccgtccctcgagagtcgtgtcaccatatcaatagacacgtccaagaaccaattctccctgaggctgagctctctgaccgccgcagacacggccgtgtattactgtgcgagagaagagcgcatattgtagtagtaccagctgtgacaagggggggaaaaagaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2535 2534 M02948:180:000000000-JFBGH:1:1106:7843:23243_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-21*02 F 2 8 8 13 8.8.13 [2.17.38.11] CARDGNHGGDYSDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgggaatcatggcggtgactactctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2536 2535 M02948:180:000000000-JFBGH:1:1105:12116:2786_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARGAGRSSLYYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcaagaggggccggtcgtagtagcctttactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2537 2536 M02948:180:000000000-JFBGH:1:1105:23131:3014_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ2*01 F 157 77.36 41/53 nt Homsap IGHD4-23*01 ORF 2 8 8 15 8.8.15 [2.17.38.11] CARVFDYGGKRNLLDLW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtctattactgtgcgagagtctttgactacggtggcaaacggaatttactcgatctctggggccgtggcaccctggtcactgtcacttcagagagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2538 2537 M02948:180:000000000-JFBGH:1:1105:9690:4380_1:N:0 unproductive Homsap IGHV3-23*03 F (see comment) 1037 96.82 213/220 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD4-11*01 ORF 1 8 7 X 8.7.X [3.17.38.11] CARVGGTVTTS##YWYFDLW out-of-frame + the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (7 AA in M02948:180:000000000-JFBGH:1:1105:9690:4380_1:N:0; 8 AA in Homsap IGHV3-23*03): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttaacagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagtcggtgggacagtaactacgtcttcgctactggtacttcgatctctggggccatggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccatcgtctcctgtgagaattcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2539 2538 M02948:180:000000000-JFBGH:1:1105:12890:5104_1:N: unproductive (see comment) Homsap IGHV3-11*03 F, or Homsap IGHV3-11*05 F (see comment) 360 78.63 92/117 nt Homsap IGHJ4*02 F (see comment) 195 89.58 43/48 nt Homsap IGHD2-21*01 F 1 X 1 X X.1.X [X.X.38.11] CARLR*GCCGGDVYCC#FDSW out-of-frame + rearranged sequence, stop codons low V-REGION identity (78.63%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgtagcctctgcctctggattcagggccgattcaccatctccagagacaacgccatgaactcactgtatgtgcacatgaacagcctgagcgacgaggacacggccatttgctactgtgcgagactccgttgaggatgttgtggtggtgatgtctactgctgtgctttgactcctggggccagggaaccctggccaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 268 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2540 2539 M02948:180:000000000-JFBGH:1:1105:19125:5192_1:N: unproductive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F (see comment) 175 75.81 47/62 nt Homsap IGHD4-17*01 F 2 8 8 X 8.8.X [3.17.38.11] CASGARTTVTGV#VW out-of-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccggggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagtggggccaggactacggtgactggagtaccgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2541 2540 M02948:180:000000000-JFBGH:1:1105:18476:5488_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [2.17.38.11] CASIVVVPAAIGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcctctattgtagtagtaccagctgctattggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2542 2541 M02948:180:000000000-JFBGH:1:1105:26206:6513_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-22*01 F 2 8 8 24 8.8.24 [2.17.38.11] CARAPTYYYDSSGYYGDLYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagctcctacgtattactatgatagtagtggttattacggcgatctctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccttgagaattcccctcgcgatat 0 0 385 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2543 2542 M02948:180:000000000-JFBGH:1:1105:22035:7069_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD6-25*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARVREAAGDAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagttagggaggccgcgggggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2544 2543 M02948:180:000000000-JFBGH:1:1105:14724:7718_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [2.17.38.11] CASRPETPILGYCSSTSCYFELW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagtcgtcctgaaaccccgatcctaggatattgtagtagtaccagctgctattttgagctctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2545 2544 M02948:180:000000000-JFBGH:1:1105:28259:7789_1:N: productive Homsap IGHV3-30*07 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-25*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARDGGYQLLPKNYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcaattatatcatctgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggggggtaccagctgctacccaagaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2546 2545 M02948:180:000000000-JFBGH:1:1105:18580:9366_1:N: productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 8 18 8.8.18 [2.17.38.11] CATGPRYSSGWNGGVYFDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagggcctcggtatagcagtggctggaatgggggggtttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2547 2546 M02948:180:000000000-JFBGH:1:1105:7310:9430_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARFIQGVAATDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagatttattcagggggtagctgccactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2548 2547 M02948:180:000000000-JFBGH:1:1105:28199:9473_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD4-17*01 F 3 8 8 17 8.8.17 [3.17.38.11] CASTTVTTTYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgtcgactacggtgacaacgacgtactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2549 2548 M02948:180:000000000-JFBGH:1:1105:12014:9735_1:N: productive (see comment) Homsap IGHV1-3*01 F, or Homsap IGHV1-3*04 (F) or Homsap IGHV1-3*05 F 705 100.00 141/141 nt 99.29 140/141 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-26*01 F 1 8 X 20 8.X.20 [2.3.34.11] CARVVGATVKTLPTTNNWFDPW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 42 of V-REGION: 78 nucleotides (from position 40 in the user submitted sequence), (do not cause frameshift) gcttctggatacaccttcactagctatgctatgcattggaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagtcgtgggagctaccgtcaagaccctccctactaccaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 296 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2550 2549 M02948:180:000000000-JFBGH:1:1105:8544:9822_1:N:0 productive Homsap IGHV4-34*03 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 2 8 7 22 8.7.22 [3.17.38.11] CARSLYGSGSYYGPEYYYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgaggtctctctatggttcggggagttattatgggcccgaatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2551 2550 M02948:180:000000000-JFBGH:1:1105:11275:11037_1:N productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 1 8 8 22 8.8.22 [3.17.38.11] CARTGELLWFGELFWLTNGAFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaacgggcgaattactatggttcggggagttattctggctcactaatggagcatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2552 2551 M02948:180:000000000-JFBGH:1:1105:21398:12563_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD4-23*01 ORF 1 8 8 10 8.8.10 [3.17.38.11] CGRSLLWRDDHW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctacaaatgaacagtctgagagacgaggacacggctgtgtattactgtggaaggtcactcctgtggagggatgaccactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2553 2552 M02948:180:000000000-JFBGH:1:1105:20632:13322_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 906 90.41 198/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARRGAVAGAYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatatattactgtgcgagacggggagcagtggctggtgcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2554 2553 M02948:180:000000000-JFBGH:1:1105:3082:13479_1:N: productive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 986 94.93 206/217 nt 94.47 205/217 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD2-15*01 F 2 8 6 18 8.6.18 [3.17.38.11] CARDGDGCSGGSCYNYMDVW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 57 of V-REGION: 6 nucleotides (from position 89 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcacctttagcagctatgccatgagctggttccgccaggctccagggaaggggctggagtgggtctcgactattaatagtggtaacacatactacgcagactccgtgaggggccggttcaccatctccagagacaattccaagaacacgttgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatggggatggttgtagtggtggtagctgctacaactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2555 2554 M02948:180:000000000-JFBGH:1:1105:12330:13735_1:N productive Homsap IGHV4-61*01 F 1103 98.67 223/226 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD6-25*01 F 2 10 7 9 10.7.9 [3.17.38.11] CARDSGGAAYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaggctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagattcgggtggtgcggcgtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2556 2555 M02948:180:000000000-JFBGH:1:1105:6015:14687_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD5-12*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARVGRVATIGDWFDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttggaagagtggctacgatcggagactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2557 2556 M02948:180:000000000-JFBGH:1:1105:11560:14867_1:N productive Homsap IGHV4-59*12 (F) 1100 100.00 220/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-16*02 F 2 8 7 21 8.7.21 [3.17.38.11] CARHYPGKDYVWGSYRPAYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagacactacccggggaaagattacgtttgggggagttatcgtccagcttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2558 2557 M02948:180:000000000-JFBGH:1:1105:9804:15985_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1130 100.00 226/226 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD2-2*01 F 3 8 7 18 8.7.18 [5.17.38.11] CATGSDIVVVPAARNWFDPW in-frame + cacctgcgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgactggatcggatattgtagtagtaccagctgctcgcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2559 2558 M02948:180:000000000-JFBGH:1:1105:25559:16073_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*02 F or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 755 100.00 151/151 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 2 X 8 14 X.8.14 [X.4.38.11] CARLPADFWSGFLGYW in-frame + gtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgccagccgatttttggagtggttttcttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 257 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2560 2559 M02948:180:000000000-JFBGH:1:1105:5479:16353_1:N: productive Homsap IGHV3-7*03 F 935 91.03 203/223 nt Homsap IGHJ3*01 F 151 78.00 39/50 nt Homsap IGHD3-9*01 F 2 8 8 7 8.8.7 [3.17.38.11] CLKDYQGDW in-frame + tgtagcgtctggattcccctttaatctctattggatgagttgggtccgccaggctccagggaaggggctggagtggctggccaacataaagggagatggaacagaagaaaactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactatatttgcaaatgagcagcctgagagccgaagacacggccgtctattactgtttgaaggattaccagggggactggggccaagggacagtggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2561 2560 M02948:180:000000000-JFBGH:1:1105:10546:16451_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-15*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARGYCSGGSCYHGDTYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggatattgtagtggtggtagctgctaccacggcgacacgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2562 2561 M02948:180:000000000-JFBGH:1:1105:13606:16527_1:N productive Homsap IGHV4-59*08 F 1091 99.55 219/220 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-16*01 F 1 8 7 11 8.7.11 [3.17.38.11] CARVGGAGAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgttttactgtgcgagagtggggggcgctggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2563 2562 M02948:180:000000000-JFBGH:1:1105:6008:16800_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-15*01 F 3 8 8 19 8.8.19 [3.17.38.11] CARASVSESVVAGKRDYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagcgtctgtctctgaaagcgtggtggctggtaagcgggactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2564 2563 M02948:180:000000000-JFBGH:1:1105:9132:17848_1:N: productive Homsap IGHV3-7*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 1 8 8 15 8.8.15 [3.17.38.11] CCNSRYSSSWYLTFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgttgcaactccaggtatagcagcagctggtaccttacttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2565 2564 M02948:180:000000000-JFBGH:1:1105:5576:18168_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARGEQQLARLDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggagagcagcagctggcacgccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgacaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2566 2565 M02948:180:000000000-JFBGH:1:1105:11976:18477_1:N productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-2*02 F 1 8 8 18 8.8.18 [2.17.38.11] CARKYKLLYGRYYYYGMDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccggggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaaagtacaagctgctatacgggaggtactactactacggtatggacatctggggccaagggaccacggtcaccgtctcctcagagagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2567 2566 M02948:180:000000000-JFBGH:1:1105:10279:19199_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ6*03 F (see comment) 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKGSTYYYNYYCYMDVW in-frame + other possibilities: Homsap IGHJ6*04 and Homsap IGHJ6*01 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggactgggtctcatctattgatggtagtggtgttaccacatactacgcagactccgtgaggggccggttcaccatctccagagacaattccaagaacacgctgtctctgcaaatgaacagcctgagaaccgaggacacggccgtatattactgtgcgaaaggaagtacttattactacaactactactgctacatggacgtctggggcagagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2568 2567 M02948:180:000000000-JFBGH:1:1105:27862:19255_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 3 8 8 14 8.8.14 [2.17.38.11] CATVSIFGVVIPFDYW in-frame + gcttctggaggcacctccagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagtatcgatttttggagtggttattccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2569 2568 M02948:180:000000000-JFBGH:1:1105:6581:21505_1:N: unproductive Homsap IGHV3-9*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-12*01 F 3 8 8 X 8.8.X [3.17.38.11] CARGVDSAAIS#DYW out-of-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccgtgtattactgtgcgagaggggtggattcagcagctatctcggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2570 2569 M02948:180:000000000-JFBGH:1:1105:15559:24431_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1089 98.22 221/225 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-1*01 F 1 8 7 9 8.7.9 [5.17.38.11] CARGRTGADYW in-frame + acctgcgctgtctctggttactccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattggatatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggcgaactggagctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 316 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2571 2570 M02948:180:000000000-JFBGH:1:1105:10257:24617_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARARIPGGWFDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgcgaattccggggggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2572 2571 M02948:180:000000000-JFBGH:1:1104:13772:2218_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD5-24*01 ORF 3 8 8 16 8.8.16 [3.17.38.11] CAREGLRDGYTSYYFDYW in-frame + tgcagcctctggattcacctttagtacctatgccatgatctggttccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagagggcctaagagatggctacacaagctactactttgactactggggcctgggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2573 2572 M02948:180:000000000-JFBGH:1:1104:24968:3547_1:N: unproductive (see comment) Homsap IGHV5-51*01 F 1199 98.38 243/247 nt Homsap IGHJ1*01 F 242 96.15 50/52 nt Homsap IGHD3-10*01 F 3 8 8 X 8.8.X [11.17.38.11] CARLSGCY*#EYFQHW out-of-frame + rearranged sequence, stop codons cggggggtcactgaagatcacctgtaagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcacgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactttcgggctgctactagtgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2574 2573 M02948:180:000000000-JFBGH:1:1104:5280:5737_1:N:0 No rearrangement found Homsap IGHV3-33*03 F 1061 97.31 217/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcccgagagccgaggacacggctgtttattactgtgcgagagaccccattactatgatagtagacggtatggacgtctggggccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 317 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2575 2574 M02948:180:000000000-JFBGH:1:1104:19286:5784_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 2 8 7 15 8.7.15 [3.17.38.11] CARDTAYGGNSGGFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatactgcgtacggtggtaactccgggggattcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2576 2575 M02948:180:000000000-JFBGH:1:1104:11505:5796_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARDEPSREGGSSGYYYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgaaccttccagagaagggggaagtagtggttattactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2577 2576 M02948:180:000000000-JFBGH:1:1104:7167:6267_1:N:0 unproductive (see comment) Homsap IGHV4-38-2*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 1 9 7 X 9.7.X [3.17.38.11] CASVVPAAITHGNGSSGWYP#FDYW out-of-frame + rearranged sequence, stop codons cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgtcagtagtaccagctgctatcacacacgggaatggtagcagtggctggtacccaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 385 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2578 2577 M02948:180:000000000-JFBGH:1:1104:15552:7227_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD4-17*01 F 2 8 7 13 8.7.13 [3.17.38.11] CAREYDYGDYVLDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgcccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagaatatgactacggtgactacgttttagacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2579 2578 M02948:180:000000000-JFBGH:1:1104:18847:7910_1:N: productive (see comment) Homsap IGHV4-55*01 P, or Homsap IGHV4-55*09 P 749 94.58 157/166 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD3-22*01 F 2 X 7 18 X.7.18 [X.10.38.11] CARANYYDSSGYPVFCMDVW in-frame + however the closest V is a pseudogene atatcgcgaggggctggagtggattggggaaatccatcatagtgggagcacctactacaacccgtccctcaagagtcgaatcaccatgtccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagccaattactatgatagtagtggttatcccgtcttttgtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 284 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2580 2579 M02948:180:000000000-JFBGH:1:1104:18207:8007_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARESCSSTSCHFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagagtcgtgtagtagtaccagctgccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2581 2580 M02948:180:000000000-JFBGH:1:1104:4333:10005_1:N: unproductive Homsap IGHV1-18*01 F (see comment) 1068 98.63 216/219 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD3-10*01 F 3 8 8 X 8.8.X [2.17.38.11] FARGGGYYYGSGSYYN#C out-of-frame + TRP 118 not identified 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactattcacagaagctccagggcagagtcaccatgaccacagacacatccacgagtacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactttgcgagaggaggaggatattactatggttcggggagttattataacctgcggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2582 2581 M02948:180:000000000-JFBGH:1:1104:4645:10377_1:N: productive (see comment) Homsap IGHV1-18*01 F 1015 100.00 203/203 nt 99.51 202/203 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [2.17.32.11] CARGDYYDSSGYYYW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 93 of V-REGION: 16 nucleotides (from position 184 in the user submitted sequence), (cause frameshift) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggacacggccgtgtattactgtgcgagaggggattactatgatagtagtggttattactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 337 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2583 2582 M02948:180:000000000-JFBGH:1:1104:25981:10695_1:N productive Homsap IGHV3-9*02 F 926 90.58 202/223 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CAKDVSGSYLFDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctctaatgattatgccatgcactgggtccggcaagttccagggaagggcctggagtgggtcggaggtatttactggaatagtggtaggataggatatgcggactctgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaatggcctgagagccgacgacacggccgtatattactgtgcgaaagatgttagtgggagctacctctttgactcctggggccagggaaccctggtcatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2584 2583 M02948:180:000000000-JFBGH:1:1104:26799:11586_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-1*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARETGTTDYGNDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaaactggaacgacggactacggtaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2585 2584 M02948:180:000000000-JFBGH:1:1104:3830:11656_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-16*01 F 2 8 8 10 8.8.10 [3.17.38.11] CAKWGSYPFDYW in-frame + aagggttctggatacaggtttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaaatgggggagctacccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2586 2585 M02948:180:000000000-JFBGH:1:1104:13655:12285_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1055 97.73 215/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 7 22 8.7.22 [3.17.38.11] CARFADRPTLRYYDSTSGDAFDIW in-frame + tgcagcctctgggttcaccgtcagtagcgactacatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatattacgcagactccgtgaagggccgattcaccatctccagagacagttccaagaacacgctgtatcttcaaatgaacagcctgagagccgcggacacggccgtgtattactgtgcgagattcgcggatcggccgacacttcgttactatgatagtacgagtggtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2587 2586 M02948:180:000000000-JFBGH:1:1104:18857:13237_1:N No rearrangement found Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattccccaccccaagactcctgtgagaattcccctcgcgatat 0 0 269 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2588 2587 M02948:180:000000000-JFBGH:1:1104:29313:13248_1:N productive Homsap IGHV3-48*04 F 1025 95.52 213/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARGVRYCSSTSCYDYYYYMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggccccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgagtattactgtgcaagaggagtaagatattgtagtagtaccagctgctatgactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2589 2588 M02948:180:000000000-JFBGH:1:1104:21772:14228_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARVAVAGYFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagttgctgtggcgggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2590 2589 M02948:180:000000000-JFBGH:1:1104:8531:14809_1:N: productive Homsap IGHV4-59*08 F 1073 98.64 217/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARGSSQSSSYVPFEYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagttgagttctatgaccgccgcagacacggccgtgtattactgtgcgagaggctcatcccaaagcagctcgtatgttccttttgaatactggggccagggaatcctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2591 2590 M02948:180:000000000-JFBGH:1:1104:2799:14924_1:N: productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*01 F 3 9 7 13 9.7.13 [3.17.38.11] CATTLVGVGPTLNYW in-frame + cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgactaccttggtcggagtaggacccaccctgaattactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2592 2591 M02948:180:000000000-JFBGH:1:1104:11365:16045_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD6-13*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARNGAAGTSVYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaaacggagcagctggtactagtgtctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2593 2592 M02948:180:000000000-JFBGH:1:1104:17340:16901_1:N productive Homsap IGHV1-2*02 F 1041 97.26 213/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARATGSSWSYYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagctacgggcagcagctggtcgtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2594 2593 M02948:180:000000000-JFBGH:1:1104:19085:17597_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 841 99.41 169/170 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 X 8 14 X.8.14 [X.10.38.11] CAREGYYYDSSGYYYW in-frame + cccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacatccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaagggtattactatgatagtagtggttattactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 276 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2595 2594 M02948:180:000000000-JFBGH:1:1104:15697:17847_1:N productive Homsap IGHV3-7*01 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD2-8*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARDVGSCTNGVCYARLDQW in-frame + tgcagcctctggattcaccttcagtaggtatattatgcactgggtccgccaggctccaggggaggggctggagtgggtggccaacataaacctagatggaggtgagcagtactatggggactctgtgaagggccgattcatcatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgtcggatcttgtactaatggtgtttgctatgcgcgtcttgaccagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2596 2595 M02948:180:000000000-JFBGH:1:1104:5916:18594_1:N: productive Homsap IGHV3-72*01 F 1118 98.69 226/229 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 8 10 10 8.10.10 [3.17.38.11] CASASAGSIEYW in-frame + tgcagcctctggattcatcttcagtgaccactacatggactgggtccgccaggctccagggaaggggctggagtgggttggccgtattagaaacaaagctaacagttacaccacagaatacgccgcgtctgtgaaaggcagattcaccatctcaagagatgattcaaagacctcactgtatctgcaaatgaacagcctgaaaaccgaggacacggccgtgtattactgtgctagcgccagtgctgggtctattgagtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2597 2596 M02948:180:000000000-JFBGH:1:1104:24626:21112_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-22*01 F 2 8 7 14 8.7.14 [3.17.38.11] CASHSSGSIGNWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagccatagtagtggttccattgggaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2598 2597 M02948:180:000000000-JFBGH:1:1104:10856:23047_1:N productive Homsap IGHV3-73*01 F, or Homsap IGHV3-73*02 F 1109 98.25 225/229 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD2-2*01 F 2 8 10 17 8.10.17 [3.17.38.11] CTRYCSSSSCSGSENFDIW in-frame + tgcagcctctgggttcaccttcagtgactctgctatgcactgggtccgccaggcttccgggaaagggctggagtgggttggccgtattagaaacaaagctaacagttatgcgacagcatatgctgcgtcggtgaaaggcaggttcaccatctccagagatgattcaaagaacacggcgtatctgcaaatgaacagcctgaaaaccgaagacacggccgtgtattactgtactagatattgtagtagtagcagctgctcgggctccgaaaattttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2599 2598 M02948:180:000000000-JFBGH:1:1104:16644:23713_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 174 90.48 38/42 nt Homsap IGHD1-26*01 F 3 8 8 5 8.8.5 [2.17.38.11] CATGGYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacagggggctattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2600 2599 M02948:180:000000000-JFBGH:1:1104:9109:23990_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLAAATYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2601 2600 M02948:180:000000000-JFBGH:1:1104:20461:24218_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-14*01 ORF 1 8 8 10 8.8.10 [2.17.38.11] CATRPGRTVDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacgaggcccggaagaacagtcgactactggggccagggaaccctggtcaccctctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2602 2601 M02948:180:000000000-JFBGH:1:1103:24311:2920_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 1 8 8 15 8.8.15 [3.17.38.11] CAIATGLGEISPYFDYW in-frame + tgcagcctctagattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccatatattactgtgcgatcgccacggggctcggggagatatccccttactttgactactggggccagggaattttagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattaccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2603 2602 M02948:180:000000000-JFBGH:1:1103:17421:5056_1:N: productive Homsap IGHV4-38-2*01 F (see comment) 1001 95.00 209/220 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-3*01 F 1 8 7 16 8.7.16 [3.17.38.11] CARGRVWVWWSGNWFDPW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR1-IMGT amino acid lengths (8 AA in M02948:180:000000000-JFBGH:1:1103:17421:5056_1:N:; 9 AA in Homsap IGHV4-38-2*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cgctgtctatggtgggtccttcagtggttactactggggctggatccggcagcccccagggaaggggctgcagtggattgggagtatctatcatagtgggagcacctactacagcccgtccctcaggggtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggtcgcgtttgggtgtggtggtccggcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2604 2603 M02948:180:000000000-JFBGH:1:1103:19217:5679_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-10*01 F 2 8 8 17 8.8.17 [3.17.38.11] CATQVHYYGSGRADAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgacacaggttcattactatggttcgggcagggccgatgcttttgatatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2605 2604 M02948:180:000000000-JFBGH:1:1103:3480:6936_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 163 82.98 39/47 nt Homsap IGHD6-13*01 F 1 8 8 7 8.8.7 [2.17.38.11] CATDRGSSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagatcgcggcagctcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2606 2605 M02948:180:000000000-JFBGH:1:1103:5891:7877_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-59*11 F or Homsap IGHV4-61*01 F or Homsap IGHV4-61*07 F or Homsap IGHV4-61*08 F 920 100.00 184/184 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-18*01 F 2 X 7 13 X.7.13 [X.16.38.11] CARVDKLWLPRQDYW in-frame + gagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtggataagctatggttacccagacaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 287 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2607 2606 M02948:180:000000000-JFBGH:1:1103:25876:8135_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKGVAYSGSSFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggggttgcgtatagtgggagctcatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2608 2607 M02948:180:000000000-JFBGH:1:1103:5345:8165_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-13*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARGTYSRYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaacctatagcagatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2609 2608 M02948:180:000000000-JFBGH:1:1103:12503:8575_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [3.17.38.11] CASTIAYNYYDSSGYPYYFDYW in-frame + aagggttctggatacaactttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatgggaatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtacaattgcctataattactatgatagtagtggttatccgtactactttgactactggggccagggaaccctggtcgccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2610 2609 M02948:180:000000000-JFBGH:1:1103:13639:9291_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-13*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKALAAAGLYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagctctagcagcagctggcctttattactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2611 2610 M02948:180:000000000-JFBGH:1:1103:17515:9310_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*02 F 2 8 8 18 8.8.18 [3.17.38.11] CAREVCSSTSCYTPNAFDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaggtttgtagtagtaccagctgctatacgcccaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2612 2611 M02948:180:000000000-JFBGH:1:1103:15821:9330_1:N: productive Homsap IGHV1-2*02 F 915 100.00 183/183 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-6*01 F 3 X 8 9 X.8.9 [X.15.38.11] CARARDWFDPW in-frame + tgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagcgcgcgactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 274 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2613 2612 M02948:180:000000000-JFBGH:1:1103:6242:9862_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-24*01 ORF 2 8 7 15 8.7.15 [3.17.38.11] CARGKGWLQLRGAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcaagggatggctacaattacggggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2614 2613 M02948:180:000000000-JFBGH:1:1103:15404:10174_1:N productive Homsap IGHV3-7*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [3.17.38.11] CAKDSRRSSGWYYFDYW in-frame + tgcagcctctggattcacctttagcaactatctgatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaagtgagaaaaactatgtggactctgcgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgtgcgaaagattcgcgtagaagtagtggctggtattattttgactattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2615 2614 M02948:180:000000000-JFBGH:1:1103:27025:10792_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-1*01 F 1 8 8 13 8.8.13 [3.17.38.11] CAVGPTTTHYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcggtcggtcctacaacgacccattactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgtcccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2616 2615 M02948:180:000000000-JFBGH:1:1103:28114:11156_1:N productive Homsap IGHV1-8*02 F 1059 98.17 215/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARVVAATKVVDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggtggtagctgctacaaaagttgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2617 2616 M02948:180:000000000-JFBGH:1:1103:6210:11552_1:N: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1001 93.01 213/229 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD3-10*02 F 1 8 10 9 8.10.9 [3.17.38.11] CLLLWFGEDSW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaaccaaaggtgaaggtgagacaacagactacgctgcacccgtgaaaggcagatttataatctcaagagatgattcaaaaaacacgctgtatttgcaaatgaacagcctgaaaaccgaggacacagccgtctattactgtttactactatggttcggggaagactcgtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2618 2617 M02948:180:000000000-JFBGH:1:1103:25786:12155_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-22*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARGWVVARSQYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggatgggtagtagcaagatcgcaatactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2619 2618 M02948:180:000000000-JFBGH:1:1103:4443:12393_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD6-13*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARNGAAGTSVYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaaacggagcagctggtactagtgtctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2620 2619 M02948:180:000000000-JFBGH:1:1103:5447:13408_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F or Homsap IGHV4-34*08 F 860 100.00 172/172 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 2 X 7 13 X.7.13 [X.12.38.11] CARGSRGGGGYPDYW in-frame + ccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggatctcggggggggggtggttaccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 275 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2621 2620 M02948:180:000000000-JFBGH:1:1103:6247:13985_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt 8 8 9 8.8.9 [3.17.38.11] CARRDWYFDLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2622 2621 M02948:180:000000000-JFBGH:1:1103:18363:16167_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 633 91.33 137/150 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-3*01 F 2 X 8 18 X.8.18 [X.4.38.11] CARDLENDFWSGYPFGFDYW in-frame + atatcgcgagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatctagaaaacgatttttggagtggttacccatttgggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 268 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2623 2622 M02948:180:000000000-JFBGH:1:1103:4879:17170_1:N: productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-16*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARDLWELPFYFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagagatttgtgggagctacccttctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2624 2623 M02948:180:000000000-JFBGH:1:1103:4295:18397_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 184 77.42 48/62 nt Homsap IGHD2-21*02 F 2 8 8 18 8.8.18 [3.17.38.11] CARSSGDYDSGTPPYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggtccagcggtgactacgattcgggaactccgccatactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2625 2624 M02948:180:000000000-JFBGH:1:1103:5966:19311_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAREGYCSGGTCYSNFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggctggggatcatctatcctagtgactctgaaaccagatacagcccgtccttccaaggccaggtctacatctcagtcgacaagtccatcagcaccgcctacctgcagtggagcagcctgagggcctcggacaccgccatgtattactgtgcgagggaaggctattgtagtggtggtacctgctactctaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2626 2625 M02948:180:000000000-JFBGH:1:1103:20030:19871_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD7-27*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARGKNSRGYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcaagaactcgcgaggctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2627 2626 M02948:180:000000000-JFBGH:1:1103:9622:20248_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 1 8 7 12 8.7.12 [3.17.38.11] CARGDTAMVPVDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggggatacagctatggtccctgttgactactggggccaggaaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2628 2627 M02948:180:000000000-JFBGH:1:1103:4626:20853_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-8*01 F 3 8 8 8 8.8.8 [3.17.38.11] CAKLTQSGVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagcaattggtggtagtgatggtaccacatactacgcagactccgtgaagggccggttcaccatctccagagtcaattccaagaacacgctgtatctgcaaatgaacagcctgcgagccgaagacacggccgtatattactgtgcgaaactaacgcagtctggcgtgtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2629 2628 M02948:180:000000000-JFBGH:1:1103:15235:22783_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-9*01 F 2 8 8 21 8.8.21 [2.17.38.11] CAGGGPRPDILTGYYLGGNLGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgggaggaggaccgcgacccgatattttgactggttattatttagggggtaatcttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2630 2629 M02948:180:000000000-JFBGH:1:1103:22457:23213_1:N productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARVGGSNYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggccaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtgggcggcagtaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2631 2630 M02948:180:000000000-JFBGH:1:1103:24469:23656_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD2-15*01 F 3 8 8 14 8.8.14 [2.17.38.11] CGRDRVFVERFGMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacactctacatggagctgagcagcctgagatctgaggacacggccgtgtattattgtgggagagatcgggtgttcgttgaaagattcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2632 2631 M02948:180:000000000-JFBGH:1:1118:23138:1923_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-9*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARSYYDFWSGPHTDYW in-frame + ttcagcctctggtttcacctttatcagctatgctatgatcttggtccgccaggctcctgggtatgggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgaagactccgttaagggccggttcaccatatccagagacaattccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaaggtcctattacgatttttggagtggtccccacactgactactggggccagggaaccctggtcaacgtctcctcagggagtgcatcagccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2633 2632 M02948:180:000000000-JFBGH:1:1118:23024:2589_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-17*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARGDYALDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcaggctgacatctgacgacacggccgtgtattactgtgcgaggggggactacgcccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2634 2633 M02948:180:000000000-JFBGH:1:1118:16607:3192_1:N: productive Homsap IGHV1-2*02 F 933 91.78 201/219 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD1-1*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARGDAIGKTGRFDPW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagaggcgatgctattgggaaaacagggaggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2635 2634 M02948:180:000000000-JFBGH:1:1118:6059:4236_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 2 8 8 11 8.8.11 [2.17.38.11] CATVSGEWELDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagtttctggggagtgggagctagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2636 2635 M02948:180:000000000-JFBGH:1:1118:7479:5230_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD4-11*01 ORF 2 8 8 22 8.8.22 [2.17.38.11] CARGLTDYSNPRLPYYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggggctgactgactacagtaaccctcgtttgccttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaaccctttccccctcgtctccttgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2637 2636 M02948:180:000000000-JFBGH:1:1118:5136:5810_1:N:0 productive Homsap IGHV1-2*02 F 1050 97.72 214/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-1*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARVSGMTNFVFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtctctggaatgactaattttgtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2638 2637 M02948:180:000000000-JFBGH:1:1118:7038:5997_1:N:0 productive Homsap IGHV1-8*01 F 1068 98.63 216/219 nt Homsap IGHJ6*02 F (see comment) 175 75.81 47/62 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [2.17.38.11] CAREYGDYVWLVDW in-frame + other possibilities: Homsap IGHJ6*01 and Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ5*02 (shorter alignment but highest percentage of identity) gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgacatctgaggacacggccgtctactactgtgcgagggagtacggcgactacgtttggctggtcgactggggccagggaaccccggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2639 2638 M02948:180:000000000-JFBGH:1:1118:26880:6216_1:N: productive Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD2-2*01 F 3 8 8 17 8.8.17 [3.17.38.11] CAKVGSVVPVQLYYGIDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtcgggtcagtagtaccagtccaattgtactacggtattgacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2640 2639 M02948:180:000000000-JFBGH:1:1118:11440:6301_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1068 98.63 216/219 nt Homsap IGHJ4*01 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARLLDIGAAGIDYW in-frame + gcttctggttacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccaaatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgttagatataggagcagctggtattgactactggggccaaggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2641 2640 M02948:180:000000000-JFBGH:1:1118:14437:6488_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 205 90.00 45/50 nt Homsap IGHD4-23*01 ORF 2 8 8 8 8.8.8 [2.17.38.11] CARGDGGDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgacggcggcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2642 2641 M02948:180:000000000-JFBGH:1:1118:22294:7439_1:N: productive Homsap IGHV4-38-2*01 F, or Homsap IGHV4-38-2*02 F 837 93.65 177/189 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-16*01 F 2 1 7 20 1.7.20 [X.17.38.11] CARADYGSGSYASQVPHDFDYW in-frame + gactggggctggatccggcagcccccagggaaggggctggagtggattgcaagtatgcatcacactggagccagttactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagccgactatggttcggggagttatgcttctcaggttcctcacgattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 313 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2643 2642 M02948:180:000000000-JFBGH:1:1118:27878:7834_1:N: productive Homsap IGHV4-61*01 F 1121 99.56 225/226 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD6-19*01 F 2 10 7 17 10.7.17 [3.17.38.11] CARTYVPIAVAGTPWFDPW in-frame + cactgtctctggtggctccgtcagcaatggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaacctacgtacctatagcagtggctggtaccccctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2644 2643 M02948:180:000000000-JFBGH:1:1118:14138:8397_1:N: productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD4-23*01 ORF 2 9 7 12 9.7.12 [3.17.38.11] CARGYYGGNSVDIW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagaggatactacggtggtaactccgttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2645 2644 M02948:180:000000000-JFBGH:1:1118:24280:9059_1:N: productive Homsap IGHV3-9*01 F 1079 98.21 219/223 nt Homsap IGHJ6*02 F (see comment) 163 76.79 43/56 nt Homsap IGHD2-15*01 F 2 8 8 11 8.8.11 [3.17.38.11] CAKDISPGGADVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgaaagatattagtcctggcggtgcggacgtctggggccaagggaccacggtcatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2646 2645 M02948:180:000000000-JFBGH:1:1118:13111:9234_1:N: productive Homsap IGHV4-39*07 F 1085 97.79 221/226 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-10*01 F 1 10 7 9 10.7.9 [3.17.38.11] CARGGDYFDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaaggggctggagtggattgggagtatctattatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgccagaggaggggattactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2647 2646 M02948:180:000000000-JFBGH:1:1118:21645:9420_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-13*01 F 1 8 8 11 8.8.11 [3.17.38.11] CATFGISWHSSYW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagttacacaagccacgtggactccgtgaagggccgattcgccatctccagaaacaacgccgagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaacctttggcatcagctggcacagtagctactggggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2648 2647 M02948:180:000000000-JFBGH:1:1118:12031:9928_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD1-26*01 F 1 8 8 22 8.8.22 [3.17.38.11] CARTILGVGATPPFEYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaacgatactcggagtgggagctaccccaccgttcgaatattactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2649 2648 M02948:180:000000000-JFBGH:1:1118:9943:10326_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARSFGFWSGILDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagatccttcggtttttggagtggaattttagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2650 2649 M02948:180:000000000-JFBGH:1:1118:17912:10562_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARRVGSDYQIDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgcgtcggatctgactaccaaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2651 2650 M02948:180:000000000-JFBGH:1:1118:26412:10751_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1037 96.82 213/220 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD4-23*01 ORF 3 8 7 18 8.7.18 [3.17.38.11] CARDLTTVVTPSLHNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgctagagacctgactacggtggtaactccttccctccacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2652 2651 M02948:180:000000000-JFBGH:1:1118:17441:10930_1:N productive Homsap IGHV3-30*07 F 1025 95.52 213/223 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD3-10*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARVRVRGVRNGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatggatagtctgagagccgaggacacggctgtctattattgtgcgagagtgcgggttcggggagttagaaacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2653 2652 M02948:180:000000000-JFBGH:1:1118:23367:11114_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-21*02 F 2 8 8 16 8.8.16 [3.17.38.11] CAKDSLAYCGGDCYLDYW in-frame + tgcagcctctggattcacctttagcagctgtgccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctatcagtggtagtgggagtaccacatactatgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtacattactgtgcgaaagattccctagcatattgtggtggtgactgctaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2654 2653 M02948:180:000000000-JFBGH:1:1118:10875:12649_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD6-19*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARPQWLGQRAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaccccagtggctgggccagagggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2655 2654 M02948:180:000000000-JFBGH:1:1118:14394:13326_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 8 8 17 8.8.17 [3.17.38.11] CAKVGTTITTYYYHYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccgcttaaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggggactacaataactacgtactactatcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2656 2655 M02948:180:000000000-JFBGH:1:1118:17200:13402_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F (see comment) 183 84.31 43/51 nt Homsap IGHD3-10*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARGVLLWFGELLGPFDPW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) ggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggggggtattactatggttcggggagttattaggtcccttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2657 2656 M02948:180:000000000-JFBGH:1:1118:10259:13615_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-24*01 ORF 3 8 8 12 8.8.12 [3.17.38.11] CARLRDIGYNYGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggctccgtgatataggctacaattacggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2658 2657 M02948:180:000000000-JFBGH:1:1118:24237:14949_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD4-17*01 F 3 8 8 21 8.8.21 [3.17.38.11] CAVGAMTTVTTQSDYYYYGMDVW in-frame + aaggcttctggatacagctttaacagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggccttggacaccgccatgtattactgtgcggtaggtgctatgactacggtgactacgcaatctgactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2659 2658 M02948:180:000000000-JFBGH:1:1118:5563:15351_1:N: productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD1-26*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARLLPYYYYYMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagactactaccttactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2660 2659 M02948:180:000000000-JFBGH:1:1118:15950:16206_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARGGSSGWYQGKTDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggagggagcagtggctggtaccaggggaaaacagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2661 2660 M02948:180:000000000-JFBGH:1:1118:9419:17894_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 273 95.00 57/60 nt Homsap IGHD3-10*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARSDYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatcggactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttcccccacatttcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2662 2661 M02948:180:000000000-JFBGH:1:1118:15507:18769_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-2*01 F 3 8 8 16 8.8.16 [3.17.38.11] CAKDIRERVVPADAFDIW in-frame + tgcagcctctggattcaccttcagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatataagggagcgggtagtaccagctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2663 2662 M02948:180:000000000-JFBGH:1:1118:7616:19233_1:N: No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 275 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2664 2663 M02948:180:000000000-JFBGH:1:1118:20066:19774_1:N productive Homsap IGHV1-8*02 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [2.17.38.11] CAAHEYDSSGPLRFW in-frame + gcttctggaggcaccttcagcagctatgctatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggctcacgaatatgatagtagtggtccgctgcgtttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2665 2664 M02948:180:000000000-JFBGH:1:1118:4421:20819_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-23*01 ORF 2 8 8 9 8.8.9 [2.17.38.11] CALGNSDFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgctcttgggaattcggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2666 2665 M02948:180:000000000-JFBGH:1:1118:23418:20889_1:N productive Homsap IGHV4-59*02 F, or Homsap IGHV4-59*03 F or Homsap IGHV4-59*13 F 965 93.18 205/220 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD2-21*01 F 3 8 7 12 8.7.12 [3.17.38.11] CARLGIANYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cactgtccctggtgactccgtcaatacttactactggagctggatccggcagcccccgggggggggattggagtggattgggtatatctcttacagtgggagcaccaactacagcccctccctcaggagtcgagtcaccatgtcagtagacacgtccaagaaccaattctccctgacgctgagctctgtgaccgctgcggacacggccgtttattactgtgcgagactgggaattgccaattactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2667 2666 M02948:180:000000000-JFBGH:1:1118:6939:21238_1:N: No rearrangement found Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1088 98.65 220/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacaacctgagagccgaggacacggctgtttattactgtgcgagtctcgtctcctgtgagaattcccctcgcgatat 0 0 261 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2668 2667 M02948:180:000000000-JFBGH:1:1118:7659:21837_1:N: unproductive (see comment) Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 3 8 8 X 8.8.X [3.17.38.11] CARRA*LRR#YW out-of-frame + rearranged sequence, stop codons tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtggcggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaagggcgtaactacgtcggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 346 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2669 2668 M02948:180:000000000-JFBGH:1:1118:13277:22187_1:N productive Homsap IGHV4-59*12 (F) 1091 99.55 219/220 nt Homsap IGHJ4*02 F (see comment) 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARGGTPLLRSRGRFDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgggaccccactactacgtagtcgcggccgttttgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2670 2669 M02948:180:000000000-JFBGH:1:1118:17829:22743_1:N productive Homsap IGHV1-2*02 F 1014 95.89 210/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-23*01 ORF 3 8 8 12 8.8.12 [2.17.38.11] CARGGPITMIVDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggcggccccattactatgatagtagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2671 2670 M02948:180:000000000-JFBGH:1:1118:9499:23012_1:N: productive Homsap IGHV3-21*07 (F) 1034 95.96 214/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD5-18*01 F 3 8 8 17 8.8.17 [3.17.38.11] CAKDRRRYSYGGTDAFDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgcaaggctccagggaaggggctggagtgggtctcagctattagtagtagtggtagtaccatatactacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcgacgcagatacagctatggggggacagatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2672 2671 M02948:180:000000000-JFBGH:1:1118:24211:23568_1:N productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 193 79.03 49/62 nt Homsap IGHD3-10*01 F 2 10 9 13 10.9.13 [X.17.38.11] CARGDYYGSGRPDVW in-frame + ggggacagtgtctctagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcccggggcgattactatggttcggggagaccggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 325 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2673 2672 M02948:180:000000000-JFBGH:1:1118:12587:24819_1:N productive Homsap IGHV1-18*01 F 969 93.61 205/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-11*01 ORF 3 8 8 14 8.8.14 [2.17.38.11] CARRATTVTTYYFDYW in-frame + gcttctggttacacctttaccagttatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatggggtggatcagcccttacaacggtaacacaaactctgtacagaagctccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacgggcgactacagtaactacgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2674 2673 M02948:180:000000000-JFBGH:1:1117:11999:2459_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKDRRGYNYGYFDYW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtctctgcaaatgaacagcctgagaggcgaggacacggccatatattactgtgcgaaagatcgtcgtggatataattatggttattttgattattggggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2675 2674 M02948:180:000000000-JFBGH:1:1117:23347:2492_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD4-23*01 ORF 2 8 8 14 8.8.14 [3.17.38.11] CSQGGESYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacggcgtatctgcaaatgaacagcctgaaaaccgaggacacggccgtgtattactgttctcagggtggggagtcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2676 2675 M02948:180:000000000-JFBGH:1:1117:19424:2532_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARVHSSGWYFGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttcacagcagtggctggtactttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2677 2676 M02948:180:000000000-JFBGH:1:1117:6493:3744_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-10*01 F 2 8 8 21 8.8.21 [3.17.38.11] CASRPYYYGSGSYYERNDAFDIW in-frame + aagggttctggatacagctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcttctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagccgcccgtattactatggttcggggagttattacgagcgcaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2678 2677 M02948:180:000000000-JFBGH:1:1117:12330:5904_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-13*01 F 3 8 8 22 8.8.22 [3.17.38.11] CAKDPGHRAKLLWRQQLVSRVNYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgagagccgaggacacggccgtatattactgtgcgaaagatccaggccatcgggccaagctgctatggcggcagcagctggtgtctagggtgaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2679 2678 M02948:180:000000000-JFBGH:1:1117:27338:8660_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD5-24*01 ORF 2 8 7 14 8.7.14 [3.17.38.11] CARGRGQYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgagggcaatactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2680 2679 M02948:180:000000000-JFBGH:1:1117:6183:9513_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1055 100.00 211/211 nt Homsap IGHJ5*02 F 138 74.51 38/51 nt Homsap IGHD1-26*01 F 3 7 8 8 7.8.8 [X.17.38.11] CARVGARQPW in-frame + aggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtaggtgcgagacaaccttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 299 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2681 2680 M02948:180:000000000-JFBGH:1:1117:19321:9668_1:N: productive Homsap IGHV1-2*02 F 885 100.00 177/177 nt Homsap IGHJ1*01 F 224 92.31 48/52 nt Homsap IGHD3-22*01 F 2 X 8 19 X.8.19 [X.13.38.11] CARDYYDSSGYLFRWGYFQHW in-frame + cgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagattactatgatagtagtggttatttattccggtggggatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 298 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2682 2681 M02948:180:000000000-JFBGH:1:1117:5844:10715_1:N: productive Homsap IGHV3-30*07 F, or Homsap IGHV3-30*12 F 830 97.14 170/175 nt Homsap IGHJ4*02 F, or Homsap IGHJ4*03 F (see comment) 168 83.33 40/48 nt Homsap IGHD4-17*01 F 2 X 8 14 X.8.14 [X.12.38.11] CARDPPAPEHGDYVYW in-frame + other possibilities: Homsap IGHJ1*01 (highest number of consecutive identical nucleotides) ccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacggtgtatcttcacatgaacagtctgagagccgaggacacggccgtgtattactgtgcgagagatcccccggcccctgagcacggtgattatgtgtactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 281 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2683 2682 M02948:180:000000000-JFBGH:1:1117:10275:10736_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 944 91.48 204/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAKRDFFHMSASYYPYYFDHW in-frame + tgcagcctctggattcacctttagcaactatgccttgagctgggtccgccaggctccagggaaggggcttgagtgggtctcaggtattggtattagtggtgatagtacatactacgcagactctctgaagggccggttcagcatatccagagacaattccaagaacacggtgtatctgcaaatgagcagcctgggcgtcgaagacacggccgtatattactgtgcgaagagggatttctttcatatgagtgcttcttactacccctactactttgaccactggggccagggatccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2684 2683 M02948:180:000000000-JFBGH:1:1117:29031:12623_1:N productive Homsap IGHV3-48*01 F 998 94.17 210/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*01 F 2 8 8 9 8.8.9 [3.17.38.11] CATTARLFESW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtatctgcagatgaccagcctgcgggccgaggactcggccgtatattactgtgcgacgaccgcccgcttatttgaatcttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2685 2684 M02948:180:000000000-JFBGH:1:1117:24804:12806_1:N productive Homsap IGHV3-7*03 F 989 93.72 209/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 1 8 8 11 8.8.11 [3.17.38.11] CAKDVMGSSSVYW in-frame + tgtagcctctggattcacctttaccaatttttggatgagttgggtccgccaggctccagggaaggggctggagtgggtggccaacgtaaagacagatggaagtgacaaatactatgtggactctgtgaggggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgagggcacggccgtatattactgtgcgaaagacgtgatgggcagctcgtcagtgtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2686 2685 M02948:180:000000000-JFBGH:1:1117:13071:13803_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-17*01 F 2 8 8 16 8.8.16 [2.17.38.11] CAKSAYGDYHLFYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtatattactgtgcgaaatcagcctacggtgactaccatctgttctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2687 2686 M02948:180:000000000-JFBGH:1:1117:14121:14256_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 196 97.56 40/41 nt 8 8 5 8.8.5 [2.17.38.11] CAREDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2688 2687 M02948:180:000000000-JFBGH:1:1117:13231:14796_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-1*01 F 1 8 7 16 8.7.16 [3.17.38.11] CARGPRARGSLYNWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccctcgagcaagaggaagcctgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2689 2688 M02948:180:000000000-JFBGH:1:1117:21867:15744_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 974 93.64 206/220 nt Homsap IGHJ6*02 F 230 90.91 50/55 nt Homsap IGHD1-26*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARDGNYGMDVW in-frame + tgcagcctctgggttcaccgtcagtggcaccgaagtgagctgggtccgcctggctccagggaaggggctggagtgggtctcagttatttatagcgctggtagcacatactacgtagactccgtgaagggccgattcaccatctccagggacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagatgggaactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2690 2689 M02948:180:000000000-JFBGH:1:1117:14362:19400_1:N unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1050 97.72 214/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-2*02 F 2 8 8 26 8.8.26 [2.17.38.11] CARVGFWDCSSTSCYIGGGSYYYGMDVW in-frame + rearranged sequence, stop codons gcttctggaggcaccttcagcggctatgctatcagctgggtgcgacaggctcctggacaagggcttgagtggatgggtgggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgatcacagcctacatgtagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtcggattttgggattgtagtagtaccagctgctatattgggggcgggtcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 392 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2691 2690 M02948:180:000000000-JFBGH:1:1117:24196:19763_1:N productive Homsap IGHV4-59*03 F 1073 98.64 217/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 7 16 8.7.16 [3.17.38.11] CACRPLEYYDSSGVFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatccattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtggacacgtccaagaaccaaatctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgtgtcgacctctcgagtactatgatagtagtggcgtttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2692 2691 M02948:180:000000000-JFBGH:1:1117:26483:20128_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD6-6*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARDRVHSSSSICMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgagtgcatagcagctcgtccatatgtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2693 2692 M02948:180:000000000-JFBGH:1:1117:24974:21001_1:N productive Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 22 8.8.22 [3.17.38.11] CATPRGYSDYYYDSSGYYFYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagatctgaggacacggccgtgtattactgtgcaaccccgaggggatatagcgattattactatgatagtagtggttattacttttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattgccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2694 2693 M02948:180:000000000-JFBGH:1:1117:12442:21164_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARSSTSCYSEGFFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagtagtaccagctgctactccgagggtttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2695 2694 M02948:180:000000000-JFBGH:1:1117:18265:22629_1:N productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ6*03 F (see comment) 164 75.86 44/58 nt Homsap IGHD1-20*01 F 1 8 8 11 8.8.11 [2.17.38.11] CARDSLTGIEDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtgacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagattccttaactggaatcgaggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2696 2695 M02948:180:000000000-JFBGH:1:1117:20841:22923_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD1-7*01 F 1 8 7 15 8.7.15 [3.17.38.11] CAGTGTPHYYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgggaactggaactccccactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2697 2696 M02948:180:000000000-JFBGH:1:1117:11821:23606_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARYRGRYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatatagggggcgatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2698 2697 M02948:180:000000000-JFBGH:1:1117:23313:24677_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 915 90.87 199/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-12*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARPNVWLRSFDYW in-frame + gcatctggatacaccttcaccacctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggtggaatcgaccctagtggtggtgccacaacctacgcacggaagttccagggcagagtcaccatgatcagagacatgtccacggtcacagtttatttggagctgagtagcctgacatctgacgacacggccgtgtattactgtgcgaggcctaatgtgtggctacgcagctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2699 2698 M02948:180:000000000-JFBGH:1:1117:23018:25001_1:N productive Homsap IGHV4-34*03 F 1077 99.09 217/219 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD1-26*01 F 3 8 7 16 8.7.16 [3.17.38.11] CAREFGGSYSRLWSFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagagtttggcgggagctactcccgcctttggtcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2700 2699 M02948:180:000000000-JFBGH:1:1117:10038:25066_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1028 96.36 212/220 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD3-10*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARVRDYYGSGSYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctacggacacggccgtgtattactgtgcgagagttagggattactatggttcggggagttactactactacatggacgtctggggcaaagggacaacggtcaccgtctcctcagggggtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2701 2700 M02948:180:000000000-JFBGH:1:2119:16110:1969_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1196 99.59 240/241 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 2 8 8 17 8.8.17 [9.17.38.11] CAKDRRYYYGSGSYPSDYW in-frame + ggccctgagactctcctgtgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcgccggtattactacggttcggggagttatccctctgactactggggacagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2702 2701 M02948:180:000000000-JFBGH:1:2119:17699:2374_1:N: productive Homsap IGHV3-43D*04 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKDMVRTYYYYGMDVW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtctctcttattagttgggatggtagtagcacatactatgcagactctgtgaagggtcgattcaccatctccagagacaacagcaaaaactccctgtatctgcaaatgaacagtctgagagctgaggacaccgccttatattactgtgcaaaagatatggttcggacctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2703 2702 M02948:180:000000000-JFBGH:1:2119:20577:2450_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD4-17*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARHAATVPNNWFDPW in-frame + aagggttctggatacagttttaccaactactggatcgcctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccaggtacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgagggcctcggacaccgccatgtattactgtgcgagacatgcggctacggtgcctaacaactggttcgacccctggggccagggaaccctagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2704 2703 M02948:180:000000000-JFBGH:1:2119:9880:3057_1:N:0 productive Homsap IGHV1-18*01 F 1023 96.35 211/219 nt Homsap IGHJ3*01 F 142 76.00 38/50 nt Homsap IGHD5-12*01 F 1 8 8 9 8.8.9 [2.17.38.11] CARGGVPPMDW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtggggtgcccccgatggactggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2705 2704 M02948:180:000000000-JFBGH:1:2119:8809:3063_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 205 100.00 41/41 nt 8 8 5 8.8.5 [3.17.38.11] CARDDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaaggactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtatattactgtgcgagagatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2706 2705 M02948:180:000000000-JFBGH:1:2119:10106:3150_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD3-16*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARMETVGGEIWYFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaatggaaacggttggcggtgagatctggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2707 2706 M02948:180:000000000-JFBGH:1:2119:26179:4722_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARGLHPPWLLLQGVDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgcttaaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagaggactgcatcctccgtggttattactacaaggggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2708 2707 M02948:180:000000000-JFBGH:1:2119:8224:7723_1:N:0 productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 906 99.45 182/183 nt 98.91 181/183 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*01 F 2 8 8 17 8.8.17 [3.17.25.11] CARGYCSSTSCYLGAFDIW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 85 of V-REGION: 39 nucleotides (from position 163 in the user submitted sequence), (do not cause frameshift) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcaacaccgccatgtattactgtgcgagaggatattgtagtagtaccagctgctatctgggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2709 2708 M02948:180:000000000-JFBGH:1:2119:8742:8490_1:N:0 productive Homsap IGHV3-48*03 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 172 85.11 40/47 nt Homsap IGHD7-27*01 F 1 8 8 6 8.8.6 [3.17.38.11] CARTWDCW in-frame + tgcagcctctggattcacctttagtgattattggatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagaggtagtaccacatactacgcagactctgtggagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgcgcgaggacttgggactgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2710 2709 M02948:180:000000000-JFBGH:1:2119:19357:9115_1:N: unproductive (see comment) Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-15*01 F 1 8 8 X 8.8.X [2.17.38.11] CARDPGTPCHHVGGLVVGG#AFDIW out-of-frame + rearranged sequence, stop codons gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatccgggtaccccgtgtcatcatgtaggtggtttagtggtggggggacgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2711 2710 M02948:180:000000000-JFBGH:1:2119:9895:9141_1:N:0 productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1016 95.07 212/223 nt Homsap IGHJ5*02 F (see comment) 156 78.43 40/51 nt Homsap IGHD3-16*01 F 3 9 7 13 9.7.13 [3.17.38.11] CARVAGGTFGGVDQW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctctggtgactccatcagcaatagtcactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcattctgggagcaccaactacagcccgtccctcaagagtcgagtcaccatatcagtagacaagtcgaagaaccagttctccgtgaggctgaactctgcgaccgccgcggacacggccgtgtattactgtgcgagagttgcgggaggaacgtttgggggtgtcgaccagtggggccagggaaccctggtcaccatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2712 2711 M02948:180:000000000-JFBGH:1:2119:25123:9218_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 2 8 8 25 8.8.25 [3.17.38.11] CARHYPGYCSSTSCYGGYYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctatctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattacccaggatattgtagtagtaccagctgctatgggggttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 392 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2713 2712 M02948:180:000000000-JFBGH:1:2119:27117:10391_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1070 97.76 218/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-22*01 F 3 8 8 19 8.8.19 [3.17.38.11] CAREQVTITMIVYHYYGMDVW in-frame + tgcagcctctggattcacctttagtaggtattggatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagcaggtgactattactatgatagtctaccactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2714 2713 M02948:180:000000000-JFBGH:1:2119:6673:10756_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARASYDYGTGSDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagggccagttatgactacgggactggtagtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2715 2714 M02948:180:000000000-JFBGH:1:2119:2204:12630_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-3*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARYDFWSGYTTQLGLGWFDPW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagatacgatttttggagtggttatactacacaattggggctaggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2716 2715 M02948:180:000000000-JFBGH:1:2119:2251:13039_1:N: productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD3-3*01 F 1 8 8 14 8.8.14 [2.17.38.11] CATVRGLEWLLGFDPW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagtgagggggctggagtggttattggggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2717 2716 M02948:180:000000000-JFBGH:1:2119:20746:13334_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARARHCSGGSCYPELGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgacgacacggccgtgtatttctgtgcgagggcccgacattgtagtggtggtagctgctaccccgaacttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2718 2717 M02948:180:000000000-JFBGH:1:2119:25238:13818_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARGPKDYYDSHMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccaggagaggggctggagtgggtctcaactattagtggtaatggtggtaggacatactacgctgactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcaagaggcccgaaagattactatgatagtcacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2719 2718 M02948:180:000000000-JFBGH:1:2119:2243:14421_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-19*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARRAVAEQYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggcagtggctgaacaatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2720 2719 M02948:180:000000000-JFBGH:1:2119:4921:14547_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARDRGYYDSSGYPYWYFDLW in-frame + tgcagcctcaggattcacctttagcagctatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcaactatcagtagtaatggtggtaacacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtatattactgtgcgagagatcggggttactatgatagtagtggttatccctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2721 2720 M02948:180:000000000-JFBGH:1:2119:11444:14644_1:N unproductive Homsap IGHV1-2*02 F 1068 98.63 216/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt 8 8 X 8.8.X [2.17.38.11] C#NWFDPW out-of-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggcagtggcttactgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 331 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2722 2721 M02948:180:000000000-JFBGH:1:2119:3587:16814_1:N: productive Homsap IGHV1-2*02 F 1014 95.89 210/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-19*01 F 2 8 8 13 8.8.13 [2.17.38.11] CAREAGDYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagaggctggggactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2723 2722 M02948:180:000000000-JFBGH:1:2119:5144:17696_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1001 95.00 209/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-1*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARGTGTTSLPFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaagggactggagtggattgggtatgtctcttacagtgggagcaccaactgcaacccctccctcaagagtcgagtcaccatgtcagtagacacgtccaagaaccagttctccctgaagctgaactctgtgaccgctgcggacacggccgtgtattactgtgcgagggggactggaaccacatcccttccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2724 2723 M02948:180:000000000-JFBGH:1:2119:8711:17711_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD5-18*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARDRSDSYGPYYYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcggagtgacagctatggaccctattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2725 2724 M02948:180:000000000-JFBGH:1:2119:3275:17922_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-3*01 F 3 8 8 9 8.8.9 [2.17.38.11] CAREDGAVGYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggacggagcggttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2726 2725 M02948:180:000000000-JFBGH:1:2119:13722:18477_1:N productive Homsap IGHV4-59*12 (F), or Homsap IGHV4-61*05 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARDVVYDSSGYYLFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagatgtggtttatgatagtagtggttattacttatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2727 2726 M02948:180:000000000-JFBGH:1:2119:18327:19114_1:N No rearrangement found Homsap IGHV1-18*01 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcggggggttatggttcggggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 299 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2728 2727 M02948:180:000000000-JFBGH:1:2119:10029:20318_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD6-6*01 F 2 8 8 22 8.8.22 [2.17.38.11] CARAGIAARPYSRYYYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagccggtatagcagctcgtccctactctcgatattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2729 2728 M02948:180:000000000-JFBGH:1:2119:13055:22010_1:N productive Homsap IGHV1-8*02 F 1050 97.72 214/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD5-12*01 F 1 8 8 11 8.8.11 [2.17.38.11] CARGRMDNWFDPW in-frame + gcttctggatacacgttcaccagctatgatattaattgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggcaatacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggcaggatggataactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2730 2729 M02948:180:000000000-JFBGH:1:2119:7782:22542_1:N: unproductive (see comment) Homsap IGHV1-8*01 F 1077 99.09 217/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD3-3*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARVLRFFTNWFDPW in-frame + rearranged sequence, stop codons gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtcctacgatttttcacgaactggttcgacccctggggctagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2731 2730 M02948:180:000000000-JFBGH:1:2119:12705:22699_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-21*02 F 2 8 8 15 8.8.15 [2.17.38.11] CASFPPRGDDEQTTDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcttccctccaaggggggatgacgagcaaaccactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2732 2731 M02948:180:000000000-JFBGH:1:2119:22098:22906_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-19*01 F 2 8 8 20 8.8.20 [3.17.38.11] CAKDWNLVTVAVAGGSRWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagattggaatttggtaacggtagcagtggctgggggctctcgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2733 2732 M02948:180:000000000-JFBGH:1:2119:8629:23346_1:N: productive Homsap IGHV2-5*02 F, or Homsap IGHV2-5*05 F or Homsap IGHV2-5*09 F 1209 93.12 257/276 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 2 10 7 11 10.7.11 [20.17.38.11] CAHSQLWLPFDYW in-frame + acacagaccctcacgctggtgaagcccacagagaccctcacgctgacctgcaccttctctggattctcactcagcagtaatggaatgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctactgcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtagtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacagccagctatggcttccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 404 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2734 2733 M02948:180:000000000-JFBGH:1:2119:19524:24221_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-19*01 F 3 8 8 25 8.8.25 [2.17.38.11] CARDPEVWVGQWLVRDLDYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaccctgaggtgtgggtcggtcagtggctggtacgtgatctcgactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2735 2734 M02948:180:000000000-JFBGH:1:2119:11048:24856_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-16*02 F 3 8 8 19 8.8.19 [3.17.38.11] CAKDPFMITFGGVIDHKGDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatccttttatgattacgtttgggggagttatcgaccacaagggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2736 2735 M02948:180:000000000-JFBGH:1:2118:17802:1968_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 899 89.24 199/223 nt Homsap IGHJ6*04 F 261 90.48 57/63 nt Homsap IGHD3-10*02 F 3 8 8 20 8.8.20 [3.17.38.11] CARDLASGLFGEMGYYYGMDVW in-frame + ttcagcctctggattcaccttcagtagttatgaaatgaactgtgtccgccaggctccagtgaaggggctggagtttttctcagctataagtgctagtggttgcagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtttttggaaatgagcggcctgagagctgaggacacggctgtgtattactgtgcgagagatctggcctcaggtctgttcggggaaatgggctactactacggtatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2737 2736 M02948:180:000000000-JFBGH:1:2118:10313:4380_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARLAPSGYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactagcgccctcgggctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2738 2737 M02948:180:000000000-JFBGH:1:2118:17711:4591_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARLPPNTVGATTLDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggcttccccctaacacagtgggagctactacccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccatcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2739 2738 M02948:180:000000000-JFBGH:1:2118:24059:4892_1:N: productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-9*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARSFLTGYYKWHAYYYGMDVW in-frame + gcttctggatacaccttcaccggccactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaagcttcttgactggttattataagtggcatgcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2740 2739 M02948:180:000000000-JFBGH:1:2118:14555:5496_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 207 95.56 43/45 nt 8 8 6 8.8.6 [3.17.38.11] CARPFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2741 2740 M02948:180:000000000-JFBGH:1:2118:4219:5709_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-17*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARANGDFVFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcgaacggtgacttcgtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2742 2741 M02948:180:000000000-JFBGH:1:2118:7782:6079_1:N:0 productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-6*01 F 2 8 8 15 8.8.15 [2.17.38.11] CATSPHRIAARPGSDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacgagtccacaccgcatagcagctcgtccaggatccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2743 2742 M02948:180:000000000-JFBGH:1:2118:11578:6808_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD3-16*01 F 1 8 8 17 8.8.17 [3.17.38.11] CARLGLGRPPKYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgggtttgggtcgcccccctaaatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2744 2743 M02948:180:000000000-JFBGH:1:2118:21414:7318_1:N: productive Homsap IGHV5-10-1*04 F 1074 98.20 218/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAREIKYCSGGSCYSGGYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagagatcaaatattgtagtggtggtagctgctactctggtggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2745 2744 M02948:180:000000000-JFBGH:1:2118:10802:9888_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-26*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARDRHSGSYYEVDNWFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcggcatagtgggagctactatgaggtggacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2746 2745 M02948:180:000000000-JFBGH:1:2118:28778:9912_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD1-26*01 F 3 8 7 16 8.7.16 [3.17.38.11] CASATDYRIYYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtatattactgtgcgagtgcgacagactacagaatttactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2747 2746 M02948:180:000000000-JFBGH:1:2118:10351:11124_1:N No rearrangement found Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaaggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 289 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2748 2747 M02948:180:000000000-JFBGH:1:2118:9404:11572_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-8*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARSYCTNGVCSRDAFDIW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgaggtcgtattgtactaatggtgtatgcagtcgtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2749 2748 M02948:180:000000000-JFBGH:1:2118:12118:12197_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD5-12*01 F 3 8 8 12 8.8.12 [3.17.38.11] CAKGGCCGLAQDHW in-frame + tgtagcctctggattcacctttagcagctatgccttgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctatcggtacaagtggaggtgacacatattacgcagactccgtgaagggccggttcaccatatccagagacaattccaagaacacactctatctgcaaatgaacagcctgagagccgaggacacggccctatattactgtgcgaagggcgggtgttgtggcttggctcaggaccactggggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2750 2749 M02948:180:000000000-JFBGH:1:2118:9549:12600_1:N: productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD6-6*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDLAARLRYYYYMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgaggacacggccgtgtattactgtgcgagagatttagcagctcgtcttaggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2751 2750 M02948:180:000000000-JFBGH:1:2118:13659:12671_1:N productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARTGIAAAGTRPLWAPDYW in-frame + gcttctggttatacctttaccagccatggcatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaacgggtatagcagcagctggtacgcgtccactttgggcccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2752 2751 M02948:180:000000000-JFBGH:1:2118:26849:13829_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD2-21*02 F 2 8 8 18 8.8.18 [2.17.38.11] CARDWGDDYGDPPYYYMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggattggggtgacgattatggcgatcctccctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2753 2752 M02948:180:000000000-JFBGH:1:2118:5720:14119_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [3.17.38.11] CVRSAVAGAGWNWYFDLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacacgtccatcagcaccgcctacttgcagtggagcagcctgaaggcctcggacatcgccatgtattactgtgtgaggtctgcagtggctggtgctgggtggaactggtacttcgatctctggggccgtggcaccctggtcagtgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2754 2753 M02948:180:000000000-JFBGH:1:2118:20282:14209_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-15*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARLPRYCSGGSCFPRRDYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*02 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcccccgatattgtagtggtggtagctgcttcccacggcgggactactacatggacgtctggggcaatgggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2755 2754 M02948:180:000000000-JFBGH:1:2118:29266:14434_1:N productive Homsap IGHV4-61*01 F 923 89.82 203/226 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-3*01 F 2 10 7 18 10.7.18 [3.17.38.11] CARGSWSGYYGEGSAWFDPW in-frame + tactgtctctggtggctccgtcagcagtggtagttcctactggagctggatccggcagcccccagggaagggactggagtggattggtcacatccgtcacagtgagagtagcaactacaacccctccctcaagagtcgagtcaccatttcatctgacacgtccaaaaaccagttttccctgaggctgaggtcaatcaccgctgcggacacggccgtatattactgtgcgcgaggatcttggagtggttattatggggaagggagtgcctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2756 2755 M02948:180:000000000-JFBGH:1:2118:18379:14947_1:N productive Homsap IGHV3-11*01 F (see comment) 572 83.44 136/163 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-22*01 F 2 X 8 20 X.8.20 [X.8.38.11] CARDRDYYDSSADIRYNWFDPW in-frame + low V-REGION identity (83.44%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release ctatgcgccttgccagcccgctcagcatagtagtgatgggaataccataaactacgcagattctgtgaagggccgattcaccgtctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatcgggattactatgatagtagtgccgatatccggtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 287 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2757 2756 M02948:180:000000000-JFBGH:1:2118:23169:15069_1:N productive (see comment) Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1110 100.00 222/222 nt 99.55 221/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*02 F 2 8 7 16 8.7.16 [3.17.38.11] CARDSCSSTSCYTFFGYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 64 of V-REGION: 1 nucleotides (from position 105 in the user submitted sequence), (cause frameshift) tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatagttgtagtagtaccagctgctatactttctttgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2758 2757 M02948:180:000000000-JFBGH:1:2118:24749:17186_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 989 93.72 209/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-21*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKDDHYLYYYYMDVW in-frame + tgcagcgtctggattcagattcagtagctatggcatgcactgggtccgccaggctccaggcagggggctggagtgggtggcaattatatggttcgatggaagttacaaatactatggagactccgtgaagggccgattcaccatctccagagacaattacaagaatacgctgtatcttcaaatgaacagcctgggagccgaggacacggctgtatattactgtgcgaaagatgatcactatctctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2759 2758 M02948:180:000000000-JFBGH:1:2118:11559:18105_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*04 F (see comment) 171 74.60 47/63 nt Homsap IGHD1-20*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARLLYITGSMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcctttatataactgggagtatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2760 2759 M02948:180:000000000-JFBGH:1:2118:21527:18308_1:N unproductive (see comment) Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-24*01 ORF 3 8 8 X 8.8.X [3.17.38.11] CARDQVGRWLQP#YYFDYW out-of-frame + rearranged sequence, stop codons tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcaggtgggtcggtggctacaacccttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2761 2760 M02948:180:000000000-JFBGH:1:2118:25938:18556_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-21*02 F 3 8 7 11 8.7.11 [3.17.38.11] CATRGGTGIVDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaccagaggggggactgggatcgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttctccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2762 2761 M02948:180:000000000-JFBGH:1:2118:14225:18844_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1032 96.80 212/219 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD6-25*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARGGYGTEGYYYMDVW in-frame + gcatctggatacaccttcaccagctactatatgtactgggtgcgacaggcccctgaacaaaggcttgagtggatgggagtaatcaaccctagtggtggtagcacaagctacgcacagaagttccaggccagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcaacctgagatctgacgacacggccgtgtattactgtgcgagaggcggctacggcacagaaggctactattacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2763 2762 M02948:180:000000000-JFBGH:1:2118:13809:18984_1:N productive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1090 100.00 218/218 nt 99.54 217/218 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD4-23*01 ORF 3 8 7 14 8.7.14 [2.17.38.11] CAATVVNVYYYYMDVW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 65 of V-REGION: 1 nucleotides (from position 105 in the user submitted sequence), (cause frameshift) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggctacggtggtaaatgtatactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 355 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2764 2763 M02948:180:000000000-JFBGH:1:2118:11354:20210_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 975 93.24 207/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARVSSGWLDFDYW in-frame + ccagcctctggattcaccttcagtagtcacttgatgcactgggtccgccaaactccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagttagcagtggctggttagactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2765 2764 M02948:180:000000000-JFBGH:1:2118:10473:20855_1:N productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-12*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDKGGYSGYDQFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtggagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcagatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagataagggtggatatagtggctacgatcaatttgactactggggccagggaaccctggtcaccgcctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2766 2765 M02948:180:000000000-JFBGH:1:2118:13737:20973_1:N unproductive (see comment) Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 8 8 X 8.8.X [2.17.38.11] CARG*NIVVVPAAM#FDYW out-of-frame + rearranged sequence, stop codons gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagggtaaaatattgtagtagtaccagctgctatgtgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2767 2766 M02948:180:000000000-JFBGH:1:2118:9577:22637_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1059 98.17 215/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-12*01 F 1 8 8 14 8.8.14 [2.17.38.11] CEVATIGDYYYGMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgaagtggctacgattggggactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2768 2767 M02948:180:000000000-JFBGH:1:2118:10471:23519_1:N productive Homsap IGHV3-33*07 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARGDYCTSTSCPYPYYFDYW in-frame + tgcagcgtctggattcaccttcagtatgtatggcatgaactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtttgatggaagtaataagtactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggggattattgtactagtaccagctgcccatatccctactactttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2769 2768 M02948:180:000000000-JFBGH:1:2118:21122:24099_1:N productive Homsap IGHV1-2*02 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARDRPGIVGATVPFADYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcgccctgggatagtgggagctaccgttccctttgctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2770 2769 M02948:180:000000000-JFBGH:1:2118:16780:24344_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*01 F 2 8 7 9 8.7.9 [3.17.38.11] CARGKGGVDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaggcaagggtggcgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2771 2770 M02948:184:000000000-JK6TB:1:1102:12680:2337_1:N: productive (see comment) Homsap IGHV4-61*01 F, or Homsap IGHV4-61*08 F 1123 94.76 235/248 nt 94.35 234/248 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-24*01 ORF 3 9 7 23 9.7.23 [11.17.38.11] CAKVEGYDKMLDLPGESYYYGMDVW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 36 of V-REGION: 3 nucleotides (from position 57 in the user submitted sequence), (do not cause frameshift) ctgcggggaccctggcccgcaccggcgcggtctctggttactccatcagcagtggttactactgcggctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgcgcgaaggttgagggctacgataagatgcttgacctcccaggtgaaagctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2772 2771 M02948:184:000000000-JK6TB:1:1102:7058:3795_1:N:0 productive Homsap IGHV3-11*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-19*01 F 3 8 8 21 8.8.21 [3.17.38.11] CAREGQWLVRGRGYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagaggggcagtggctggtaagggggaggggatactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2773 2772 M02948:184:000000000-JK6TB:1:1102:19710:5040_1:N: unproductive (see comment) Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F 102 66.67 34/51 nt 8 8 X 8.8.X [2.17.38.11] CARDLVVE*W (see V-DOMAIN Functionality comment) out-of-frame + rearranged sequence, stop codons; IMGT/JunctionAnalysis gives no results for this JUNCTION gcttctggttacacctttaccagctatggtatcagctgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatctagtggtggagtagtggaaggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 340 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2774 2773 M02948:184:000000000-JK6TB:1:1102:21060:5639_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-1*01 F 3 8 8 8 8.8.8 [2.17.38.11] CARGWKSDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggctggaaatccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2775 2774 M02948:184:000000000-JK6TB:1:1102:4990:6348_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-12*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARRTGSGGADYW in-frame + ggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaaggacgggatcaggtggggctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2776 2775 M02948:184:000000000-JK6TB:1:1102:23083:6412_1:N: productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1115 100.00 223/223 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-10*01 F 3 9 7 16 9.7.16 [3.17.38.11] CARAHSMVRGTLYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagctcactctatggttcggggaacactgtacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatctgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2777 2776 M02948:184:000000000-JK6TB:1:1102:17395:7050_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-16*02 F 1 8 8 15 8.8.15 [3.17.38.11] CARLFGLGELSSVFDYW in-frame + cagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagattatttggtttgggggagttatcgtccgtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2778 2777 M02948:184:000000000-JK6TB:1:1102:6726:7512_1:N:0 productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-6*01 F 1 8 7 12 8.7.12 [3.17.38.11] CARGGSSAYYFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggtggctcgtccgcatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2779 2778 M02948:184:000000000-JK6TB:1:1102:18534:8079_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-24*01 ORF 1 8 8 18 8.8.18 [3.17.38.11] CARSVEMATSRMGGYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggagtgtagagatggctacatcccggatgggcgggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2780 2779 M02948:184:000000000-JK6TB:1:1102:8975:9272_1:N:0 productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-9*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDGYDILTGYYLPSDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgggtatgatattttgactggttattatctcccgtcggactactggggccagggaaccctggtcaccgtctcctcggggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2781 2780 M02948:184:000000000-JK6TB:1:1102:13274:9526_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-6*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARRPLLDDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgagacggcccctccttgatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2782 2781 M02948:184:000000000-JK6TB:1:1102:2162:9983_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1014 95.89 210/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*02 F 3 8 8 22 8.8.22 [2.17.38.11] CARGGDIVVVPAAIPNYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaggggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagggggggatattgtagtagtaccagctgctatacccaactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2783 2782 M02948:184:000000000-JK6TB:1:1102:9962:10178_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1168 96.77 240/248 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD1-14*01 ORF 3 8 8 17 8.8.17 [11.17.38.11] CAKNPAQHHYYYYYYMDVW in-frame + ctggtgggtcccagagactcccctgtgcagcctctggattcacctttagcagctatgccattagctgggtccgccaggctcacgggtgggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaacccggcccaacaccattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2784 2783 M02948:184:000000000-JK6TB:1:1102:11966:10535_1:N productive Homsap IGHV3-48*02 F 1079 98.21 219/223 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKSRVVPAARYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtatctgcaaatgaacagcctgagagacgaggacacggccgtatattactgtgcgaaaagcagggtagtaccagctgcgcgatacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2785 2784 M02948:184:000000000-JK6TB:1:1102:9716:10596_1:N: unproductive (see comment) Homsap IGHV4-31*01 F 1004 93.81 212/226 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 2 10 7 X 10.7.X [3.17.38.11] CARVTTIFGVVSTGM#YHYGMDVW out-of-frame + rearranged sequence, stop codons cagtgtctcaggtgcctccatcagcagtggtggtcacttctggagctggatccgccagcacccagggaagggcctggagtggattgggtacattcattacagtgggagcacctgctacaagccgtccctcaagagtctagttaccatttcagtagacacgtctaagaatcagttctccctgaaactgagctctgtgactgctgcggacacggccgtgtattaatgtgcgagagtcactacgatttttggagtggttagtacgggtatgactaccactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2786 2785 M02948:184:000000000-JK6TB:1:1102:17339:11002_1:N productive Homsap IGHV3-30*04 F, or Homsap IGHV3-30-3*03 F 944 91.48 204/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARGDGPGSWLIDFW in-frame + tgcagcctctgggttcagtttcagtagttatgccatacactgggtccgcctggctccaggcaagggactggagtgggtggctctcatgtcacacgatggaagtaataaaaactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagagcacgctgtatctgcaaatggacagcctgcgagctgaggacacggctgtgtattattgtgcgagaggtgatggtccggggagttggctgattgacttctggggccagggaaccctggtcaccgtctcgtcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2787 2786 M02948:184:000000000-JK6TB:1:1102:14415:11309_1:N productive Homsap IGHV3-48*03 F 1034 95.96 214/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-16*02 F 3 8 8 11 8.8.11 [3.17.38.11] CAYRGVTGAFDIW in-frame + tgcagcctctggattcacctttagcaactatctgatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaagtgaacagcctgagagccgaggacacggctgtttattactgtgcctaccggggggttaccggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2788 2787 M02948:184:000000000-JK6TB:1:1102:26413:11539_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKVVGLGGSSGYTEDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggtcggtttgggtggtagtagtggttatactgaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2789 2788 M02948:184:000000000-JK6TB:1:1102:5172:11939_1:N: productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD2-2*02 F 2 8 8 24 8.8.24 [3.17.38.11] CARAPYCSSTSCYKRNYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagggccccgtattgtagtagtaccagctgctataaaaggaactactactactactacggtatggacgtctggggccaagggatcacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 390 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2790 2789 M02948:184:000000000-JK6TB:1:1102:6644:12047_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*01 F 3 8 8 9 8.8.9 [2.17.38.11] CARGLEYPDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcctggagtatcccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2791 2790 M02948:184:000000000-JK6TB:1:1102:5771:13161_1:N: No rearrangement found Homsap IGHV3-48*03 F 1097 99.10 221/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagccgagactacggtgagaattcccctcgcgatat 0 0 263 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2792 2791 M02948:184:000000000-JK6TB:1:1102:20491:13648_1:N productive Homsap IGHV2-5*02 F 1236 99.60 248/249 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-16*02 F 3 10 7 19 10.7.19 [11.17.38.11] CAHSGKKITFGGVIVNGFDYW in-frame + acacagcccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacactccgggaagaagattacgtttgggggagttatcgttaatggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagacctcgcgatat 0 0 396 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2793 2792 M02948:184:000000000-JK6TB:1:1102:11716:13839_1:N productive Homsap IGHV1-8*01 F 987 94.52 207/219 nt Homsap IGHJ6*02 F 193 79.03 49/62 nt Homsap IGHD6-13*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARGRGVPATGSFYQGLGVW in-frame + gcttctggatacaccttcggcacttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatggcatggatgaaccctaacagtggtaacacaggctttgcacagaaattccagggcagagtcaccttgaccagggacacctccataaatacagtctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgagaggccggggtgttccagcaactggtagtttttaccagggtctgggcgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaagccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2794 2793 M02948:184:000000000-JK6TB:1:1102:16376:14414_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD2-15*01 F 2 8 8 26 8.8.26 [2.17.38.11] CARDRRYCSGGSCYQPPYYYYYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcggcgatattgtagtggtggtagctgctaccaacctccctattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 392 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2795 2794 M02948:184:000000000-JK6TB:1:1102:3224:16261_1:N: unproductive (see comment) Homsap IGHV4-59*11 F 461 86.78 105/121 nt 85.95 104/121 nt Homsap IGHJ4*02 F (see comment) 195 89.58 43/48 nt Homsap IGHD3-16*02 F 2 8 3 13 8.3.13 [3.17.9.11] CARHLDWGDYPLDSW in-frame + rearranged sequence, stop codons other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) in CDR2-IMGT, from codon 59 of V-REGION: 99 nucleotides (from position 95 in the user submitted sequence), (do not cause frameshift) cactgtctctggtgcctccatcatgaatcagtactagagttggatccggcagtccccagggaagggactggagtggattgcatatacccattatactgcggactcggccatgtattactgtgcgagacatttggattggggggattatccccttgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 255 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2796 2795 M02948:184:000000000-JK6TB:1:1102:20536:16850_1:N productive Homsap IGHV1-18*04 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD5-12*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARGVGSGYDYFDYW in-frame + gcttctggttacacctttaccagctacggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagaggggtgggtagtggctacgattactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2797 2796 M02948:184:000000000-JK6TB:1:1102:4891:16853_1:N: productive Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAREVHSSTTRGSFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatatattagtagtagtggtagtaccagatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcattgtatctgcaaatgaacagcctgggagccgaggacacggctgtttattactgtgcgagagaagtacatagtagtaccacccgcgggtcttttgactactggggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2798 2797 M02948:184:000000000-JK6TB:1:1102:27132:17381_1:N productive Homsap IGHV3-48*04 F 1052 96.86 216/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD1-26*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARAGIVSYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaaggactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagctgggatagtgagctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2799 2798 M02948:184:000000000-JK6TB:1:1102:9673:17973_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-23*01 ORF 2 8 8 14 8.8.14 [3.17.38.11] CASMNDYRGYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcttccatgaatgactaccggggctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2800 2799 M02948:184:000000000-JK6TB:1:1102:22270:18206_1:N productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDRFLEWFFDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatcgatttttggagtggttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2801 2800 M02948:184:000000000-JK6TB:1:1102:4011:18330_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-26*01 F 1 8 8 17 8.8.17 [2.17.38.11] CAISGIVGATVDDGAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgatctccggtatagtgggagctactgtggacgacggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2802 2801 M02948:184:000000000-JK6TB:1:1102:8254:18596_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 2 8 8 12 8.8.12 [3.17.38.11] CATLGRSSGTIDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaagacctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaacatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgacactagggcgtagtagtggtactattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2803 2802 M02948:184:000000000-JK6TB:1:1102:10728:18752_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 969 93.61 205/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-21*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARDPNWGLVFRDAFDIW in-frame + gcttctggttacacctttatcagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacctccataagcacagtctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagagaccccaactggggattggtgtttcgagatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2804 2803 M02948:184:000000000-JK6TB:1:1102:18936:19182_1:N unproductive (see comment) Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 810 100.00 162/162 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-2*01 F 3 X 8 19 X.8.19 [X.8.38.11] CARD*FIVVVPAAIDAWFDPW in-frame + rearranged sequence, stop codons caagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagactgatttattgtagtagtaccagctgctattgatgcctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 283 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2805 2804 M02948:184:000000000-JK6TB:1:1102:26984:19381_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARDGSYFIKGEDYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgagagatgggagctacttcattaagggggaggactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2806 2805 M02948:184:000000000-JK6TB:1:1102:12481:19613_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARSSHWELLFDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatcctcacactgggagctactttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2807 2806 M02948:184:000000000-JK6TB:1:1102:8104:19845_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 3 8 8 17 8.8.17 [2.17.38.11] CASTIFSRTIYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcacaattttctctcgcacgatatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctccgcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2808 2807 M02948:184:000000000-JK6TB:1:1102:20619:20488_1:N productive (see comment) Homsap IGHV1-3*01 F, or Homsap IGHV1-3*04 (F) or Homsap IGHV1-3*05 F 705 100.00 141/141 nt 99.29 140/141 nt Homsap IGHJ5*02 F 156 78.43 40/51 nt Homsap IGHD6-19*01 F 1 8 X 10 8.X.10 [2.3.34.11] CARDLGSGWSAW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 42 of V-REGION: 78 nucleotides (from position 40 in the user submitted sequence), (do not cause frameshift) gcttctggatacaccttcactagctatgctatgcattggaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatctcggcagtggctggtcggcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 266 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2809 2808 M02948:184:000000000-JK6TB:1:1102:19278:20692_1:N productive Homsap IGHV4-61*01 F 1067 96.90 219/226 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 10 7 10 10.7.10 [3.17.38.11] CARRDWGALDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaagggactggggtgcccttgactactggggccagggaaccctagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2810 2809 M02948:184:000000000-JK6TB:1:1102:17051:20702_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 776 93.71 164/175 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 1 X 8 21 X.8.21 [X.12.38.11] CAKSEGLWFGELLYSGVGAFDYW in-frame + ccaggctccagggaaggggctggagtgggtctcaagtattagtggtattgatggtgccacatactacgcagactccgtgaagggccgcttcaccatctccagagacaattccaagaacacgatgtatctgcacatgaacagcctgagagccgaggacacggccaaatattactgtgcgaaaagcgaaggactatggttcggggaattattatattctggtgtcggtgcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 302 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2811 2810 M02948:184:000000000-JK6TB:1:1102:20906:20744_1:N productive (see comment) Homsap IGHV3-23*03 F, or Homsap IGHV3-23*05 F 1055 97.73 215/220 nt 97.27 214/220 nt Homsap IGHJ4*02 F 96 66.67 32/48 nt Homsap IGHD2-2*01 F 3 8 7 18 8.7.18 [3.17.38.11] CARQSPMVVPAAMAYYFDYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 63 of V-REGION: 3 nucleotides (from position 101 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagctgtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagacagtccccgatggtagtaccagctgcgatggcctactactttgactactggggccagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2812 2811 M02948:184:000000000-JK6TB:1:1102:7372:20892_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD2-21*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARQPGCGGDCYLYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacaaccggggtgtggtggtgattgctatctctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2813 2812 M02948:184:000000000-JK6TB:1:1102:9363:21121_1:N: productive Homsap IGHV1-18*01 F 1050 97.72 214/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD6-13*01 F 2 8 8 12 8.8.12 [2.17.38.11] CATLRGGAAAGLYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatgggtcagcgcttacaatggtgacacaaactatgcacagaaattccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcaacgttaaggggaggagcagcagctggtttatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2814 2813 M02948:184:000000000-JK6TB:1:1102:9659:21460_1:N: productive Homsap IGHV4-38-2*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-24*01 ORF 2 9 7 22 9.7.22 [3.17.38.11] CARGSIGWLQYGFGVGQPEIFDYW in-frame + cgctgtctctggttactccatcaccagtggttactactggggctggatccggcagcccccagggaaggggctgcagtggattgggagtatctatcatagtgggagcacctactacagcccgtccctcaggggtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggaagcattggatggctacaatacggttttggagtaggccaaccagaaatctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2815 2814 M02948:184:000000000-JK6TB:1:1102:25119:22426_1:N productive Homsap IGHV1-8*01 F 1077 99.09 217/219 nt Homsap IGHJ6*03 F 214 84.75 50/59 nt Homsap IGHD3-10*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARDHWGDYMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatcattggggagactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2816 2815 M02948:184:000000000-JK6TB:1:1102:24044:23095_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARLGEGYSGSWDPFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactaggggaggggtatagtgggagctgggacccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2817 2816 M02948:184:000000000-JK6TB:1:1102:22560:23744_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARVHGDYVDWYFDLW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtccacggtgactacgtggactggtacttcgatctctggggccgtgacaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2818 2817 M02948:184:000000000-JK6TB:1:1101:5358:4080_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-9*01 F 2 8 8 21 8.8.21 [3.17.38.11] CAKVSPKNYDILTGYQSYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtttccccgaagaattacgatattttgactggttatcaatcgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2819 2818 M02948:184:000000000-JK6TB:1:1101:8678:5263_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARDNSSGFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagataacagtagtgggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcttctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2820 2819 M02948:184:000000000-JK6TB:1:1101:10892:6372_1:N: productive Homsap IGHV3-48*03 F 1051 99.53 211/212 nt Homsap IGHJ5*02 F 156 78.43 40/51 nt Homsap IGHD4-17*01 F 2 7 8 10 7.8.10 [X.17.38.11] CARPDYGSGVRW in-frame + gattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaggcccgactacggttcgggtgtacgctggggccagggaaccctggtcaccgtcttctcagggagtgcatccgccccaacccttttccccc 0 0 306 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2821 2820 M02948:184:000000000-JK6TB:1:1101:9467:6496_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD1-1*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKDLGRYYYYMDVW in-frame + tgcagtctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatctgggacggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2822 2821 M02948:184:000000000-JK6TB:1:1101:26744:6820_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 624 90.67 136/150 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD3-10*01 F 2 X 8 13 X.8.13 [X.4.38.11] CATGYGSGSYPKKFW in-frame + atatcgcgagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaggctatggttcggggagttatcctaaaaagttttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 253 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2823 2822 M02948:184:000000000-JK6TB:1:1101:7074:7095_1:N:0 productive Homsap IGHV4-34*08 F 893 89.55 197/220 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-2*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARGGHHCSSTSCYGWFDPW in-frame + tgccgcctctggattcacgttcagcagttttgaaatgaactgggtccgccaggctccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggggggcaccattgtagtagtaccagctgctatggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2824 2823 M02948:184:000000000-JK6TB:1:1101:19884:7264_1:N: productive Homsap IGHV3-11*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-7*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARDPLGLRGPSLDYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagaccctctgggactacgtgggccctctcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2825 2824 M02948:184:000000000-JK6TB:1:1101:11788:9728_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKDSKGFYYAFNWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagattcaaaaggcttttattacgccttcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgacccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2826 2825 M02948:184:000000000-JK6TB:1:1101:18615:11251_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARGDLIAAAGRGGYYYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggggacctaatagcagcagctggacgagggggctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2827 2826 M02948:184:000000000-JK6TB:1:1101:9046:12335_1:N: productive Homsap IGHV3-48*03 F, or Homsap IGHV3-48*04 F 1043 96.41 215/223 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD5-24*01 ORF 1 8 8 20 8.8.20 [3.17.38.11] CARNIKVTTPEYYYYYYGMDVW in-frame + tgtagcctctggattcacctttagtacctattggatgtactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaaacataaaggtgactacgcccgagtattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2828 2827 M02948:184:000000000-JK6TB:1:1101:26217:12607_1:N productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 8 8 9 8.8.9 [2.17.38.11] CARAYSFFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggaactgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcctatagcttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2829 2828 M02948:184:000000000-JK6TB:1:1101:17921:13185_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-15*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARPRGVGRVYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccccgaggggtggggagggtctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2830 2829 M02948:184:000000000-JK6TB:1:1101:10999:14097_1:N productive Homsap IGHV3-21*07 (F) 971 92.83 207/223 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD6-19*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKVVTVAEPSRFDPW in-frame + tgcagcctctggattcaccttcagtagttactggatgcactgggtccgccaagttccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctatctattactgtgcgaaagtagtaacagtggctgaaccctctcggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2831 2830 M02948:184:000000000-JK6TB:1:1101:19330:14898_1:N productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1114 98.26 226/230 nt Homsap IGHJ6*02 F 266 98.18 54/55 nt 10 9 10 10.9.10 [2.17.38.11] CARDYYYGMDVW in-frame + ccatctccggggacagtgtctctagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggttgggaaggacatactacaggtccaagtggtataatgaatatgcactatctgtgaaaagtcgaataatcatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagagattactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 355 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2832 2831 M02948:184:000000000-JK6TB:1:1101:4074:15910_1:N: productive Homsap IGHV3-30*03 F, or Homsap IGHV3-30*18 F or Homsap IGHV3-30-5*01 F or Homsap IGHV3-33*05 F 1061 97.31 217/223 nt Homsap IGHJ6*03 F 214 84.75 50/59 nt Homsap IGHD2-15*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARVDGSYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagttgatgggagctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2833 2832 M02948:184:000000000-JK6TB:1:1101:15667:16556_1:N productive Homsap IGHV3-30*07 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-21*01 F 2 8 8 7 8.8.7 [3.17.38.11] CARVDWNYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtagattggaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2834 2833 M02948:184:000000000-JK6TB:1:1101:26494:16589_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1037 96.82 213/220 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD1-26*01 F 2 8 7 16 8.7.16 [3.17.38.11] CAKDQWELRYYYYGMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaatatgctgcatctccaaatgagcagcctgagagccgaggacacggccgtatactactgtgcgaaagatcagtgggagctacgatactattattacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2835 2834 M02948:184:000000000-JK6TB:1:1101:2673:17443_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD5-18*01 F 2 8 8 8 8.8.8 [2.17.38.11] CARGIWFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagggatctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcccccgcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2836 2835 M02948:184:000000000-JK6TB:1:1101:10892:17810_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 9 8.8.9 [2.17.38.11] CARDSGEFDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagacagtggggaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2837 2836 M02948:184:000000000-JK6TB:1:1101:20838:18663_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD6-6*01 F 2 10 7 18 10.7.18 [3.17.38.11] CARGQVVGSIAAPYYGMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggcaggttgtgggaagtatagcagctccgtactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2838 2837 M02948:184:000000000-JK6TB:1:1101:21679:18749_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-23*01 ORF 3 8 8 15 8.8.15 [3.17.38.11] CARDTGDPNGWYYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatacgggggatcccaacggatggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2839 2838 M02948:184:000000000-JK6TB:1:1101:20582:18813_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 7 11 8.7.11 [3.17.38.11] CARMHYDDAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaatgcactatgatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2840 2839 M02948:184:000000000-JK6TB:1:1101:8632:19775_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 962 92.38 206/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARDLGYYDSSGYHDYW in-frame + tgcagcctctggattcacctctaacaactatgccatcacctggttccgccaggctccagggaaggggctggagtgggtctcaggtattagtagtggtggcaccaggacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatttggggtactatgatagtagtggttatcatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2841 2840 M02948:184:000000000-JK6TB:1:1101:22727:20404_1:N productive (see comment) Homsap IGHV1-2*02 F, or Homsap IGHV1-2*06 F or Homsap IGHV1-8*01 F (see comment) 884 95.34 184/193 nt 94.82 183/193 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 3 8 4 20 8.4.20 [2.12.38.11] CARGLRVPRIGRGQYYYYMDVW in-frame + potentially, because of detected insertion/deletion the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (4 AA in M02948:184:000000000-JK6TB:1:1101:22727:20404_1:N; 8 AA in Homsap IGHV1-2*02): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release in FR2-IMGT, from codon 51 of V-REGION: 26 nucleotides (from position 68 in the user submitted sequence), (cause frameshift) gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggttgcgggtcccgaggataggacggggccagtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2842 2841 M02948:184:000000000-JK6TB:1:1101:14209:20809_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD4-17*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARRVSGDYGAYWYFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagagtctccggtgactacggagcctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2843 2842 M02948:184:000000000-JK6TB:1:1101:20267:21861_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARAPYCSSTSCLGDAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagccccgtattgtagtagtaccagctgcttaggggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2844 2843 M02948:184:000000000-JK6TB:1:1101:7215:22147_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-18*01 F 3 8 8 14 8.8.14 [2.17.38.11] CASRRYSYGYNYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtaggagatacagctatggttataactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2845 2844 M02948:184:000000000-JK6TB:1:1101:24291:22791_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-19*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARPLSSGWYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacctcttagcagtggctggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2846 2845 M02948:184:000000000-JK6TB:1:1101:15853:23902_1:N productive (see comment) Homsap IGHV1-3*01 F, or Homsap IGHV1-3*04 (F) or Homsap IGHV1-3*05 F 705 100.00 141/141 nt 99.29 140/141 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-15*01 F 3 8 X 19 8.X.19 [2.3.34.11] CARDGEPGVVVNYYYYYMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 42 of V-REGION: 78 nucleotides (from position 40 in the user submitted sequence), (do not cause frameshift) gcttctggatacaccttcactagctatgctatgcattggaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatggggagcctggagtggtggtgaattattactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 293 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2847 2846 M02948:184:000000000-JK6TB:1:2115:7883:2081_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-24*01 ORF 2 8 8 17 8.8.17 [2.17.38.11] CARAQTLTRWLQLGYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcccagaccctcacgagatggctacaattgggctactttgactactggggcaagggaaccctggtcaccgtctcatcagggagtgcatccgccccaacccttttacccctcgtctcctgtgagaattcacctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2848 2847 M02948:184:000000000-JK6TB:1:2115:22645:3386_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-8*02 F 3 8 8 19 8.8.19 [3.17.38.11] CARQGLRMDVPVYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaggggcttaggatggatgtaccggtctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2849 2848 M02948:184:000000000-JK6TB:1:2115:23624:3612_1:N: productive Homsap IGHV1-69*13 F 1157 97.13 237/244 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 8 8 11 8.8.11 [10.17.38.11] CARRYSGSYFDYW in-frame + tgcctcagtgaagttctactgcagggcttctggaggcaccttcagcagctatgatatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagttgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaggtatagtgggagctacttcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2850 2849 M02948:184:000000000-JK6TB:1:2115:18118:4492_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1023 96.35 211/219 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD3-16*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARERGQNYYYMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaacgggggcagaactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2851 2850 M02948:184:000000000-JK6TB:1:2115:6699:4520_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-21*01 F 1 8 8 9 8.8.9 [3.17.38.11] CARVSGWKVDW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcatatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagtgtcgggctggaaggtggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2852 2851 M02948:184:000000000-JK6TB:1:2115:25026:4696_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-6*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARRNSSSSFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgaaatagcagctcgtcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2853 2852 M02948:184:000000000-JK6TB:1:2115:20320:4902_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*14 F 1103 94.67 231/244 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [10.17.38.11] CARAEGIVGASDYW in-frame + aggctcaatgaagttctcctgcaaggcttctgtaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagcagagggtatagtgggagctagtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2854 2853 M02948:184:000000000-JK6TB:1:2115:24825:5652_1:N: productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1114 98.26 226/230 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD2-15*01 F 2 10 9 17 10.9.17 [2.17.38.11] CAREYCSGGSCFAGWFDPW in-frame + ccatctccggggacagtgtctctagcaacagtgctgcttggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataataattatgcactatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccacttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattattgtgcaagagagtattgtagtggtggtagctgctttgcgggttggttcgacccctggggtcagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 376 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2855 2854 M02948:184:000000000-JK6TB:1:2115:6677:5722_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1028 96.36 212/220 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-26*01 F 3 8 7 16 8.7.16 [3.17.38.11] CARDDSGSWGYYNGMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgatagtgggagctggggttactacaacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2856 2855 M02948:184:000000000-JK6TB:1:2115:14321:5808_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD5-12*01 F 3 8 8 22 8.8.22 [2.17.38.11] CARDGMYSGYDSRSYYYYYYMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagacggaatgtatagtggctacgattcccgaagttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2857 2856 M02948:184:000000000-JK6TB:1:2115:18557:6533_1:N: unproductive Homsap IGHV4-59*08 F 1055 97.73 215/220 nt Homsap IGHJ6*03 F 211 82.26 51/62 nt Homsap IGHD3-10*01 F 1 8 7 X 8.7.X [3.17.38.11] CARGGSY#**YMDVW out-of-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaatgggatctcactgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagaggggggagctattgtagtagtacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2858 2857 M02948:184:000000000-JK6TB:1:2115:22362:6550_1:N: productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARGRIAYYYDSSGAFEIW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagaggcaggattgcgtattactatgatagtagtggcgcttttgaaatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2859 2858 M02948:184:000000000-JK6TB:1:2115:8981:7030_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD6-19*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARERPEVAVAGTDDWYFDLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagagcggccggaagtggcagtggctggaacagacgactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2860 2859 M02948:184:000000000-JK6TB:1:2115:22121:7811_1:N: productive (see comment) Homsap IGHV3-23*03 F 1082 99.09 218/220 nt 98.64 217/220 nt Homsap IGHJ4*03 F 141 77.08 37/48 nt Homsap IGHD6-13*01 F 2 8 7 9 8.7.9 [3.17.38.11] CARDATAAGYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 63 of V-REGION: 3 nucleotides (from position 101 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactatgcagactccgtgaagggccggttcaccatctccagagataattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgcaacagcagctggttactggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccccctcgcgatat 0 0 343 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2861 2860 M02948:184:000000000-JK6TB:1:2115:28372:8013_1:N: productive Homsap IGHV1-8*02 F 1041 97.26 213/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD2-2*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARKLPRINYYYYYGMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaagctcccacgcatcaattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2862 2861 M02948:184:000000000-JK6TB:1:2115:10246:8387_1:N: productive Homsap IGHV4-34*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-16*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARVGEGAFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagtaggtgagggagcgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2863 2862 M02948:184:000000000-JK6TB:1:2115:25548:8676_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ6*03 F 202 86.79 46/53 nt Homsap IGHD1-1*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARVKGYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtgaaaggatacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2864 2863 M02948:184:000000000-JK6TB:1:2115:8446:10140_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F or Homsap IGHV1-69*17 F 776 93.71 164/175 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*02 F 2 X 8 13 X.8.13 [X.12.38.11] CARFRSYDTAYFDYW in-frame + acaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatttcggagctacgataccgcttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacctttttccccc 0 0 278 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2865 2864 M02948:184:000000000-JK6TB:1:2115:11892:11556_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD1-20*01 F 1 8 8 16 8.8.16 [2.17.38.11] CASFITGTRDYYYYMDVW in-frame + gcttctggatacaccttcactagctatgctatacattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagttttataactggaacccgtgactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2866 2865 M02948:184:000000000-JK6TB:1:2115:13401:12275_1:N unproductive (see comment) Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 942 92.24 202/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 X 8.8.X [2.17.38.11] CATLVEVLL*Q*WLLAGGRTR#YFDCW out-of-frame + rearranged sequence, stop codons gcatctggatataccttcaccaattattatattcactgggtgcgacaggcccctgcacaagggcttgagtggatgggaataatcaaccctagtgatgaaactacaacctacgcacagaagttccaggacagagtcaccatgaccagggacacatccacgagcacagtctacatgcagctgagcagcctgagatctgaggacacggccgtctattagtgtgcaacactcgtcgaagtattactatgacagtagtggttattggctggaggaaggactagattactttgactgctggggccagggaaccctggtcatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2867 2866 M02948:184:000000000-JK6TB:1:2115:8491:12382_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 1 8 7 16 8.7.16 [3.17.38.11] CARSAAGFGGLQPEFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattggctatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctccgtgaccgctgcggacacggccgtgtattactgtgcgagaagcgccgcggggttcgggggactccaacctgaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2868 2867 M02948:184:000000000-JK6TB:1:2115:17861:12805_1:N productive Homsap IGHV1-24*01 F 924 91.32 200/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-22*01 F 2 8 8 21 8.8.21 [2.17.38.11] CATDIPDQITSYYDSRNYGMDVW in-frame + gcttctggttacacctttagcagctatggtatcagttgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagatatcccagaccaaatcacgagttactatgatagcagaaactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2869 2868 M02948:184:000000000-JK6TB:1:2115:28411:13351_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 2 8 8 14 8.8.14 [2.17.38.11] CVRVAWELPGNYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgtgagagttgcgtgggagctcccggggaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2870 2869 M02948:184:000000000-JK6TB:1:2115:25201:13633_1:N productive Homsap IGHV1-18*04 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARDRNGLGGSYDYRFGYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcggaacggtctcggtgggagctacgactaccgatttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2871 2870 M02948:184:000000000-JK6TB:1:2115:5609:14179_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARDGGSMVRGVIPLDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatggggggagtatggttcggggagttattccgcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2872 2871 M02948:184:000000000-JK6TB:1:2115:18974:14914_1:N productive Homsap IGHV3-7*03 F 1087 99.10 219/221 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-16*01 F 2 8 8 17 8.8.17 [2.17.38.11] CAKDWGSSPNYYYYGMDVW in-frame + cagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagattggggcagctcacccaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2873 2872 M02948:184:000000000-JK6TB:1:2115:19175:14978_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 890 100.00 178/178 nt Homsap IGHJ6*02 F 251 90.16 55/61 nt Homsap IGHD2-15*01 F 3 X 8 12 X.8.12 [X.13.38.11] CARHVTYYYGMDVW in-frame + gcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgttacttactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 278 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2874 2873 M02948:184:000000000-JK6TB:1:2115:21513:15277_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [2.17.38.11] CASSARPGIAVAGNLDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagttcggcccgccctggtatagcagtggctggtaatcttgactactgggaccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2875 2874 M02948:184:000000000-JK6TB:1:2115:21969:15597_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD5-12*01 F 3 8 8 19 8.8.19 [3.17.38.11] CARHVVVPYSGYDSAGWFDPW in-frame + aagggttctggatacagctttaccaccaactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatgggaatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtagtggttccctatagtggctacgattctgcaggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2876 2875 M02948:184:000000000-JK6TB:1:2115:26073:16317_1:N productive Homsap IGHV3-7*01 F 832 98.82 168/170 nt Homsap IGHJ6*02 F 206 88.46 46/52 nt Homsap IGHD1-14*01 ORF 3 X 8 9 X.8.9 [X.10.38.11] CARDRKGMDVW in-frame + ctccagggaaggggctggagtgggtggccaacataaaccaagatggaactgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcggaagggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 261 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2877 2876 M02948:184:000000000-JK6TB:1:2115:17243:18550_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD2-21*02 F 2 8 8 23 8.8.23 [3.17.38.11] CATSAYCGGDCYQTSYYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaccagtgcatattgtggtggtgactgctaccaaacatcctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2878 2877 M02948:184:000000000-JK6TB:1:2115:12461:18662_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 696 96.00 144/150 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*02 F 3 X 8 16 X.8.16 [X.4.38.11] CASAIVVVPAAIPQEDYW in-frame + atatcgcgagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtgccattgtagtagtaccagctgctataccgcaggaggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 262 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2879 2878 M02948:184:000000000-JK6TB:1:2115:25022:19282_1:N productive Homsap IGHV3-48*04 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-10*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARVGDHYYGSGASYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtgggggatcattactatggttcgggagcaagctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2880 2879 M02948:184:000000000-JK6TB:1:2115:17529:19288_1:N productive Homsap IGHV3-48*03 F 1007 94.62 211/223 nt Homsap IGHJ3*01 F 151 78.00 39/50 nt Homsap IGHD3-9*01 F 2 8 8 7 8.8.7 [3.17.38.11] CLKDYQGDW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaattgggtccgccaggcttcagggaaggggctggagtgggtttcatacattactagtagtggtagtaccatgtactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtttgaaggattaccagggggactggggccaagggacagtggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2881 2880 M02948:184:000000000-JK6TB:1:2115:7602:20392_1:N: productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1141 99.57 229/230 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-2*01 F 1 10 9 18 10.9.18 [2.17.38.11] CSREGYQLLLRARGYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) ccatctccggggacagtgtctctagcaacagtgctgcttggaactggatcaggcaatccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgttcaagagaggggtaccagctgctattaagagctcgtggctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 379 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2882 2881 M02948:184:000000000-JK6TB:1:2115:12076:20690_1:N productive Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-16*02 F 1 8 8 11 8.8.11 [3.17.38.11] CARAGGLSMGAYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagcgggcgggctctctatgggggcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2883 2882 M02948:184:000000000-JK6TB:1:2115:11593:20737_1:N productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-8*01 F 2 8 8 27 8.8.27 [3.17.38.11] CAREFRSSGVCTNGVCYGSGYYYYGMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagagtttagaagcagtggagtttgtactaatggtgtatgctatgggtcggggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 399 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2884 2883 M02948:184:000000000-JK6TB:1:2115:14644:23022_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1175 97.95 239/244 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 2 8 8 21 8.8.21 [10.17.38.11] CARYYYGSGSYYKLYYYYGMDVW in-frame + gggctcggagaagttctcctgcagggcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaagatattactatggttcggggagttattataagctatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2885 2884 M02948:184:000000000-JK6TB:1:2115:22823:23419_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ2*01 F 220 90.57 48/53 nt Homsap IGHD3-3*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKDLSDFWSGIRYFDLW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatactactgtgcgaaagatttgagcgatttttggagtgggataaggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2886 2885 M02948:184:000000000-JK6TB:1:2115:7929:24227_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARGMDVVVPAASFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaatggatgtagtagtaccagctgctagttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2887 2886 M02948:184:000000000-JK6TB:1:2114:25644:4234_1:N: productive Homsap IGHV4-59*08 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 228 86.67 52/60 nt Homsap IGHD2-21*01 F 1 8 7 11 8.7.11 [3.17.38.11] CARDGSFYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggctgtgtattactgtgcgagagatgggtcattctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2888 2887 M02948:184:000000000-JK6TB:1:2114:17086:4770_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-15*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARDGGMKQLRYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatggtggtatgaagcagcttcggtactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2889 2888 M02948:184:000000000-JK6TB:1:2114:5866:4827_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD6-13*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARGIAAAGYRYYYYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggatagcagcagctggatacaggtactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2890 2889 M02948:184:000000000-JK6TB:1:2114:7582:5047_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 3 8 8 10 8.8.10 [2.17.38.11] CALSYGGPFHYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgctcagctatggtggaccttttcactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2891 2890 M02948:184:000000000-JK6TB:1:2114:13382:6304_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD3-16*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARHGGSSPPYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatggggggagtagtcccccctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2892 2891 M02948:184:000000000-JK6TB:1:2114:15580:7057_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 638 94.37 134/142 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-14*01 ORF 3 X 8 11 X.8.11 [X.1.38.11] CARGRPDRPIKYW in-frame - gggggaaaagggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagaggccggcccgaccgccccataaaatactggggccagggaaccctggtcaccgtcccctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagattccctagtacgtgactgagcgggctggcaagg 0 0 287 4 (complrev_indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2893 2892 M02948:184:000000000-JK6TB:1:2114:16473:8096_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-14*01 ORF 2 8 8 13 8.8.13 [3.17.38.11] CARQALLAGPPIDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaagcattgcttgcggggccaccaatagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2894 2893 M02948:184:000000000-JK6TB:1:2114:26051:8577_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-22*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARGSYDSSGYYSDYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggagctatgatagtagtggttattactctgactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2895 2894 M02948:184:000000000-JK6TB:1:2114:19145:8667_1:N: productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDSRGYYYDSSGSPDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatagccgggggtattactatgatagtagtggttcacctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2896 2895 M02948:184:000000000-JK6TB:1:2114:22705:10705_1:N productive Homsap IGHV1-8*01 F 1014 95.89 210/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-21*02 F 3 8 8 17 8.8.17 [2.17.38.11] CARVGLLMAVTTLYYFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtcggattgctcatggcggtgactactctatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2897 2896 M02948:184:000000000-JK6TB:1:2114:12925:11249_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD5-24*01 ORF 1 8 8 18 8.8.18 [2.17.38.11] CSLPVEMATDNYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgttccctgcccgtagagatggctacggacaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2898 2897 M02948:184:000000000-JK6TB:1:2114:19677:11503_1:N productive Homsap IGHV1-18*01 F 995 89.75 219/244 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 8 18 8.8.18 [10.17.38.11] CARDNCSGGSCYSTAHDDYW in-frame + aggctgggttatcgggacccactgctcattttattacaccgttaccggctatggtatcaacaaggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagacaattgtagtggtggtagctgctacagtacggcccacgatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2899 2898 M02948:184:000000000-JK6TB:1:2114:27437:12038_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1014 95.89 210/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 11 8.8.11 [2.17.38.11] CAHSSGYYYLRYW in-frame + gcttccggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgctcatagtagtggttattactacttgcgctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2900 2899 M02948:184:000000000-JK6TB:1:2114:8209:12969_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 795 100.00 159/159 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 3 X 8 27 X.8.27 [X.7.38.11] CARVLGLKDIVVVPAARADDYYYYYMDVW in-frame + gggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttctgggtttgaaggatattgtagtagtaccagctgctcgggcggatgactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccctc 0 0 304 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2901 2900 M02948:184:000000000-JK6TB:1:2114:10456:13141_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ6*04 F 178 84.00 42/50 nt Homsap IGHD1-14*01 ORF 1 8 8 7 8.8.7 [3.17.38.11] CARSITDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggagtataacggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2902 2901 M02948:184:000000000-JK6TB:1:2114:6291:14544_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CATVSSGWYGMDYW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgagagccgaggacacggccgtatattactgtgcgaccgttagcagtggctggtacgggatggactactggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2903 2902 M02948:184:000000000-JK6TB:1:2114:16222:14739_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-23*01 ORF 2 8 8 12 8.8.12 [3.17.38.11] CATPEFYGGNGGYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaccccggaattctacggtggtaacgggggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2904 2903 M02948:184:000000000-JK6TB:1:2114:6110:14970_1:N: productive Homsap IGHV4-4*10 (F) 998 94.17 210/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD4-17*01 F 2 9 7 19 9.7.19 [3.17.38.11] CASDNYGDRPGTYYYYGMDVW in-frame + cactgtctctggtggcgccgtcagcagtggtaactggtggacttgggtccgccagcccccagggaaggggctggagtggattggggaaatctctgatagtgggaaaaccaactacaatccgtccctcaagagtcgagtcaccatttcactcgacaagtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagtgataactacggtgaccgtcccgggacttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2905 2904 M02948:184:000000000-JK6TB:1:2114:28517:14981_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 1 8 8 21 8.8.21 [2.17.38.11] CARDGTKGWFGELFHYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatggtacaaaagggtggttcggggagttattccactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2906 2905 M02948:184:000000000-JK6TB:1:2114:24701:15479_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1010 95.45 210/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARGSPRGGSYVNYW in-frame + cgctgtctatggtgggtccttcagtggttactactggaactggatccgccagcccccagggaaggggctggagtggattggtgaaataaatcatagtggaaccaccaactacaacccgtccctcaagagtcgagtcaccatatcagtggacacgttcaagaaccaattctccctggagctgacctctgtgaccgccgcggacacggctgtgtattactgcgcgagaggtagccctcggggtgggagctacgttaactactggggccagggaaccctggtcaccatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2907 2906 M02948:184:000000000-JK6TB:1:2114:13462:15537_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD5-18*01 F 1 8 7 19 8.7.19 [3.17.38.11] CARGVDTDNFELGHYWYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggtgtggatacggacaactttgaattgggccactactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2908 2907 M02948:184:000000000-JK6TB:1:2114:17477:15623_1:N productive (see comment) Homsap IGHV1-18*01 F 930 100.00 186/186 nt 99.46 185/186 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD1-26*01 F 2 8 8 11 8.8.11 [2.6.38.11] CAREGAQWELQDW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 33 nucleotides (from position 37 in the user submitted sequence), (do not cause frameshift) gcttctggttacacctttaccagctatggtatcagctggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagagggggcgcagtgggagctacaagactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 314 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2909 2908 M02948:184:000000000-JK6TB:1:2114:11558:16143_1:N productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 2 8 8 20 8.8.20 [2.17.38.11] CATAEMGYCSGGSCYSPFFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgaacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagccgaaatgggatattgtagtggtggtagctgctactcgcccttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2910 2909 M02948:184:000000000-JK6TB:1:2114:22803:17346_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD4-23*01 ORF 2 8 8 17 8.8.17 [3.17.38.11] CAKDQYYGGNLAYWYFDLW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcaatactacggtggtaacctcgcctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2911 2910 M02948:184:000000000-JK6TB:1:2114:28786:17836_1:N productive (see comment) Homsap IGHV1-18*01 F 912 98.92 184/186 nt 98.39 183/186 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-8*01 F 2 8 8 26 8.8.26 [2.6.38.11] CARGSGYCTNGVCYKTTLGYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 33 nucleotides (from position 37 in the user submitted sequence), (do not cause frameshift) gcttctggttacacctttaccagctatggtatcagctggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtagcggatattgtactaatggtgtatgctacaagactaccttgggctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2912 2911 M02948:184:000000000-JK6TB:1:2114:9995:17861_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-1*01 F 1 8 8 9 8.8.9 [3.17.38.11] CAGRNGSSDYW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagatccagggaaggggctggtgtgggtctcacgaattaatagtgatgtgagtgacacagataacgcggactccgtgaggggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggccgtgtattactgtgcgggaagaaatgggagttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2913 2912 M02948:184:000000000-JK6TB:1:2114:9943:18541_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-59*11 F or Homsap IGHV4-61*01 F or Homsap IGHV4-61*07 F or Homsap IGHV4-61*08 F 875 100.00 175/175 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD6-19*01 F 2 X 7 16 X.7.16 [X.13.38.11] CARDSFIAVAAWGAFDIW in-frame + ccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattcctttatagcagtggctgcctggggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 287 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2914 2913 M02948:184:000000000-JK6TB:1:2114:16026:18662_1:N productive Homsap IGHV3-20*01 F, or Homsap IGHV3-20*02 ORF 1079 98.21 219/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARDRGSGWSDYW in-frame + tgcagcctctggattcacctttgatgattatggcacgagctgggtccgccaagctccagggaaggggctggagtgggtctctggtattaattggaatggtggtagcacagattatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacactctgagagccgaggacacggccttgtatcactgtgcgagagatcggggcagtggctggtctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2915 2914 M02948:184:000000000-JK6TB:1:2114:11323:19546_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*01 F 2 8 8 20 8.8.20 [2.17.38.11] CATGGPYYYDSSGFPHAQIDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagcctatatggagttgaggagcctgagatctgacgacacggccgtgtattactgtgcgaccggaggaccttattactatgatagtagtggtttcccccacgctcagattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2916 2915 M02948:184:000000000-JK6TB:1:2114:15197:19630_1:N productive Homsap IGHV3-48*03 F 944 91.48 204/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD6-19*01 F 1 8 8 9 8.8.9 [3.17.38.11] CARGSGSMYSW in-frame + tgcagcctctggattcaccttcactatttatgaaatgaactgggtccgccaggcgccagggaaggggccagagtggatttcatatattagtactagtggtagtaccacatattacgcaagctctgtgaagggccggttcaccatctccagagacaacgccaagaactttctgtatctgcaaatgaacagcctgagagacgaagacacggctatgtattactgtgcgaggggcagtgggtcgatgtatagctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2917 2916 M02948:184:000000000-JK6TB:1:2114:9281:19762_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-8*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARDRRPDYSGWFDPW in-frame + gcttctgtaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgaaggcccgactactcagggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2918 2917 M02948:184:000000000-JK6TB:1:2114:4008:20006_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARDTSAHCSSTSCPIIQNW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagataccagcgcccattgtagtagtaccagctgccccattatacaaaattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2919 2918 M02948:184:000000000-JK6TB:1:2114:22201:20454_1:N productive Homsap IGHV1-8*03 F (see comment) 608 80.00 152/190 nt Homsap IGHJ4*02 F 183 92.86 39/42 nt 0 8 5 0.8.5 [X.17.38.11] CATANYW in-frame + low V-REGION identity (80.00%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release atatcgcgaggggaattctcacaggagccgagggggaaaagggttgggatggatgaaccctaacagtggcaacacagggtatgcagagacgttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagcgaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 269 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2920 2919 M02948:184:000000000-JK6TB:1:2114:20644:21006_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 975 93.24 207/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-24*01 ORF 1 8 8 13 8.8.13 [3.17.38.11] CASIEMAIGGNEDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagtatagagatggctatagggggaaacgaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2921 2920 M02948:184:000000000-JK6TB:1:2114:13267:21060_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F or Homsap IGHV4-59*08 F 1028 96.36 212/220 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 3 8 7 18 8.7.18 [3.17.38.11] CARGSMEDIVVYYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattaccgtgggactaccaactacaacccctccctcaagagtcgactcaccatatctatagacacgtccaagaaccagttctccctgaggctgagctctgtgaccgctgcagacacggccgtgtattactgtgcgagaggctcgatggaggatattgtagtatattactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2922 2921 M02948:184:000000000-JK6TB:1:2114:16292:21242_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 156 78.43 40/51 nt Homsap IGHD6-13*01 F 1 8 8 9 8.8.9 [3.17.38.11] CARGDSSRWSW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggggacagcagcaggtggagctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2923 2922 M02948:184:000000000-JK6TB:1:2114:24177:21461_1:N productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1034 95.96 214/223 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-22*01 F 2 9 7 20 9.7.20 [3.17.38.11] CAREGPYYYDSSGYRNNWFDPW in-frame + cgctgtctctggtgactccatcagcaatagtcactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcattctgggagcaccaactacagcccgtccctcaagagtcgagtcaccatatcagtagacaagtcgaagaaccagttctccgtgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaggtccgtattactatgatagtagtggttaccggaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2924 2923 M02948:184:000000000-JK6TB:1:2114:26025:21603_1:N productive Homsap IGHV5-10-1*04 F 1083 98.65 219/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 8 8 7 8.8.7 [3.17.38.11] CARLYLGYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccacgtattactgtgcgagactctatttgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2925 2924 M02948:184:000000000-JK6TB:1:2114:17950:23754_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARERGGYCSGGSCTLFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagtagcctgagatctgaggacacggccgtgtattactgtgcgagagagagagggggatattgtagtggtggtagctgcactctctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcccccgcggctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2926 2925 M02948:184:000000000-JK6TB:1:2114:12669:25194_1:N unproductive (see comment) Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 1 8 8 X 8.8.X [2.17.38.11] CARLLGTVSGQ#DYW out-of-frame + rearranged sequence, stop codons gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagattgttgggtacggtgtctggtcaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2927 2926 M02948:184:000000000-JK6TB:1:2113:23726:5242_1:N: productive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*05 F or Homsap IGHV1-69*06 F or Homsap IGHV1-69*10 F or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*14 F or Homsap IGHV1-69*17 F or Homsap IGHV1-69*19 F or Homsap IGHV1-69D*01 F 760 100.00 152/152 nt 99.34 151/152 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD4-17*01 F 1 8 1 15 8.1.15 [2.17.22.11] CASLRLPYYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 57 of V-REGION: 68 nucleotides (from position 87 in the user submitted sequence), (cause frameshift) ggcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtctacggctgccttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 261 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2928 2927 M02948:184:000000000-JK6TB:1:2113:12387:5260_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ6*04 F 172 85.11 40/47 nt Homsap IGHD1-26*01 F 2 8 8 7 8.8.7 [3.17.38.11] CARDVEPVW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgtagagcccgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2929 2928 M02948:184:000000000-JK6TB:1:2113:22007:5271_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ1*01 F 260 100.00 52/52 nt Homsap IGHD1-26*01 F 1 8 8 16 8.8.16 [2.17.38.11] CAMGTIVGATDAEYFQHW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatggaatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgatgggaaccatagtgggagctaccgacgctgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2930 2929 M02948:184:000000000-JK6TB:1:2113:22157:6317_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 271 98.21 55/56 nt 8 7 10 8.7.10 [3.17.38.11] CARDYYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgaggacacggctgtgtattactgtgcaagagattactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2931 2930 M02948:184:000000000-JK6TB:1:2113:7823:6478_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1078 98.64 218/221 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARDNKYGDIATAGKPFPSDYW in-frame + cagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtggcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaagtgaacagcctgagagccgaggacacggccgtatattattgtgcgagagataacaaatacggggatatagcaacagctggtaaaccatttccatctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 376 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2932 2931 M02948:184:000000000-JK6TB:1:2113:23395:6960_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt Homsap IGHD7-27*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARGRNWGTRYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggtcggaactggggaacccggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2933 2932 M02948:184:000000000-JK6TB:1:2113:16498:7452_1:N: productive Homsap IGHV3-48*03 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDYFGKGYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagattattttggaaagggctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2934 2933 M02948:184:000000000-JK6TB:1:2113:3033:8804_1:N:0 productive Homsap IGHV1-8*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD2-15*01 F 2 8 8 22 8.8.22 [2.17.38.11] CARAWVGTKRCSGGSCYSRGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaatagtggtagcacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgtgggtcggaacgaagaggtgtagtggtggtagctgctactcaaggggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2935 2934 M02948:184:000000000-JK6TB:1:2113:15899:9424_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD4-23*01 ORF 2 8 8 13 8.8.13 [2.17.38.11] CATPARYGGNYLDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcaacaccggcccggtacggtggtaactaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2936 2935 M02948:184:000000000-JK6TB:1:2113:19039:10216_1:N No rearrangement found Homsap IGHV3-21*07 (F) (see comment) 620 75.34 168/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found, stop codons low V-REGION identity (75.34%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcaacttcagaacttatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcgtccatcagtggtagtggttacaccagatatgacgcagactcagtgaagggccgactctccacctccagagacaacgccaagaactcactgtacgagagatattcgggcagtggttgaccatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 313 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2937 2936 M02948:184:000000000-JK6TB:1:2113:20019:10584_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARAGITIFGVVIYYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcggggattacgatttttggagtggtcatttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2938 2937 M02948:184:000000000-JK6TB:1:2113:3167:11634_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-25*01 F 2 8 7 17 8.7.17 [3.17.38.11] CARGVIAAPGGYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggggttatagcagccccggggggctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2939 2938 M02948:184:000000000-JK6TB:1:2113:16188:11661_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD4-17*01 F 2 8 8 16 8.8.16 [2.17.38.11] CAFGYYGDYSNYWYFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcttttgggtactacggtgactactccaactactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2940 2939 M02948:184:000000000-JK6TB:1:2113:5266:11888_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 971 92.83 207/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARREVVERAWRDFDYW in-frame + tgcagcctctggattcacctttagcacctatcccatgagctgggtccgccaggctccagggagggggctggagtgggtctcaactatcagtggtggcagtgaaagcacatattatgcagactccgcgaagggccggttcaccatctccagagacaactccaagaacacgctgtatctgcaaatgaacagcctgagaggcgacgacacggccgtatattactgtgcgcgacgggaggtagtggagagagcttggcgggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2941 2940 M02948:184:000000000-JK6TB:1:2113:27688:12082_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1086 99.54 218/219 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [2.17.38.11] CAKGIVVIPAALSYWYFDLW in-frame + gcctctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaagggaattgtagtaataccagctgctctcagctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2942 2941 M02948:184:000000000-JK6TB:1:2113:25910:12106_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 942 92.24 202/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-16*01 F 2 8 8 11 8.8.11 [2.17.38.11] CATAQTRGAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagctcaaacccggggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2943 2942 M02948:184:000000000-JK6TB:1:2113:5349:12548_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 978 94.06 206/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-3*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARGTYYDFWSGYRTDIYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggacgtattacgatttttggagtggttatcgtacggatatttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2944 2943 M02948:184:000000000-JK6TB:1:2113:27848:12641_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-10*01 F 2 8 8 20 8.8.20 [2.17.38.11] CAKGMGVQYYYGSGLQVAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaaagggatgggtgttcagtattactatggttcggggctgcaggtggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2945 2944 M02948:184:000000000-JK6TB:1:2113:22480:12669_1:N unproductive (see comment) Homsap IGHV3-48*03 F 1054 98.17 214/218 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-10*01 F 1 8 8 X 8.8.X [1.17.38.11] CARGGH#DAFDIW out-of-frame + rearranged sequence, stop codons cctctggattcaccttcagtagtcatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtactggtagttccatatactacgcagactctgtgaagggccgattgaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagggggccattgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 313 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2946 2945 M02948:184:000000000-JK6TB:1:2113:17912:13676_1:N productive Homsap IGHV3-13*01 F 884 89.09 196/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 7 13 8.7.13 [3.17.38.11] CTRHRRSDWYWFANW in-frame + tgcagcctctggattcagcttcggcacctccgacttccactgggtccgccaaggtagaggaaagggtctggagtgggtctcggctattggtgctgctagtgacacatactactcagactccgtgaagggccgattcaccatctccagggacaacgccaagaactcagtgtctctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtacgagacataggcgcagtgactggtactggtttgccaactggggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2947 2946 M02948:184:000000000-JK6TB:1:2113:15013:13707_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD3-22*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARDRVIVDPNYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcgggtgatagtagacccaaactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2948 2947 M02948:184:000000000-JK6TB:1:2113:20636:13924_1:N productive Homsap IGHV1-2*02 F 978 94.06 206/219 nt Homsap IGHJ1*01 F 251 98.08 51/52 nt Homsap IGHD6-6*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARGPVNPLSPEYFQHW in-frame + gcttctggaaacaccttcaccgactactatgtgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggctcaaccctaacagtggtggcacaaactatgcacagcagtttctgggcagggtcaccatgaccagagacacgtccatcagtacagcctacttggaactgaacaggctgacatctgccgacacggccgtgtattactgtgcgagaggcccggtaaaccccctctcccctgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2949 2948 M02948:184:000000000-JK6TB:1:2113:13881:14836_1:N productive Homsap IGHV3-7*01 F, or Homsap IGHV3-7*02 F or Homsap IGHV3-7*04 (F) 762 93.10 162/174 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-9*01 F 2 X 8 17 X.8.17 [X.12.38.11] CARALPYYDILTGYYFRYW in-frame + cccactccagccccttccctggagtgggtggccaccataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagccctaccatattacgatattttgactggttattactttaggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccacaacccttttccccc 0 0 289 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2950 2949 M02948:184:000000000-JK6TB:1:2113:11223:15133_1:N productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD3-9*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKDISVAGFWTYGMDVW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatatttcggtggctggtttttggacctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2951 2950 M02948:184:000000000-JK6TB:1:2113:16134:15188_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 214 84.75 50/59 nt Homsap IGHD2-2*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARSVMYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagatctgtcatgtactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2952 2951 M02948:184:000000000-JK6TB:1:2113:3282:15603_1:N: productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-16*02 F 3 8 8 19 8.8.19 [3.17.38.11] CAREMITFGGVIVIDDAFDIW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagatgattacgtttgggggagttatcgttatagacgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2953 2952 M02948:184:000000000-JK6TB:1:2113:6120:15794_1:N: productive Homsap IGHV3-11*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-22*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARDSTLYYYDSSGYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagattcgacgctctattactatgatagtagtggttattactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2954 2953 M02948:184:000000000-JK6TB:1:2113:12001:15861_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F or Homsap IGHV3-23*01 F or Homsap IGHV3-23*04 F or Homsap IGHV3-23*05 F or Homsap IGHV3-23D*01 F 935 91.03 203/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-2*01 F 2 8 8 14 8.8.14 [3.17.38.11] CASSRWKAGPYYFDYW in-frame + tgcagcctctggattcacctttagagattatgccatgagttgggtccgccaaactccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatggacagcctgagagtcgaggacacggctgtatattactgtgcgagctctcgctggaaggctggaccctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2955 2954 M02948:184:000000000-JK6TB:1:2113:14426:16409_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1070 97.76 218/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-2*01 F 1 8 8 18 8.8.18 [3.17.38.11] CARGPLEWSPLRYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaggggcccgttggagtggtcccctctgcggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2956 2955 M02948:184:000000000-JK6TB:1:2113:6415:17077_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 721 93.29 153/164 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-2*01 F 3 X 8 25 X.8.25 [X.8.38.11] CARGYQDIVVVPGRLNHEDNDNWFDPW in-frame + ggaaggggctggagtgggtctcatctattagtgttagtggtggtagcacatactatgcagactccgtgaagggccggttcaccatctccagtgacacttccatgaacactctgtttctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagaggataccaggatattgtagtagtaccaggcagactaaaccatgaagacaatgacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 303 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2957 2956 M02948:184:000000000-JK6TB:1:2113:24040:17327_1:N productive Homsap IGHV4-34*03 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD4-23*01 ORF 3 8 7 17 8.7.17 [3.17.38.11] CARVRSTVVTRLNYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagtcaggagtacggtggtaactcgactaaactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2958 2957 M02948:184:000000000-JK6TB:1:2113:11969:17840_1:N productive Homsap IGHV3-7*01 F 953 91.93 205/223 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD2-21*02 F 3 8 8 9 8.8.9 [3.17.38.11] CTRVVTWFDPW in-frame + tgcagcctctggattcaccttaagtggctattggatgtcctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccccgatggaagtgtgaaatactacgtggactctgtgaggggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacaggtgtttactactgcacgagggtagtgacgtggttcgacccctggggccagggaacgctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2959 2958 M02948:184:000000000-JK6TB:1:2113:22880:18291_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt 8 8 7 8.8.7 [3.17.38.11] CARVYDDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcaccgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtctacgatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2960 2959 M02948:184:000000000-JK6TB:1:2113:10895:18357_1:N No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagattgggtggctacgattgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 304 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2961 2960 M02948:184:000000000-JK6TB:1:2113:17020:19748_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARDYYDSSGYYFDAFDIW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagattactatgatagtagtggttattactttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2962 2961 M02948:184:000000000-JK6TB:1:2113:27670:20258_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 174 90.48 38/42 nt Homsap IGHD7-27*01 F 3 8 8 5 8.8.5 [3.17.38.11] CATGGYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccaattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgacagggggctattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2963 2962 M02948:184:000000000-JK6TB:1:2113:19731:20798_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*02 F 2 8 8 19 8.8.19 [2.17.38.11] CARGYCSSTSCYTISDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggggtattgtagtagtaccagctgctatacaatatcggacgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2964 2963 M02948:184:000000000-JK6TB:1:2113:8388:20978_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-18*01 F 3 8 8 19 8.8.19 [2.17.38.11] CARAGVQNSYGFRSLYYFDYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagcaggagtacaaaacagctatggtttccggtctttgtactactttgactactggggccagggaaccctggtcaccgtctcctcaggccctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 379 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2965 2964 M02948:184:000000000-JK6TB:1:2113:14775:21539_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARDAGSYSFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagacgctgggagttactcttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2966 2965 M02948:184:000000000-JK6TB:1:2113:17480:22972_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-19*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARVKAGVDAFDIW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttaaagcaggggttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2967 2966 M02948:184:000000000-JK6TB:1:2113:23294:23000_1:N productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 1186 97.58 242/248 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-7*01 F 3 8 8 11 8.8.11 [11.17.38.11] CVKKWNYGPYDYW in-frame + cttgggtgtcccttagactctcctgtgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagatccagggaaggggctggtgtgggtctcacgtattaatagtgatgggactagcacaacctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgtgaaaaaatggaactacggtccttatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2968 2967 M02948:184:000000000-JK6TB:1:2113:18990:23108_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARQLGITMVRGVIIRSDDHYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaattgggtattactatggttcggggagttattatacgtagtgatgaccactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2969 2968 M02948:184:000000000-JK6TB:1:2113:11674:24302_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-14*01 ORF 1 8 8 8 8.8.8 [3.17.38.11] CARTGPYIHW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaacgggaccctatatccactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2970 2969 M02948:184:000000000-JK6TB:1:2112:9081:2379_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGEASYSGSYAYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagaggtgaggcctcgtatagtgggagctacgcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgtccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2971 2970 M02948:184:000000000-JK6TB:1:2112:19706:2436_1:N: No rearrangement found Homsap IGHV4-34*13 F 876 90.14 192/213 nt 8 7 X 8.7.X [23.17.38.X] - no rearrangement found, stop codons gggggaaaagggttggggcggatgcactccctgaagagacggtgaccgtggtccctttgccccagacgtctatgtagtagtagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagagccagttctccctgaagctgacctacgtgaccgctgcggacacggccatgtattactgtgcgagaggaattgttgtaccagcagcttccgccg 0 0 313 4 (complrev_indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2972 2971 M02948:184:000000000-JK6TB:1:2112:22314:2881_1:N: productive Homsap IGHV5-51*01 F 1190 97.98 242/247 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-10*01 F 2 8 8 20 8.8.20 [11.17.38.11] CARYSSGSYPPPYYYYYGMDVW in-frame + cggtgagtctctagagatctcctgtaagggttctggatacagctttaccagctaccggatcggctgggtgcgccagatgcccgggaaaggcctggaggggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatatagttcggggagttaccctccaccctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2973 2972 M02948:184:000000000-JK6TB:1:2112:17962:4729_1:N: unproductive (see comment) Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 1 8 8 X 8.8.X [2.17.38.11] CARSRSLVTMIVVAPPP##DAFDIW out-of-frame + rearranged sequence, stop codons gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaggagtaggtccctggttactatgatagtagtggcccccccccccctatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2974 2973 M02948:184:000000000-JK6TB:1:2112:19409:5191_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1068 98.63 216/219 nt Homsap IGHJ5*02 F 183 84.31 43/51 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARDRESSGWLMFDPW in-frame + gcttctggatacaccttcactaactatgctatacattgggtgcgccaggcccccggacaaaggcttgagtggacgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagggatcgggagagcagtgggtggttaatgttcgacccctggggccagggaaccctagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2975 2974 M02948:184:000000000-JK6TB:1:2112:21295:5774_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-2*02 F 2 8 8 19 8.8.19 [2.17.38.11] CARDEGGSSKTTEYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccctatattactgtgcgagagatgagggcggcagcagcaaaaccacagaatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2976 2975 M02948:184:000000000-JK6TB:1:2112:8573:6202_1:N:0 productive (see comment) Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 661 99.25 133/134 nt 98.51 132/134 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-11*01 ORF 2 8 X 19 8.X.19 [3.2.31.11] CARSRVDDYSNYDHKKGFDYW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 88 nucleotides (from position 42 in the user submitted sequence), (cause frameshift) aagggttctgaatacagctttaccagctactggatcagctgggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatcgcgtgtcgatgactacagtaactacgaccacaaaaagggttttgactactggggcctgggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 286 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2977 2976 M02948:184:000000000-JK6TB:1:2112:15689:7797_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [2.17.38.11] CAREGQGYYDSSGYTNYFDYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggggcagggttactatgatagtagtggttataccaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2978 2977 M02948:184:000000000-JK6TB:1:2112:15087:8229_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1059 98.17 215/219 nt Homsap IGHJ5*02 F 162 84.44 38/45 nt Homsap IGHD6-19*01 F 3 8 8 6 8.8.6 [2.17.38.11] CARAWVVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgtgggttgtctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 332 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2979 2978 M02948:184:000000000-JK6TB:1:2112:9767:8629_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-18*01 F 3 8 8 18 8.8.18 [3.17.38.11] CAKDLGSRAGYSYGDYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatctggggtctcgtgctggatacagctatggagactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2980 2979 M02948:184:000000000-JK6TB:1:2112:3123:8800_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-21*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARSSLSIPWYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatcttcgctctctattccgtggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2981 2980 M02948:184:000000000-JK6TB:1:2112:8403:8812_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1047 96.85 215/222 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARRQKLGYSDSNYYFSIW in-frame + cagggttccggatacagttttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagtacgtccttccaaggccaggtcaccatctcagtcgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgccagaagctgggatactctgatagtaattattatttctctatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2982 2981 M02948:184:000000000-JK6TB:1:2112:15834:9044_1:N: productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-9*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARADRILTGLVGYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagcggaccgtattttgactggtttggtaggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcttctcctgtgagaatccccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2983 2982 M02948:184:000000000-JK6TB:1:2112:18724:11682_1:N productive Homsap IGHV3-48*03 F 1034 95.96 214/223 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD6-19*01 F 1 8 8 18 8.8.18 [3.17.38.11] CVRDARDGYSGGWGYGMDVW in-frame + tgcaacctctggattcaccttcagttcttatgaaatgatctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtggtagtggtagttccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcattgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattattgtgtaagagacgcgagagacggatatagcggtggctggggctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2984 2983 M02948:184:000000000-JK6TB:1:2112:25724:11821_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1001 95.00 209/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 8 7 13 8.7.13 [3.17.38.11] CVSSPYYYGSGLDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtcgcacgtattaatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgtatctagtccgtattactatggttcgggccttgactactggggacagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2985 2984 M02948:184:000000000-JK6TB:1:2112:12659:11966_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARYYGDPSVLDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggtactacggtgacccttccgtccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2986 2985 M02948:184:000000000-JK6TB:1:2112:3966:11982_1:N: unproductive (see comment) Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-16*01 F 1 8 8 X 8.8.X [2.17.38.11] CARDGG#DAFDIW out-of-frame + rearranged sequence, stop codons gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgggggatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2987 2986 M02948:184:000000000-JK6TB:1:2112:6192:12189_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-11*01 ORF 2 8 8 12 8.8.12 [3.17.38.11] CARKQNKDYILRYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaaaacagaacaaggactacatccttcgctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2988 2987 M02948:184:000000000-JK6TB:1:2112:12976:12465_1:N productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 175 88.64 39/44 nt Homsap IGHD5-18*01 F 1 8 8 6 8.8.6 [2.17.38.11] CARDVTDW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatgttaccgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 332 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2989 2988 M02948:184:000000000-JK6TB:1:2112:15608:12770_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-10*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARDGSGSPYNWFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatggttcggggagtccgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2990 2989 M02948:184:000000000-JK6TB:1:2112:4422:13231_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD6-25*01 F 3 10 7 16 10.7.16 [3.17.38.11] CAREQSERIRYYYYMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaacaatcggagcgcattcgttactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2991 2990 M02948:184:000000000-JK6TB:1:2112:20221:13389_1:N productive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F or Homsap IGHV4-59*13 F (see comment) 785 100.00 157/157 nt 99.36 156/157 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-2*01 F 3 8 2 14 8.2.14 [3.1.38.11] CARDQEVVPAAPSSYW in-frame + potentially, because of detected insertion/deletion the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (2 AA in M02948:184:000000000-JK6TB:1:2112:20221:13389_1:N; 7 AA in Homsap IGHV4-59*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release in FR2-IMGT, from codon 40 of V-REGION: 63 nucleotides (from position 38 in the user submitted sequence), (do not cause frameshift) cactgtctctggtggctccatcagtagttactactggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatcaggaggtagtaccagctgctccgtcaagctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 294 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2992 2991 M02948:184:000000000-JK6TB:1:2112:21764:13483_1:N productive Homsap IGHV1-2*02 F 960 93.15 204/219 nt Homsap IGHJ4*03 F (see comment) 150 79.17 38/48 nt Homsap IGHD2-2*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARTRLTSSPNCHPW in-frame + other possibilities: Homsap IGHJ3*01 and Homsap IGHJ3*02 (highest number of consecutive identical nucleotides) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtggcacaaattatgcacagcagtttcagggcagggtcaccatgaccggggacacgtccatcagcacagcctacatggagctgagcaggctgaaatccgacgacacggccgtgtattactgtgcgagaacacgtctgactagtagtcccaactgccacccctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2993 2992 M02948:184:000000000-JK6TB:1:2112:26749:13603_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARGVEVHYDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggggtagaggtacactatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2994 2993 M02948:184:000000000-JK6TB:1:2112:7779:13927_1:N: productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD1-7*01 F 2 8 7 17 8.7.17 [3.17.38.11] CARAGRLELPYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagccggtaggctggaactaccctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2995 2994 M02948:184:000000000-JK6TB:1:2112:14134:14751_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 160 80.00 40/50 nt Homsap IGHD3-9*01 F 2 8 8 8 8.8.8 [2.17.38.11] CARGPGLGVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccctggtttgggggtctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2996 2995 M02948:184:000000000-JK6TB:1:2112:27252:18129_1:N productive Homsap IGHV3-21*05 (F) 1007 94.62 211/223 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD2-21*02 F 3 8 8 18 8.8.18 [3.17.38.11] CAKAAPRVVVTALYWYFDLW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctggagtgggtttcatacattagtagtagtagtacttacacaaactacgcagactctgtgaggggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagcggcccctagggtggtggtgactgccctctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2997 2996 M02948:184:000000000-JK6TB:1:2112:10396:18523_1:N productive Homsap IGHV3-7*01 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 2 8 8 14 8.8.14 [3.17.38.11] CLIAALGRGDPQVDYW in-frame + tatcgcctctggattcacctttaatacttattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaacatgatggaagtgagaaatactatgtggactctgtgaagggccgattcgccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagggccgaggacacggctgtatattactgcctcatagcagcgcttggaaggggggatccccaggtggactattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2998 2997 M02948:184:000000000-JK6TB:1:2112:9329:18627_1:N: unproductive (see comment) Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 178 84.00 42/50 nt Homsap IGHD1-1*01 F 3 8 8 X 8.8.X [3.17.38.11] CARELESRAPD##DIW out-of-frame + rearranged sequence, stop codons tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagctggaatcgcgggcgcctgatgcttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 358 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
2999 2998 M02948:184:000000000-JK6TB:1:2112:13719:18664_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 191 87.76 43/49 nt Homsap IGHD1-26*01 F 1 8 7 8 8.7.8 [3.17.38.11] CARDGARDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattattgtgcgagagatggagctagggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3000 2999 M02948:184:000000000-JK6TB:1:2112:5844:18818_1:N: productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARDRRPPIGRSTSRIYYFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatcggcgcccacctattggtcggagtaccagccgaatctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3001 3000 M02948:184:000000000-JK6TB:1:2112:8165:18943_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*03 F (see comment) 150 79.17 38/48 nt Homsap IGHD2-21*02 F 2 8 8 14 8.8.14 [2.17.38.11] CARVGRLGTGGDPSYW in-frame + other possibilities: Homsap IGHJ3*01 and Homsap IGHJ3*02 (highest number of consecutive identical nucleotides) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagttggccgattaggaaccggcggggaccccagctactggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3002 3001 M02948:184:000000000-JK6TB:1:2112:27532:19372_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-3*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARGAPFGVATGANNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacaacaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtgctccttttggagtggctacgggggccaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3003 3002 M02948:184:000000000-JK6TB:1:2112:21086:19524_1:N productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1145 100.00 229/229 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-3*01 F 2 8 10 14 8.10.14 [3.17.38.11] CTTAFNYDFWSGCLYW in-frame + tgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtaccacagcgttcaattacgatttttggagtggttgcctctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3004 3003 M02948:184:000000000-JK6TB:1:2112:20404:19838_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 718 85.57 166/194 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 1 8 21 1.8.21 [X.17.38.11] CAKDKSRNVRYYDTSGYSSFDYW in-frame + atatcgcgaggggaattctcacaggagacgagggggaaaagggttgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtgtattactgtgcgaaagataagtcccgtaatgttcggtactatgatactagtggttattcaagctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 321 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3005 3004 M02948:184:000000000-JK6TB:1:2112:19458:19973_1:N productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARDQSGSYAGAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgaacacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaccaaagtgggagctacgcgggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3006 3005 M02948:184:000000000-JK6TB:1:2112:24898:21268_1:N productive Homsap IGHV1-18*01 F, or Homsap IGHV1-8*01 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 1 8 8 10 8.8.10 [2.17.38.11] CARFGVLPSDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagattcggggtattaccctctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3007 3006 M02948:184:000000000-JK6TB:1:2112:11342:24146_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 10 8.8.10 [2.17.38.11] CARTSGSYWGYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagaacgagtgggagctactggggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3008 3007 M02948:184:000000000-JK6TB:1:2111:14414:2166_1:N: productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-15*01 F 3 8 8 18 8.8.18 [2.17.38.11] CATGVAVVVAATPMVPDGYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaggggtggcggtggtggtagctgctactcctatggtcccggacgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3009 3008 M02948:184:000000000-JK6TB:1:2111:8795:4025_1:N:0 productive Homsap IGHV1-18*01 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARGYYFYSPRHGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggctactacttttatagcccaaggcacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3010 3009 M02948:184:000000000-JK6TB:1:2111:8147:5392_1:N:0 No rearrangement found Homsap IGHV3-48*03 F 998 94.17 210/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcaccttcgggagttacgaaatgagttgggtccgccaggctccggggaaggggctggagtgggtttcatacattaggagtgatggtggtaccacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtctatcactgtgttgctagtctcctgtgagaattcccctcgcgatat 0 0 259 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3011 3010 M02948:184:000000000-JK6TB:1:2111:9913:5475_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD5-12*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARLSGEEGYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttagtggcgaggaggggtactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3012 3011 M02948:184:000000000-JK6TB:1:2111:9609:5816_1:N:0 productive (see comment) Homsap IGHV1-18*01 F 950 100.00 190/190 nt 99.47 189/190 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [2.7.38.11] CARRYDSSGYYYYYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 29 nucleotides (from position 38 in the user submitted sequence), (cause frameshift) gcttctggttacacctttaccagctatggtatcagctgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaggcgatatgatagtagtggttattactattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3013 3012 M02948:184:000000000-JK6TB:1:2111:20683:6094_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARDLGYGDYEFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcttggctacggtgactacgagtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3014 3013 M02948:184:000000000-JK6TB:1:2111:10323:6341_1:N: productive Homsap IGHV4-61*01 F 1121 99.56 225/226 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-16*02 F 2 10 7 9 10.7.9 [3.17.38.11] CAGGYGYFGYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagttggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcagggggctatggttacttcggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3015 3014 M02948:184:000000000-JK6TB:1:2111:24918:6711_1:N: productive Homsap IGHV3-21*04 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-11*01 ORF 2 8 8 12 8.8.12 [3.17.38.11] CAKVPPSGNYPSGW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtccctccctccggtaactacccttccggctggggccagggaaccccggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3016 3015 M02948:184:000000000-JK6TB:1:2111:13088:6730_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 3 8 8 19 8.8.19 [2.17.38.11] CARDLVVPAAIFPYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatctcgtagtaccagctgctatcttcccttactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3017 3016 M02948:184:000000000-JK6TB:1:2111:20088:8080_1:N: productive Homsap IGHV4-39*07 F, or Homsap IGHV4-39*09 (F) 1112 99.12 224/226 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-10*01 F 1 10 7 18 10.7.18 [3.17.38.11] CARGQFGELFGYYYYGMDVW in-frame + cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattgggagtatctattatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggacagttcggggagttattcggttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3018 3017 M02948:184:000000000-JK6TB:1:2111:19014:8227_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 7 17 8.7.17 [3.17.38.11] CAWTYCSSTSCYYYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgcgcctggacctattgtagtagtaccagctgctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3019 3018 M02948:184:000000000-JK6TB:1:2111:24117:8625_1:N: productive Homsap IGHV3-33*03 F 1051 97.29 215/221 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-14*01 ORF 2 8 8 11 8.8.11 [2.17.38.11] CARSVPNLPFDYW in-frame + cagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactcagtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtatattactgtgcgagatcggtaccaaacctgccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 349 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3020 3019 M02948:184:000000000-JK6TB:1:2111:24635:8919_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD7-27*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARQRTGDKDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagcggactggggataaggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3021 3020 M02948:184:000000000-JK6TB:1:2111:16467:10142_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1043 96.41 215/223 nt Homsap IGHJ5*02 F 174 82.35 42/51 nt Homsap IGHD1-26*01 F 3 8 8 9 8.8.9 [3.17.38.11] CASFHSGSYAW in-frame + tgcagcctctggattcatctttagtgattattggatgaattgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagtttccatagtgggagctacgcgtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3022 3021 M02948:184:000000000-JK6TB:1:2111:16151:10656_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD4-17*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARFTREGDGDYGGDYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagattcaccagggagggcgacggtgactacgggggggactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3023 3022 M02948:184:000000000-JK6TB:1:2111:28329:10936_1:N productive Homsap IGHV1-18*01 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARDRGWSSHWYGVGAIDYW in-frame + gcttctggttacaccttcaccagttatggtattagttgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagtgcttacaatggtgacacaaactttgcacagaagttccagggcagagtcaccatggccacagacacatccacgaacacagcctacatggaactgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcgggggtggagcagtcactggtacggagtgggagctattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3024 3023 M02948:184:000000000-JK6TB:1:2111:25816:11604_1:N productive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt 98.65 220/223 nt Homsap IGHJ1*01 F (see comment) 161 78.85 41/52 nt Homsap IGHD1-26*01 F 3 8 8 9 8.8.9 [3.17.38.11] CAMSSGSYPNW in-frame + potentially, because of detected insertion/deletion other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) in CDR2-IMGT at codon 56 of V-REGION: 'ATTAGTGGTAATGGT' (15 nucleotides at position 86 to 100 in the user submitted sequence), (do not cause frameshift); tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctATTAGTGGTAATGGTattagtggtagttgttgtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgatgtcaagtgggagctaccctaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtaagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3025 3024 M02948:184:000000000-JK6TB:1:2111:23579:12811_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-16*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARDRGSSTSHNTLYYYMDVW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcgggggagtagtaccagccataataccctatactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3026 3025 M02948:184:000000000-JK6TB:1:2111:15346:12952_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 3 8 8 29 8.8.29 [2.17.38.11] CARTRLPSEDIVVVPAAMRQRAYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaccagacttccctctgaggatattgtagtagtaccagctgctatgcggcaacgcgcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 401 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3027 3026 M02948:184:000000000-JK6TB:1:2111:19669:14237_1:N unproductive (see comment) Homsap IGHV4-30-4*01 F 1094 96.17 226/235 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD1-26*01 F 3 10 7 12 10.7.12 [6.17.38.11] CARMIGGSYGYDPW in-frame + rearranged sequence, stop codons cctcacctgcactgtctctggtggctccatcagcagtggtgattcctactggagttggatccgccagcccccaggggagggcctggagtggattgggttcatctattacagtgggaccgcctactacaacccgtccctcaagagtcgactcaccatatcattagacacgtccaagaaccagttctccctgaagctgagctctatgactgccgcagacacggccgtgtattactgtgccagaatgatcggtgggagctacgggtacgacccctggggctagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3028 3027 M02948:184:000000000-JK6TB:1:2111:10304:14318_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKGAMIVVVINYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggggctatgatagtagtggttattaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3029 3028 M02948:184:000000000-JK6TB:1:2111:10751:14628_1:N productive Homsap IGHV3-7*03 F 1061 97.31 217/223 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARVRSYSHYMDVW in-frame + other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagtaactattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagaaagatggaggtgagaagtattatgtggactctgtgaagggccgattcaccatctctagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagttaggtcgtatagtcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3030 3029 M02948:184:000000000-JK6TB:1:2111:24457:16167_1:N unproductive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD4-17*01 F 1 8 8 X 8.8.X [2.17.38.11] CARGNVYGDYGG#DYW out-of-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggaacgtctacggtgactacggaggggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 355 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3031 3030 M02948:184:000000000-JK6TB:1:2111:26834:16439_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD4-17*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARCYGDYGQADYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggtgctacggtgactacggccaagccgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3032 3031 M02948:184:000000000-JK6TB:1:2111:15872:17275_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 3 8 8 9 8.8.9 [2.17.38.11] CTRDRSNNDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccttgaccacagacacatccacgagcacagcctacatggagttggggagcctgacctctgacgacacggccgtgtattactgtacgagagatcggagcaacaatgactattggggccagggaaccctggtcaccgtctcgtcagggagtgcatccgccccaacccttttccccctcgtctcctgttgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3033 3032 M02948:184:000000000-JK6TB:1:2111:23408:17759_1:N productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD6-13*01 F 1 8 8 19 8.8.19 [3.17.38.11] CARGPSGYSSSWYFWYYMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaggcccatccgggtatagcagcagctggtatttctggtactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggggtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3034 3033 M02948:184:000000000-JK6TB:1:2111:13009:18093_1:N productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-23*01 ORF 3 8 8 13 8.8.13 [2.17.38.11] CARQTTVVTDPFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgagacagactacggtggtaaccgacccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3035 3034 M02948:184:000000000-JK6TB:1:2111:2995:18352_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD5-12*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARSTFGNRGSYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggtccacctttggtaataggggctcttactacggtatggacgtctggggccaagggaccacggtcaccgtcgcctcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3036 3035 M02948:184:000000000-JK6TB:1:2111:3210:18386_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 185 89.13 41/46 nt 8 8 5 8.8.5 [2.17.38.11] CADAHYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggacgcacactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3037 3036 M02948:184:000000000-JK6TB:1:2111:16656:18456_1:N productive Homsap IGHV3-48*03 F 1070 97.76 218/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*01 F 3 8 8 20 8.8.20 [3.17.38.11] CASVGIVVVPAAEGADDAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagtgtcggcattgtagtagtaccagctgccgaaggggcggatgatgcttttgatatctggggccaagggacaatggtcaccgtcttttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3038 3037 M02948:184:000000000-JK6TB:1:2111:9483:19245_1:N: productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARDRYDFWSGYFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgagagatcgttacgatttttggagtggttattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3039 3038 M02948:184:000000000-JK6TB:1:2111:21434:20337_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-15*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARGARGVVVAAMVLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggggcgaggggggtggtggtagctgctatggtcttgtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3040 3039 M02948:184:000000000-JK6TB:1:2111:18628:20411_1:N productive Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARVDYGDYVGPFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagggttgactacggtgactacgtaggtccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3041 3040 M02948:184:000000000-JK6TB:1:2111:11341:20498_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD4-17*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARCPDYGLNVNWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatgccccgactacggactaaacgttaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3042 3041 M02948:184:000000000-JK6TB:1:2111:13211:23909_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARGVSRDVNYFDYW in-frame + aagggttctggatacagctttaccagctactggataggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggagtatcccgcgacgtcaactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3043 3042 M02948:184:000000000-JK6TB:1:2110:16769:2378_1:N: unproductive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD3-10*01 F 1 8 8 X 8.8.X [3.17.38.11] CAKDMVL##FDPW out-of-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctaagagccgaggacacggccgtatattactgtgcaaaagatatggttctttgggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 349 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3044 3043 M02948:184:000000000-JK6TB:1:2110:16847:3033_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARAGVYRYGPLGYW in-frame + tgcagcctctgggttcaccgtcagtggcaactacatgacctgggtccgccaggttccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagcgggtgtatacaggtatggtccccttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3045 3044 M02948:184:000000000-JK6TB:1:2110:7088:3057_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARLGGYSGSETQGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttggggggtatagtgggagcgagacacagggctactggggccagggaaccctggtcacagtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3046 3045 M02948:184:000000000-JK6TB:1:2110:11509:3265_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARQHDSSGYLPYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagacacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagcatgatagtagtggttatttaccgtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3047 3046 M02948:184:000000000-JK6TB:1:2110:21377:4481_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD3-3*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKGHDFWSGYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggtcacgatttttggagtggctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 358 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3048 3047 M02948:184:000000000-JK6TB:1:2110:7878:8406_1:N:0 productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-17*01 F 2 8 8 8 8.8.8 [2.17.38.11] CARVDYGINW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtggactacggaataaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3049 3048 M02948:184:000000000-JK6TB:1:2110:10277:10329_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-2*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKGDIVVVPAAIDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggggatattgtagtagtaccagctgctattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaatccccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3050 3049 M02948:184:000000000-JK6TB:1:2110:27609:10479_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [2.17.38.11] CASLYCSGGSCEVGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcttatattgtagtggtggtagctgcgaagttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3051 3050 M02948:184:000000000-JK6TB:1:2110:18319:10696_1:N productive Homsap IGHV3-48*03 F 832 98.82 168/170 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-8*01 F 2 X 8 10 X.8.10 [X.10.38.11] CATLGGGHFDYW in-frame + atccagggcaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaccctaggtggaggccattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttccccc 0 0 263 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3052 3051 M02948:184:000000000-JK6TB:1:2110:17720:10737_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAKDPLPRSGGSCYSYWFDPW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaaagatccccttccacgtagtggtggtagctgctactcctactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3053 3052 M02948:184:000000000-JK6TB:1:2110:19685:10844_1:N productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*02 F 915 90.87 199/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-26*01 F 3 8 8 7 8.8.7 [2.17.38.11] CATEGGDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaatagtggcaacacaggctatgcacagaacttccagggcagactcaccatgaccagggacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagagggtggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3054 3053 M02948:184:000000000-JK6TB:1:2110:25723:11899_1:N productive Homsap IGHV1-8*01 F 1059 98.17 215/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARDGLEDSSGYDYW in-frame + gcttctggatacaccttcgccagttatgatttcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccatatattactgtgcgagagatgggctagaggatagtagtggttacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3055 3054 M02948:184:000000000-JK6TB:1:2110:20771:13134_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD3-16*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARMETVGGEIWYFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaattcacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaatggaaacggttggcggtgagatctggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3056 3055 M02948:184:000000000-JK6TB:1:2110:17761:13366_1:N productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1106 99.55 222/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-2*01 F 3 9 7 13 9.7.13 [3.17.38.11] CARVVPAAEGWFDPW in-frame + cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtagtaccagctgccgagggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3057 3056 M02948:184:000000000-JK6TB:1:2110:12504:14087_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARGAHYYDSSGYYVDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgcgcgagaggagcccattactatgatagtagtggttattacgtggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtggaatccccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3058 3057 M02948:184:000000000-JK6TB:1:2110:12635:14202_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 1 8 8 20 8.8.20 [2.17.38.11] CARGFTWYQRIDNYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggtttacctggtaccagcggattgataactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3059 3058 M02948:184:000000000-JK6TB:1:2110:24206:15293_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD2-21*01 F 2 8 8 8 8.8.8 [3.17.38.11] CARHSQSDFW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattcccaaagcgatttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3060 3059 M02948:184:000000000-JK6TB:1:2110:22282:16084_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ1*01 F 188 84.62 44/52 nt Homsap IGHD1-14*01 ORF 1 8 7 11 8.7.11 [3.17.38.11] CARLYVTRGFQHW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagactttacgtaaccagggggttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3061 3060 M02948:184:000000000-JK6TB:1:2110:12111:16348_1:N productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1097 99.10 221/223 nt Homsap IGHJ5*02 F 174 82.35 42/51 nt Homsap IGHD5-12*01 F 2 9 7 9 9.7.9 [3.17.38.11] CARGRVRNDPW in-frame + cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcagggtacggaatgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3062 3061 M02948:184:000000000-JK6TB:1:2110:19190:17020_1:N unproductive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 2 8 8 X 8.8.X [2.17.38.11] CARDRSGEYQLPP##YYYYMDVW out-of-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatcgttcgggggagtaccagctgccacccccactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3063 3062 M02948:184:000000000-JK6TB:1:2110:23560:19067_1:N productive Homsap IGHV3-48*03 F 998 94.17 210/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-11*01 ORF 1 8 8 6 8.8.6 [3.17.38.11] CGVQYDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtggagtacagtatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3064 3063 M02948:184:000000000-JK6TB:1:2110:4856:19319_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 2 10 7 17 10.7.17 [3.17.38.11] CARHYYGSGSYPHTTDDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacattactatggttcggggagttacccgcacacaacggatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3065 3064 M02948:184:000000000-JK6TB:1:2110:22780:21994_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1068 98.63 216/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-9*01 F 1 8 8 21 8.8.21 [2.17.38.11] CARREGGNVLRYFDWLWDAFDIW in-frame + gcatctggatacaccttcaccagattctatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaacctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagagagggaggaaacgtattacgatattttgactggttatgggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3066 3065 M02948:184:000000000-JK6TB:1:2110:24248:23288_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-16*01 F 3 8 8 11 8.8.11 [3.17.38.11] CASVLVMGAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtgttttggttatgggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3067 3066 M02948:184:000000000-JK6TB:1:2110:14765:23393_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD4-23*01 ORF 2 8 8 20 8.8.20 [3.17.38.11] CARLGYGGNSERNYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgggttacggtggtaactccgaacgaaactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3068 3067 M02948:184:000000000-JK6TB:1:2109:21720:2581_1:N: productive Homsap IGHV1-2*04 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARPQYSSGPGFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagacctcagtatagcagtggacccggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3069 3068 M02948:184:000000000-JK6TB:1:2109:9019:2826_1:N:0 productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1064 98.18 216/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-18*01 F 3 9 9 10 9.9.10 [X.17.38.11] CVRGHNYAYEYW in-frame + ggacagtgtctctagcaacagtgttggttggcactggatcaggcagtccccatggagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaaaagtcgaataaccatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgtaagaggacacaactatgcttacgaatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 314 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3070 3069 M02948:184:000000000-JK6TB:1:2109:19147:4036_1:N: unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD5-24*01 ORF 3 8 8 15 8.8.15 [3.17.38.11] CARRRPTNAKVG*FDPW in-frame + rearranged sequence, stop codons aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggagacccactaatgccaaagttggctagttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3071 3070 M02948:184:000000000-JK6TB:1:2109:18088:4182_1:N: productive Homsap IGHV1-45*02 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD6-13*01 F 3 8 8 14 8.8.14 [2.17.38.11] CASVTQEVDYYGMDVW in-frame + gcttccggatacaccttcacctaccgctacctgcactgggtgcgacaggcccccggacaagcgcttgagtggatgggatggatcacacctttcaatggtaacaccaactacgcacagaaattccaggacagagtcaccattaccagggacaggtctatgagcacagcctacatggagctgagcagcctgagatctgaggacacagccatgtattactgtgcaagtgtgacgcaggaggtcgactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3072 3071 M02948:184:000000000-JK6TB:1:2109:14245:5810_1:N: productive Homsap IGHV3-48*03 F 1016 95.07 212/223 nt Homsap IGHJ6*02 F (see comment) 157 72.58 45/62 nt Homsap IGHD3-22*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARRMIGRSGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgtagcctctggattcacctttagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggactgggtttcatacattggttatactactactaccatatactacccagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaagaatgataggccgatcgggtatggacgtctggggccgagggaccacggtcatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3073 3072 M02948:184:000000000-JK6TB:1:2109:6991:6010_1:N:0 productive Homsap IGHV1-18*04 F 1095 100.00 219/219 nt Homsap IGHJ4*01 F, or Homsap IGHJ4*03 F (see comment) 168 83.33 40/48 nt Homsap IGHD5-24*01 ORF 3 8 8 17 8.8.17 [2.17.38.11] CARDLERGGDGYNYPFSYW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) gcttctggttacacctttaccagctacggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatctcgaacggggcggagatggctacaattaccctttttcctactggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3074 3073 M02948:184:000000000-JK6TB:1:2109:11197:6117_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1073 98.64 217/220 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD5-18*01 F 1 8 7 16 8.7.16 [3.17.38.11] CAKDHGTATVTAGALNIW in-frame + cactgtctctggtggctccatcagtagttactactggacctggatccggcagcccccagggaagggactggagtggattgggtatatctatcacagtgggagcaccaactacaatccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaaagatcacggtacagctacggttacggcaggtgctcttaatatctggggccaggggacaatggtcaccgtgtcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3075 3074 M02948:184:000000000-JK6TB:1:2109:19205:7678_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD4-23*01 ORF 3 8 8 10 8.8.10 [3.17.38.11] CATVVENWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgacggtggttgagaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3076 3075 M02948:184:000000000-JK6TB:1:2109:3447:8080_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*02 F 1 8 8 10 8.8.10 [3.17.38.11] CARWRGSHFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcaatgtatttgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagatggcgtgggagtcactttgactattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaccccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3077 3076 M02948:184:000000000-JK6TB:1:2109:14420:8251_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*01 F, or Homsap IGHJ4*03 F (see comment) 159 81.25 39/48 nt Homsap IGHD6-19*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKDLVALARHPLDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcttgtagctctggccaggcaccccttggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3078 3077 M02948:184:000000000-JK6TB:1:2109:2542:8678_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-12*01 F 3 8 8 18 8.8.18 [2.17.38.11] CATERGYSGYDRGTYYFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgaccgaacgtggatatagtggctacgatagagggacgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3079 3078 M02948:184:000000000-JK6TB:1:2109:4321:10142_1:N: productive Homsap IGHV3-7*01 F 1085 100.00 217/217 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [1.17.38.11] CARSSGSYYMPKPFDYW in-frame + ctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaagttcggggagttattatatgcccaaaccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 326 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3080 3079 M02948:184:000000000-JK6TB:1:2109:5104:10299_1:N: No rearrangement found Homsap IGHV4-38-2*02 F, or Homsap IGHV4-39*07 F (see comment) 1055 97.73 215/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found the submitted sequence and the closest germline V-GENE allele show different CDR1-IMGT amino acid lengths (8 AA in M02948:184:000000000-JK6TB:1:2109:5104:10299_1:N:; 9 AA in Homsap IGHV4-38-2*02): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cactgtctctggtggctccatcagtagttactactggagttggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 267 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3081 3080 M02948:184:000000000-JK6TB:1:2109:22363:11909_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 981 99.49 197/198 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-16*01 F 3 3 8 14 3.8.14 [X.17.38.11] CARDLGGRFRGVMNYW in-frame + agctactatatgcactgggtgcgacaggcccctggacaagggcttaagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatctcggcggccggtttcggggagttatgaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 304 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3082 3081 M02948:184:000000000-JK6TB:1:2109:8927:12509_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1092 99.10 220/222 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-13*01 F 2 8 8 18 8.8.18 [3.17.38.11] CATRIAAAGTVAYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactacccacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgacgcgtatagcagcagctggtactgtggcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3083 3082 M02948:184:000000000-JK6TB:1:2109:2484:12776_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-9*01 F 2 8 8 13 8.8.13 [2.17.38.11] CATDFSGYEGKFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagattttagtggttatgagggcaaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3084 3083 M02948:184:000000000-JK6TB:1:2109:19034:13031_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-24*01 ORF 3 8 7 7 8.7.7 [3.17.38.11] CAREEGDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagaagaaggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3085 3084 M02948:184:000000000-JK6TB:1:2109:7798:13979_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARHYDSSATEDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacactatgatagtagtgccacagaggattactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3086 3085 M02948:184:000000000-JK6TB:1:2109:13404:15006_1:N productive Homsap IGHV5-51*01 F 1208 98.79 244/247 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 183 84.31 43/51 nt Homsap IGHD4-23*01 ORF 2 8 8 14 8.8.14 [11.17.38.11] CASLPRSVTYGGMDSW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) cggggggtctctaaagatctactgtaagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagcctcccgagaagtgtgacctacggcggtatggactcttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3087 3086 M02948:184:000000000-JK6TB:1:2109:5446:15162_1:N: unproductive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ5*01 F 68 64.86 24/37 nt 8 8 X 8.8.X [3.17.38.11] CAKDR (see V-DOMAIN Functionality comment) out-of-frame + IMGT/JunctionAnalysis gives no results for this JUNCTION; TRP 118 not identified tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaactatcactggtagtggtgttaacacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcgcaatcgtctactaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3088 3087 M02948:184:000000000-JK6TB:1:2109:21048:15553_1:N productive Homsap IGHV3-30*04 F, or Homsap IGHV3-30*07 F or Homsap IGHV3-30-3*03 F 969 93.61 205/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD1-26*01 F 3 8 8 11 8.8.11 [2.17.38.11] CAREGSGSYWPHW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagtaataaatactacgtagactccgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagggtagtgggagttactggccccactggggccagggaaccctggtcactgtctcctcggggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3089 3088 M02948:184:000000000-JK6TB:1:2109:27980:15845_1:N productive Homsap IGHV3-11*01 F 1105 100.00 221/221 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 3 8 8 11 8.8.11 [2.17.38.11] CAREGVVYAFDIW in-frame + cagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagaaggggtggtttatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 349 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3090 3089 M02948:184:000000000-JK6TB:1:2109:9673:15896_1:N: unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD3-9*01 F 1 8 8 X 8.8.X [3.17.38.11] CARHGDLITIF*LAPRI##YYYYYMDVW out-of-frame + rearranged sequence, stop codons aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatggcgatcttattacgatattttgactggccccacgtataaaactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcgtccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 393 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3091 3090 M02948:184:000000000-JK6TB:1:2109:10444:16759_1:N productive Homsap IGHV3-11*01 F 1105 100.00 221/221 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD4-17*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARTGLRDYNWFDPW in-frame + cagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgaggactggactacgggattacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3092 3091 M02948:184:000000000-JK6TB:1:2109:24240:17116_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 2 8 7 11 8.7.11 [3.17.38.11] CARYGSGSRVDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggtatggttcggggagccgagttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3093 3092 M02948:184:000000000-JK6TB:1:2109:13017:17177_1:N unproductive (see comment) Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 3 8 8 X 8.8.X [2.17.38.11] CASIRTLTFLL***WLL#FDYW out-of-frame + rearranged sequence, stop codons gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagtattcggacgctgacgtttttactatgatagtagtggttattgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 373 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3094 3093 M02948:184:000000000-JK6TB:1:2109:20982:17341_1:N productive Homsap IGHV4-34*03 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD2-2*01 F 2 8 7 20 8.7.20 [3.17.38.11] CARDSSPLYCSSTSCYPGVDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctgggtccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatagttcccccctttattgtagtagtaccagctgctatcccggcgtggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3095 3094 M02948:184:000000000-JK6TB:1:2109:19621:17948_1:N productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-3*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAKSSSYDFWSGFDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaaagctccagctacgatttttggagtggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3096 3095 M02948:184:000000000-JK6TB:1:2109:20185:18055_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARGSSSWYVPFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaagcagcagctggtacgttccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3097 3096 M02948:184:000000000-JK6TB:1:2109:19975:18102_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARGRGDYGDYYRFDYW in-frame + other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagaggccgaggtgactacggtgactactatcgctttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3098 3097 M02948:184:000000000-JK6TB:1:2109:11880:18688_1:N productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDIPTGWFTDYW in-frame + tgcagcctctggattccccttcagtaacttctggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatcctgatgggagtggcacatcctacgcggactccgtgaagggccgattcaccatctccagggacaacgccaagaacacgctgtatctgcaaatgaacggtctgagagccgaggacacggctctgtattactgtgcaagagatatccccactggctggtttactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3099 3098 M02948:184:000000000-JK6TB:1:2109:8492:19227_1:N: productive Homsap IGHV3-30*03 F, or Homsap IGHV3-30*18 F or Homsap IGHV3-30-5*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 11 8.8.11 [3.17.38.11] CAKSGSSGWLVYW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagtaaaaaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgaaaagtggaagcagtggctggttggtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3100 3099 M02948:184:000000000-JK6TB:1:2109:5592:19974_1:N: productive Homsap IGHV3-7*03 F 1025 95.52 213/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-21*02 F 1 8 8 9 8.8.9 [3.17.38.11] CARGGLQGDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagggggactgcagggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3101 3100 M02948:184:000000000-JK6TB:1:2109:7575:20767_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 944 91.48 204/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 1 8 8 10 8.8.10 [3.17.38.11] CAPWILAHFDYW in-frame + cgtagcctctggattcacctttagcaactatgccatgagttgggtccgccaggctccagggaggggactggagtgggtctcaactattgatggtcctactgccaacacacactacgcagactccgtggagggccggttcaccatctccagagacaattccaagaacacgctctatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgctccgtggatattagctcattttgactactggggccagggaacgctggtcaccgtctcctcagggagtgcatccgccccaacccttttctccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3102 3101 M02948:184:000000000-JK6TB:1:2109:23271:21861_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1043 96.41 215/223 nt Homsap IGHJ6*03 F 241 89.83 53/59 nt Homsap IGHD2-2*02 F 2 8 8 11 8.8.11 [3.17.38.11] CARVFDTYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattcataggagtagtagtaacatatattacgcagactcactgaggggccgattcaccatctccagagacaacgccaagaactcactgtatctgcacatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagtcttcgatacctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcaaggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3103 3102 M02948:184:000000000-JK6TB:1:2109:16224:21862_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-26*01 F 1 8 7 14 8.7.14 [3.17.38.11] CARQGGVTGDDAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacaagggggggttactggggatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3104 3103 M02948:184:000000000-JK6TB:1:2109:12327:21947_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 962 92.38 206/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*01 F 3 8 8 9 8.8.9 [3.17.38.11] CANLMRIEDYW in-frame + tacaagttctggactcaccttcagtggccatagcatgagctgggtccgccaggctccagggaaggggctggaatgggtctcatccatcagtcatactagtggtgacatatactacgcagactcactgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaacttaatgcgcatagaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3105 3104 M02948:184:000000000-JK6TB:1:2109:25242:22058_1:N productive Homsap IGHV3-48*03 F 1126 99.56 226/227 nt Homsap IGHJ5*02 F 192 86.27 44/51 nt Homsap IGHD6-25*01 F 3 8 8 9 8.8.9 [4.17.38.11] CARGARLFDPW in-frame + cctgtgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggcgcccggctcttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 318 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3106 3105 M02948:184:000000000-JK6TB:1:2109:8248:22106_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARLGGYGDYNFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcggcggctacggtgactacaacttcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3107 3106 M02948:184:000000000-JK6TB:1:2109:13782:24475_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD4-11*01 ORF 2 8 8 20 8.8.20 [2.17.38.11] CARGPPHDYSKTNYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgggcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccccccgcatgactacagtaaaacaaactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgtccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3108 3107 M02948:184:000000000-JK6TB:1:2109:16443:24553_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-6*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARDPYSSSSGGFYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatccttatagcagctcgtccgggggtttctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatctccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3109 3108 M02948:184:000000000-JK6TB:1:2109:21296:25280_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-25*01 F 2 8 7 8 8.7.8 [3.17.38.11] CARGGIFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggggcatttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3110 3109 M02948:184:000000000-JK6TB:1:2108:7372:4066_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD1-26*01 F 3 8 8 18 8.8.18 [3.17.38.11] CAKVRGSFTLSYYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtacgtgggagctttaccctttcttactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttcaccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3111 3110 M02948:184:000000000-JK6TB:1:2108:14786:5000_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 978 94.06 206/219 nt Homsap IGHJ4*02 F 193 93.18 41/44 nt 8 8 5 8.8.5 [2.17.38.11] CASLDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtctggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3112 3111 M02948:184:000000000-JK6TB:1:2108:17386:7431_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-3*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARGAYDFWSGKGYYYYMDVW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggtgcatacgatttttggagtggcaaggggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3113 3112 M02948:184:000000000-JK6TB:1:2108:19662:7984_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 3 8 7 12 8.7.12 [3.17.38.11] CARGDEIVVVFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggagatcaatcatagtggaagcaccaactacaacccgtccctcgagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcgacgagatagtagtggtttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3114 3113 M02948:184:000000000-JK6TB:1:2108:17143:8396_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3115 3114 M02948:184:000000000-JK6TB:1:2108:16932:8846_1:N: productive Homsap IGHV4-59*12 (F), or Homsap IGHV4-61*05 F 1028 96.36 212/220 nt Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD3-16*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARVAGGTFGGVDQW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacagcccgtccctcaagagtcgagtcaccatatcagtagacaagtcgaagaaccagttctccgtgaggctgaactctgcgaccgccgcggacacggccgtgtattactgtgcgagagttgcgggaggaacgtttgggggtgtcgaccagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3116 3115 M02948:184:000000000-JK6TB:1:2108:15165:9618_1:N: productive Homsap IGHV4-61*01 F 1112 99.12 224/226 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-9*01 F 1 10 7 22 10.7.22 [3.17.38.11] CARVPRYFEWPRPTNYYYYFMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagtcactactggagttggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtgccacgatattttgaatggccgagacctactaactactactactacttcatggacgtctggggcaaagggaccacgctcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3117 3116 M02948:184:000000000-JK6TB:1:2108:8694:9851_1:N:0 productive Homsap IGHV3-7*03 F 1007 94.62 211/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-25*01 F 1 8 8 9 8.8.9 [3.17.38.11] CARYNTGFDPW in-frame + tgcagtctctggattcacatttagtgccaattggatgacctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagagttattatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctacaaatgaacagcctgacagccgaggacacggccgtctattactgtgccagatacaataccggattcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3118 3117 M02948:184:000000000-JK6TB:1:2108:12605:10013_1:N unproductive (see comment) Homsap IGHV4-34*03 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-21*02 F 2 8 7 14 8.7.14 [3.17.38.11] CATGLAYCGGDCYYYW in-frame + rearranged sequence, stop codons cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtagattggggaaatcaatcatagtggaagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaccggtctagcatattgtggtggtgactgctattactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3119 3118 M02948:184:000000000-JK6TB:1:2108:22365:10416_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARGEYQLPLRDYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggagtaccagctgcccctgagagactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3120 3119 M02948:184:000000000-JK6TB:1:2108:8071:10668_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*02 F 3 8 8 15 8.8.15 [3.17.38.11] CAKDISRTYYYYAMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagctgaggacacggccgtgtattactgtgcaaaagatattagcaggacctactactactacgctatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3121 3120 M02948:184:000000000-JK6TB:1:2108:25092:11954_1:N productive Homsap IGHV3-48*04 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD5-12*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARDQDWILGGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgtgcgagagatcaagattggatcctggggggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3122 3121 M02948:184:000000000-JK6TB:1:2108:18960:14455_1:N unproductive Homsap IGHV1-8*01 F 1077 99.09 217/219 nt Homsap IGHJ3*01 F (see comment) 160 80.00 40/50 nt Homsap IGHD2-15*01 F 3 8 8 X 8.8.X [2.17.38.11] CASQNGVRSGVPYCSGGSCYWH#DVW out-of-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacatggctgtgtattactgtgcgagccagaacggggtacgatcgggggttccatattgtagtggtggtagctgctactggcatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3123 3122 M02948:184:000000000-JK6TB:1:2108:15815:14502_1:N productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-15*01 F 3 8 8 21 8.8.21 [2.17.38.11] CARGDFVVVVAATEYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggggactttgtagtggtggtagctgctactgagtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3124 3123 M02948:184:000000000-JK6TB:1:2108:8811:14523_1:N: unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1038 96.40 214/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 3 8 8 X 8.8.X [3.17.38.11] CAREIKYCSGGSCY#YCDYW out-of-frame + rearranged sequence, stop codons aagggttctggatacagctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccacatacagcccgtcattccagggccaggtcaccatctcagccgacaggtccatcaacaccgcccacctgcagtggggcagcctgaaggcctcggacaccgccatgtattactgtgcgagagagatcaaatattgtagtggtggtagctgctacttattgtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3125 3124 M02948:184:000000000-JK6TB:1:2108:19672:14850_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-17*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARVSGDYYFDYW in-frame + cagggttctggatacagctttagcagctactggatcggctgggtgcgccagatgcccgggaaagccctggagtggatggggatcatctatccaggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcaacaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagtctccggtgactactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3126 3125 M02948:184:000000000-JK6TB:1:2108:18952:15156_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARPVSDDFWSGTYGYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccggtaagcgacgatttttggagtggtacctatggctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3127 3126 M02948:184:000000000-JK6TB:1:2108:19129:15173_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 1 8 8 13 8.8.13 [3.17.38.11] CAKYYRGSWYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatactataggggcagctggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3128 3127 M02948:184:000000000-JK6TB:1:2108:23242:15574_1:N productive Homsap IGHV4-61*05 F 1085 97.79 221/226 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 10 7 17 10.7.17 [3.17.38.11] CAKVGTTITTYYYHYMDVW in-frame + cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtatattactgtgcgaaagtggggactacaataactacgtactactatcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3129 3128 M02948:184:000000000-JK6TB:1:2108:23206:16197_1:N unproductive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 2 8 8 X 8.8.X [2.17.38.11] CARQQFIVVASHVLRFLEWLFSPP#YYYGMDVW out-of-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggcaacaatttattgtagtagctagccatgtattacgatttttggagtggttattttcaccccctctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctatgagaattcccctcgcgatat 0 0 405 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3130 3129 M02948:184:000000000-JK6TB:1:2108:9912:20937_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*04 F 234 85.71 54/63 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARAGDSGSYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgggggatagtgggagctactacggcatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3131 3130 M02948:184:000000000-JK6TB:1:2108:18810:21290_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 183 84.31 43/51 nt Homsap IGHD5-24*01 ORF 3 8 8 9 8.8.9 [2.17.38.11] CATQGDGYNPW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacacaaggagatggctacaacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3132 3131 M02948:184:000000000-JK6TB:1:2108:9988:21585_1:N: productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD2-21*02 F 2 8 8 14 8.8.14 [2.17.38.11] CARAGDQRLEWYFDLW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccatatattactgtgcgagagcgggtgaccaacgtctcgagtggtacttcgatctctggggccgtggcacccaggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3133 3132 M02948:184:000000000-JK6TB:1:2108:26345:21802_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD6-19*01 F 2 8 8 18 8.8.18 [3.17.38.11] CAREGIAVAGTGRQDAFDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgcagtatctgcaaatgaatagcctgagagtcgaggacacggccgtatattactgtgcgagagagggtatagcagtggctggcacggggcgccaagatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctccggtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3134 3133 M02948:184:000000000-JK6TB:1:2108:7198:21874_1:N: productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggaatgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3135 3134 M02948:184:000000000-JK6TB:1:2108:8300:22005_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1050 97.72 214/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARDKASRIAVAGKGLDYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctatatggagctgaggagcctgagatctgacgacacggccgtgtattattgtgcgagagataaggcgtcgcggatagcagtggctggtaaggggcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3136 3135 M02948:184:000000000-JK6TB:1:2108:18211:24506_1:N unproductive (see comment) Homsap IGHV1-18*01 F 1090 100.00 218/218 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 8 8 X 8.8.X [1.17.38.11] CARGG*L**YQLP#FDYW out-of-frame + rearranged sequence, stop codons cttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggcggctaattgtagtagtaccagctgcccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3137 3136 M02948:184:000000000-JK6TB:1:2108:15759:24639_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARRVGIAAAGYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgtgtgggtatagcagcagctggctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3138 3137 M02948:184:000000000-JK6TB:1:2106:17574:2550_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1136 95.55 236/247 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 8 8 10 8.8.10 [11.17.38.11] CARQGGSYFDYW in-frame + aggggggtatctgaagatctcctgtaaggggtctggatacagctttaccacctactggatcgcctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatgctggtgactctgataccagatacagcccgtccttccaaggccacgtcaccatctcagccgacaagtccagcaccaccgcctatctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaaggtgggagctattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3139 3138 M02948:184:000000000-JK6TB:1:2106:20420:3280_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-11*01 ORF 1 8 8 11 8.8.11 [2.17.38.11] CASGLTLHHIDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcgggttgacactacaccatattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3140 3139 M02948:184:000000000-JK6TB:1:2106:14758:3526_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD4-23*01 ORF 2 8 7 16 8.7.16 [3.17.38.11] CARHPNYGGYYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacatcctaactacggggggtactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3141 3140 M02948:184:000000000-JK6TB:1:2106:16194:7457_1:N: No rearrangement found Homsap IGHV4-34*03 F 1086 99.54 218/219 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagatagcggtgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 295 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3142 3141 M02948:184:000000000-JK6TB:1:2106:13157:8184_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 8 17 8.8.17 [3.17.38.11] CTKVNGRRAVTGTGCSDYW in-frame + tgcagtctctggattcacctttagtaacaatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtgatagtggtggtagcacatactatgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacactctgtatctgctaatgaacagtctgagagccgaggacacggccgtgtattactgtacgaaagttaacgggcgaagagcagtaactggtacggggtgttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtggaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3143 3142 M02948:184:000000000-JK6TB:1:2106:15283:8423_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD2-2*01 F 2 8 7 9 8.7.9 [3.17.38.11] CARLYNWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccatgtattactgtgcgagactctataactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3144 3143 M02948:184:000000000-JK6TB:1:2106:25072:9981_1:N: No rearrangement found Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 278 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3145 3144 M02948:184:000000000-JK6TB:1:2106:4150:9992_1:N:0 productive Homsap IGHV3-7*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARFIQGVAATDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaactgagaaatactatgtggactcagtgaagggccgattcaccatctccagagacaacaccaaggactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgtgcgagatttattcagggggtagctgccactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3146 3145 M02948:184:000000000-JK6TB:1:2106:28204:10229_1:N productive Homsap IGHV4-61*01 F 1058 96.46 218/226 nt Homsap IGHJ5*02 F 156 78.43 40/51 nt Homsap IGHD6-19*01 F 1 10 7 11 10.7.11 [3.17.38.11] CARGARSSGWTAW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagaggcgcccgtagcagtggctggacagcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3147 3146 M02948:184:000000000-JK6TB:1:2106:23309:10444_1:N productive Homsap IGHV3-9*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKDIGAIVVVSGFDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagatacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatataggcgctatagtagtggttagtggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaggattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3148 3147 M02948:184:000000000-JK6TB:1:2106:16597:10850_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ3*01 F, or Homsap IGHJ6*02 F or Homsap IGHJ6*03 F (see comment) 160 80.00 40/50 nt Homsap IGHD5-24*01 ORF 1 8 8 11 8.8.11 [3.17.38.11] CARVSWRASMDVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagtttcatggagggcttcaatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3149 3148 M02948:184:000000000-JK6TB:1:2106:4808:12680_1:N: productive Homsap IGHV4-59*12 (F) 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 2 8 7 10 8.7.10 [3.17.38.11] CARVVADLFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagtcgtggctgacctatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3150 3149 M02948:184:000000000-JK6TB:1:2106:4092:12819_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [2.17.38.11] CATGSGYYDSSGYYNYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagggtctggttactatgatagtagtggttattacaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3151 3150 M02948:184:000000000-JK6TB:1:2106:18702:13050_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARYHDSSGYGAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagataccatgatagtagtggttatggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3152 3151 M02948:184:000000000-JK6TB:1:2106:11221:13266_1:N productive (see comment) Homsap IGHV3-64*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 130 77.27 34/44 nt 8 8 5 8.8.5 [3.17.38.11] CASSSCF (see V-DOMAIN Functionality comment) in-frame + IMGT/JunctionAnalysis gives no results for this JUNCTION; TRP 118 not identified tgcagcctctggattcacctttagtatctatgctatgcactgggtccgccaggctccagggaagggactggaatatgtttcaggtattagtactaatgggggttacacatcttacgcaaactctgtgaagggcagattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgggcagcctgaaacctgaggacatggctgtgtattattgtgcgagttcatcttgttttggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3153 3152 M02948:184:000000000-JK6TB:1:2106:7016:13345_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-9*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARRATHVLSGSNDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaagggctacccacgttttgtccggttctaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3154 3153 M02948:184:000000000-JK6TB:1:2106:20491:13736_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-18*01 F 2 10 7 13 10.7.13 [3.17.38.11] CARVDKLWLPRQDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtggataagctatggttacccagacaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3155 3154 M02948:184:000000000-JK6TB:1:2106:23006:13778_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARERSGWSYYGMDVW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaaagaagtggctggagctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3156 3155 M02948:184:000000000-JK6TB:1:2106:25742:14176_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-15*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARDSAVAGSCYFGADYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggcatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattctgcagtggctggtagctgctactttggggctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3157 3156 M02948:184:000000000-JK6TB:1:2106:11728:14537_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-26*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARHVTPIEWVAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgttactccaatagagtgggttgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatcccctcgcgatat 0 0 358 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3158 3157 M02948:184:000000000-JK6TB:1:2106:2137:14672_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 2 8 8 9 8.8.9 [2.17.38.11] CARGRDAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaggggtagggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3159 3158 M02948:184:000000000-JK6TB:1:2106:19932:14729_1:N productive Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARVAPYYYDSSGPGGYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgatcagcctgagagccgaggacacggccgtgtattactgtgcgagagtcgcgccctattactatgatagtagtggtccagggggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3160 3159 M02948:184:000000000-JK6TB:1:2106:21866:16168_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-10*01 F 2 8 8 17 8.8.17 [3.17.38.11] CATQVHYYGSGRADAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgacacaggttcattactatggttcgggcagggccgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3161 3160 M02948:184:000000000-JK6TB:1:2106:13935:16550_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARYDSAQVRGGDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagatacgattcggcccaagttagaggaggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3162 3161 M02948:184:000000000-JK6TB:1:2106:13502:17099_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 3 8 8 16 8.8.16 [3.17.38.11] CIIRITMVRGVMDRADYW in-frame + tgcagtctctggattcacctttagcagctatggcatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgcattatccggattactatggttcggggagttatggaccgggcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3163 3162 M02948:184:000000000-JK6TB:1:2106:14556:18143_1:N productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARGIAVAGSVSDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggtatagcagtggctggtagcgtaagcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3164 3163 M02948:184:000000000-JK6TB:1:2106:17693:18756_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-17*01 F 2 8 8 15 8.8.15 [2.17.38.11] CATEDPYYGDYVAFDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagaggacccttactacggtgactacgtcgcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3165 3164 M02948:184:000000000-JK6TB:1:2106:13860:18761_1:N productive Homsap IGHV4-39*01 F, or Homsap IGHV4-39*05 F or Homsap IGHV4-39*08 (F) 1121 99.56 225/226 nt Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD3-16*01 F 3 10 7 13 10.7.13 [3.17.38.11] CARFGGDTIGGVDQW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattgggagtatctattatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagatttgggggagatacgattgggggtgtcgaccagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3166 3165 M02948:184:000000000-JK6TB:1:2106:8581:18818_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [2.17.38.11] CATAGDEAVAWKYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagccggggatgaagcagtggcctggaagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3167 3166 M02948:184:000000000-JK6TB:1:2106:4670:18837_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD4-11*01 ORF 3 8 8 17 8.8.17 [3.17.38.11] CARLTVTTRYYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcacagtaactacccgttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3168 3167 M02948:184:000000000-JK6TB:1:2106:4470:19965_1:N: unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-16*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARSSTDLWFGEYW in-frame + rearranged sequence, stop codons aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgtagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatcctcgaccgacttatggttcggggagtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3169 3168 M02948:184:000000000-JK6TB:1:2106:9554:20555_1:N: productive Homsap IGHV1-2*02 F, or Homsap IGHV1-2*03 F 855 100.00 171/171 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 2 X 8 16 X.8.16 [X.11.38.11] CARIDTGYYYGSGNGDYW in-frame + gcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaatcgacaccggttattactatggttcggggaatggcgactactggggccagggaaccctggtcaccgtctcctcagggagtacatccgccccaacccttttccccc 0 0 283 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3170 3169 M02948:184:000000000-JK6TB:1:2106:24726:20847_1:N No rearrangement found Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagaaccggcaacggggatggtagcagctggttaccctcgcgatat 0 0 267 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3171 3170 M02948:184:000000000-JK6TB:1:2106:24543:22040_1:N No rearrangement found Homsap IGHV3-9*01 F 971 92.83 207/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcacctttagcaactatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagttggaacaatgatcacataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctacaaatgaacagtctgagagctgaggacacggccttgtattactgtgtaaggtctcgttcaactggagcgacgttgaccaggagcttcgaccccagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatttccctcgcgatat 0 0 334 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3172 3171 M02948:184:000000000-JK6TB:1:2106:22190:22399_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 1 8 8 12 8.8.12 [3.17.38.11] CANGRYSSSEYDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattggtggtagtggtgctaacacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacgcgctgtatctgcaaatgaacaacctgagagccgaggacacggccgtatattactgtgcgaatggcaggtatagcagtagcgaatatgactattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3173 3172 M02948:184:000000000-JK6TB:1:2106:12767:22582_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F or Homsap IGHV5-51*04 F 975 93.24 207/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD5-18*01 F 1 8 8 8 8.8.8 [3.17.38.11] CARRGSADYW in-frame + aagggttctggatacagttttgtcgactattggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatccctcctggtgactctgacatcagatacagcccgtccttccaaggccaggtcaccatgtcagtcgacaaggccatcaacaccgcctacctgcagtggaacagcctgaaggcctcggacaccgccatgtattactgtgcgagacggggttcggccgactactggggccagggaactctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3174 3173 M02948:184:000000000-JK6TB:1:2106:10582:22886_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 220 90.57 48/53 nt Homsap IGHD7-27*01 F 1 8 8 9 8.8.9 [2.17.38.11] CATARYGMDVW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagctaggtacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3175 3174 M02948:184:000000000-JK6TB:1:2106:6844:23752_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAVISSGDTYDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcggtaataagcagtggcgatacctatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3176 3175 M02948:184:000000000-JK6TB:1:2107:12226:3004_1:N: No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttatcacctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccaggtacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagaggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaacctgactcgtagtggtgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 307 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3177 3176 M02948:184:000000000-JK6TB:1:2107:6946:3035_1:N:0 productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1037 96.82 213/220 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-2*02 F 3 8 7 15 8.7.15 [3.17.38.11] CARELRAAIHYYGMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaggaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagagctccgggctgccatacactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3178 3177 M02948:184:000000000-JK6TB:1:2107:13564:3387_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1190 97.98 242/247 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [11.17.38.11] CARRGTVGFYGMDVW in-frame + aggggagtatctagagatctcctgtaagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgtggaacagtagggttctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3179 3178 M02948:184:000000000-JK6TB:1:2107:5473:4282_1:N:0 productive Homsap IGHV5-51*01 F 1199 98.38 243/247 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-10*02 F 1 8 8 18 8.8.18 [11.17.38.11] CARHVQLSSQRLYYYYMDVW in-frame + cggggagtctctgaagatttactttaagggttctggctacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtacagctatcttctcaacgattgtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3180 3179 M02948:184:000000000-JK6TB:1:2107:7341:4939_1:N:0 productive Homsap IGHV4-61*01 F 1121 99.56 225/226 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-7*01 F 1 10 7 10 10.7.10 [3.17.38.11] CARERTGTIGYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttccccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaagaactggaactattggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccatcgtctcctgtgagaagtcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3181 3180 M02948:184:000000000-JK6TB:1:2107:15761:7903_1:N: productive Homsap IGHV3-33*03 F, or Homsap IGHV3-33*08 F 998 94.17 210/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARDVGYCSSTSCALYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctagagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagtctgagagccgaggacacggccgtgtattactgtgcgagagatgtgggatattgtagtagtaccagctgcgcgctctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3182 3181 M02948:184:000000000-JK6TB:1:2107:18672:7908_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 1034 95.96 214/223 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAREGVYCSGGSCYLAAFDIW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccaggggaggggctggtgtgggtctcacgtattaagagtgatgagagtagtataaggtatgcggactccgtgaagggccgattcaccatctccagagacaacggcaagaacacggtgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagagggggtatattgtagtggtggtagctgttacctggccgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3183 3182 M02948:184:000000000-JK6TB:1:2107:25622:8039_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1171 97.55 239/245 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD5-12*01 F 3 8 7 16 8.7.16 [11.17.38.11] CATYGGYGDYEEYYFDYW in-frame + ctgcgggacccctgtccctcaccggcgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgacttatggggggtacggtgactacgaggagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3184 3183 M02948:184:000000000-JK6TB:1:2107:22003:8437_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAKTLGYCSGTSCRYYYMDVW in-frame + tgcagcctctggattcacctttatcagttatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatctattagtggtagtggtggtagcacaaactacgcagactccgtgaagggccggttcaccatctccagagacaataccaagaacacggtgcatctgcaaatgaacagcctgagaggcgacgacacggccgtatattactgtgcgaaaacgttagggtattgtagtggtaccagctgccggtactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3185 3184 M02948:184:000000000-JK6TB:1:2107:18313:9442_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARRYYYDSSGSSSYGMDVW in-frame + aagggttctggatacagttttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgatattactatgatagtagtggttcaagcagctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3186 3185 M02948:184:000000000-JK6TB:1:2107:15842:9712_1:N: productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARAVGVDHPFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggaatgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagccgttggagtggaccacccctttgactactggggccagagaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3187 3186 M02948:184:000000000-JK6TB:1:2107:11823:10304_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F (see comment) 545 83.77 129/154 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-13*01 F 1 X 8 20 X.8.20 [X.5.38.11] CARGKADIGRWIVAIAGAFDIW in-frame + low V-REGION identity (83.77%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cgctgtctctggtggctccatcagcagtggtggttccacaagttacgcacagaagtaccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgacgtctgaggacacggccgtgtattactgtgcgagaggcaaggctgatatcgggcgctggatagtagccatcgcaggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 309 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3188 3187 M02948:184:000000000-JK6TB:1:2107:27677:11250_1:N unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD3-3*01 F 1 8 8 X 8.8.X [2.17.38.11] CARGGLQYYDF*P#YYYMDVW out-of-frame + rearranged sequence, stop codons gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaggccttcagtattacgatttttgacccggtactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3189 3188 M02948:184:000000000-JK6TB:1:2107:16401:11392_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-18*01 F 2 8 8 13 8.8.13 [2.17.38.11] CATAIQLWLDAFDIW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagcgatacagctatggctcgatgcttttgatatctggggccaagggacaatgatcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3190 3189 M02948:184:000000000-JK6TB:1:2107:5317:12747_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1096 99.55 220/221 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD5-24*01 ORF 1 8 8 12 8.8.12 [2.17.38.11] CARMAGYYYYMDVW in-frame + cagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgaggatggcgggctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 352 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3191 3190 M02948:184:000000000-JK6TB:1:2107:11210:12873_1:N productive Homsap IGHV1-8*02 F 1050 97.72 214/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARWTTSNFWSGYHYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatggaccacctcgaatttttggagtggttatcactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3192 3191 M02948:184:000000000-JK6TB:1:2107:17190:13140_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1206 99.59 242/243 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD5-18*01 F 3 8 8 21 8.8.21 [10.17.38.11] CAREGYSYGYSLGYYYYYGMDVW in-frame + gggtccctgagactctcctgtgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagagggatacagctatggttactccctcggttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3193 3192 M02948:184:000000000-JK6TB:1:2107:18548:14051_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-7*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARTGITEYYFDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaactggaattactgagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3194 3193 M02948:184:000000000-JK6TB:1:2107:25117:14271_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-3*01 F 3 8 8 22 8.8.22 [2.17.38.11] CARGSDLITIFGVVTDHHHWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagggtccgacctgattacgatttttggagtggttaccgaccaccaccactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3195 3194 M02948:184:000000000-JK6TB:1:2107:5419:14323_1:N: productive Homsap IGHV1-69*13 F 1184 98.36 240/244 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-8*02 F 2 8 8 10 8.8.10 [10.17.38.11] CARDTGTERDYW in-frame + ggcctcagtgaaatgctcctgcaaggcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatactggtacagagcgggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3196 3195 M02948:184:000000000-JK6TB:1:2107:17401:14387_1:N productive Homsap IGHV3-30*01 F 1106 99.55 222/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD6-19*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARDYEAVAGTWFDPW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagaggtgaggacacggctgtgtattactgtgcgagagattacgaagcagtggctggtacctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3197 3196 M02948:184:000000000-JK6TB:1:2107:17632:14423_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-16*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARGVGGGNFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcccgaggagtcgggggtggtaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3198 3197 M02948:184:000000000-JK6TB:1:2107:7877:15356_1:N: productive Homsap IGHV1-8*02 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-14*01 ORF 3 8 8 14 8.8.14 [2.17.38.11] CARGRFQKGRYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccggttccagaaaggaagatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3199 3198 M02948:184:000000000-JK6TB:1:2107:16846:15800_1:N productive Homsap IGHV3-7*01 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CVASLSGWYNDGMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtctatcactgtgttgctagtctcagtggctggtacaacgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3200 3199 M02948:184:000000000-JK6TB:1:2107:13008:15842_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1073 98.64 217/220 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-22*01 F 2 8 7 18 8.7.18 [3.17.38.11] CAKDGPNYDSNLAFHPSLDW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagacggcccgaactatgatagtaatttggcgtttcacccgtcccttgattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3201 3200 M02948:184:000000000-JK6TB:1:2107:7286:15926_1:N: productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARELPYCSGGSCYSIDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagaacttccatattgtagtggtggtagctgctactcgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcacccgccccaacccttttccccctcgtctcctggagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3202 3201 M02948:184:000000000-JK6TB:1:2107:25828:16989_1:N No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F (see comment) 530 70.85 158/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found low V-REGION identity (70.85%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtatattactgtgcgagtaacaattacgattttatcccgcgagaggtgtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 288 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3203 3202 M02948:184:000000000-JK6TB:1:2107:2789:17254_1:N: productive Homsap IGHV3-7*03 F 935 91.03 203/223 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD5-12*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDGFRGAYYYYMDVW in-frame + other possibilities: Homsap IGHJ6*04 and Homsap IGHJ6*01 (highest number of consecutive identical nucleotides) tgcagcctctggattcccttttagtgactattggatgacttgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaggtcgatggaagtgagcaatactacgcggactctgtaaagggccgattcaccatctccagagacaacgccaacaacttaatttatctgcaaatgaacagcctgagagacgaggacacggccgtgtattgttgtgcgagggatggtttcagaggcgcatattattactatatggacgtctggggcacagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccacctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3204 3203 M02948:184:000000000-JK6TB:1:2107:2346:17287_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-1*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARETGTTDYGNDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaaactggaacgacggactacggtaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccacctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3205 3204 M02948:184:000000000-JK6TB:1:2107:11420:18380_1:N unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARVGSYYYYGMDVW in-frame + rearranged sequence, stop codons gcttctggttaaacctttaccagctatggtatcacctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtagggagctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3206 3205 M02948:184:000000000-JK6TB:1:2107:25407:19367_1:N productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) or Homsap IGHV4-4*10 (F) 699 89.08 155/174 nt Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD3-16*01 F 3 X 7 13 X.7.13 [X.13.38.11] CARVAGGTFGGVDQW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) ctgcaggaccttccctgggggctggagtggattggggaaatctatcattctgggagcaccaactacagcccgtccctcaagagtcgagtcaccatatcagtagacaagtcgaagaaccagttctccgtgaggctgaactctgcgaccgccgcggacacggccgtgtattactgtgcgagagttgcgggaggaacgtttgggggtgtcgaccagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 277 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3207 3206 M02948:184:000000000-JK6TB:1:2107:13171:20415_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-16*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARDQDYYHDAFDIW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagatcaggattactatcatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3208 3207 M02948:184:000000000-JK6TB:1:2107:10508:20472_1:N productive Homsap IGHV4-39*07 F 1121 99.56 225/226 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-13*01 F 1 10 7 15 10.7.15 [3.17.38.11] CAITYSSSWYDATFDIW in-frame + cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattgggagtatctattatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgattacgtatagcagcagctggtacgatgctacttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3209 3208 M02948:184:000000000-JK6TB:1:2107:25333:22460_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1195 97.98 243/248 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD2-15*01 F 2 8 8 22 8.8.22 [11.17.38.11] CAKGYCSGGSCYPDWYYYYYMDVW in-frame + ctgcgggaaccctgagaatctccggtgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggtattgtagtggtggtagctgctaccccgattggtactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3210 3209 M02948:184:000000000-JK6TB:1:2107:9699:24004_1:N: productive Homsap IGHV7-4-1*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD5-18*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARVYPLDTAMVRPYYW in-frame + gcttctggatacaccttcactagctatgctatgaattgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaacaccaacactgggaacccaacgtatgcccagggcttcacaggacggtttgtcttctccttggacacctctgtcagcacggcatatctgcagatcagcagcctaaaggctgaggacactgccgtgtattactgtgcgagagtttaccctctggatacagctatggttagaccttactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3211 3210 M02948:184:000000000-JK6TB:1:2104:10935:2297_1:N: productive Homsap IGHV3-33*08 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGSVGDSGSWTEW in-frame + tgcagcctctggattcacctttagcagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggggatccgtcggggacagtgggagctggacagaatggggccagggaacccaggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3212 3211 M02948:184:000000000-JK6TB:1:2104:22296:4208_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F or Homsap IGHV3-53*03 F (see comment) 902 90.00 198/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAKARSWELPDPFDYW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (8 AA in M02948:184:000000000-JK6TB:1:2104:22296:4208_1:N:; 7 AA in Homsap IGHV3-53*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctgggttcatcgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattggtattagtggtgatagtacatactacgcagactctctgaagggccggttcagcatatccagagacaattccaagaacacggtgtatctgcaaatgagcagcctgggcgtcgaagacacggccgtatattactgtgcgaaagcgaggtcgtgggagctcccggacccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3213 3212 M02948:184:000000000-JK6TB:1:2104:6157:6958_1:N:0 productive Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattggtagtagtggcaataccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3214 3213 M02948:184:000000000-JK6TB:1:2104:13531:7198_1:N: productive (see comment) Homsap IGHV1-8*02 F 1027 96.79 211/218 nt 96.33 210/218 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-2*02 F 2 8 8 19 8.8.19 [2.16.38.11] CARPDIPTLDGYYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 46 of V-REGION: 1 nucleotides (from position 52 in the user submitted sequence), (cause frameshift) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggccccggacaagggcttgagtggatgggatggatgaaccctaacagtggtagcacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacccgatattcccaccttagatggttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaaacctttgccccctcgtctcctgtgagaattcccctcgcgatat 0 0 370 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3215 3214 M02948:184:000000000-JK6TB:1:2104:6038:7716_1:N:0 productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAREARRLAVAGNWFDPW in-frame + tgcagcctctggattcaccttcagtaattatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccgagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaggcacggagattagcagtggctggtaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttcccccctcgtctcctgtgagaatccccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3216 3215 M02948:184:000000000-JK6TB:1:2104:14013:8518_1:N: productive Homsap IGHV4-38-2*01 F 1070 97.76 218/223 nt Homsap IGHJ6*03 F 202 80.65 50/62 nt Homsap IGHD3-3*01 F 2 9 7 12 9.7.12 [3.17.38.11] CARVDYDFWTMDVW in-frame + cgctgtctctggttactccatgagcagtggttactattggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacatccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtagattacgatttttggaccatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3217 3216 M02948:184:000000000-JK6TB:1:2104:17327:9479_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-16*01 F 1 8 8 24 8.8.24 [3.17.38.11] CARGPPPGGVGERTTLLYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggtccccctcccgggggtgtgggggaacgaactacgctcttatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3218 3217 M02948:184:000000000-JK6TB:1:2104:19293:11536_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARAEVRGVSDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagctgaggttcggggagtttcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3219 3218 M02948:184:000000000-JK6TB:1:2104:29284:13705_1:N productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1025 95.52 213/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-23*01 ORF 2 9 7 12 9.7.12 [3.17.38.11] CARVGYSGNPLDYW in-frame + cactgtctctggtgactccataagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggaatggattggggaaatctatcatagtgggagcagcacctacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaggaaccagttctccctgaggctgacctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtaggctatagtgggaaccccctagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3220 3219 M02948:184:000000000-JK6TB:1:2104:7311:14663_1:N: productive Homsap IGHV3-11*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 3 8 8 12 8.8.12 [3.17.38.11] CASHYGYSYGVDYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagccactacggatacagctatggtgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3221 3220 M02948:184:000000000-JK6TB:1:2104:15538:14857_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-24*01 ORF 3 8 8 12 8.8.12 [3.17.38.11] CARGVGYNPYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggggttggctacaatccttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3222 3221 M02948:184:000000000-JK6TB:1:2104:22786:15626_1:N productive Homsap IGHV1-2*02 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [2.17.38.11] CAYSGSYSGVFDYW in-frame + gcatctggatacaccttcactagctatgctatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcctatagtgggagctactcgggcgtttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3223 3222 M02948:184:000000000-JK6TB:1:2104:12462:16197_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [3.17.38.11] CAKEGVVAVAGTG in-frame + TRP 118 not identified tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagaaggggtggtagcagtggctggtaccgggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3224 3223 M02948:184:000000000-JK6TB:1:2104:28379:16511_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-10*01 F 2 10 7 23 10.7.23 [3.17.38.11] CARLGSTSSAHYGSGLFHYYYMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagactcggttctacctcctcggcacactatggttcggggttgtttcactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 390 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3225 3224 M02948:184:000000000-JK6TB:1:2104:19067:17386_1:N No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1055 97.73 215/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtacctcgataagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 284 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3226 3225 M02948:184:000000000-JK6TB:1:2104:23553:17707_1:N productive Homsap IGHV3-9*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-21*01 F 3 8 8 10 8.8.10 [3.17.38.11] CAKDILGMKPYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggtatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatattctggggatgaagccctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3227 3226 M02948:184:000000000-JK6TB:1:2104:7714:17937_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARPGVRGIADYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaggcccggggttcggggaatagctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3228 3227 M02948:184:000000000-JK6TB:1:2104:12529:18171_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD6-13*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARHARSSWTHNWFDPW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgcgcgcagcagctggacccacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3229 3228 M02948:184:000000000-JK6TB:1:2104:24092:18605_1:N productive Homsap IGHV4-38-2*01 F 1043 96.41 215/223 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD5-18*01 F 3 9 7 18 9.7.18 [3.17.38.11] CARVGAGRYSYYYYYYMDVW in-frame + cgctgtctctggttactccatcaccagtggttacgactggggctggatccggcagcccccagggcaggggctggagtggattgggaatatctatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagtcggggcggggcgatacagctactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3230 3229 M02948:184:000000000-JK6TB:1:2104:16400:18666_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-6*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARMAARMDYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtagctctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggatggcagctcgcatggactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3231 3230 M02948:184:000000000-JK6TB:1:2104:26956:19426_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD4-11*01 ORF 1 8 7 14 8.7.14 [3.17.38.11] CARVLSPPYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtactgtctccaccttactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3232 3231 M02948:184:000000000-JK6TB:1:2104:17513:19531_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1155 100.00 231/231 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-6*01 F 1 8 7 13 8.7.13 [7.17.38.11] CARTKSSSPNWFDPW in-frame + tccctcacctgcactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggactaaaagcagctcgccgaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 334 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3233 3232 M02948:184:000000000-JK6TB:1:2104:24613:20195_1:N productive Homsap IGHV4-61*01 F, or Homsap IGHV4-61*03 F (see comment) 815 84.51 191/226 nt Homsap IGHJ3*01 F (see comment) 178 84.00 42/50 nt Homsap IGHD3-9*01 F 2 10 7 14 10.7.14 [3.17.38.11] CARRGHDILTGSMDVW in-frame + low V-REGION identity (84.51%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgcgggcacgatattttgactggttctatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3234 3233 M02948:184:000000000-JK6TB:1:2104:10536:20619_1:N productive Homsap IGHV4-34*03 F 1014 95.89 210/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-9*01 F 2 8 7 16 8.7.16 [3.17.38.11] CAREGGYYDTPGGAFDIW in-frame + cgctgtctatggtgggtccttcagtgattactactggacctggatccgccagcccccagggaagggactggagtggattggggaaatcaatcatagtggagacaccaagtgcaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaggagggtattacgatacaccggggggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3235 3234 M02948:184:000000000-JK6TB:1:2104:24907:20724_1:N productive Homsap IGHV1-2*04 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-13*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARGAAAQSVDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactattcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggcagcagcccagtccgttgactactggggccagggaaccctggtcaccgtctcctcaggaagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3236 3235 M02948:184:000000000-JK6TB:1:2104:10528:20790_1:N productive Homsap IGHV3-49*04 F 1082 96.94 222/229 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 10 12 8.10.12 [3.17.38.11] CASWDGSGWCLDYW in-frame + tgcagcctctggattcacctttggtgattatgctatgacctgggtccgccaggctccagggaaggggctggagtgggttggtttcattagaagcaaagcttatggtgggacaacagagtacgccgcgtctgtgaaaggcagattcaccatctcaagagatgattccaaaagcatcgcctatctgcaaatgaacagcctgaaaaccgaggacacggctgtgtattactgtgcgagttgggatggcagtggctggtgtcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3237 3236 M02948:184:000000000-JK6TB:1:2104:26101:21176_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-2*01 F 3 8 7 17 8.7.17 [3.17.38.11] CARGRIVVVPAGSYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggcagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggccgtattgtagtagtaccagctggtagctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3238 3237 M02948:184:000000000-JK6TB:1:2104:23384:21319_1:N productive Homsap IGHV3-7*01 F 1052 96.86 216/223 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD3-3*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARDSPPFWSGPGYFDLW in-frame + tgcagcctctggattcaccttcagaagctattggatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaactgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaaggactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgtgcgagagatagtcctcctttttggagtggccccgggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3239 3238 M02948:184:000000000-JK6TB:1:2104:9621:22249_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARDYTDYGDYVDLDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagactatactgactacggtgactacgtggaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3240 3239 M02948:184:000000000-JK6TB:1:2104:9844:22554_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARDGGGFDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatggcggtggcttcgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3241 3240 M02948:184:000000000-JK6TB:1:2104:6691:22848_1:N: unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69D*01 F 1076 93.44 228/244 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 3 8 8 20 8.8.20 [10.17.38.11] CARGLRVPRIGRGQYYYYMDVW in-frame + rearranged sequence, stop codons ggcctcggtgatgttctccttctaggcatctgaaggcatcttgagcatctatgctatcatcatggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgaacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatgtagctgagaagcctgagatctgaggacacggccgtgtattactgtgcgagagggttgcgggtcccgaggataggacggggccagtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3242 3241 M02948:184:000000000-JK6TB:1:2104:9136:23249_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 974 93.64 206/220 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-16*01 F 3 8 7 12 8.7.12 [3.17.38.11] CARDQGGLDAFDIW in-frame + tgcagcctctggggtcaccgtcagtaggaagtacatgacctgggtccgccaggctccagggatggggctggagtccgtctcagtaattcacagcggtggtgacacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagaggcgaggacacggctgtgtattactgtgcgagagatcaaggaggtttggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3243 3242 M02948:184:000000000-JK6TB:1:2104:16115:23795_1:N productive Homsap IGHV3-7*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-10*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARELSANAMVRGVMGYW in-frame + tgcagcctctggattcacctttagtagctattggatgacctgggtccgccaggctccagggaaggggctggagtgggtgtccaacataaagcaagatggaagcgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagaaccgaggacacggccgtgtattactgtgcgagagaattgtccgccaacgcaatggttcggggagtaatgggctactggggcaagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3244 3243 M02948:184:000000000-JK6TB:1:2104:18511:24050_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 214 84.75 50/59 nt Homsap IGHD2-15*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARVDGSYYMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagttgatgggagctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3245 3244 M02948:184:000000000-JK6TB:1:2105:16472:2145_1:N: unproductive (see comment) Homsap IGHV1-18*01 F 1058 92.62 226/244 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-12*01 F 2 8 8 13 8.8.13 [10.17.38.11] CATSGQWPRYQFDYW in-frame + rearranged sequence, stop codons tgcctcagtgatgttctcctgcaaggcttctggttacacctttacctgttatgttatcacctgggtgcgacaggctccttgacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacatactatgcacagaaacttcagggcagagtcaccatgaccacagacacattcatcagcacagcctacatggagctgagcagactgagatctgaggacacggccgtgtattactgtgcgacgtcggggcagtggccgcgatatcaatttgactactggggacagggaaccctggtcaccgtctcatcagggagtgcatccgccccaacacttttccccc 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3246 3245 M02948:184:000000000-JK6TB:1:2105:13507:2170_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ3*01 F, or Homsap IGHJ4*03 F 145 78.72 37/47 nt Homsap IGHD6-25*01 F 3 8 8 7 8.8.7 [3.17.38.11] CLKDYQGDW in-frame + tgccgcctctggactcacctttagtaactatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgagcagcctgagagccgaagacacggccgtctattactgtttgaaggattaccagggggactggggccaagggacagtggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3247 3246 M02948:184:000000000-JK6TB:1:2105:7172:2763_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ3*02 F 169 82.00 41/50 nt Homsap IGHD3-10*01 F 1 8 8 9 8.8.9 [2.17.38.11] CARDEDLLPNW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagacgaggatttactacctaactggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3248 3247 M02948:184:000000000-JK6TB:1:2105:7956:4124_1:N:0 unproductive (see comment) Homsap IGHV3-11*03 F, or Homsap IGHV3-11*05 F (see comment) 360 78.63 92/117 nt Homsap IGHJ4*02 F (see comment) 195 89.58 43/48 nt Homsap IGHD2-21*01 F 1 X 1 X X.1.X [X.X.38.11] CARLR*GCCGGDVYCC#FDSW out-of-frame + rearranged sequence, stop codons low V-REGION identity (78.63%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgtagcctctgcctctggattcagggccgattcaccatctccagagacaacgccatgaactcactgtatgtgcacatgaacagcctgagcgacgaggacacggccatttgctactgtgcgagactccgttgaggatgttgtggtggtgatgtctactgctgtgctttgactcctggggccagggaaccctggccaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 268 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3249 3248 M02948:184:000000000-JK6TB:1:2105:15980:4635_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 3 8 8 12 8.8.12 [2.17.38.11] CATGVVLTTGFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgactggagtggttcttaccacaggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3250 3249 M02948:184:000000000-JK6TB:1:2105:25648:4894_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKDLSGSELGRFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcttagtgggagcgaacttggccggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3251 3250 M02948:184:000000000-JK6TB:1:2105:11130:5006_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1068 98.63 216/219 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD4-11*01 ORF 2 8 8 18 8.8.18 [2.17.38.11] CARRSYDYSNYNYYYYMDVW in-frame + gcatctggatacaccttcaccctctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtttacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacggagttatgactacagtaactacaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3252 3251 M02948:184:000000000-JK6TB:1:2105:27494:6029_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F (see comment) 184 77.42 48/62 nt Homsap IGHD1-20*01 F 3 8 7 12 8.7.12 [3.17.38.11] CARAPHTWAYMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcgccgcatacgtgggcctacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3253 3252 M02948:184:000000000-JK6TB:1:2105:18641:6143_1:N: unproductive (see comment) Homsap IGHV1-2*04 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 3 8 8 X 8.8.X [2.17.38.11] CARAPHDSSGYYDP#DYW out-of-frame + rearranged sequence, stop codons gcttctggttacacctttaccagctacggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcaccccacgatagtagtggttattacgacccatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3254 3253 M02948:184:000000000-JK6TB:1:2105:3359:6826_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 2 8 8 31 8.8.31 [2.17.38.11] CATIGPGSTSFEPEAAAGQRGASYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaatcgggccgggtagtaccagctttgagcccgaagcagcagctgggcaaaggggagcgtcttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 407 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3255 3254 M02948:184:000000000-JK6TB:1:2105:21217:7182_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1055 97.73 215/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-9*01 F 1 8 7 19 8.7.19 [3.17.38.11] CARVRSSRYFDWLMRSGFDYW in-frame + cgctgtctatggttggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggcgtggattggggaaatccatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaaactgagctctgtgaccgccgcggacacggctatgtattactgtgcgagagtcagaagctcgcgatattttgactggttaatgaggtcgggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccgacgtcggatctgagcgggctggcaaggcgcatag 0 0 397 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3256 3255 M02948:184:000000000-JK6TB:1:2105:10657:8320_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-15*01 F 2 8 8 23 8.8.23 [2.17.38.11] CARGRYCSGGSCYSGHYYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccgttattgtagtggtggtagctgctactccggccactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3257 3256 M02948:184:000000000-JK6TB:1:2105:3873:8545_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD6-19*01 F 1 8 7 16 8.7.16 [3.17.38.11] CARGGGPDFDSSGWYRGW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcggggggccagactttgatagcagtggctggtataggggctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3258 3257 M02948:184:000000000-JK6TB:1:2105:13612:8692_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F or Homsap IGHV3-33*08 F 957 92.34 205/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD7-27*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARDPGAYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcctggggcctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3259 3258 M02948:184:000000000-JK6TB:1:2105:21551:10404_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 2 8 7 25 8.7.25 [3.17.38.11] CARDRRRIGDYYGSGSYSFYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcgaacacggccgtgtattactgtgcgagagatagaaggcgaatcggggattactatggttcggggagttatagtttctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 390 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3260 3259 M02948:184:000000000-JK6TB:1:2105:11641:10418_1:N productive Homsap IGHV1-8*01 F 1077 99.09 217/219 nt Homsap IGHJ5*02 F (see comment) 138 74.51 38/51 nt Homsap IGHD4-17*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARGRMTTVTYGTW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggcctctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagtagcctgagatctgaggacacggccgtgtattactgtgcgagaggccgaatgactacggtgacatacgggacttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3261 3260 M02948:184:000000000-JK6TB:1:2105:16881:10999_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*11 F or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69D*01 F 960 93.15 204/219 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARVQGSSHTRYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtccaggggagctcccacacacgatactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3262 3261 M02948:184:000000000-JK6TB:1:2105:19932:11693_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*02 F 3 8 8 17 8.8.17 [2.17.38.11] CARTVVPAAIVYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaacagtagtaccagctgctatagtctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3263 3262 M02948:184:000000000-JK6TB:1:2105:7146:11828_1:N: productive Homsap IGHV3-48*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDQASGSYPAPHDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgagtattactgtgcgagagatcaggcgagtgggagctaccctgcccctcatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3264 3263 M02948:184:000000000-JK6TB:1:2105:4117:12194_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARRGYYYDSSGHYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgggggtattactatgatagtagtggccactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3265 3264 M02948:184:000000000-JK6TB:1:2105:19598:12237_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 3 8 8 9 8.8.9 [3.17.38.11] CARDRGQSDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcaagagatcggggccagagtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3266 3265 M02948:184:000000000-JK6TB:1:2105:15124:13008_1:N productive Homsap IGHV3-48*03 F 1186 97.58 242/248 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 2 8 8 27 8.8.27 [11.17.38.11] CARDAKDYDFWSGYDNHPKSGYYYGMDVW in-frame + ctgggggggtcctgagactcacctgtgcagctactggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgccaaggattacgatttttggagtggttacgacaaccacccgaaatcggggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 393 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3267 3266 M02948:184:000000000-JK6TB:1:2105:25568:13375_1:N productive Homsap IGHV1-2*02 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-23*01 ORF 2 8 8 12 8.8.12 [2.17.38.11] CATRDYGGNNFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgactcgcgactacggtggtaataactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3268 3267 M02948:184:000000000-JK6TB:1:2105:22546:14133_1:N unproductive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt 8 7 10 8.7.10 [3.17.38.11] CARGLELWSRY* (see V-DOMAIN Functionality comment) in-frame + rearranged sequence, stop codons; IMGT/JunctionAnalysis gives no results for this JUNCTION; TRP 118 not identified cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggattggagctatggtcaagatactgaggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3269 3268 M02948:184:000000000-JK6TB:1:2105:27459:14883_1:N unproductive (see comment) Homsap IGHV4-34*03 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-25*01 F 2 8 7 13 8.7.13 [3.17.38.11] CTTLAVATYKRFDY* in-frame + rearranged sequence, stop codons; TRP 118 not identified cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcatgagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtaccacactagcagtggcaacctacaagagatttgactactagggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3270 3269 M02948:184:000000000-JK6TB:1:2105:23209:15590_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 207 95.56 43/45 nt 8 8 6 8.8.6 [3.17.38.11] CARPFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccgtatctctcgctgagcgggctggcaaggcgcatag 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3271 3270 M02948:184:000000000-JK6TB:1:2105:17987:15839_1:N productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARVSGYSSGWYLDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagtttctgggtatagcagtggctggtaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3272 3271 M02948:184:000000000-JK6TB:1:2105:25465:15984_1:N productive Homsap IGHV1-24*01 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-6*01 F 2 8 8 18 8.8.18 [2.17.38.11] CATGIAARPPNYYYYGMDVW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggcgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaggcatagcagctcgtcccccaaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3273 3272 M02948:184:000000000-JK6TB:1:2105:11468:16612_1:N productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ5*02 F (see comment) 147 76.47 39/51 nt Homsap IGHD1-7*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARTNVEKELELGLRDW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaacgaacgtagagaaagaactggaactagggctaagggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3274 3273 M02948:184:000000000-JK6TB:1:2105:11357:17136_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-17*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARALRRYGDYGPVDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagccctacggcgctacggtgactacggcccagttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3275 3274 M02948:184:000000000-JK6TB:1:2105:11947:17206_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-10*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARHSGSDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatttattactgtgcgagacattccgggagtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3276 3275 M02948:184:000000000-JK6TB:1:2105:12063:19363_1:N productive (see comment) Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 670 100.00 134/134 nt 99.25 133/134 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD6-13*01 F 2 8 X 17 8.X.17 [3.2.31.11] CASLPIAAAPIEVYYMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 88 nucleotides (from position 42 in the user submitted sequence), (cause frameshift) aagggttctggatacagctttaccagctactggatcagctgggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtctaccgatagcagcagctcccatagaggtctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 280 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3277 3276 M02948:184:000000000-JK6TB:1:2105:23313:19801_1:N unproductive (see comment) Homsap IGHV1-8*01 F, or Homsap IGHV1-8*02 F or Homsap IGHV1-8*03 F 366 98.67 74/75 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 2 X X X X.X.X [X.X.25.11] CAR*TLSRLTRIL**YQLLSILLSGYDYGL#YYYYGMDVW out-of-frame + rearranged sequence, stop codons cggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagataaactctctcccggcttactaggatattgtagtagtaccagctgctaagtattcttctgagtggctacgattacgggctgctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 251 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3278 3277 M02948:184:000000000-JK6TB:1:2105:20676:22470_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-3*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARPNGIGSSTDAFDIW in-frame + aagggttctggatgcagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccaaatgggattggttcttcgaccgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3279 3278 M02948:184:000000000-JK6TB:1:2105:16611:24349_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-12*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARVAMITSMELEYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtggctatgattacgtcgatggaattagagtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3280 3279 M02948:184:000000000-JK6TB:1:2105:9826:25170_1:N: productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 232 96.00 48/50 nt Homsap IGHD5-24*01 ORF 3 8 8 8 8.8.8 [3.17.38.11] CARDHWFDPW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcaagagatcactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3281 3280 M02948:184:000000000-JK6TB:1:2102:8872:3798_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD2-2*01 F 3 8 8 17 8.8.17 [3.17.38.11] CARVWGDIVVVGYYYMDVW in-frame + aagggttctggatacagctttaccagctactggctcggctgggttcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagtttggggggatattgtagtagtaggctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3282 3281 M02948:184:000000000-JK6TB:1:2102:25300:4144_1:N: productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*01 F 2 8 7 9 8.7.9 [3.17.38.11] CARGKGGVDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaggcaagggtggcgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3283 3282 M02948:184:000000000-JK6TB:1:2102:10643:6350_1:N: productive Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ6*03 F 233 86.89 53/61 nt Homsap IGHD3-10*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARDGLGYYYMDVW in-frame + tgcagcctctggatttaccttcagtagttttgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtggcggtagtaccatatactacgcagactctgtgaagggccgattcaccatttccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatggattggggtactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3284 3283 M02948:184:000000000-JK6TB:1:2102:4851:6649_1:N:0 productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-8*01 F 1 8 8 9 8.8.9 [3.17.38.11] CARDQGWFDPW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcaagggtggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3285 3284 M02948:184:000000000-JK6TB:1:2102:15021:6843_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD6-13*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARSASSWYYYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggtctgctagcagctggtactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3286 3285 M02948:184:000000000-JK6TB:1:2102:10384:7399_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1005 95.43 209/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARERTNEGGGENYYGMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagaggacgaatgagggtggtggtgagaactactacggtatggacgtctggggccaagggaccactgtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3287 3286 M02948:184:000000000-JK6TB:1:2102:7372:7466_1:N:0 No rearrangement found Homsap IGHV4-61*01 F 1144 96.33 236/245 nt 10 7 X 10.7.X [9.17.38.X] + no rearrangement found ctggggggtccctcacctgcactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcaacccttttccccc 0 0 261 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3288 3287 M02948:184:000000000-JK6TB:1:2102:23592:7623_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD4-11*01 ORF 2 8 8 15 8.8.15 [3.17.38.11] CARRGFDYSNFYAFDIW in-frame + aagggttctggatacagctttaccagttactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggggttttgattacagtaacttctatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3289 3288 M02948:184:000000000-JK6TB:1:2102:4882:8977_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F (see comment) 188 84.62 44/52 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARVGNYYDSSGYYYGLW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtgggcaattactatgatagtagtggttattactacgggctctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3290 3289 M02948:184:000000000-JK6TB:1:2102:25274:9162_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 185 81.82 45/55 nt Homsap IGHD3-9*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARHDGTGSDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgatgggaccggttcggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3291 3290 M02948:184:000000000-JK6TB:1:2102:10634:9239_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-3*01 F 2 8 8 18 8.8.18 [2.17.38.11] CAGLHYDSTLTYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggggcttcattacgattctaccctcacctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3292 3291 M02948:184:000000000-JK6TB:1:2102:22023:9284_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARVEVGYYYDSSGYYDYW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagtggaggtggggtattactatgatagtagtggttattacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagagtcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3293 3292 M02948:184:000000000-JK6TB:1:2102:16865:9288_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARGGYAVAATLDYW in-frame + gcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaactgaacagcctgagagccgaggacacggctgtgtactactgtgcgagaggcggatatgcagtggcggccacacttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3294 3293 M02948:184:000000000-JK6TB:1:2102:8786:9754_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1001 95.00 209/220 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD2-15*01 F 2 8 7 15 8.7.15 [3.17.38.11] CAREDCGGGSCYYLDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattggggaaatcaatcatagtggaaacaccaactacaacccgtccctcgagagtcgagtcaacatatcagtagacacgtccaagaaccagttctccctgaaggtgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagaggattgtggtggtggtagctgctactacctggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3295 3294 M02948:184:000000000-JK6TB:1:2102:24041:10227_1:N productive Homsap IGHV3-48*03 F 1052 96.86 216/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-19*01 F 2 8 8 20 8.8.20 [3.17.38.11] CAKDWNLVTVAVAGGSRWFDPW in-frame + tgcagcctctggattcaccttcagtagttatggaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagattggaatttggtaacggtagcagtggctgggggctctcgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3296 3295 M02948:184:000000000-JK6TB:1:2102:12629:10879_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ6*03 F (see comment) 179 77.05 47/61 nt Homsap IGHD5-18*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARHQVDTADMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatcaggtggatacagctgacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3297 3296 M02948:184:000000000-JK6TB:1:2102:16172:11143_1:N productive Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt Homsap IGHD3-22*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARDRAYYYDSSGYYYGGYFDLW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatcgggcgtattactatgatagtagtggttattactacggggggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3298 3297 M02948:184:000000000-JK6TB:1:2102:22316:12233_1:N unproductive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD5-24*01 ORF 2 8 8 X 8.8.X [3.17.38.11] CARGTAK#YWYFDLW out-of-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagggacggccaaaatactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 355 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3299 3298 M02948:184:000000000-JK6TB:1:2102:6271:12499_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-16*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAKERREGEDDAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagagaggagggagggggaggatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3300 3299 M02948:184:000000000-JK6TB:1:2102:11625:12506_1:N productive Homsap IGHV3-11*04 F 1016 95.07 212/223 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARGDCSSTSCYVSYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgacctgggtccgccaggctccagggaaggggctggagtgggtttcgtacattagtggtagtggtagtaccatatactccgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaacacactgtatctgcaattgaacagtgtgagagctgaggacacggctgtgtattactgtgcgagaggagattgtagtagtaccagctgctatgttagctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3301 3300 M02948:184:000000000-JK6TB:1:2102:13923:14571_1:N productive Homsap IGHV2-5*02 F, or Homsap IGHV2-5*04 F 1164 96.39 240/249 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-15*01 F 3 10 7 17 10.7.17 [11.17.38.11] CAHRVVAVAGKEGNRFDPW in-frame + acacagaccctcacactgacctgcaccttctctgggttctcactcaacactgatggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctctccatcaccaaggacagctccaaaaagcaggtggtcctaacaatgaccaacatggaccctgtggacacaggcacatattactgtgcacacagagttgtggcggtagctggaaaggagggcaacaggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 395 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3302 3301 M02948:184:000000000-JK6TB:1:2102:25506:15126_1:N productive Homsap IGHV3-33*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 3 8 8 13 8.8.13 [3.17.38.11] CAKSRVVVPAACDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatcacgtgtagtagtaccagctgcctgtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3303 3302 M02948:184:000000000-JK6TB:1:2102:22927:15248_1:N productive (see comment) Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 1065 100.00 213/213 nt 99.06 211/213 nt Homsap IGHJ4*01 F, or Homsap IGHJ4*03 F (see comment) 186 87.50 42/48 nt Homsap IGHD3-22*01 F 3 6 8 17 6.8.17 [2.17.37.11] CARDTPLTMIVPTNSMDYW in-frame + potentially, because of detected insertion/deletion other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) in CDR1-IMGT, from codon 37 of V-REGION: 5 nucleotides (from position 26 in the user submitted sequence), (cause frameshift)in FR3-IMGT, from codon 83 of V-REGION: 1 nucleotides (from position 150 in the user submitted sequence), (cause frameshift) gcttctggttacacctttaccagctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatcacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagataccccccttactatgatagtaccgacaaactccatggactactggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3304 3303 M02948:184:000000000-JK6TB:1:2102:10070:15978_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-17*01 F 3 8 7 9 8.7.9 [3.17.38.11] CARGMTTVDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaagtacaacccctccctcaagagtcgagtcaccatttcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggatgactacggtagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatttccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3305 3304 M02948:184:000000000-JK6TB:1:2102:15922:15992_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD4-23*01 ORF 2 8 8 10 8.8.10 [2.17.38.11] CAREDDYGGNSW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggatgactacggtggtaattcgtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3306 3305 M02948:184:000000000-JK6TB:1:2102:9719:16577_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F (see comment) 202 80.65 50/62 nt Homsap IGHD5-24*01 ORF 1 8 8 22 8.8.22 [3.17.38.11] CAKDIFGQGVEMATIAPSYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatattttcgggcaaggagtagagatggctacaattgccccttcttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3307 3306 M02948:184:000000000-JK6TB:1:2102:19516:17094_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARDSTIFGVVDYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatagcacgatttttggagtggttgactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3308 3307 M02948:184:000000000-JK6TB:1:2102:21125:19914_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 8 8 17 8.8.17 [3.17.38.11] CAKVGTTITTYYYHYMDVW in-frame + tgcagcctctggatttagctttagtaactattggatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccgcttaaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggggactacaataactacgtactactatcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3309 3308 M02948:184:000000000-JK6TB:1:2102:18619:20582_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*01 F 133 74.00 37/50 nt Homsap IGHD5-24*01 ORF 2 8 7 11 8.7.11 [3.17.38.11] CARGMMRWLQSAW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagggatgatgagatggctacaatctgcctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3310 3309 M02948:184:000000000-JK6TB:1:2102:27325:20661_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1023 96.35 211/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-15*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARGLGIVDEGGAFDIW in-frame + acatctggatactccttcaccaggtactatatgcactgggtgcgacaggcccctggacaagggcttgagtgcatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtcttgggatagtagatgaggggggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3311 3310 M02948:184:000000000-JK6TB:1:2102:24708:22319_1:N productive Homsap IGHV3-33*03 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-20*01 F 3 8 8 11 8.8.11 [3.17.38.11] CASQPDNWNAGYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaagacacggccatctattactgtgcgagtcaacctgataactggaacgccgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3312 3311 M02948:184:000000000-JK6TB:1:2102:22359:22612_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-21*02 F 3 8 7 22 8.7.22 [3.17.38.11] CARVTSVVVTAIGPRNYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtaacgtctgtggtggtgactgctattggaccccggaactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaatccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3313 3312 M02948:184:000000000-JK6TB:1:2102:6188:23091_1:N: productive Homsap IGHV1-2*02 F 978 94.06 206/219 nt Homsap IGHJ3*01 F, or Homsap IGHJ3*02 F 142 76.00 38/50 nt Homsap IGHD1-26*01 F 1 8 8 7 8.8.7 [2.17.38.11] CAAGGGGSW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggcagggggaggcgggtcctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3314 3313 M02948:184:000000000-JK6TB:1:2102:17488:24092_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARYYYGSGSYYKLYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaagatattactatggttcggggagttattataagctatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3315 3314 M02948:184:000000000-JK6TB:1:2102:13369:24499_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD6-19*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARKPGGIAVAGISW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaagccggggggtatagcagtggctggtatttcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3316 3315 M02948:184:000000000-JK6TB:1:2103:7148:3139_1:N:0 productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 2 10 7 13 10.7.13 [3.17.38.11] CARSDCSGGSCFDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggtcggattgtagtggtggtagctgctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3317 3316 M02948:184:000000000-JK6TB:1:2103:21971:3367_1:N: productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-17*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARATVTTSIDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggcgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagctacggtgactacgtctattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3318 3317 M02948:184:000000000-JK6TB:1:2103:14535:3457_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ1*01 F (see comment) 161 78.85 41/52 nt Homsap IGHD4-17*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARGPDAGYGDYVGGVRYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaggccccgacgcgggctacggtgactacgttggtggtgtccgctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3319 3318 M02948:184:000000000-JK6TB:1:2103:17643:4311_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARGGKAVAGKIDYW in-frame + gcttctggttacacctttaccagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagggggcaaggcagtggctggaaagattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3320 3319 M02948:184:000000000-JK6TB:1:2103:11739:4314_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD1-14*01 ORF 1 8 8 11 8.8.11 [2.17.38.11] CARDIAGGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagacatagccggtggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3321 3320 M02948:184:000000000-JK6TB:1:2103:8379:5596_1:N:0 productive Homsap IGHV3-48*03 F 953 91.93 205/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARFIQGVAATDYW in-frame + tgtagcctctggattcaccttcagcaattatgaaatgaattgggtccgccaggctccagggaaggggctggagtgggtttcattcattactagtactgatagtggcagacattatgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaattcagtgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgtgcgagatttattcagggggtagctgccactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3322 3321 M02948:184:000000000-JK6TB:1:2103:13566:6812_1:N: productive Homsap IGHV3-11*06 F 1034 95.96 214/223 nt Homsap IGHJ4*03 F 132 75.00 36/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGSVGDSGSWTEW in-frame + tgcagcctctggattcaccttcaatgactactacatgagctggatccgccaggctccagggaaggggcttgagtgggtttcatacattagtggtagtgctagttacacaaactacgcagactctgtgaagggccgattcaccgtctccagagacaacgccaagaactcactttttctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggggatccgtcggggacagtgggagctggacagaatggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3323 3322 M02948:184:000000000-JK6TB:1:2103:13336:6814_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1143 98.72 231/234 nt Homsap IGHJ5*02 F (see comment) 141 84.62 33/39 nt Homsap IGHD3-10*01 F 2 8 7 12 8.7.12 [8.17.38.7] CARTKAGYYDLDPW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) ctgtccctcacctgcactgtctcgggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtatactactgtgcgagaacaaaggcgggttattacgatttggacccctggggccagggaaccctggtca 0 0 292 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3324 3323 M02948:184:000000000-JK6TB:1:2103:19046:7304_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARGGGGYCSSTSCYIDYW in-frame + aagggttctggatacagctctaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaggcggtggggggtattgtagtagtaccagctgctatattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3325 3324 M02948:184:000000000-JK6TB:1:2103:24874:7899_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 971 92.83 207/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*02 F 3 8 8 16 8.8.16 [3.17.38.11] CARDRARSGIYYYGMDVW in-frame + tgcagcctccggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggtgtgggtctcacgtattaatcctgatgggagtggcacatcctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaccgagcccgtagtggcatctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3326 3325 M02948:184:000000000-JK6TB:1:2103:3098:8161_1:N:0 productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARARGDSVVPAAPDAFDIW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagggcccggggggactcagtagtaccagctgctcctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3327 3326 M02948:184:000000000-JK6TB:1:2103:18918:8650_1:N: productive Homsap IGHV3-48*01 F 1079 98.21 219/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*02 F 2 8 8 23 8.8.23 [3.17.38.11] CARVRGYCSSTSCYTAYYHFYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagtgagggggtattgtagtagtaccagctgctatactgcgtactaccacttctacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3328 3327 M02948:184:000000000-JK6TB:1:2103:4942:9142_1:N:0 productive Homsap IGHV3-30*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CASSPDSGSYLDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctacaaataaacagcctgagagctgaggacacggctgtgtattactgtgcgagcagccccgatagtgggagctaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3329 3328 M02948:184:000000000-JK6TB:1:2103:22763:9237_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ6*04 F (see comment) 180 76.19 48/63 nt Homsap IGHD3-9*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARAFLLMTALGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagcatttttactgatgaccgctctcggtatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3330 3329 M02948:184:000000000-JK6TB:1:2103:14087:9427_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1186 97.58 242/248 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [11.17.38.11] CAQKGGSGSYWGGFDYW in-frame + gtgggggttccctgggactctcctgtgcagcctctggattcacctttagcagctatgacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaaggggcggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgcgagccgaggacacggccgtatattactgtgcacaaaaagggggttcggggagttattggggtggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3331 3330 M02948:184:000000000-JK6TB:1:2103:3381:9591_1:N:0 No rearrangement found Homsap IGHV3-7*01 F 953 91.93 205/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactctctgtatctgcaaatgaacagcctgagagccaggggttgcgctgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccggtgagaattcccctcgcgatat 0 0 309 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3332 3331 M02948:184:000000000-JK6TB:1:2103:9232:12088_1:N: productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 2 8 8 10 8.8.10 [2.17.38.11] CATTYGDVFDYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaactacctacggtgacgtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3333 3332 M02948:184:000000000-JK6TB:1:2103:27930:12151_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARFSGRASEYYFYYGMDVW in-frame + tgcagcctctggattcacctttagtagctatgccgtgagctgggtccgccaggctccagggaaggggctggagtgggtctcaagtattagtgatagtggtagtggcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggactcggctgtgtattactgtgcgaggttttctggcagggcaagtgagtactacttctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3334 3333 M02948:184:000000000-JK6TB:1:2103:12652:12857_1:N productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-2*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARAIHCSSTSCYSPWFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgagggcaattcattgtagtagtaccagctgctattcgccctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3335 3334 M02948:184:000000000-JK6TB:1:2103:19209:13895_1:N productive Homsap IGHV1-8*01 F 1068 98.63 216/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARGERSGRYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgagcggtcagggagatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3336 3335 M02948:184:000000000-JK6TB:1:2103:10806:14401_1:N unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F 188 84.62 44/52 nt Homsap IGHD2-21*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARGFHPDYYE*HW in-frame + rearranged sequence, stop codons gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtttccacccggattactatgaatagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3337 3336 M02948:184:000000000-JK6TB:1:2103:11716:16349_1:N productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ2*01 F 232 96.00 48/50 nt 8 8 8 8.8.8 [3.17.38.11] CARDWHFDLW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagggactggcacttcgatctctggggccgtggcaccctggtcactatctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3338 3337 M02948:184:000000000-JK6TB:1:2103:18317:16664_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [2.17.38.11] CASVNGSSPNREIDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcgtaaatggtagcagccccaatcgggagattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3339 3338 M02948:184:000000000-JK6TB:1:2103:17722:18699_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*02 F or Homsap IGHV1-69*04 F or Homsap IGHV1-69*09 F or Homsap IGHV1-69*10 F or Homsap IGHV1-69*11 F or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*17 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69*20 (F) or Homsap IGHV1-69D*01 F 523 86.86 119/137 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-7*01 F 3 X 7 21 X.7.21 [X.X.38.11] CARDGQGVRYNWNYVSDNWFDPW in-frame + atatcgcgaggggcattctcacaggctatgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatggtcagggtgtccggtataactggaactacgtctcagacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 264 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3340 3339 M02948:184:000000000-JK6TB:1:2103:16316:19647_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD6-25*01 F 3 10 7 16 10.7.16 [3.17.38.11] CAREQSERIRYYYYMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaacaatcggagcgcattcgttactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgggaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3341 3340 M02948:184:000000000-JK6TB:1:2103:20479:20602_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD4-11*01 ORF 2 8 8 19 8.8.19 [2.17.38.11] CSCREDASSSHYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgttcgtgtcgggaagatgcctccagttctcattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3342 3341 M02948:184:000000000-JK6TB:1:2103:15500:20879_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 8 7 12 8.7.12 [3.17.38.11] CAAMGPYSGTMDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcggcgatgggtccctattcggggaccatggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3343 3342 M02948:184:000000000-JK6TB:1:2103:15857:21991_1:N unproductive (see comment) Homsap IGHV1-24*01 F 1121 95.49 233/244 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 21 8.8.21 [10.17.38.11] CATAGRWEGKYYYDSSGYYWGYW in-frame + rearranged sequence, stop codons gtgctcggtgaagctcccctgcaaggtttccggatacaccctcacttaattatccatgcactgggtgcgtcaggctcctggaaaatggcttgcttggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagcagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagctggtcgctgggaaggcaaatattactatgatagtagtggttattactggggctactggggtcagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3344 3343 M02948:184:000000000-JK6TB:1:2103:24371:22345_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-3*01 F 3 8 8 19 8.8.19 [2.17.38.11] CARGRVTIFGVADYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagttgatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggcgggttacgatttttggagtggccgattactactactacatggacgtctggggcgaagggaccacggtcaccgtctcctcaaggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3345 3344 M02948:184:000000000-JK6TB:1:2103:22873:23341_1:N productive Homsap IGHV4-38-2*01 F, or Homsap IGHV4-38-2*02 F 911 99.46 183/184 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 X 7 13 X.7.13 [X.16.38.11] CARDQGGGRGYMDYW in-frame + gggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagcactgtgaccgccgcagacacggccgtgtattactgtgcgagagatcagggagggggtagaggatatatggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 287 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3346 3345 M02948:184:000000000-JK6TB:1:2116:10378:4614_1:N: productive Homsap IGHV3-7*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 174 90.48 38/42 nt Homsap IGHD7-27*01 F 3 8 8 5 8.8.5 [3.17.38.11] CATGGYW in-frame + tgcagcctctggattcacctttagcaactatctgatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaagtgagaaaaactatgtggactctgcgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgacagggggctattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3347 3346 M02948:184:000000000-JK6TB:1:2116:20707:4777_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 245 100.00 49/49 nt 8 8 8 8.8.8 [2.17.38.11] CARDYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3348 3347 M02948:184:000000000-JK6TB:1:2116:3534:6494_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1159 96.37 239/248 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [11.17.38.11] CAKDVYYYDSSGSCSLDYW in-frame + ctggggggaccctgggaagctcctgtgcggcctctggatggaggtttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatgtatattactatgatagttccggtagctgtagccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3349 3348 M02948:184:000000000-JK6TB:1:2116:16074:6592_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 978 94.06 206/219 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARHGDFWSGSADYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatggggatttttggagtggttccgccgactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3350 3349 M02948:184:000000000-JK6TB:1:2116:10585:6803_1:N: productive Homsap IGHV1-2*02 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARFYSSGRAVDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagattttacagtagtggtcgagcggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3351 3350 M02948:184:000000000-JK6TB:1:2116:24497:7714_1:N: productive Homsap IGHV3-21*04 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F 251 90.16 55/61 nt Homsap IGHD2-21*01 F 1 8 8 12 8.8.12 [3.17.38.11] CAREMWYYYGMDVW in-frame + tgcagcctctggattcacctttagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcgccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagaaatgtggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaaccctttgccccctcgtctcctgtgagaatttccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3352 3351 M02948:184:000000000-JK6TB:1:2116:25846:8211_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1092 99.10 220/222 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt Homsap IGHD1-26*01 F 2 8 8 17 8.8.17 [3.17.38.11] CGRTLNPWEVRASGYFDLW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattattgtgggagaactcttaatccctgggaagtacgggcatcagggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagtatttccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3353 3352 M02948:184:000000000-JK6TB:1:2116:20286:8559_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-22*01 F 2 8 7 20 8.7.20 [3.17.38.11] CARDREYYYDSSGYYSYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatagggaatattactatgatagtagtggttattacagttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3354 3353 M02948:184:000000000-JK6TB:1:2116:6146:9043_1:N:0 unproductive (see comment) Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARDSGSYFFFDY* in-frame + rearranged sequence, stop codons; TRP 118 not identified tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatagtgggagctactttttttttgactactagggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3355 3354 M02948:184:000000000-JK6TB:1:2116:22295:9775_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 1 8 8 9 8.8.9 [3.17.38.11] CANWIGPFDHW in-frame + tgcagcgtctggattcaccttcaggagctatggcatgcactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgggagccgaggacacggccgtatattactgtgcgaattggatcggcccgtttgaccactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3356 3355 M02948:184:000000000-JK6TB:1:2116:20421:9950_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-13*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAERTAAGKSYYYYGMDVW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcggaaagaacagcagctggtaaaagctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3357 3356 M02948:184:000000000-JK6TB:1:2116:29225:10072_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1123 94.76 235/248 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 8 8 17 8.8.17 [11.17.38.11] CAKVGTTITTYYYHYMDVW in-frame + cttgtgggtcatatggactctcctgtgcagcttctggattgacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccgcttaaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggggactacaataactacgtactactatcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3358 3357 M02948:184:000000000-JK6TB:1:2116:3888:10144_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD3-16*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARVRLGVYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtgcgtttgggggtctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3359 3358 M02948:184:000000000-JK6TB:1:2116:15435:10632_1:N productive Homsap IGHV3-7*03 F 1034 95.96 214/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARTGYCSSTSCYGYYYGMDVW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgacaggctccagggaaggggctagagggggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccttgtatcactgtgcgaggaccggatattgtagtagtaccagctgctatgggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3360 3359 M02948:184:000000000-JK6TB:1:2116:9904:11865_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-15*01 F 2 8 7 12 8.7.12 [3.17.38.11] CAREGFGFNWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagtaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagagggtttcggctttaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3361 3360 M02948:184:000000000-JK6TB:1:2116:20282:11924_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 2 8 8 23 8.8.23 [3.17.38.11] CARDVGYCSSTSCYNDYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagacgtaggatattgtagtagtaccagctgctacaatgactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatcagccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3362 3361 M02948:184:000000000-JK6TB:1:2116:3201:12310_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 3 8 8 11 8.8.11 [3.17.38.11] CASEVGGDAFDIW in-frame + aagggttctggatacagctttaccagctactgggtcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtgaagtggggggggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3363 3362 M02948:184:000000000-JK6TB:1:2116:15867:13141_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 3 8 8 14 8.8.14 [3.17.38.11] CANGAPTMIVVSYDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaatggggcccctactatgatagtagtaagctatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3364 3363 M02948:184:000000000-JK6TB:1:2116:20584:13795_1:N productive Homsap IGHV1-2*04 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD3-10*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARGCVTMVREYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggatgtgttactatggttcgggaatactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3365 3364 M02948:184:000000000-JK6TB:1:2116:28991:13882_1:N productive Homsap IGHV1-2*04 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-23*01 ORF 2 8 8 16 8.8.16 [2.17.38.11] CAREFGGYGGTRRGIDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagaattcggagggtacggtggtactaggaggggcattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3366 3365 M02948:184:000000000-JK6TB:1:2116:29674:14151_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 998 94.17 210/223 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD4-17*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKDPRDYAESVGMDVW in-frame + tgcagcgtctggattcactttcagtcactttggcatacattgggtccgccaggctccaggcaaggggctggagtgggtggcatttatttggtatgatggaactaataagtactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatccccgtgactatgctgagtctgtcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttcccccgcgtctcctgtgagaagtcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3367 3366 M02948:184:000000000-JK6TB:1:2116:11119:14718_1:N productive Homsap IGHV3-33*08 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*02 F 2 8 8 16 8.8.16 [3.17.38.11] CARDSCSSTSCYTFFGYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatagttgtagtagtaccagctgctatactttctttgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttatccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3368 3367 M02948:184:000000000-JK6TB:1:2116:23770:15090_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD1-1*01 F 3 8 8 19 8.8.19 [3.17.38.11] CARHKRYNWNDGAYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacataaaaggtacaactggaacgacggggcttactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3369 3368 M02948:184:000000000-JK6TB:1:2116:11525:15672_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*01 F 1 8 8 19 8.8.19 [3.17.38.11] CAKMFGSGQYQLLFPNAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtggtagtgctggtaacacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtctctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaatgttcggtagcgggcagtaccagctgctatttcctaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatttccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3370 3369 M02948:184:000000000-JK6TB:1:2116:18974:16451_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD4-11*01 ORF 2 8 8 12 8.8.12 [3.17.38.11] CARRVGSDYQIDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgcgtcggatctgactaccaaattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3371 3370 M02948:184:000000000-JK6TB:1:2116:21598:16583_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1175 100.00 235/235 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-2*01 F 2 8 7 15 8.7.15 [8.17.38.11] CARYCSSTSCYRGFDYW in-frame + cctgtccctcacctgcgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaggtattgtagtagtaccagctgctatcgcggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3372 3371 M02948:184:000000000-JK6TB:1:2116:5122:17439_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-24*01 ORF 1 8 8 11 8.8.11 [3.17.38.11] CARDGLEMASDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggtctagagatggctagtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3373 3372 M02948:184:000000000-JK6TB:1:2116:6018:18072_1:N: productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD2-21*01 F 2 8 8 14 8.8.14 [2.17.38.11] CAREYGDYDYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtgatggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagaatatggtgactacgactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3374 3373 M02948:184:000000000-JK6TB:1:2116:27863:19125_1:N productive Homsap IGHV4-59*12 (F) 1180 97.96 240/245 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 2 8 7 20 8.7.20 [11.17.38.11] CARGDFWSGYYTIRYYYYMDVW in-frame + ctgcggagacccattccctcaccggcactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaggggcgatttttggagtggttattatactatccgctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3375 3374 M02948:184:000000000-JK6TB:1:2116:15838:19631_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 944 91.48 204/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD1-1*01 F 1 8 8 11 8.8.11 [3.17.38.11] CAREGTPGTTDYW in-frame + cgtagcctctggattcacctttagcaactatgccatgagttgggtccgccaggctccagggaggggactggagtgggtctcaactattgatggtcctactgccaacacacactacgcagactccgtggagggccggttcaccatctccagagacaattccaagaacacgctctatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagagggcacacctggaacgacggactactggggcccgggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3376 3375 M02948:184:000000000-JK6TB:1:2116:7737:19780_1:N: unproductive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD6-6*01 F 2 8 8 X 8.8.X [3.17.38.11] CARLVIGSSSSA##YYYYYGMDVW out-of-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagattggtgatcggtagcagctcgtccgcccaattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 382 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3377 3376 M02948:184:000000000-JK6TB:1:2116:14896:20567_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARAKRYCSSTSCPGDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggccaagagatattgtagtagtaccagctgccctggggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3378 3377 M02948:184:000000000-JK6TB:1:2116:23113:20748_1:N productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-16*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARGGGGFMGLDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgaggggagggggggggtttatgggccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3379 3378 M02948:184:000000000-JK6TB:1:2116:9549:21435_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-3*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARAGITIFGVVIYYYYGMDVW in-frame + gcttctggaggcaccttcaccaggtatgctatcagttgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcggggattacgatttttggagtggtcatttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3380 3379 M02948:184:000000000-JK6TB:1:2116:18921:24556_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARDLLITMVRGVLNYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatctccttattactatggttcggggagttttgaactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3381 3380 M02948:184:000000000-JK6TB:1:2116:8895:24574_1:N: productive (see comment) Homsap IGHV3-43D*04 F 986 94.93 206/217 nt 94.47 205/217 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [3.17.36.11] CARLLYCSSTSCYGSYYYGMDVW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 90 of V-REGION: 6 nucleotides (from position 179 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtctctcttattagttgggatggtggtagcacatactatgcagactctgtgaagggtcgattcaccatctccagagacaacagcaaaaactccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgcgactcctgtattgtagtagtaccagctgctatgggtcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3382 3381 M02948:184:000000000-JK6TB:1:2117:16446:2473_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [3.17.38.11] CAKDGLTYYYDSSGYPWAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagacggcctcacgtattactatgatagtagtggttatccctgggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3383 3382 M02948:184:000000000-JK6TB:1:2117:12843:2655_1:N: productive Homsap IGHV1-18*04 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARGEGYYYGMDVW in-frame + gcttctggttacacctttaccagctacggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgagaggggaagggtactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3384 3383 M02948:184:000000000-JK6TB:1:2117:7525:2860_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 2 8 7 18 8.7.18 [3.17.38.11] CALCSTSCGNPYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgctttatgtagtaccagctgtgggaacccctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3385 3384 M02948:184:000000000-JK6TB:1:2117:19177:4029_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD6-13*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARDLEPSAAAGRYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatctagaaccctcagcagcagctgggcgctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3386 3385 M02948:184:000000000-JK6TB:1:2117:8291:5841_1:N:0 productive Homsap IGHV4-39*01 F, or Homsap IGHV4-39*05 F or Homsap IGHV4-39*08 (F) 1040 95.58 216/226 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD6-19*01 F 1 10 7 13 10.7.13 [3.17.38.11] CARHRGGYSRGLLYW in-frame + cactgtctctggtgactccatcagcagtactagttactactggggctggatccgccagcccccagggaaggggctggagtggattgggagtatctattatactgggaacacgtactacaacccgtccctcaagagtcgagtcaccatatctgtagacacgtctaagaaccagttctccctgaagcttacctctgtgaccgccgcagacacggctgtttattactgtgcgagacatcggggggggtatagccggggtctgctctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3387 3386 M02948:184:000000000-JK6TB:1:2117:13088:6333_1:N: productive Homsap IGHV4-4*09 (F), or Homsap IGHV4-59*03 F or Homsap IGHV4-59*12 (F) 983 94.09 207/220 nt Homsap IGHJ6*03 F (see comment) 274 93.55 58/62 nt Homsap IGHD3-3*01 F 2 8 7 22 8.7.22 [3.17.38.11] CARGLQLGWSAYSVYYYSYYMDVW in-frame + other possibilities: Homsap IGHJ6*04 and Homsap IGHJ6*01 (highest number of consecutive identical nucleotides) cgctgtctctggtggctccatcagtaattactactggagctggatccggcagccccaagggaagggcctggagtggattgggtacatctataacagtgggaacagcaactataacccctccctcaagagtcgagtcaccatatcagtggacacgtccaagaaccaattctccctgaagctgagctctgtgaccgccgcggacacggctgtttattactgtgcgagaggcctccaactgggttggagtgcttattctgtctactactactcctactacatggacgtctggggcgaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3388 3387 M02948:184:000000000-JK6TB:1:2117:7132:6583_1:N:0 productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-9*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARGVKLRYGYYFDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggctgtgtattactgtgcgagaggggtcaagttacgatatgggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3389 3388 M02948:184:000000000-JK6TB:1:2117:14103:8127_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 989 93.72 209/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcacctttagaagctattggatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccatcagtagtggtggtgattacataaactacgcagactcggtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgagcagcctgagagtcgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttcctcctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3390 3389 M02948:184:000000000-JK6TB:1:2117:6781:8987_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-18*01 F 1 8 8 16 8.8.16 [3.17.38.11] CAKEKKYTAMDSGYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagaaaagaagtatacagctatggacagtggatactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3391 3390 M02948:184:000000000-JK6TB:1:2117:20423:9014_1:N: productive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt 97.31 217/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKGHHCSSTSCSFDFW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT at codon 55 of V-REGION: 'GGCTGGAGTGGGTCTCAA' (18 nucleotides at position 84 to 101 in the user submitted sequence), (do not cause frameshift); tgcagcctctggattcacctttagcaactatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagGGCTGGAGTGGGTCTCAActattagtgggagtggtggtagcccatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacactctgtatctccaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggccaccattgtagtagtaccagctgctcttttgacttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3392 3391 M02948:184:000000000-JK6TB:1:2117:17784:9622_1:N: productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARDLCSSTSCYWFDPW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatctttgtagtagtaccagctgctactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3393 3392 M02948:184:000000000-JK6TB:1:2117:25190:9832_1:N: productive Homsap IGHV1-24*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*02 F 3 8 8 14 8.8.14 [2.17.38.11] CARARATLGKGDIDYW in-frame + gtttccggatacaccctcactgatttatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcccgagctactctcgggaagggggatattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3394 3393 M02948:184:000000000-JK6TB:1:2117:12985:10352_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 3 8 8 16 8.8.16 [3.17.38.11] CASMVRGAHYPEYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtatggttcggggagctcattaccctgagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3395 3394 M02948:184:000000000-JK6TB:1:2117:11873:10527_1:N productive Homsap IGHV1-8*01 F 1095 95.78 227/237 nt Homsap IGHJ6*02 F 215 90.38 47/52 nt Homsap IGHD2-21*01 F 3 8 8 9 8.8.9 [8.17.38.11] CARGVNGTDVW in-frame + gtgaaggtctccttcaaggcctctggatacaccctcaccagtaatgatatcaactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaatagtggcaacacaggctatgcacagaacttccagggcagactcaccatgaccagggacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgtgaacggtacggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 328 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3396 3395 M02948:184:000000000-JK6TB:1:2117:7021:10542_1:N: productive Homsap IGHV3-30-3*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD5-18*01 F 3 8 8 17 8.8.17 [3.17.38.11] CARDWYVGYYYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagcaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagattggtacgtcggttactactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3397 3396 M02948:184:000000000-JK6TB:1:2117:26109:10629_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD5-24*01 ORF 3 8 8 18 8.8.18 [3.17.38.11] CARTRDGYNYGRSNWYFDLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacggcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagtaccgcctacctgcagtggagcagcctgaaggcctcagacaccgccatgtattactgtgcgaggactagagatggctacaattacgggagaagtaactggtacttcgatctctggggctgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3398 3397 M02948:184:000000000-JK6TB:1:2117:8798:10843_1:N: productive Homsap IGHV3-21*04 F 1061 97.31 217/223 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD6-13*01 F 1 8 8 18 8.8.18 [3.17.38.11] CARVECSSWAYYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagtggagtgcagcagctgggcttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3399 3398 M02948:184:000000000-JK6TB:1:2117:27026:11913_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-3*01 F 1 8 8 15 8.8.15 [3.17.38.11] CASLRFLEWSFDAFDIW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagcctacgatttttggagtggtcatttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3400 3399 M02948:184:000000000-JK6TB:1:2117:20964:12560_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1068 98.63 216/219 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD1-26*01 F 3 8 8 17 8.8.17 [2.17.38.11] CARAHSGSYYYYYYYMDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagctcacagtgggagctactactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3401 3400 M02948:184:000000000-JK6TB:1:2117:11694:12684_1:N unproductive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 2 8 8 X 8.8.X [2.17.38.11] CATAVGAAPR#FDYW out-of-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagctgttggagcggcccctcgggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 352 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3402 3401 M02948:184:000000000-JK6TB:1:2117:22665:13050_1:N productive Homsap IGHV3-7*01 F 1079 98.21 219/223 nt Homsap IGHJ5*02 F 75 60.78 31/51 nt Homsap IGHD3-9*01 F 3 8 8 8 8.8.8 [3.17.38.11] CARGGLDTAL in-frame + TRP 118 not identified tgcagcctctggattcacttttagtagttattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatattatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattgtgcgagaggcggactggatacagctctggttaggggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3403 3402 M02948:184:000000000-JK6TB:1:2117:17417:13195_1:N No rearrangement found Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccaaggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaaatccagtggctgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 302 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3404 3403 M02948:184:000000000-JK6TB:1:2117:25110:13712_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-24*01 ORF 2 8 8 8 8.8.8 [3.17.38.11] CARGWAPDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgcggacacggctgtgtattactgtgcgagaggatgggctcctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3405 3404 M02948:184:000000000-JK6TB:1:2117:19788:13883_1:N productive Homsap IGHV1-8*03 F 957 92.34 205/222 nt Homsap IGHJ6*04 F 201 88.24 45/51 nt Homsap IGHD3-16*02 F 2 8 8 8 8.8.8 [3.17.38.11] CARDWDTDVW in-frame + aagggttctggatacaggtttaccagctactatatgcactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctttacacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagattgggatactgacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3406 3405 M02948:184:000000000-JK6TB:1:2117:20133:13919_1:N productive Homsap IGHV3-9*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-21*01 F 2 8 8 12 8.8.12 [3.17.38.11] CNVGGGDGDAFAYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacaccgccttgtattactgtaacgtaggtggtggtgatggtgatgcttttgcttactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3407 3406 M02948:184:000000000-JK6TB:1:2117:29540:14616_1:N unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-22*01 F 1 8 8 X 8.8.X [2.17.38.11] CATYYDSSG*LC#W out-of-frame + rearranged sequence, stop codons gcttctggaggcaccttcggcaactatgctattttctgggtgtgacaggtccctggacaagggcttgagtggatgggagggatcaaccctatgtttgggacagcaaacttcgtacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacttactatgatagtagtggttaactctgcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 349 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3408 3407 M02948:184:000000000-JK6TB:1:2117:3875:15168_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-17*01 F 2 8 8 13 8.8.13 [3.17.38.11] CAKGKNEGYGDYDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggaagaacgaaggctacggtgactacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3409 3408 M02948:184:000000000-JK6TB:1:2117:12887:15711_1:N productive Homsap IGHV1-69*17 F 1014 95.89 210/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD6-6*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARGRIAARFSRYFWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtatagcaaactacgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtcgaatagcagctcgtttctcgaggtatttctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3410 3409 M02948:184:000000000-JK6TB:1:2117:6806:16004_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD6-6*01 F 2 8 7 19 8.7.19 [3.17.38.11] CARDQGIAARSGYYYYYMDVW in-frame + cgctgactatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagatcagggtatagcagctcgctcgggctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3411 3410 M02948:184:000000000-JK6TB:1:2117:20975:16879_1:N productive Homsap IGHV5-51*01 F 1208 98.79 244/247 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [11.17.38.11] CARPGDGYYDSSGLYDAFDIW in-frame + cggtgggtctctgcagatctcctgtaagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacccggggacggttactatgatagtagtggtttatatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3412 3411 M02948:184:000000000-JK6TB:1:2117:20491:17274_1:N productive Homsap IGHV1-8*01 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-15*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARGLGYCSGGSCYSDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcaagaggtctaggatattgtagtggtggtagctgctactccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3413 3412 M02948:184:000000000-JK6TB:1:2117:28270:18595_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-12*01 F 3 8 8 8 8.8.8 [3.17.38.11] CARKGGHDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctcagagccgaggacacggctgtgtattactgtgcgagaaagggtggccatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3414 3413 M02948:184:000000000-JK6TB:1:2117:19476:18900_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1064 98.18 216/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD7-27*01 F 2 8 7 13 8.7.13 [3.17.38.11] CARGDNTQRRGIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctcccttaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccccgaagttgacctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcgacaacacccaaagacgggggattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3415 3414 M02948:184:000000000-JK6TB:1:2117:22465:19750_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDQRSIAVAGKGHDYW in-frame + gcttctggaggcaccttcagtagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattattgtgcgagagatcagcgttcgatagcagtggctggtaagggacatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3416 3415 M02948:184:000000000-JK6TB:1:2117:10454:19871_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARGPGVPTDSDYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcccaggggttcccaccgactctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3417 3416 M02948:184:000000000-JK6TB:1:2117:24170:21989_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD5-24*01 ORF 3 8 8 14 8.8.14 [3.17.38.11] CARVTRAGYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagttaccagagctggctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3418 3417 M02948:184:000000000-JK6TB:1:2117:22993:22273_1:N productive Homsap IGHV3-48*03 F 1177 97.18 241/248 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [11.17.38.11] CAREPCSGGNCWFDRW in-frame + ctcgggggtcccttagaccctcctgtgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattggtagtagtggcaataccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtaactgctggttcgaccgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3419 3418 M02948:184:000000000-JK6TB:1:2117:18851:23201_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1023 96.35 211/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-3*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARDSRVLRFLEGPDHAFDIW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattcccgtgtattacgatttttggaggggcctgaccatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3420 3419 M02948:184:000000000-JK6TB:1:2101:13469:2714_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-3*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARARGFWSGYEYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagcaagggggttttggagtggttatgaatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3421 3420 M02948:184:000000000-JK6TB:1:2101:23714:3243_1:N: unproductive (see comment) Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1046 97.27 214/220 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-3*01 F 2 8 7 21 8.7.21 [3.17.38.11] CARAYDFWSGYYRNYYYYGMDVW in-frame + rearranged sequence, stop codons cgctgtctatggtgggtccttcagtggttactactagagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcgagagcatacgatttttggagtggttattatcggaactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3422 3421 M02948:184:000000000-JK6TB:1:2101:15872:3948_1:N: productive Homsap IGHV3-9*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD3-16*01 F 3 8 8 6 8.8.6 [3.17.38.11] CLIPNGDW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctaagagctgaggacacggccttgtattactgtcttataccaaacggtgattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3423 3422 M02948:184:000000000-JK6TB:1:2101:6858:4054_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 3 8 8 16 8.8.16 [2.17.38.11] CARGGAIPKPYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcggtgccatcccaaagccctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3424 3423 M02948:184:000000000-JK6TB:1:2101:8227:4323_1:N:0 productive Homsap IGHV3-30*06 F 1070 97.76 218/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-22*01 F 3 8 8 19 8.8.19 [3.17.38.11] CARAGYGILVVITTSGVFDIW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaattaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgttgtatctgcaaatgaacagcctgagaactgaggacacggcgatgtattactgtgcgagagcagggtatgggatactagtggttattactacgagtggtgtttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3425 3424 M02948:184:000000000-JK6TB:1:2101:9197:5119_1:N:0 productive Homsap IGHV1-18*01 F 1032 96.80 212/219 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [2.17.38.11] CAREIYCSSTSCVYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagtctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagagatatattgtagtagtaccagctgcgtatactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3426 3425 M02948:184:000000000-JK6TB:1:2101:15736:5185_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD2-8*01 F 2 8 8 25 8.8.25 [2.17.38.11] CARDGYCTNGVCYQPPTTIGYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatggatattgtactaatggtgtatgctatcaaccccctactactatcggctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3427 3426 M02948:184:000000000-JK6TB:1:2101:21953:5205_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-19*01 F 1 8 8 17 8.8.17 [3.17.38.11] CARLRAGYSSGWVPPAVYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttcgagccgggtatagcagtggctgggtccccccagcggtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3428 3427 M02948:184:000000000-JK6TB:1:2101:11940:5945_1:N: productive Homsap IGHV3-33*08 F 1199 96.48 247/256 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [14.17.38.11] CARDWDGFGSGMGAFDIW in-frame + cgctgtctatggggggtccctgagactctcctgtgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagattgggatgggtttggttcggggatgggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagagttcccctcgcgatat 0 0 399 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3429 3428 M02948:184:000000000-JK6TB:1:2101:4222:5971_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1213 98.79 245/248 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [11.17.38.11] CAKDAHDYYGSEYFDYW in-frame + cttgggggacccttagactctcctgtgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagacgcccacgattactatggttcggagtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3430 3429 M02948:184:000000000-JK6TB:1:2101:7917:6398_1:N:0 productive Homsap IGHV4-59*12 (F) 1064 98.18 216/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-9*01 F 1 8 7 22 8.7.22 [3.17.38.11] CARGRVVELRYFDWLSFKYAFDIW in-frame + cactgtctctggtgtctccatcagtagttacttctggagctggatccggcagcccccagggaagggactggagtggattgggcatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgtgtcgtagagttacgatattttgactggttatccttcaaatatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3431 3430 M02948:184:000000000-JK6TB:1:2101:8006:6724_1:N:0 productive (see comment) Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1145 100.00 229/229 nt 99.56 228/229 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD6-19*01 F 2 8 10 19 8.10.19 [3.17.38.11] CARTRGAVAGTGVPRGAFDIW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT at codon 74 of V-REGION: 'T' (1 nucleotides at position 138 to 138 in the user submitted sequence), (cause frameshift); tgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcacccgtgaaagTgcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtgcgaggacccgcggagcagtggctggtaccggagtcccccgaggcgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgcccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3432 3431 M02948:184:000000000-JK6TB:1:2101:24263:6751_1:N: productive Homsap IGHV4-39*07 F 959 91.59 207/226 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-26*01 F 3 10 7 13 10.7.13 [3.17.38.11] CAGVSGTFYGAFKFW in-frame + cagtgtctctggtggctccgtcatcagtggtagttactactggaactggatccggcagcccccagggaaggggctggagtggattgccagtatctatcatagtggaaacacctactacgacccgtccctccagagtcgaatcaccatatcagtagacacgtccaagaatcagttctccctggagctgagctctgtgaccgccgcagacacggccgtctattactgtgcgggagtaagtgggaccttctatggtgcctttaagttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3433 3432 M02948:184:000000000-JK6TB:1:2101:17109:7005_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARVGPAATNYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagtaggaccagctgctactaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3434 3433 M02948:184:000000000-JK6TB:1:2101:16422:7169_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-1*01 F 1 8 8 9 8.8.9 [3.17.38.11] CARDTAGFEYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtggcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagatacagccgggtttgaatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3435 3434 M02948:184:000000000-JK6TB:1:2101:20648:7588_1:N: productive Homsap IGHV3-11*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 1 8 8 11 8.8.11 [3.17.38.11] CARELDAVSIDYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaatgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagagttggatgcagttagcattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3436 3435 M02948:184:000000000-JK6TB:1:2101:23509:9119_1:N: unproductive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-7*01 F 3 8 8 X 8.8.X [3.17.38.11] CARAGIGISGT#DYW out-of-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagggcggggataggtataagtggaactatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3437 3436 M02948:184:000000000-JK6TB:1:2101:5050:9619_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*02 F or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 693 97.92 141/144 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD5-18*01 F 1 X 8 15 X.8.15 [X.2.38.11] CARHVDTGMVFYGMEVW in-frame + gggatcatctatcctggtgactctgataccagatacaggccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagtaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatatattactgtgcgagacatgtggatacaggtatggtcttctacggtatggaagtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 253 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3438 3437 M02948:184:000000000-JK6TB:1:2101:22364:9994_1:N: productive Homsap IGHV3-48*04 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F 245 91.38 53/58 nt 8 8 11 8.8.11 [3.17.38.11] CARDQGYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcatcatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcaaggctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3439 3438 M02948:184:000000000-JK6TB:1:2101:19946:10291_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 962 92.38 206/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 2 8 8 14 8.8.14 [3.17.38.11] CARGKPGDAGTNPDYW in-frame + tgcagcctctggcttcaccttcagtacctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagaaaatgccaagaactccttgtatcttcaaatgaacagcctgacagccgcggacacggctatatattactgtgcaagaggcaaacctggtgacgccgggacgaaccccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3440 3439 M02948:184:000000000-JK6TB:1:2101:25317:11123_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARPDCGSSTSCYGPVDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctgatgactctgacaccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccggattgtggtagtagtaccagctgctatggtcccgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3441 3440 M02948:184:000000000-JK6TB:1:2101:16941:11581_1:N productive Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-3*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARELNDFWSGYDFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatgctacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaactgaacgatttttggagtggctacgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3442 3441 M02948:184:000000000-JK6TB:1:2101:26916:13120_1:N productive Homsap IGHV1-8*01 F 1005 95.43 209/219 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARALISNEDYYMDVW in-frame + gcttctggatacaccttcatcagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagccctaatatcaaacgaggactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3443 3442 M02948:184:000000000-JK6TB:1:2101:25542:13519_1:N No rearrangement found Homsap IGHV3-48*03 F 998 94.17 210/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcaccttcgggagttacgaaatgagttgggtccgccaggctccggggaaggggctggagtgggtttcatacattaggagtgatggtggtaccacatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtctatcactgtgttgctagtctcctgtgagaattcccctcgcgatat 0 0 259 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3444 3443 M02948:184:000000000-JK6TB:1:2101:24663:13944_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD5-18*01 F 1 8 8 16 8.8.16 [3.17.38.11] CAAPDTAMEQGINWFDPW in-frame + tgccgcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcggcacccgatacagctatggaacaggggatcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3445 3444 M02948:184:000000000-JK6TB:1:2101:14275:14169_1:N productive Homsap IGHV4-38-2*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-10*01 F 2 9 7 10 9.7.10 [3.17.38.11] CARGSGQLPDYW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggctcggggcagctcccggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3446 3445 M02948:184:000000000-JK6TB:1:2101:26189:15033_1:N productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-22*01 F 2 8 8 27 8.8.27 [2.17.38.11] CARVTYYYDSSGYYYDSSGYYYTGAGPYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtaacgtattactatgatagtagtggttattactatgatagtagtggttattactacacaggggccggtccctactggggccagggaaccctggtcaccgtctcctcagggggtgcatccgccccaacccttttccccctcgtctcctgtgagaatttccctcgcgatat 0 0 395 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3447 3446 M02948:184:000000000-JK6TB:1:2101:12029:15104_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F (see comment) 211 82.26 51/62 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARHTDRSYGGYYYGMDVW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ5*02 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatactgatcggagttacggggggtactactacggtatggacgtctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3448 3447 M02948:184:000000000-JK6TB:1:2101:15534:15828_1:N unproductive (see comment) Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-2*02 F 2 8 8 X 8.8.X [3.17.38.11] CARDCPLL**YQLL##YYYYMDVW out-of-frame + rearranged sequence, stop codons tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagattgccccttattgtagtagtaccagctgctataactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 382 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3449 3448 M02948:184:000000000-JK6TB:1:2101:27721:16080_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*02 F 2 8 8 9 8.8.9 [3.17.38.11] CARDVPFLDYW in-frame + tgcagcctctggattcaccttcagtagctataacatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtatattactgtgcgagagatgttccgttccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3450 3449 M02948:184:000000000-JK6TB:1:2101:3891:16088_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1208 98.79 244/247 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [11.17.38.11] CARHHYYDNSGYYGYW in-frame + aggggagtctcagcagatctcctgtaagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatcattactatgataatagtggttattatggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3451 3450 M02948:184:000000000-JK6TB:1:2101:28128:16793_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*05 F or Homsap IGHV3-33*06 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [3.17.38.11] CVRDGGGRHCRGGSCYYFDYW in-frame + tgcagcgtctggattcaccttcagtgactatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatgtactataatggaaagaatgagtattatgcagactccgtgaagggccgattcaccatctccagagacaattcctactacacgctgtatttgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgtgagagatggggggggacgacattgtagaggtggtagctgctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3452 3451 M02948:184:000000000-JK6TB:1:2101:26815:16924_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1088 98.65 220/223 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-21*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARRSGFRSQYYYYMDVW in-frame + tgcggcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcaaggagatcgggatttagatcccaatactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3453 3452 M02948:184:000000000-JK6TB:1:2101:11385:16925_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAAHTSESGSYYNDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccacctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcggcccatacctctgaaagtgggagctactacaacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3454 3453 M02948:184:000000000-JK6TB:1:2101:24016:17375_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1108 94.69 232/245 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-3*01 F 2 8 8 17 8.8.17 [10.17.38.11] CAKNRDYDFWSGYGYFDYW in-frame + gggggtccctgaatctctcctgtgcagcctctggattcgctttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaatagggattacgatttttggagtggttacggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3455 3454 M02948:184:000000000-JK6TB:1:2101:19820:19113_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*02 F or Homsap IGHV1-46*03 F 640 90.32 140/155 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD3-16*02 F 2 X 8 14 X.8.14 [X.5.38.11] CATDSRHSGYWYFDLW in-frame + atatcgcgaggggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagattctcgccatagtggctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 261 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3456 3455 M02948:184:000000000-JK6TB:1:2101:14585:19115_1:N productive Homsap IGHV1-8*01 F 1050 97.72 214/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-21*02 F 2 8 8 15 8.8.15 [2.17.38.11] CATPLNCGGDCGSPDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgacacccctaaattgtggtggtgactgcggtagccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3457 3456 M02948:184:000000000-JK6TB:1:2101:27634:19341_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-2*01 F 3 8 8 19 8.8.19 [2.17.38.11] CARGPNDIVVVPAAMIWFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggcccaaatgatattgtagtagtaccagctgctatgatctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3458 3457 M02948:184:000000000-JK6TB:1:2101:16174:20538_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARYRYCSSTSCENFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggtaccgatattgtagtagtaccagctgcgagaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3459 3458 M02948:184:000000000-JK6TB:1:2101:16175:21012_1:N productive Homsap IGHV4-4*07 F 1028 96.36 212/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 7 20 8.7.20 [3.17.38.11] CARAPTQRISGDSSGYSLFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccgccgggaaggggctggagtggattgggcgtatctatagtactgggaacacaaactacaacccctccctcaagagtcgagtcaccatgtcattagacacgtccaagaaccagttctccctgaagctgaactctgtgaccgccgcggacacggccgtgtattactgtgcgagagcgcccactcagcggatctcgggtgatagtagtggttattctctgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3460 3459 M02948:184:000000000-JK6TB:1:2101:26753:21450_1:N productive Homsap IGHV3-48*03 F 1195 97.98 243/248 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-22*01 F 2 8 8 21 8.8.21 [11.17.38.11] CARGGDSSGYYHYAYYYYGMDVW in-frame + cttggtgttccctgatactctcctgtgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaggaggtgatagtagtggttattaccactacgcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3461 3460 M02948:184:000000000-JK6TB:1:2101:17816:22201_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-6*01 F 1 8 8 12 8.8.12 [3.17.38.11] CANEYSSSGPIDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgaacgagtatagcagctccggccctattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtagaatgcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3462 3461 M02948:184:000000000-JK6TB:1:2101:12299:23564_1:N productive Homsap IGHV1-18*01 F 1047 96.85 215/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 10 8.8.10 [3.17.38.11] CALDSSGDFDYW in-frame + aaggcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagtctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgctcgatagtagtggggattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3463 3462 M02948:184:000000000-JK6TB:1:1119:16490:2629_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-24*01 ORF 3 8 8 13 8.8.13 [2.17.38.11] CVRKLGADGYNCDYW in-frame + gcttctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgtgcgaaagctcggggcagatggctacaattgcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3464 3463 M02948:184:000000000-JK6TB:1:1119:16725:4366_1:N: productive Homsap IGHV3-48*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-24*01 ORF 3 8 8 11 8.8.11 [3.17.38.11] CASDRGNDYSYYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcctccgaccggggaaatgactacagttactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3465 3464 M02948:184:000000000-JK6TB:1:1119:8285:5463_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 193 84.91 45/53 nt Homsap IGHD2-8*02 F 3 8 8 8 8.8.8 [2.17.38.11] CAKRADMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaaacgggcggacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3466 3465 M02948:184:000000000-JK6TB:1:1119:21318:6352_1:N: productive Homsap IGHV3-48*03 F 926 90.58 202/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKVVDVVPAASIDYW in-frame + tgctgcctctggatacatcttcagtcgttatgaaatgaactggctccgccaggctccaggaaaggggctggaatggctttcatacattagtggtggtggtgagacaggactctacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggtggacgtagtaccagctgcttctattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3467 3466 M02948:184:000000000-JK6TB:1:1119:25783:7673_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-12*01 F 3 8 8 16 8.8.16 [2.17.38.11] CASYLYSGYDSAPYFDYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagttatttatatagtggctacgattcagccccttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3468 3467 M02948:184:000000000-JK6TB:1:1119:23283:8503_1:N: productive Homsap IGHV1-2*02 F 1068 98.63 216/219 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD3-9*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARNPYYDILTGYRYWNFDLW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcctgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggaactgagcaggctgacatctgacgacacggccgtgtattactgtgcgaggaacccgtattatgatattttgactggttaccgctactggaacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3469 3468 M02948:184:000000000-JK6TB:1:1119:13842:8703_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 8 8.8.8 [3.17.38.11] CARAPYYGYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccacctccggagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagccccctactacggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3470 3469 M02948:184:000000000-JK6TB:1:1119:20409:9510_1:N: No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F (see comment) 530 70.85 158/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found low V-REGION identity (70.85%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtatattactgtgcgagtaacaattacgattttatcccgcgagaggtgtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgcctcaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 288 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3471 3470 M02948:184:000000000-JK6TB:1:1119:14862:10056_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1028 96.36 212/220 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt Homsap IGHD3-22*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARGLRYYYDSSGTRYFDLW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattgggtatatctattacagtgggagcaccaactacaacccctcccttaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcttgaggtattactatgatagtagtggtaccaggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3472 3471 M02948:184:000000000-JK6TB:1:1119:7561:10075_1:N: productive Homsap IGHV3-30*07 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-3*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAKSFGMGHYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccaattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatccttcgggatggggcactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3473 3472 M02948:184:000000000-JK6TB:1:1119:26452:10358_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*02 F 3 8 8 17 8.8.17 [3.17.38.11] CARVVVPAAIFDYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgacatgaactgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtggtagtggtggtagcacatattacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacatgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagtggtagtaccagctgctatattcgactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3474 3473 M02948:184:000000000-JK6TB:1:1119:17732:10401_1:N productive Homsap IGHV1-18*01 F 1050 97.72 214/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [2.17.38.11] CAREKSRGSYGRDAFDIW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaaaagtcccgtgggagctacggacgcgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3475 3474 M02948:184:000000000-JK6TB:1:1119:11486:10788_1:N unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1056 97.30 216/222 nt Homsap IGHJ3*01 F, or Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD2-15*01 F 2 8 8 X 8.8.X [3.17.38.11] CARVLQWWRLLLE#AFDFW out-of-frame + rearranged sequence, stop codons aagggttctggatatagctttagcaactactggatcgcctgggtgcgccagatgcccgggaaaggcctggagtggatgggcatcatctatcctggtgactctaataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggttttgcagtggtggcgactgcttctcgaacgcttttgatttctggggccatgggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3476 3475 M02948:184:000000000-JK6TB:1:1119:15839:11616_1:N unproductive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 3 8 8 X 8.8.X [2.17.38.11] CARGGQ#YFDYW out-of-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgggcagactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 343 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3477 3476 M02948:184:000000000-JK6TB:1:1119:29688:12535_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD5-18*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARRIRGYGNYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatgtggatcatctatcctggtgactctgataccagataccgcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggattcgtggatacgggaactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3478 3477 M02948:184:000000000-JK6TB:1:1119:29160:13442_1:N productive Homsap IGHV1-24*01 F 969 93.61 205/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 13 8.8.13 [2.17.38.11] CVKYCTTTSCSEDYW in-frame + gcttctggataccccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgcgtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgttaaatattgtactactaccagctgctccgaggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccacaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3479 3478 M02948:184:000000000-JK6TB:1:1119:22605:13895_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [3.17.38.11] CVTGVRGVTNFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgtaactggggttcggggagttaccaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatttccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3480 3479 M02948:184:000000000-JK6TB:1:1119:5302:15607_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F (see comment) 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAKDKDASSGYYLGAIDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagataaggatgctagtagtggttattacctaggagccattgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3481 3480 M02948:184:000000000-JK6TB:1:1119:19157:15647_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-16*02 F 2 8 8 8 8.8.8 [3.17.38.11] CARGGNLDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcaatggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagggggtaatcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3482 3481 M02948:184:000000000-JK6TB:1:1119:19193:16928_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1019 95.91 211/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-3*01 F 1 8 7 10 8.7.10 [3.17.38.11] CARGFSYAFDIW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagagctcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttactactgtgcgagaggattttcgtatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3483 3482 M02948:184:000000000-JK6TB:1:1119:11714:17396_1:N productive (see comment) Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 971 92.83 207/223 nt 92.38 206/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-8*01 F 1 8 8 7 8.8.7 [3.17.38.11] CAKLPMGDW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT at codon 36 of V-REGION: 'ACT' (3 nucleotides at position 26 to 28 in the user submitted sequence), (do not cause frameshift); tgcggcctctggattcagcttcagtACTaactactggatggactgggtccgccaagctcctgggaaggggctggtgtgggtctcacgtattaacactgatgggagtggcgcaaattacgcggacgccgtgaggggccgattcaccatctccagggacagcgccaagaacactctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcgaaattgcctatgggtgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3484 3483 M02948:184:000000000-JK6TB:1:1119:8710:19071_1:N: productive Homsap IGHV3-21*04 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD3-16*02 F 3 8 8 19 8.8.19 [3.17.38.11] CARDGITFGGVITLDYGMDVW in-frame + tgcagcctctggattcaccttcagtagttatagcctgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatgggattacgtttgggggagttatcactttggactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3485 3484 M02948:184:000000000-JK6TB:1:1119:11777:20516_1:N productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 925 100.00 185/185 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-22*01 F 3 X 8 17 X.8.17 [X.15.38.11] CARVRATMIVVVNDWFDPW in-frame + gctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtccgcgctactatgatagtagtggttaacgactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 300 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3486 3485 M02948:184:000000000-JK6TB:1:1119:22172:20522_1:N productive Homsap IGHV4-61*01 F 1112 99.12 224/226 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-13*01 F 3 10 7 20 10.7.20 [3.17.38.11] CAREGEQQLYPRLVYYYGMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtacaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagaaggggagcagcagctgtacccacggttggtatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3487 3486 M02948:184:000000000-JK6TB:1:1119:11566:21201_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARERIVVVPAASGYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaaaggattgtagtagtaccagctgctagcggttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3488 3487 M02948:184:000000000-JK6TB:1:1119:20941:21352_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-10*01 F 2 8 7 16 8.7.16 [3.17.38.11] CAKDLAYYYGSGTYFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcctattactatggttcggggacatactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3489 3488 M02948:184:000000000-JK6TB:1:1119:17228:23268_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-26*01 F 2 8 7 11 8.7.11 [3.17.38.11] CARGEWELTPDYW in-frame + cactgtctctggtggctccatcagaagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccgactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggggagtgggagcttacacctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3490 3489 M02948:184:000000000-JK6TB:1:1119:13077:23359_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F or Homsap IGHV4-34*08 F 806 99.39 162/163 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD5-12*01 F 1 X 7 23 X.7.23 [X.9.38.11] CARDFPELGTVTTWPYYYYYYMDVW in-frame + agggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgacctctgtgaccgccgcggacacggctgtgtattactgtgcgagagattttccggagttgggtacggtgactacgtggccttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 296 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3491 3490 M02948:184:000000000-JK6TB:1:1119:8097:23416_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD4-17*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARPTTVTDYSFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgcctctgataccaaatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctccagtggagcaccctgaaggcctcggacaccgccatgtattactgtgcgagacctactacggtgacggattatagttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3492 3491 M02948:184:000000000-JK6TB:1:1119:6712:23570_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-22*01 F 2 8 7 21 8.7.21 [3.17.38.11] CARDTDYYDSSGYQYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatacggattactatgatagtagtggttatcaatactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3493 3492 M02948:184:000000000-JK6TB:1:1116:14459:2220_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1088 98.65 220/223 nt Homsap IGHJ5*02 F 183 84.31 43/51 nt Homsap IGHD6-13*01 F 1 8 8 16 8.8.16 [3.17.38.11] CAKAHPSYSSSGGLFDPW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaagggctggagtgggtggcggttatatggtttgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaaagcccacccctcgtatagcagcagcggagggctgttcgacccctggggccagggaaccatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3494 3493 M02948:184:000000000-JK6TB:1:1116:12925:2490_1:N: productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARGRFLEWLGDFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggacgatttttggagtggttaggagactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3495 3494 M02948:184:000000000-JK6TB:1:1116:6987:4145_1:N:0 productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD5-12*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARAVATWGDAFDIW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagggcggtggctacgtggggtgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcattcgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3496 3495 M02948:184:000000000-JK6TB:1:1116:20072:4938_1:N: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1081 97.36 221/227 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-13*01 F 1 8 10 13 8.10.13 [2.17.38.11] CTTATRGSWNYLDYW in-frame + cagcctctggattcactttcaataatgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccatattaaaagtaaaaatgatggtgggacaacagactacgctgcacccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcaaatggacagcctgaaaaccgaggacacagccgtgtattactgtaccacagccacccggggcagctggaactaccttgactactggggccagggaaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 361 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3497 3496 M02948:184:000000000-JK6TB:1:1116:18658:5980_1:N: productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAKGGGYCSGGSCYSDAFDIW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgaaaggggggggatattgtagtggtggtagctgctactctgatgcttttgatatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3498 3497 M02948:184:000000000-JK6TB:1:1116:7521:8373_1:N:0 productive Homsap IGHV3-43*01 F, or Homsap IGHV3-43D*04 F 953 91.93 205/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARDLSYSGSGTSAYW in-frame + tgcagcctctggattcacctttgatgattattccatgtactgggtccgtcaaggtccggggaagggtctggagtgggtctctcttattagttgggatggtggtagcacacactatgcagactctgtgaagggccgattcaccatctccagggacaactccaagaattcactgtatctgcaaatgaacagcctgggagccgaggacacggctgtttattactgtgcgagagacttaagttactctggttcggggacttctgcgtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3499 3498 M02948:184:000000000-JK6TB:1:1116:12219:8786_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD2-15*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAKGKRWELLYYFDYW in-frame + tgcagcctctggattcacctttagcaactatgccatgacctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagttatagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagggacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagggaagcggtgggagctactgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3500 3499 M02948:184:000000000-JK6TB:1:1116:8039:9189_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ6*03 F 283 95.16 59/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARGCSSSTSCYHSYYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaggggctgtagtagtagtaccagctgctatcacagctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3501 3500 M02948:184:000000000-JK6TB:1:1116:3313:9810_1:N:0 productive Homsap IGHV1-3*04 (F) 1005 95.43 209/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARDEDIVVVSYYYYGMDVW in-frame + gcttctggatacaccttcactacctataatatacattgggtgcgccaggcccccggacaaaggcttgagtggatggggtggatcaacactggcaatggtaacacaaaatattcacagaagttccaggccagagtcaccattgccagggacacatccgcgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatgaagatattgtagtagtatcgtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3502 3501 M02948:184:000000000-JK6TB:1:1116:11693:10857_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 875 100.00 175/175 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-8*01 F 3 X 8 17 X.8.17 [X.12.38.11] CAIKPPSSLVRYYYGMDVW in-frame + ccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgatcaaacccccctccagccttgtacgctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 290 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3503 3502 M02948:184:000000000-JK6TB:1:1116:12515:11401_1:N productive Homsap IGHV3-11*04 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 178 84.00 42/50 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARESYDSSGFYGSSAFYSW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacaacctgagagccgaggacacggctgtgtattactgtgcgagggagtcctatgatagtagtggtttttacggctcgagcgctttttatagctggggccaagggacaatggtcatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3504 3503 M02948:184:000000000-JK6TB:1:1116:7043:12970_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*01 F 2 8 8 14 8.8.14 [2.17.38.11] CYCSSTSDRRGYFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgctattgtagtagtaccagcgatcgaaggggttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3505 3504 M02948:184:000000000-JK6TB:1:1116:10649:14074_1:N productive Homsap IGHV1-2*04 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-15*01 F 2 8 8 10 8.8.10 [2.17.38.11] CATFRGGRFDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgaggacacggccgtgtattactgtgcaacttttcgtggcggcaggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3506 3505 M02948:184:000000000-JK6TB:1:1116:15360:14614_1:N productive Homsap IGHV4-39*01 F, or Homsap IGHV4-39*05 F or Homsap IGHV4-39*08 (F) or Homsap IGHV4-59*04 F or Homsap IGHV4-59*05 F (see comment) 1019 95.91 211/220 nt Homsap IGHJ6*04 F 270 92.06 58/63 nt Homsap IGHD6-13*01 F 1 8 7 19 8.7.19 [3.17.38.11] CARLYSSSWYVGYYYYGMDVW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR1-IMGT amino acid lengths (8 AA in M02948:184:000000000-JK6TB:1:1116:15360:14614_1:N; 10 AA in Homsap IGHV4-39*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggactatctattatagtggggccacctcctacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgaactctgtgaccgccgcagacacggctgtctattactgtgcgagactgtatagcagcagctggtacgtggggtactactactacggtatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3507 3506 M02948:184:000000000-JK6TB:1:1116:29233:14805_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-9*01 F 2 8 8 23 8.8.23 [3.17.38.11] CARPPLWNYDILTGLDYGEDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaccccccctctggaattacgatattttgactggtttggattatggggaggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3508 3507 M02948:184:000000000-JK6TB:1:1116:6275:15237_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD4-17*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARGSPYGDYEAGDAFDIW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggttccccgtacggtgactacgaggcgggggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3509 3508 M02948:184:000000000-JK6TB:1:1116:19267:15526_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-1*01 F 2 10 7 11 10.7.11 [3.17.38.11] CARELGQGGFDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagagttgggacaaggaggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3510 3509 M02948:184:000000000-JK6TB:1:1116:23282:15666_1:N productive Homsap IGHV1-8*01 F 1023 96.35 211/219 nt Homsap IGHJ1*01 F (see comment) 145 78.72 37/47 nt Homsap IGHD6-19*01 F 1 8 8 7 8.8.7 [2.17.38.11] CARGGWWEW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaggttggtgggagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3511 3510 M02948:184:000000000-JK6TB:1:1116:22109:16386_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1046 97.27 214/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-3*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARDPGVVIIEPLDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctacagctgagctctgtgattcccgaggacacggctgtgtattactgtgcgagagatcccggagtggttattatagagcctcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3512 3511 M02948:184:000000000-JK6TB:1:1116:23967:16405_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD4-23*01 ORF 2 8 8 13 8.8.13 [3.17.38.11] CARLDYGGKSHRTCW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagactcgactacggtggtaaatcccaccggacctgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcatctcctgtgagaagtcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3513 3512 M02948:184:000000000-JK6TB:1:1116:11773:16524_1:N No rearrangement found Homsap IGHV1-18*01 F 969 93.61 205/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtgacacaatctatgcacagaagttccagggcagagtcaccatgaccactgacacacccacgagcacagcctacatggagctgcggagcctgagatctgacgacacggccctctattactgtgcgagaggggcagtggctgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 299 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3514 3513 M02948:184:000000000-JK6TB:1:1116:22397:16528_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ1*01 F (see comment) 197 86.54 45/52 nt Homsap IGHD4-23*01 ORF 2 8 8 11 8.8.11 [3.17.38.11] CARDTHSGGFQHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatacgcactccgggggcttccagcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3515 3514 M02948:184:000000000-JK6TB:1:1116:10841:16720_1:N productive (see comment) Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 780 100.00 156/156 nt 99.36 155/156 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD5-24*01 ORF 1 X 8 10 X.8.10 [X.6.37.11] CARAAADAFDIW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT, from codon 99 of V-REGION: 2 nucleotides (from position 141 in the user submitted sequence), (cause frameshift) ggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacggccgtgtattactgtgcgagagcggctgcagatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 250 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3516 3515 M02948:184:000000000-JK6TB:1:1116:6384:16911_1:N: No rearrangement found Homsap IGHV3-33*03 F 1079 98.21 219/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtctattactgtgcaagaggagggggttattgtggtggtggtagctgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 307 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3517 3516 M02948:184:000000000-JK6TB:1:1116:8220:17799_1:N: productive Homsap IGHV2-5*02 F 1245 100.00 249/249 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-13*01 F 3 10 7 17 10.7.17 [11.17.38.11] CAHRRSKQQPHGRHYFDYW in-frame + acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacagacgtagcaagcagcagccccacggacggcactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 395 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3518 3517 M02948:184:000000000-JK6TB:1:1116:2913:18294_1:N: unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69D*01 F 1148 96.72 236/244 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD4-11*01 ORF 3 8 8 18 8.8.18 [10.17.38.11] CARVGPTVTTTRYYYYMDVW in-frame + rearranged sequence, stop codons gggctcggtgaagggctcctgcagggctgcttgaggcacggtcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtagggcctacagtaactaccacccgatactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3519 3518 M02948:184:000000000-JK6TB:1:1116:6061:21880_1:N: productive Homsap IGHV4-39*07 F 1058 96.46 218/226 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD3-10*01 F 1 10 7 19 10.7.19 [3.17.38.11] CASLGERFGEDHYYYYGMDVW in-frame + cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgtccttaggggaaaggttcggggaggatcactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccacctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3520 3519 M02948:184:000000000-JK6TB:1:1116:20627:23378_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-21*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARLSYDYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggcgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgtcatatgactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3521 3520 M02948:184:000000000-JK6TB:1:1116:13399:24174_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69D*01 F 1166 97.54 238/244 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-22*01 F 2 8 8 22 8.8.22 [10.17.38.11] CARDYYDSSGYPRFDYYYYGMDVW in-frame + gggctcggtgaaagtctcctgcagggctgctggaggcaccgtcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagattactatgatagtagtggttacccgcggttcgactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3522 3521 M02948:184:000000000-JK6TB:1:1116:8277:24487_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD3-10*01 F 3 8 8 12 8.8.12 [2.17.38.11] CAGGQRGYWYFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggggggtcagcgaggttactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3523 3522 M02948:184:000000000-JK6TB:1:1116:11272:24683_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD6-13*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARGYSSSHPYYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgcgggggtatagcagctctcacccctattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3524 3523 M02948:184:000000000-JK6TB:1:1116:16142:25146_1:N productive Homsap IGHV3-7*03 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CAKASSGWYSGEFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactcagtgaagggccgattcaccatctccagagacaattccaagaatacgctgtacctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagctagcagtggctggtactccggggagtttgactactggggccagggaaccccggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3525 3524 M02948:184:000000000-JK6TB:1:1115:21591:3629_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD3-10*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARQGSGSYYLGTPYYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggacacggccgtgtattactgtgcgagacagggttcggggagttattatctgggaaccccctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3526 3525 M02948:184:000000000-JK6TB:1:1115:17841:4945_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 226 89.29 50/56 nt Homsap IGHD2-2*01 F 2 8 8 10 8.8.10 [2.17.38.11] CARGASYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggccagctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3527 3526 M02948:184:000000000-JK6TB:1:1115:4279:5564_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ2*01 F 202 86.79 46/53 nt Homsap IGHD5-18*01 F 1 8 8 11 8.8.11 [2.17.38.11] CARGDTILAFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggggatacgattttggccttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3528 3527 M02948:184:000000000-JK6TB:1:1115:16295:7140_1:N: No rearrangement found Homsap IGHV1-18*01 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggggcagtggctgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 299 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3529 3528 M02948:184:000000000-JK6TB:1:1115:5413:8999_1:N:0 productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD4-17*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARAGTTVTAHAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggctgtgtattactgtgcgagagcagggactacggtgaccgcgcatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3530 3529 M02948:184:000000000-JK6TB:1:1115:9766:11590_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 146 77.55 38/49 nt Homsap IGHD2-8*01 F 1 8 8 7 8.8.7 [3.17.38.11] CARRRMGLW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagacggaggatggggttatggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3531 3530 M02948:184:000000000-JK6TB:1:1115:21028:12272_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARDLPPLDYGDYVSGYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatctcccgcccctcgactacggtgactacgtgtcaggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3532 3531 M02948:184:000000000-JK6TB:1:1115:21701:12525_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD2-2*01 F 2 8 8 24 8.8.24 [2.17.38.11] CASSTGYCSSTSCSSYDYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagctccacaggatattgtagtagtaccagctgctcctcctacgactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3533 3532 M02948:184:000000000-JK6TB:1:1115:4478:12704_1:N: productive Homsap IGHV1-2*02 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARFYSSGRAVDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgagatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagattttacagtagtggtcgagcggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3534 3533 M02948:184:000000000-JK6TB:1:1115:11023:12799_1:N unproductive (see comment) Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1088 98.65 220/223 nt Homsap IGHJ3*01 F (see comment) 124 72.00 36/50 nt Homsap IGHD2-15*01 F 3 8 8 X 8.8.X [3.17.38.11] CARDAPRIL*WW*LLL#W out-of-frame + rearranged sequence, stop codons other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcgtctggattcaccttcagtagctatggcatgaactgggtccgccaggctccaggcaaggggctggagtgggtgccagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggcccattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgcccctaggatattgtagtggtggtagctgctactggttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3535 3534 M02948:184:000000000-JK6TB:1:1115:27965:13478_1:N productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 972 98.99 196/198 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 3 8 18 3.8.18 [X.17.38.11] CARDVDYYDSSGLGYYFDYW in-frame + cggtactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagatgtcgattactatgatagtagtggtttggggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 316 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3536 3535 M02948:184:000000000-JK6TB:1:1115:25129:13666_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD1-1*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARDGPNAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatctattgttggtggtggtggtagcacatactacgcagactccgtgaagggccggttcaccatgtccagagacaacaccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggcccgaatgcttttgatatttggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3537 3536 M02948:184:000000000-JK6TB:1:1115:13702:14337_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD2-2*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARGGYCGSTSCYPLGYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggctggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgggatccgaagacacggctgtgtattactgtgcgagaggaggatattgtggtagtaccagctgctatcctctcgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3538 3537 M02948:184:000000000-JK6TB:1:1115:14296:14608_1:N productive Homsap IGHV1-2*02 F 924 91.32 200/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD1-26*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARVMVGATKHWFDPW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggacaagggcttgagtggatgggatggatcaaccctaacagtggtgacacaaggtatgcacagaagtttcagggtagggtcaccatgaccagggacacgtccattagcacagcctacatggagctgagcaggttgagatctgacgacacggccatatattactgtgcgagagttatggtgggagctactaagcactggttcgacccctggggccagggaaccctggtcatcgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3539 3538 M02948:184:000000000-JK6TB:1:1115:24645:16389_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 3 8 8 16 8.8.16 [3.17.38.11] CAKSYPRGITMIVTHDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccaactccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatcctaccccaggggtattactatgatagtaacacatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3540 3539 M02948:184:000000000-JK6TB:1:1115:3868:16393_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD4-23*01 ORF 3 8 7 12 8.7.12 [3.17.38.11] CARTTTVVTPADYW in-frame + cgctgtctatggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaactactacggtggtaactccggcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3541 3540 M02948:184:000000000-JK6TB:1:1115:6363:16715_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARPHSSGWYEWFSIDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaccccatagcagtggctggtacgagtggttttcgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3542 3541 M02948:184:000000000-JK6TB:1:1115:28461:16775_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 202 86.79 46/53 nt Homsap IGHD1-26*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARVPSGSSDSFDLW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagtaccgagtgggagttccgattcgttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3543 3542 M02948:184:000000000-JK6TB:1:1115:23753:16909_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3544 3543 M02948:184:000000000-JK6TB:1:1115:26753:17348_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-8*01 F 2 8 8 25 8.8.25 [3.17.38.11] CAREGGYCTNGVCFAHTYIYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagagggggggtattgtactaatggtgtatgcttcgctcacacctacatctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 393 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3545 3544 M02948:184:000000000-JK6TB:1:1115:4936:18545_1:N: productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 201 88.24 45/51 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [2.17.38.11] CATDPRADYYDSSGHRKWIDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagatccccgggccgattactatgatagtagtggtcatagaaagtggatcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3546 3545 M02948:184:000000000-JK6TB:1:1115:27199:19431_1:N productive Homsap IGHV4-34*03 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-13*01 F 2 8 7 17 8.7.17 [3.17.38.11] CARAVSTAAGTAGGWFDPW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcgagagcggtttcaacagcagctggtacggcgggaggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3547 3546 M02948:184:000000000-JK6TB:1:1115:15556:20296_1:N productive Homsap IGHV3-11*01 F 1088 98.65 220/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD4-17*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARCHGDLGYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgacctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgcgaagggccgattcaccatctccagggacaacgccaagaattcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagatgccacggcgacctagggtactactattattacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3548 3547 M02948:184:000000000-JK6TB:1:1115:14737:24154_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD4-23*01 ORF 3 8 8 10 8.8.10 [3.17.38.11] CATVVENWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgacggtggttgagaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3549 3548 M02948:184:000000000-JK6TB:1:1115:13270:24243_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ3*01 F (see comment) 133 74.00 37/50 nt Homsap IGHD2-15*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKSIGVVVVAATAGW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaaatctataggggtagtggtggtagctgctacagcgggctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3550 3549 M02948:184:000000000-JK6TB:1:1114:17288:2075_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARDPRGPLGGFYYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatccccgtggtcccttaggcggattttactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3551 3550 M02948:184:000000000-JK6TB:1:1114:15076:2304_1:N: productive Homsap IGHV3-48*03 F 861 96.72 177/183 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 X 8 13 X.8.13 [X.15.38.11] CARLGSGWCRPFDYW in-frame + tgggtccgccaggctccagggaaggggctggagtgggtctcagttattagtaggggtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagactgggcagtggctggtgtagaccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 286 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3552 3551 M02948:184:000000000-JK6TB:1:1114:10990:2592_1:N: productive Homsap IGHV1-8*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARVEQWPGREDFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtcgagcagtggccggggagggaggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3553 3552 M02948:184:000000000-JK6TB:1:1114:21251:2846_1:N: productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 987 94.52 207/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*02 F 1 8 8 12 8.8.12 [2.17.38.11] CARHLGLRLEIDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctgacactggcaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacacctgggattacgtttggagattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3554 3553 M02948:184:000000000-JK6TB:1:1114:17291:2988_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARRVCSGTSCSRGGTNWLDPW in-frame + aagggttctggatacagctttaccagctactggatcgcctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgattctgataccagatacagcccgtccttccaaggccaggtcaccatgtcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggcgagtttgtagtggtaccagctgctcacggggcggtaccaactggctcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgaaattcccctcgcgatat 0 0 376 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3555 3554 M02948:184:000000000-JK6TB:1:1114:10452:3766_1:N: productive Homsap IGHV3-7*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [3.17.38.11] CTRDYGDFGAPNADYW in-frame + tgcagcctctggattcacctttagtggatattggatgagttgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaaaatggaggtgagaaatactatgtggactctgtgaggggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtacgagagactacggtgacttcggagccccgaacgcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3556 3555 M02948:184:000000000-JK6TB:1:1114:23067:4300_1:N: productive Homsap IGHV3-30*03 F, or Homsap IGHV3-30*18 F or Homsap IGHV3-30-5*01 F 1088 98.65 220/223 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD7-27*01 F 3 8 8 17 8.8.17 [3.17.38.11] CAKDLANWETYYYYGMDVW in-frame + tgcagcctctggattcagcttcagtagccatgccatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgaaagatctagctaactgggaaacctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3557 3556 M02948:184:000000000-JK6TB:1:1114:8024:4736_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 192 86.27 44/51 nt Homsap IGHD2-2*02 F 2 8 8 17 8.8.17 [3.17.38.11] CARRPYCSGNSCYRCFETW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgcccatattgtagtggtaacagctgctataggtgttttgagacctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3558 3557 M02948:184:000000000-JK6TB:1:1114:23564:5365_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 960 93.15 204/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [2.17.38.11] CATEYVYYDSSGRGEAFDIW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagagtacgtttactatgatagtagtggccggggtgaggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3559 3558 M02948:184:000000000-JK6TB:1:1114:14926:5476_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD5-12*01 F 3 8 8 18 8.8.18 [2.17.38.11] CARGYSGYDDLQYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggttatagtggctacgacgaccttcagtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcaaggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3560 3559 M02948:184:000000000-JK6TB:1:1114:19175:5770_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1041 97.26 213/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD1-26*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARDRGKWELLTGRWFDPW in-frame + gcttctggaggcaccttcagcagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatagagggaagtgggagctacttaccggccgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3561 3560 M02948:184:000000000-JK6TB:1:1114:10528:5871_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 219 92.16 47/51 nt Homsap IGHD2-2*03 F 2 8 8 17 8.8.17 [3.17.38.11] CAKGGGCSSTSCQKWFESW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgcacagcctgagagccgaggacacggccgtatattactgtgcgaaaggtgggggttgtagtagtaccagctgccaaaagtggttcgagtcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3562 3561 M02948:184:000000000-JK6TB:1:1114:7860:5927_1:N:0 productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARELSSVWAFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtactaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacgtctgtttattactgtgcgagagagttaagcagtgtctgggcctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3563 3562 M02948:184:000000000-JK6TB:1:1114:6697:6055_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARGGTVGASPIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggggggacggtgggagctagtcccattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3564 3563 M02948:184:000000000-JK6TB:1:1114:4306:6301_1:N:0 productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-3*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARGRVEWSDHHYYMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctaagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccgggtggagtggtccgaccatcactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3565 3564 M02948:184:000000000-JK6TB:1:1114:13106:6319_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD3-9*01 F 3 8 8 19 8.8.19 [3.17.38.11] CARVYRSITILQAGYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagtctatcggagtattacgattttacaggcgggctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatttccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3566 3565 M02948:184:000000000-JK6TB:1:1114:22045:6368_1:N: productive Homsap IGHV3-30*03 F, or Homsap IGHV3-30*18 F or Homsap IGHV3-30-5*01 F or Homsap IGHV3-33*05 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-14*01 ORF 1 8 8 10 8.8.10 [3.17.38.11] CAGGGSTRGDYW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaacacactgtatctgcaaatgaacagtctgagaggcgaggacacggctgtatattactgtgcaggaggggggagcaccagaggtgattactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3567 3566 M02948:184:000000000-JK6TB:1:1114:25317:6427_1:N: productive Homsap IGHV4-61*01 F 1094 98.23 222/226 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD5-18*01 F 1 10 7 10 10.7.10 [3.17.38.11] CARITMVRGSYW in-frame + cactgtctctggtggctccgtcagcagtggtagttcctactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggctgtgtattactgtgcgagaattactatggttcggggcagctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3568 3567 M02948:184:000000000-JK6TB:1:1114:8972:6429_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD7-27*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARESELGWVDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagagtccgaactggggtgggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3569 3568 M02948:184:000000000-JK6TB:1:1114:2939:7487_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ6*01 F 166 74.19 46/62 nt Homsap IGHD3-10*01 F 1 8 7 12 8.7.12 [3.17.38.11] CAREFPGLNGIDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccaggtaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttccccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagagtttccggggttgaacggtatagacgtctggggacaagggaccacgatcaccgtcgcctcagggagtgcatccgcccaaacccttttccccctcgtcgcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3570 3569 M02948:184:000000000-JK6TB:1:1114:15948:8871_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 7 18 8.7.18 [3.17.38.11] CARRSYYYDSSGYYGGFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagacgcagctattactatgatagtagtggttattacgggggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3571 3570 M02948:184:000000000-JK6TB:1:1114:4129:9059_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F or Homsap IGHV4-59*12 (F) or Homsap IGHV4-59*13 F 1055 97.73 215/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-13*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARVRVASAGIDCW in-frame + cactgtctctggtggccccatcagtagttactactggagctggatccggcagccccctgggaagggactggagtggattgggtatgtctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaaactgagctctgtgaccgcagcggacacggccgtgtattactgtgcgagagtccgtgtagcatcagctggtattgactgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3572 3571 M02948:184:000000000-JK6TB:1:1114:8277:9651_1:N:0 productive Homsap IGHV3-23*03 F (see comment) 1028 96.36 212/220 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD3-10*02 F 1 8 7 14 8.7.14 [3.17.38.11] CAFQLSTDHYYYMDVW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (7 AA in M02948:184:000000000-JK6TB:1:1114:8277:9651_1:N:0; 8 AA in Homsap IGHV3-23*03): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagagcacgctgtatcttcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgttccaactcagcacggaccactactactacatggacgtctggggcaaagggaccacggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3573 3572 M02948:184:000000000-JK6TB:1:1114:10213:9916_1:N: unproductive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1130 95.90 234/244 nt Homsap IGHJ6*03 F 175 75.81 47/62 nt Homsap IGHD2-15*01 F 1 8 8 X 8.8.X [10.17.38.11] CARDLTDIVVVVAAT#MDVW out-of-frame + ggggtccctgagactctcctgtgcagcccctggattcaccttcagtagctatggcatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacatattaattatggtgggagtaccacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctatgtattactgtgcgagagacctaaccgatattgtagtggtggtagctgctactcatggacgtctggggcaaagggaccacggtcagcgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3574 3573 M02948:184:000000000-JK6TB:1:1114:9334:10113_1:N: productive Homsap IGHV3-11*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-10*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARDLSYSGSGTSAYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtaataccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtttattactgtgcgagagacttaagttactctggttcggggacttctgcgtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3575 3574 M02948:184:000000000-JK6TB:1:1114:5920:10912_1:N: No rearrangement found Homsap IGHV3-30*07 F 1070 97.76 218/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 292 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3576 3575 M02948:184:000000000-JK6TB:1:1114:4549:11755_1:N: productive Homsap IGHV1-8*02 F 1050 97.72 214/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD4-11*01 ORF 3 8 8 16 8.8.16 [2.17.38.11] CARVLSVTTYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttctatcagtaactacgtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3577 3576 M02948:184:000000000-JK6TB:1:1114:17381:11793_1:N productive Homsap IGHV4-61*01 F 1121 99.56 225/226 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt Homsap IGHD3-3*02 F 1 10 7 11 10.7.11 [3.17.38.11] CARVAELGYFDLW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggctgtgtattactgtgcaagagtagcggaattggggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3578 3577 M02948:184:000000000-JK6TB:1:1114:11818:12179_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1091 99.55 219/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-13*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARDPNRIRGAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaaaagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatcccaatagaatcaggggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3579 3578 M02948:184:000000000-JK6TB:1:1114:14795:12391_1:N productive (see comment) Homsap IGHV3-48*03 F 668 97.84 136/139 nt 97.12 135/139 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-25*01 F 2 8 X 13 8.X.13 [3.11.24.11] CAKDLAAATYYFDYW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 50 of V-REGION: 84 nucleotides (from position 68 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaagggagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatttggcagcggcaacctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 273 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3580 3579 M02948:184:000000000-JK6TB:1:1114:18289:12456_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD3-10*01 F 2 8 8 13 8.8.13 [2.17.38.11] CATGYGSGSYPKKFW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaggctatggttcggggagttatcctaaaaagttttggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3581 3580 M02948:184:000000000-JK6TB:1:1114:13514:12718_1:N No rearrangement found Homsap IGHV1-8*01 F 1059 98.17 215/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtggcacaaactatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaatggtggtagctgcctcgtctcctgtgagaattcccctcgcgatat 0 0 271 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3582 3581 M02948:184:000000000-JK6TB:1:1114:19800:12945_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARRPEHPYSSGWEFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgacccgagcacccttatagcagtggctgggagtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3583 3582 M02948:184:000000000-JK6TB:1:1114:28858:14950_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD3-9*01 F 2 8 7 12 8.7.12 [3.17.38.11] CASVSPDNYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagcgtgtcccccgataactacggtatggacgtctggggccaagggaccacggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3584 3583 M02948:184:000000000-JK6TB:1:1114:4829:15030_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-21*02 F 3 8 8 16 8.8.16 [3.17.38.11] CARVVVVTAIGYDAFDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgagcagcctgagagccgaggacacggctgtgtattactgtgcgagagttgtggtggtgactgctatcgggtatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaaccctttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3585 3584 M02948:184:000000000-JK6TB:1:1114:21712:17132_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [2.17.38.11] CATTPSGAYYYDSSGYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgctacgaccccatcaggggcgtattactatgatagtagtggttattactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3586 3585 M02948:184:000000000-JK6TB:1:1114:11618:17330_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ5*02 F 192 86.27 44/51 nt Homsap IGHD4-17*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDRVVYGDLNLNPHDLW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgacagccgaggacacggctgtgtattattgtgcgagagatcgggttgtctacggtgacctaaacctcaacccccacgacctctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3587 3586 M02948:184:000000000-JK6TB:1:1114:9033:17918_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ1*01 F (see comment) 134 73.08 38/52 nt Homsap IGHD2-21*02 F 3 8 8 8 8.8.8 [3.17.38.11] CASVVTAPVW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcttcggtggtgactgctccggtctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3588 3587 M02948:184:000000000-JK6TB:1:1114:13174:19150_1:N productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD4-23*01 ORF 2 8 8 18 8.8.18 [2.17.38.11] CARDLGDYGGSGQYYGMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggctgtgtattactgtgcgagagatctaggtgactacggtgggtcgggccagtactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3589 3588 M02948:184:000000000-JK6TB:1:1114:26949:19217_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD6-19*01 F 1 8 8 19 8.8.19 [3.17.38.11] CARISFSGWSGDEYYFGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaatctctttcagtggctggtctggcgacgagtactacttcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgcccaaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3590 3589 M02948:184:000000000-JK6TB:1:1114:24264:19371_1:N No rearrangement found Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagataaggtcgggtcccggcccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 292 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3591 3590 M02948:184:000000000-JK6TB:1:1114:17241:20195_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-3*01 F 3 8 8 9 8.8.9 [2.17.38.11] CAREDGAVGYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggacggagcggttggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3592 3591 M02948:184:000000000-JK6TB:1:1114:11604:20526_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 606 89.33 134/150 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 2 X 8 13 X.8.13 [X.4.38.11] CARCLDYGDYFFDYW in-frame + atatcgcgagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagatgtcttgactacggtgactacttttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 253 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3593 3592 M02948:184:000000000-JK6TB:1:1114:26563:21385_1:N productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1016 95.07 212/223 nt Homsap IGHJ1*01 F (see comment) 179 82.69 43/52 nt Homsap IGHD6-25*01 F 1 8 8 13 8.8.13 [3.17.38.11] CAKDLLAKGYGCEDW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttgagtagctactggatgtactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgacgggagtaccacaagctacgcggacttcgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatctattggctaagggttatggctgcgaggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3594 3593 M02948:184:000000000-JK6TB:1:1114:12069:22404_1:N productive Homsap IGHV1-2*04 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD6-13*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARTRGVAAAGRALRADAFDIW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaactcgaggagtggcagcagctggccgcgcgctccgggcggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3595 3594 M02948:184:000000000-JK6TB:1:1114:22181:22806_1:N productive Homsap IGHV1-18*01 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-17*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARADDDYGDYVENDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcggacgatgactacggtgactacgtggagaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3596 3595 M02948:184:000000000-JK6TB:1:1114:6581:22990_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 1 8 8 15 8.8.15 [3.17.38.11] CAREVGGLLWFGEFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagtaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggaagttggagggctactatggttcggggagtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3597 3596 M02948:184:000000000-JK6TB:1:1114:23200:24606_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 8 8 23 8.8.23 [2.17.38.11] CARDGAPYYYDSSGYYSGVYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgaggagcctgagatctgacgaaacggccgtgtattactgtgcgagagatggcgccccgtattactatgatagtagtggttattactccggggtctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3598 3597 M02948:184:000000000-JK6TB:1:1114:19261:24697_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-9*01 F 1 8 8 19 8.8.19 [2.17.38.11] CASGPLERYFDWSYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgtacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtggccccctcgagcgatattttgactggtcctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3599 3598 M02948:184:000000000-JK6TB:1:1114:11658:25042_1:N productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARNYYDTSGADYW in-frame + tgcagcctctggattcaccttcagtagctcctggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtatattactgtgcaagaaattactatgatactagtggggctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3600 3599 M02948:184:000000000-JK6TB:1:1113:22469:2217_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-12*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARQDSGYDSHFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaggatagtggctacgattcccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3601 3600 M02948:184:000000000-JK6TB:1:1113:20360:2377_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD3-22*01 F 2 8 8 25 8.8.25 [3.17.38.11] CARHSTYYYDSSGYQTNYYYYYYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacactcaacgtattactatgatagtagtggttaccagacgaattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 392 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3602 3601 M02948:184:000000000-JK6TB:1:1113:7772:7607_1:N:0 productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD1-26*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGSVGDSGSWTEW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactttttctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggggatccgtcggggacagtgggagctggacagaatggggccagggaacccaggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3603 3602 M02948:184:000000000-JK6TB:1:1113:17154:8310_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD2-21*01 F 3 8 8 9 8.8.9 [3.17.38.11] CATGVVPQSYW in-frame + tacagcctctggattcacctttagcacctatgccctgagctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagcgctagtgatggtagcagatactacgcggactccgtgaagggccggttcaccatttccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatatttctgtgcgactggggtggtcccccagtcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3604 3603 M02948:184:000000000-JK6TB:1:1113:15819:8615_1:N: unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-22*01 F 3 8 8 X 8.8.X [2.17.38.11] CARDPLS***WLS#NWFDPW out-of-frame + rearranged sequence, stop codons gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatccactatcatgatagtagtggttatcacaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3605 3604 M02948:184:000000000-JK6TB:1:1113:12014:8870_1:N: productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CAKDKQYSGSASGAFDIW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagacaaacagtatagtgggagcgcatcgggtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3606 3605 M02948:184:000000000-JK6TB:1:1113:13896:8945_1:N: productive Homsap IGHV3-30*07 F, or Homsap IGHV3-30*12 F 989 93.72 209/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKCTGQAAARSLFDYW in-frame + tgcagcctctggattcacctttagcaaccattggatgagttgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccggttcaccatccccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatgtaccgggcaagcagcagctcgatcgctttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3607 3606 M02948:184:000000000-JK6TB:1:1113:13847:8956_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-1*01 F 1 8 8 9 8.8.9 [3.17.38.11] CARRKRGFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgaaagaggggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3608 3607 M02948:184:000000000-JK6TB:1:1113:4242:9144_1:N:0 productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARDVSGGYALFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagagatgtttcgggcggctacgccctatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3609 3608 M02948:184:000000000-JK6TB:1:1113:11198:9622_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ1*01 F 242 96.15 50/52 nt Homsap IGHD1-1*01 F 3 8 8 12 8.8.12 [3.17.38.11] CAKDLDWIEYFQHW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagacctcgactggattgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3610 3609 M02948:184:000000000-JK6TB:1:1113:25106:10082_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-21*02 F 3 8 8 12 8.8.12 [3.17.38.11] CARDRGVVTAIDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatcggggggtggtgactgccattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3611 3610 M02948:184:000000000-JK6TB:1:1113:9914:11540_1:N: productive (see comment) Homsap IGHV3-11*06 F 876 96.77 180/186 nt 96.24 179/186 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD6-13*01 F 1 X 7 13 X.7.13 [X.17.38.11] CARGRYSSSWRFDPW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 57 of V-REGION: 3 nucleotides (from position 55 in the user submitted sequence), (do not cause frameshift) atgagctgggtccgccaggctccagggcaggggctggagtgggtttcatacattagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggaaggtatagcagcagctggcggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 289 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3612 3611 M02948:184:000000000-JK6TB:1:1113:12188:13907_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD3-10*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARPSGGYGENWYFDLW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaccctcggggggctacggcgaaaactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3613 3612 M02948:184:000000000-JK6TB:1:1113:10353:14320_1:N productive Homsap IGHV4-34*03 F 1077 99.09 217/219 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD2-2*03 F 2 8 7 24 8.7.24 [3.17.38.11] CARVGGYCSSTSCRNNYYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattgctgtgcgagagttggtgggtattgtagtagtaccagctgccgcaataattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3614 3613 M02948:184:000000000-JK6TB:1:1113:5116:14501_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ2*01 F 211 88.68 47/53 nt Homsap IGHD2-2*03 F 2 8 8 10 8.8.10 [3.17.38.11] CAGERRGYFDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagagaatgccaagaactccttttatcttcaaatgaacagcctgagagccggggacacggctgtctattactgtgctggagagagaagggggtacttcgatgtctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3615 3614 M02948:184:000000000-JK6TB:1:1113:16831:15064_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD4-17*01 F 3 8 7 12 8.7.12 [3.17.38.11] CARESVTYNCFDPW in-frame + cactgtctctggtggctccatcagtatttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggctgtgtattactgtgcgagagaatcggtgacgtacaactgcttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3616 3615 M02948:184:000000000-JK6TB:1:1113:20898:15067_1:N productive Homsap IGHV3-7*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [3.17.38.11] CAKGLMGAQYYFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagggagatggaggtgagaaatattatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaattcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggtctgatgggagcccagtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3617 3616 M02948:184:000000000-JK6TB:1:1113:20641:16460_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-21*01 F 3 8 8 9 8.8.9 [2.17.38.11] CASVVGIDDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtgtggtgggcatagacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3618 3617 M02948:184:000000000-JK6TB:1:1113:13653:17240_1:N unproductive (see comment) Homsap IGHV2-5*02 F 1002 89.16 222/249 nt Homsap IGHJ3*02 F (see comment) 23 70.00 7/10 nt 10 7 X 10.7.X [11.17.38.X] + rearranged sequence, stop codons, no junction found the JUNCTION has not been identified: the results for J-GENE may be unreliable acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 258 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3619 3618 M02948:184:000000000-JK6TB:1:1113:14765:17287_1:N productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD6-19*01 F 2 8 8 14 8.8.14 [2.17.38.11] CAKLADYYYYYYMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtatattactgtgcgaaattggctgactactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3620 3619 M02948:184:000000000-JK6TB:1:1113:20168:18843_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD3-22*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARELSHYYDSSGYRFDPW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagagctcagccattactatgatagtagtggttataggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3621 3620 M02948:184:000000000-JK6TB:1:1113:20934:19007_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD3-10*01 F 3 8 7 17 8.7.17 [3.17.38.11] CARARITMVRPNYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcccgtattactatggttcggccaaactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3622 3621 M02948:184:000000000-JK6TB:1:1113:13894:19171_1:N productive Homsap IGHV4-34*09 F 1073 98.64 217/220 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD3-16*01 F 3 8 7 14 8.7.14 [3.17.38.11] CARQFGDRPHYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcacctactacaacccgtccctcaagagtctagttaccatatcagtagacacgtctaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcgagacagtttggggacagaccacactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3623 3622 M02948:184:000000000-JK6TB:1:1113:15838:21035_1:N productive Homsap IGHV4-61*01 F 1121 99.56 225/226 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-6*01 F 1 10 7 12 10.7.12 [3.17.38.11] CARDLSSSYYFDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattatagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatttgtcgtcctcctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3624 3623 M02948:184:000000000-JK6TB:1:1113:16438:21382_1:N productive Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CAREPCSGGSCWFDPW in-frame + tgcagcctctggattcaccttcggtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtggtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagaaccttgtagtggtggtagctgctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3625 3624 M02948:184:000000000-JK6TB:1:1113:20583:21725_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1055 97.73 215/220 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 237 96.08 49/51 nt Homsap IGHD6-19*01 F 3 8 7 14 8.7.14 [3.17.38.11] CASLPRLVGYNWFDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagcctcccgaggctggtagggtacaactggttcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3626 3625 M02948:184:000000000-JK6TB:1:1113:10824:22469_1:N productive Homsap IGHV3-48*03 F 911 99.46 183/184 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 3 X 8 25 X.8.25 [X.15.38.11] CARDQAVVVPAAKSNWLYYYYYGMDVW in-frame + ctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgagcagcctgagagccgaggacacggctgtttattactgtgcgagagatcaggctgtagtagtaccagctgccaaaagcaattggctttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 323 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3627 3626 M02948:184:000000000-JK6TB:1:1113:22554:24625_1:N unproductive (see comment) Homsap IGHV2-5*02 F 948 86.75 216/249 nt Homsap IGHJ3*02 F (see comment) 23 70.00 7/10 nt 10 7 X 10.7.X [11.17.38.X] + rearranged sequence, stop codons, no junction found the JUNCTION has not been identified: the results for J-GENE may be unreliable acacagaccctcacgctgacctgcaccttctctgggttctcattcaccactactggagtgggtgtggcctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgatacgcgctacagcccatctctgaagaacaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 258 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3628 3627 M02948:184:000000000-JK6TB:1:1113:8767:24672_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD4-17*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARDVHGDYTLDAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgtgcacggtgactacaccctagatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3629 3628 M02948:184:000000000-JK6TB:1:1112:9983:2173_1:N:0 productive Homsap IGHV4-38-2*01 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 9 7 15 9.7.15 [3.17.38.11] CARGRGDYGDYYRFDYW in-frame + other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagagtcagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgaggtgactacggtgactactatcgctttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3630 3629 M02948:184:000000000-JK6TB:1:1112:8245:2246_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-2*02 F 3 8 8 16 8.8.16 [2.17.38.11] CARGAAAINDYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtgcagctgctataaacgactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3631 3630 M02948:184:000000000-JK6TB:1:1112:24734:3086_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 971 92.83 207/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 3 8 8 7 8.8.7 [3.17.38.11] CARRGFDYW in-frame + tgcagcctctggattcacctttagcagctctgccatgaactgggtccggcaggctccagggatggggctggagtgggtctcagttattactgccagtggtgatttcacaaactacgcagactccgtgaagggccggttcaccatctccagagacaattccaggaacacactgtatctgcaaatgagcagccttagagccgaggacacggccgtatattactgtgcgagaaggggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3632 3631 M02948:184:000000000-JK6TB:1:1112:20311:3652_1:N: No rearrangement found Homsap IGHV7-4-1*01 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggatacaccttcactagctatgctatgaattgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaacaccaacactgggaacccaacgtatgcccagggcttcacaggacggtttgtcttctccttggacacctctgtcagcacggcatatctgcagatctgcagcctaaaggctgaggacactgccgtgtattactgtgcgagagagagaggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 292 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3633 3632 M02948:184:000000000-JK6TB:1:1112:7105:5303_1:N:0 productive Homsap IGHV4-59*12 (F) 1100 100.00 220/220 nt Homsap IGHJ3*01 F (see comment) 160 80.00 40/50 nt Homsap IGHD6-13*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARDGAIATAALVLDVW in-frame + other possibilities: Homsap IGHJ6*02 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagatggagctatagcaacagccgcccttgttctggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3634 3633 M02948:184:000000000-JK6TB:1:1112:7653:5632_1:N:0 productive Homsap IGHV4-4*07 F 1091 99.55 219/220 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 2 8 7 20 8.7.20 [3.17.38.11] CARDRRTISYGWGYYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccgccgggaagggactggagtggattgggcgtatctataccagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatgtcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagataggagaaccatcagctatggttggggttactactactacggtatggacgtctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3635 3634 M02948:184:000000000-JK6TB:1:1112:25974:5752_1:N: productive Homsap IGHV3-30*03 F, or Homsap IGHV3-30*18 F or Homsap IGHV3-30-5*01 F 890 88.79 198/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD5-12*01 F 3 8 8 22 8.8.22 [3.17.38.11] CARGPRGDRGYPTPGYYYYGMDVW in-frame + tgcagcctctggattcaccttcgacaactttgccatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttgtctcatttgatgggagtaatacatggtatgaagactccgtgaggggccgactcaccatctccagagacaactccaagaacatgctatatctgcaaatgaacaggctgcgagttgtggacacggctatatattactgtgcgagagggccacgtggtgatcgtggatacccaactccgggctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3636 3635 M02948:184:000000000-JK6TB:1:1112:4340:6460_1:N:0 productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-25*01 F 2 8 8 21 8.8.21 [3.17.38.11] CAHLPGIAALGKVWDYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgcacctcccgggtatagcagcgttgggcaaggtctgggactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3637 3636 M02948:184:000000000-JK6TB:1:1112:3882:7038_1:N:0 productive Homsap IGHV4-4*02 F, or Homsap IGHV4-4*03 (F) 1115 100.00 223/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-12*01 F 3 9 7 17 9.7.17 [3.17.38.11] CARVLYSGYGVSGAAFDIW in-frame + cgctgtctctggtggctccatcagcagtagtaactggtggagttgggtccgccagcccccagggaaggggctggagtggattggggaaatctatcatagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacaagtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagtcttgtatagtggctacggcgtctcaggggctgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3638 3637 M02948:184:000000000-JK6TB:1:1112:8177:8864_1:N:0 productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-3*01 F 3 8 8 15 8.8.15 [2.17.38.11] CARRSVEWGVVNGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacgtagcgtggagtggggagtggttaacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3639 3638 M02948:184:000000000-JK6TB:1:1112:20262:9986_1:N: productive Homsap IGHV1-18*01 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARSVGATTVVDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatcggtgggagctactacggtggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3640 3639 M02948:184:000000000-JK6TB:1:1112:5935:10376_1:N: productive Homsap IGHV2-5*02 F 1245 100.00 249/249 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-23*01 ORF 1 10 7 20 10.7.20 [11.17.38.11] CAHRRKLPSTRKGGYYYYMDVW in-frame + acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacagacgcaaactcccgtcgacacggaaagggggctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 404 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3641 3640 M02948:184:000000000-JK6TB:1:1112:26878:11225_1:N productive Homsap IGHV1-2*04 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARESSYSSGSWDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagaaagttcctatagcagtggctcttgggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3642 3641 M02948:184:000000000-JK6TB:1:1112:5769:11468_1:N: productive Homsap IGHV3-30*01 F 1052 96.86 216/223 nt Homsap IGHJ6*02 F 202 80.65 50/62 nt Homsap IGHD6-25*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARDKAAATYGMDVW in-frame + tgcagcctctggattcgccttcagtacctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcacttatattatatgatggaaataataaatactacggagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtatattactgtgcgagagataaagctgctgcaacctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3643 3642 M02948:184:000000000-JK6TB:1:1112:19244:11766_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1034 95.96 214/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 3 8 8 7 8.8.7 [3.17.38.11] CARRGFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggaatgggtctcaggtattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagtcgaggacacggccgtatattactgtgcgagaaggggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3644 3643 M02948:184:000000000-JK6TB:1:1112:11931:11871_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD1-14*01 ORF 3 8 7 13 8.7.13 [3.17.38.11] CARGVNRKVYGMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggggtcaaccgaaaagtctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3645 3644 M02948:184:000000000-JK6TB:1:1112:17081:12606_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD3-16*01 F 3 8 8 15 8.8.15 [3.17.38.11] CAREGGGAGYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagaaggggggggagcaggatactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3646 3645 M02948:184:000000000-JK6TB:1:1112:15966:12716_1:N productive Homsap IGHV3-48*03 F 989 93.72 209/223 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD3-22*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARGDTLIVDLYWYFDLW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtggttttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctctttattactgtgcgagaggggataccctgatagtagacctctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3647 3646 M02948:184:000000000-JK6TB:1:1112:20356:13107_1:N productive Homsap IGHV3-30*04 F, or Homsap IGHV3-30-3*03 F or Homsap IGHV3-33*03 F or Homsap IGHV3-33*08 F 1025 95.52 213/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-3*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARASPYDFWSGYSRYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagacctgaggacacggccgtgtattactgtgcgagagcttccccctacgatttttggagtggttactcccgctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3648 3647 M02948:184:000000000-JK6TB:1:1112:25590:13203_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARSGVVVVASVDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagtggggtagtagtggttgctagcgtggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccacaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3649 3648 M02948:184:000000000-JK6TB:1:1112:16675:13304_1:N productive Homsap IGHV3-21*04 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARDRGGGYCSSTSCYPYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatcggggggggggatattgtagtagtaccagctgctatccctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3650 3649 M02948:184:000000000-JK6TB:1:1112:15087:13675_1:N unproductive Homsap IGHV3-43D*04 F 1106 99.55 222/223 nt Homsap IGHJ6*04 F (see comment) 144 69.84 44/63 nt Homsap IGHD1-26*01 F 2 8 8 X 8.8.X [3.17.38.11] CAKDISRTYYYY#DVW out-of-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtctctcttattagttgggatggtggtagcacatactatgcagactctgtgaagggtcgattcaccatctccagagacaacagcaaaaactccctgtatctgcaaatgaccagtctgagagctgaggacaccgccttgtattactgtgcaaaagatattagcaggacctactactactacatgacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3651 3650 M02948:184:000000000-JK6TB:1:1112:12864:14478_1:N productive (see comment) Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 661 99.25 133/134 nt 98.51 132/134 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD2-2*01 F 2 8 X 20 8.X.20 [3.2.31.11] CARLLSYCSSTSCRIRYGMDVW in-frame + potentially, because of detected insertion/deletion in FR2-IMGT, from codon 41 of V-REGION: 88 nucleotides (from position 42 in the user submitted sequence), (cause frameshift) aagggttctggaaacagctttaccagctactggatcagctgggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcctctcatattgtagtagtaccagctgccgaatccgctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 289 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3652 3651 M02948:184:000000000-JK6TB:1:1112:13765:15112_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*02 F 2 8 8 12 8.8.12 [3.17.38.11] CARDTRGGLALDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtggtagtggtggtcgcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctttatctgcaagtgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatactcggggtggtctcgccctggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3653 3652 M02948:184:000000000-JK6TB:1:1112:18223:15461_1:N productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARFQGVLLHDYFDYW in-frame + gcttctggttacacctttaccagcaatggtatcagctgggtgcgacaggcccctgggcaagggcttgagtggatggggtggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgaggttccagggagtattactacacgactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3654 3653 M02948:184:000000000-JK6TB:1:1112:7385:15988_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1077 99.09 217/219 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-15*01 F 2 8 8 24 8.8.24 [2.17.38.11] CASEVYCSGGSCYSPKPDYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaagccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtctattactgtgcgagtgaggtatattgtagtggtggtagttgctattctcctaaacccgactactattattacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3655 3654 M02948:184:000000000-JK6TB:1:1112:3808:16613_1:N: productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD3-10*01 F 2 9 7 17 9.7.17 [3.17.38.11] CARDRKIQYYGSGGWFDPR in-frame + TRP 118 not identified cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagatcgaaaaattcaatactatggttcggggggctggttcgaccccaggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3656 3655 M02948:184:000000000-JK6TB:1:1112:22062:19716_1:N productive Homsap IGHV3-48*04 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 3 8 8 11 8.8.11 [3.17.38.11] CASRKVPQWLDYW in-frame + tgcagcctctggattcaccttcagtagctatagtatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagcagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagcagaaaggtcccgcagtggctcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3657 3656 M02948:184:000000000-JK6TB:1:1112:26390:19889_1:N productive Homsap IGHV3-7*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARDRGGNSFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactagatctgcaaatgaacagcctgagagccgaggacacggctatgtattactgtgcgagagatcgtggtggtaactcctttgactactggggccagggaaccctgatcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3658 3657 M02948:184:000000000-JK6TB:1:1112:19827:21289_1:N productive Homsap IGHV1-2*04 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-3*02 F 3 8 8 12 8.8.12 [2.17.38.11] CARGLSFGDSFDYW in-frame + gcttctggttacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggcctcagtttcggtgactcatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3659 3658 M02948:184:000000000-JK6TB:1:1112:20680:21624_1:N productive Homsap IGHV3-72*01 F 1145 100.00 229/229 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-22*01 F 2 8 10 18 8.10.18 [3.17.38.11] CARFSYYYDSSGYYYVEDYW in-frame + tgcagcctctggattcaccttcagtgaccactacatggactgggtccgccaggctccagggaaggggctggagtgggttggccgtactagaaacaaagctaacagttacaccacagaatacgccgcgtctgtgaaaggcagattcaccatctcaagagatgattcaaagaactcactgtatctgcaaatgaacagcctgaaaaccgaggacacggccgtgtattactgtgctagattttcgtattactatgatagtagtggttattactacgtcgaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3660 3659 M02948:184:000000000-JK6TB:1:1112:15201:23368_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 201 88.24 45/51 nt Homsap IGHD3-3*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARHRYTIFGVVQFDPW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacataggtatacgatttttggagtggtccagttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 361 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3661 3660 M02948:184:000000000-JK6TB:1:1111:15690:2589_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-2*02 F 3 8 7 21 8.7.21 [3.17.38.11] CARGYVVVPAAIFSYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggtatgtagtagtaccagctgctatattcagctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagttcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3662 3661 M02948:184:000000000-JK6TB:1:1111:5746:3856_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-13*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARGGGSSWYGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtggaggcagcagctggtacggctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3663 3662 M02948:184:000000000-JK6TB:1:1111:23528:3905_1:N: productive Homsap IGHV4-38-2*01 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD4-17*01 F 2 9 7 18 9.7.18 [3.17.38.11] CATGGGHGDYDYYYYYMDVW in-frame + cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccccgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgacgggggggggccacggtgactacgactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3664 3663 M02948:184:000000000-JK6TB:1:1111:23055:3939_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 229 85.48 53/62 nt Homsap IGHD2-8*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARCPRSTKGYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagatgtccccggtcaactaagggctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3665 3664 M02948:184:000000000-JK6TB:1:1111:22164:3965_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARKIYDSSGYVDWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggaagatctatgatagtagtggttatgtcgactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3666 3665 M02948:184:000000000-JK6TB:1:1111:8620:4377_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1016 95.07 212/223 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD1-26*01 F 2 8 8 21 8.8.21 [3.17.38.11] CANMGRWDRNSGFYYYYYGMDVW in-frame + tgcagcctctagattcagctttagcagctatgccatgagctgggtccgccagactccagggaaggggctggaatgggtctcaggtattagtgctggtggtggtagcacattctacgcagactccgtgaagggccggctcaccatctccagagacaattccgagaacacgctgtatctgcaaatgaacagcctgagagtcgaggacacggccgtatattactgtgcgaatatgggaaggtgggatcgaaattcgggattttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3667 3666 M02948:184:000000000-JK6TB:1:1111:27516:5987_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1014 95.89 210/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD4-23*01 ORF 3 8 8 13 8.8.13 [2.17.38.11] CARDSPVVGDAFDIW in-frame + gcttctggatacaccttaaccaattatgatctcaactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagactccccggtcgtcggggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3668 3667 M02948:184:000000000-JK6TB:1:1111:20444:7365_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-20*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARAERYNWNDGDTDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagccgagcggtataactggaacgacggagacactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3669 3668 M02948:184:000000000-JK6TB:1:1111:28778:11504_1:N unproductive (see comment) Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-19*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARSLYSSGWTSYWFDPW in-frame + rearranged sequence, stop codons gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgtgagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatctctgtatagcagtggctggacatcctactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3670 3669 M02948:184:000000000-JK6TB:1:1111:22544:11631_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARGLVPAAITLGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtttagtaccagctgctatcacgcttgggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3671 3670 M02948:184:000000000-JK6TB:1:1111:19196:12389_1:N productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F or Homsap IGHV1-69*01 F or Homsap IGHV1-69*11 F or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69*15 F or Homsap IGHV1-69*18 (F) or Homsap IGHV1-69D*01 F 942 92.24 202/219 nt Homsap IGHJ4*02 F, or Homsap IGHJ4*03 F (see comment) 168 83.33 40/48 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARDPPAPEHGDYVYW in-frame + other possibilities: Homsap IGHJ1*01 (highest number of consecutive identical nucleotides) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtctattactgtgcgagagatcccccggcccctgagcacggtgattatgtgtactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3672 3671 M02948:184:000000000-JK6TB:1:1111:15418:12426_1:N productive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 995 95.39 207/217 nt 94.93 206/217 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 6 13 8.6.13 [3.17.38.11] CARYRSGNYYGVDYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 57 of V-REGION: 6 nucleotides (from position 89 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcacctttagcagctatgccatgagctggttccgccaggctccagggaaggggctggagtgggtctcgactattaatagtggtaacacatactacgcagactccgtgaggggccggttcaccatctccagagacaattccaagaacacgttgtttctgcaaatgaacagcctgagagccgaggacacggccgtacattactgtgcgagatatcgtagtggtaactactacggagttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3673 3672 M02948:184:000000000-JK6TB:1:1111:14952:12492_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-26*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARPNSGSYYGVMIDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacccaatagtgggagctactacggggtaatgattgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3674 3673 M02948:184:000000000-JK6TB:1:1111:1880:12862_1:N: productive Homsap IGHV3-15*01 F, or Homsap IGHV3-15*02 F 1225 98.03 249/254 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD3-10*01 F 2 8 10 14 8.10.14 [11.17.38.11] CTTVIYGSGSYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) cttgggggacccagagactctcctgtgcagcctctggattcactttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaaactgatggtgggacaacagactacgctgcatccgtgaaaggcagattcaccatctcaagagatgattcaaaaaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtaccacagtcatctatggttcggggagttactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3675 3674 M02948:184:000000000-JK6TB:1:1111:22999:13256_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD2-2*02 F 2 8 7 23 8.7.23 [3.17.38.11] CARGPGCSSTSCYIDRPSYWYFDLW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggcccgggttgtagtagtaccagctgctatatcgatcgtccctcatactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3676 3675 M02948:184:000000000-JK6TB:1:1111:8930:13297_1:N: productive (see comment) Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt 8 8 9 8.8.9 [3.17.38.11] CARFGAAFTFG (see V-DOMAIN Functionality comment) in-frame + IMGT/JunctionAnalysis gives no results for this JUNCTION; TRP 118 not identified tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagatttggggctgcctttacgtttggtcgccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3677 3676 M02948:184:000000000-JK6TB:1:1111:9446:13734_1:N: productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD1-14*01 ORF 3 10 7 14 10.7.14 [3.17.38.11] CARVNGQDYYYYMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagttaacgggcaggactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcaggtcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3678 3677 M02948:184:000000000-JK6TB:1:1111:2837:14321_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1079 98.21 219/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 3 8 8 16 8.8.16 [3.17.38.11] CAREAVVVAATQDAFDIW in-frame + tgcagcctctggattcaccttcagtagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaagcagtggtggtagctgctactcaggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3679 3678 M02948:184:000000000-JK6TB:1:1111:11025:14435_1:N productive Homsap IGHV3-7*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-3*01 F 2 8 8 10 8.8.10 [3.17.38.11] CARWSGYYYDSW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagatggagtggttattattacgatagttggggccagggaaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3680 3679 M02948:184:000000000-JK6TB:1:1111:8450:15216_1:N: productive Homsap IGHV3-48*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARDRDSSGWARGDPDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggccgtgtattactgtgcgagagatcgggatagcagtggctgggcacggggggatcctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3681 3680 M02948:184:000000000-JK6TB:1:1111:11032:15485_1:N No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 971 92.83 207/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found, stop codons tgcagcctctggattcacctttgatgattatggcatgagctgggtccgccaagctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccgagaacacgctgtgactgcaaatgaacagcctgagagccgagggcacggccgtttcctactggggccagggagccctggtcaccgtcttcttaaggagtgcattcgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 315 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3682 3681 M02948:184:000000000-JK6TB:1:1111:13219:15994_1:N productive Homsap IGHV5-51*01 F 1208 98.79 244/247 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 1 8 8 15 8.8.15 [11.17.38.11] CARHSVWFGELLPFDYW in-frame + cggtgagtctctgcagatctactgtaagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacattcagtatggttcggggagttattaccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3683 3682 M02948:184:000000000-JK6TB:1:1111:12551:16179_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARGVLGQLLPFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggggtcctgggccagctgctcccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3684 3683 M02948:184:000000000-JK6TB:1:1111:15351:16615_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-2*01 F 3 8 8 18 8.8.18 [2.17.38.11] CAREGRESTEVVPAAIEDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaagggcgagaatcgaccgaagtagtaccagctgctatcgaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcatctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3685 3684 M02948:184:000000000-JK6TB:1:1111:19497:17617_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD2-2*01 F 2 10 7 22 10.7.22 [3.17.38.11] CARVDRIYCSSTSCPGYYYYMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtagaccgcatctattgtagtagtaccagctgccccgggtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3686 3685 M02948:184:000000000-JK6TB:1:1111:8773:18107_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 9 8.8.9 [2.17.38.11] CARDSGEFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggtcaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagacagtggggaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3687 3686 M02948:184:000000000-JK6TB:1:1111:12283:18918_1:N No rearrangement found Homsap IGHV3-7*01 F 1115 100.00 223/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagccgggagtagtgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 303 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3688 3687 M02948:184:000000000-JK6TB:1:1111:12868:19152_1:N productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F (see comment) 166 74.19 46/62 nt Homsap IGHD2-21*01 F 3 8 8 13 8.8.13 [3.17.38.11] CASFGVVVIAYMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagtttcggtgtggtggtgattgcatacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3689 3688 M02948:184:000000000-JK6TB:1:1111:17357:20155_1:N productive Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 3 8 8 7 8.8.7 [3.17.38.11] CARRGFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggaatgggcttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaaggggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3690 3689 M02948:184:000000000-JK6TB:1:1111:4037:20193_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARGTTLGYCSSTSCYGVDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggcaccaccctaggatattgtagtagtaccagctgctacggtgtggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3691 3690 M02948:184:000000000-JK6TB:1:1111:9034:21100_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1023 96.35 211/219 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-22*01 F 2 8 8 19 8.8.19 [2.17.38.11] CARGDYYDSSGYYEQNWFDPW in-frame + gcttctggttacacctttaccacctatggtatcagctgggtacgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgattactatgatagtagtggttattatgagcagaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3692 3691 M02948:184:000000000-JK6TB:1:1111:26613:21230_1:N productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ6*02 F 233 86.89 53/61 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARDLGDYHGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatctcggtgactaccacggtatggacgtctggggccaagggaccacggtcaccgtctccgcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatctccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3693 3692 M02948:184:000000000-JK6TB:1:1111:19631:21529_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1082 99.09 218/220 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD7-27*01 F 1 8 7 11 8.7.11 [3.17.38.11] CARDLYEDEGESW in-frame + cactgtctctggtggctccatcagtagttactactggaactggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtctccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatctatatgaggatgagggagaaagctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3694 3693 M02948:184:000000000-JK6TB:1:1111:26046:21612_1:N productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD5-18*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARDPGTAMVNW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaccccgggacagctatggttaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3695 3694 M02948:184:000000000-JK6TB:1:1111:21361:22935_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-24*01 ORF 1 8 8 19 8.8.19 [2.17.38.11] CARVQARKYPKEMATTHNDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagtccaggcccgcaaataccccaaagagatggctacaacccacaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3696 3695 M02948:184:000000000-JK6TB:1:1111:8047:23259_1:N: unproductive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD1-1*01 F 3 8 8 X 8.8.X [2.17.38.11] CARDGTRGRL#FDPW out-of-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatggtacgagagggagactaggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 352 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3697 3696 M02948:184:000000000-JK6TB:1:1111:19380:23848_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 1 8 7 12 8.7.12 [3.17.38.11] CARVHSSGGYIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagttcatagcagtggcggctatattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3698 3697 M02948:184:000000000-JK6TB:1:1111:9213:25172_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD5-18*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARDRGYSYGKTKNYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatcgtggatacagctatggtaaaacaaaaaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3699 3698 M02948:184:000000000-JK6TB:1:1110:7332:3913_1:N:0 productive Homsap IGHV3-48*03 F 971 92.83 207/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CVASLSGWYNDGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtctatcactgtgttgctagtctcagtggctggtacaacgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3700 3699 M02948:184:000000000-JK6TB:1:1110:7167:4566_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 1046 97.27 214/220 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD3-10*01 F 2 8 7 19 8.7.19 [3.17.38.11] CARDVRGEDHYGYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatgttcgaggggaggatcactacggttattactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3701 3700 M02948:184:000000000-JK6TB:1:1110:16094:4647_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD3-10*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARRSQGRAFDIW in-frame + aagggttctggatacagctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgttcccagggccgcgcttttgatatttggggccaagggacaatggtcagcgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3702 3701 M02948:184:000000000-JK6TB:1:1110:8038:6610_1:N:0 productive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1001 95.00 209/220 nt 94.55 208/220 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-11*01 ORF 3 8 7 19 8.7.19 [3.17.38.11] CAKRSTISTSVTPVMFYFDDW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 57 of V-REGION: 3 nucleotides (from position 89 in the user submitted sequence), (do not cause frameshift) tgcagcctctgggttcacctttagcaactatgccatgagttgggtccgccagactccagggaaggggctggagtgggtctcatctattactactgatggtagcacatactacgcagactccgtgaagggccggttcaccctctccagagacaattccaagaacacgctgtatctacaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaggtctacaataagtacgtctgttacccctgtgatgttctactttgacgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3703 3702 M02948:184:000000000-JK6TB:1:1110:23825:6924_1:N: productive Homsap IGHV3-30*12 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDRGGFGVVIQIDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaatacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcgagagatcgtgggggctttggagtggttatccagattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3704 3703 M02948:184:000000000-JK6TB:1:1110:6886:8103_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-22*01 F 3 8 8 21 8.8.21 [2.17.38.11] CARGLAITMIVVVSAGTYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggactcgcaattactatgatagtagtggtttccgctgggacttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3705 3704 M02948:184:000000000-JK6TB:1:1110:27048:8470_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD3-10*01 F 3 8 8 9 8.8.9 [3.17.38.11] CASLVRGVPSW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagcttggttcggggagttccgtcgtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3706 3705 M02948:184:000000000-JK6TB:1:1110:25765:8947_1:N: productive Homsap IGHV1-18*01 F, or Homsap IGHV1-18*04 F 720 100.00 144/144 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD3-10*01 F 3 X 8 17 X.8.17 [X.2.38.11] CARAPNPMVRGVKNWFDPW in-frame + ggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcccccaatcctatggttcggggagtgaagaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 259 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3707 3706 M02948:184:000000000-JK6TB:1:1110:24528:9754_1:N: unproductive Homsap IGHV3-48*03 F 849 88.73 189/213 nt 87.79 187/213 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD6-13*01 F 2 8 5 X 8.5.X [3.17.37.11] CAKGPSLVLQHL#YNWFDPW out-of-frame + in CDR2-IMGT, from codon 57 of V-REGION: 9 nucleotides (from position 89 in the user submitted sequence), (do not cause frameshift)in FR3-IMGT, from codon 95 of V-REGION: 1 nucleotides (from position 186 in the user submitted sequence), (cause frameshift) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagagaaggggctggagtgggtctcagacattactattacgacacactacgcagactccgtgaagggccggttcaccgtccccagagacatctccaagaacatactgtatctgcaaatgaggagcctgaaaccgaggacgcggccgtatattattgtgcgaaaggtccgtccctcgtgttgcagcacctgggtacaactggttcgacccctggggccagggaacgctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 361 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3708 3707 M02948:184:000000000-JK6TB:1:1110:20253:10850_1:N productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F (see comment) 143 75.00 39/52 nt Homsap IGHD6-19*01 F 2 8 8 14 8.8.14 [2.17.38.11] CARGIPPGIAVAGDRW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagaggtattccaccgggtatagcagtggctggggatcgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3709 3708 M02948:184:000000000-JK6TB:1:1110:3734:11809_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD3-3*02 F 2 8 8 16 8.8.16 [2.17.38.11] CARVPLDKYSYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggttccccttgataagtattcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3710 3709 M02948:184:000000000-JK6TB:1:1110:7480:12116_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*03 F 159 81.25 39/48 nt Homsap IGHD2-15*01 F 2 8 8 15 8.8.15 [2.17.38.11] CAGGRGECSGGSCYPVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgggtgggcggggggaatgtagtggtggtagctgctaccccgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3711 3710 M02948:184:000000000-JK6TB:1:1110:23965:12165_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1158 98.73 234/237 nt Homsap IGHJ5*02 F (see comment) 165 80.39 41/51 nt Homsap IGHD2-2*01 F 2 8 8 12 8.8.12 [8.17.38.11] CARAGSSSSCPSRW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gtgaaggtctccttcacggcttctggaggcaccttcagcagctatgctatcagctgggtgcgaccggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagctggcagtagtagcagttgccctagccgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 337 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3712 3711 M02948:184:000000000-JK6TB:1:1110:3317:12533_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ2*01 F 265 100.00 53/53 nt Homsap IGHD4-17*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARRVTGDYGAYWYFDLW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacggcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagagtcaccggtgactacggagcctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3713 3712 M02948:184:000000000-JK6TB:1:1110:23664:12993_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 178 84.00 42/50 nt Homsap IGHD2-21*02 F 3 8 8 12 8.8.12 [3.17.38.11] CARDLAVVTWDDIW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatcttgcggtggtaacttgggatgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3714 3713 M02948:184:000000000-JK6TB:1:1110:24989:13199_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-10*01 F 2 8 8 20 8.8.20 [2.17.38.11] CASSYYYGSGSYYEVGYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagctcgtattactatggttcggggagttattatgaagtagggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3715 3714 M02948:184:000000000-JK6TB:1:1110:3471:13534_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1199 98.38 243/247 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 3 8 8 8 8.8.8 [11.17.38.11] CARQGQGDYW in-frame + aggggggtatctgaagatctcctgtaagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacatcgccatgtattactgtgcgagacagggtcagggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3716 3715 M02948:184:000000000-JK6TB:1:1110:6620:14328_1:N: productive Homsap IGHV1-69*19 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARVGAEYSSSWYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggatgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttggggccgagtatagcagcagctggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3717 3716 M02948:184:000000000-JK6TB:1:1110:11580:14425_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 205 90.00 45/50 nt Homsap IGHD3-3*01 F 2 8 8 24 8.8.24 [3.17.38.11] CARDRIPDFWSGLSLPIGGWPAFDIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcgtattcccgatttttggagtggcctatccctcccgattggggggtggcccgcttttgatatctggggccaagggacaatggtcatcgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 390 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3718 3717 M02948:184:000000000-JK6TB:1:1110:13707:15755_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1028 96.36 212/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD4-17*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARVTVTTNDAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatccgtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagttacggtgaccacaaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3719 3718 M02948:184:000000000-JK6TB:1:1110:6657:15785_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-2*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARVVPAADNWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtagtaccagctgcagacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3720 3719 M02948:184:000000000-JK6TB:1:1110:22850:16101_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD1-26*01 F 3 8 8 10 8.8.10 [3.17.38.11] CARALGGSYFWW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagcccttggtgggagctatttctggtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3721 3720 M02948:184:000000000-JK6TB:1:1110:20952:16229_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD5-24*01 ORF 1 8 8 14 8.8.14 [3.17.38.11] CARKMASDDYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaaagatggcttcggatgactactactacatggacgtctggggcaaagggaccacggtcaccgcctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3722 3721 M02948:184:000000000-JK6TB:1:1110:27210:17087_1:N productive Homsap IGHV3-21*07 (F), or Homsap IGHV3-48*04 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDYQVGAAFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccaaatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagattaccaagtgggagctgcttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3723 3722 M02948:184:000000000-JK6TB:1:1110:24711:17680_1:N productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD7-27*01 F 1 8 8 10 8.8.10 [2.17.38.11] CARDLTGDSDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcttactggggattcagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3724 3723 M02948:184:000000000-JK6TB:1:1110:20635:17759_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1041 97.26 213/219 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD3-9*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARVSRPADWFDPW in-frame + gcatctggatacaccttcaccagctactatatgcacttggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagtatcgagaccggctgactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3725 3724 M02948:184:000000000-JK6TB:1:1110:18686:18033_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F or Homsap IGHV4-59*13 F 1055 97.73 215/220 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD3-16*01 F 1 8 7 17 8.7.17 [3.17.38.11] CARSLRLRDPGYYYYMDVW in-frame + cactgtctctggtggctccatcagtagttactactggacctggatccggcagccccccgggaagggactggagtggattggttatatctattacactgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaggctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgaggtccctacgattgagggaccccggatactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3726 3725 M02948:184:000000000-JK6TB:1:1110:14328:18746_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-16*01 F 2 8 7 14 8.7.14 [3.17.38.11] CAREYVPYYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgcgggaatacgtgccctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3727 3726 M02948:184:000000000-JK6TB:1:1110:9003:19068_1:N: productive Homsap IGHV3-48*03 F 966 92.79 206/222 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD6-6*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARATSSSGYFDLW in-frame + gcagtctctggattcacctttaccaactttgccatgagctgggtccgccaggctccagggaaggggctggagtgggtatcatatattagtagcggtggtggtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcagatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagctacaagcagctcggggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3728 3727 M02948:184:000000000-JK6TB:1:1110:15341:19994_1:N productive (see comment) Homsap IGHV3-48*02 F 644 97.06 132/136 nt 96.32 131/136 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-20*01 F 3 7 X 10 7.X.10 [3.X.35.11] CARDDKWAFDFW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 38 of V-REGION: 87 nucleotides (from position 32 in the user submitted sequence), (do not cause frameshift) tgcagtctctggattcaccttcagtagctataactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtttctgcaaatgaacagcctgagagacgaggacacggccgtgtattactgtgcgagagacgataagtgggcgtttgacttctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 261 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3729 3728 M02948:184:000000000-JK6TB:1:1110:16968:20090_1:N productive Homsap IGHV1-2*02 F 987 94.52 207/219 nt Homsap IGHJ1*01 F (see comment) 143 75.00 39/52 nt Homsap IGHD2-2*01 F 3 8 8 9 8.8.9 [2.17.38.11] CATLVVPDTNW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaaccctagtagtaccagacactaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3730 3729 M02948:184:000000000-JK6TB:1:1110:23139:20868_1:N productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-19*01 F 1 8 8 16 8.8.16 [2.17.38.11] CATVRRGGGLRPNAFDIW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacagtgaggcggggcgggggcttgaggccgaatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3731 3730 M02948:184:000000000-JK6TB:1:1110:19661:23706_1:N productive Homsap IGHV1-2*02 F 969 93.61 205/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-25*01 F 1 8 8 12 8.8.12 [2.17.38.11] CASLANPGYSSVYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtctggcgaaccccgggtatagcagcgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3732 3731 M02948:184:000000000-JK6TB:1:1110:22681:24016_1:N productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-1*01 F 2 8 8 8 8.8.8 [3.17.38.11] CAREKLTDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacatcagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaagtcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagagaaacttaccgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3733 3732 M02948:184:000000000-JK6TB:1:1110:21486:24982_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F (see comment) 193 79.03 49/62 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAREVSSGHRSGGMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagaagttagcagtggtcatagatcgggcggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3734 3733 M02948:184:000000000-JK6TB:1:1109:15747:2263_1:N: productive (see comment) Homsap IGHV4-38-2*02 F, or Homsap IGHV4-39*07 F 1037 96.82 213/220 nt 96.36 212/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD2-15*01 F 2 8 7 19 8.7.19 [3.17.38.11] CARDIQLGYCSGGSCNGRDYW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT, from codon 31 of V-REGION: 3 nucleotides (from position 23 in the user submitted sequence), (do not cause frameshift) cactgtctctggtggctccatcagtagttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctaccacaacccgtccctcaagagtcgagtcaccatatcaatagacacgtccaagaaccaattctccctgaagctgacctctgtgaccgccgcagacacggccgtgtattactgtgcgagagatattcaactaggatattgtagtggtggtagctgcaacggaagggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3735 3734 M02948:184:000000000-JK6TB:1:1109:20066:2986_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1083 98.65 219/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD1-1*01 F 1 8 8 11 8.8.11 [3.17.38.11] CASGVTSDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccagggccaggtcaccatctcagccgacaactccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgtctggggtgacgtccgatgcttttgatatctggggcctagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3736 3735 M02948:184:000000000-JK6TB:1:1109:10816:3138_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD1-26*01 F 1 8 8 8 8.8.8 [3.17.38.11] CARDHSGYNW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcattcgggatacaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3737 3736 M02948:184:000000000-JK6TB:1:1109:7094:5171_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD7-27*01 F 3 8 8 19 8.8.19 [3.17.38.11] CARGRRTQMPMNWGGDGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagggcgtcgcacacaaatgcccatgaactggggaggcgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3738 3737 M02948:184:000000000-JK6TB:1:1109:21085:6017_1:N: productive Homsap IGHV3-7*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-10*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARVGLGYFDYW in-frame + tgcagcctctggattcagttttagtaactattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgaggaatactatctggactctgtgaagggccgattcaccatctccaaagacaacgccaagaactcactgtatctacaaatgaacagcctgagagccgaggacacgtctgtgtattactgtgcgagagtggggctcgggtactttgactactggggccagggaaccttggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3739 3738 M02948:184:000000000-JK6TB:1:1109:3911:6099_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1023 96.35 211/219 nt Homsap IGHJ1*01 F 260 100.00 52/52 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARGPLYYYDSSGLDAEYFQHW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagcacttccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagggcccctgtattactatgatagtagtggtttggacgctgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3740 3739 M02948:184:000000000-JK6TB:1:1109:6136:6798_1:N:0 productive Homsap IGHV1-18*01 F 1059 98.17 215/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-21*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARAGWDCGGDCYSLFDYW in-frame + gcttctggttacacctttaccagctatggtatcacctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccagagacacatccacgagcacagcctacatggagctgaggagcctgagatttgacgacacggctgtgtattactgtgcgagagcgggctgggattgtggtggtgattgctattccctttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3741 3740 M02948:184:000000000-JK6TB:1:1109:6791:9229_1:N:0 productive Homsap IGHV1-8*02 F 1041 97.26 213/219 nt Homsap IGHJ6*02 F 256 90.32 56/62 nt Homsap IGHD2-15*01 F 2 8 8 22 8.8.22 [2.17.38.11] CARSRPNCSGGSCYSRHYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcccgagatctgaggacacggccgtgtattactgtgcgagatcccgtccaaattgtagtggtggtagctgctactcccgacactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3742 3741 M02948:184:000000000-JK6TB:1:1109:2236:10332_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1195 100.00 239/239 nt Homsap IGHJ6*02 F (see comment) 175 75.81 47/62 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [8.17.38.11] CARDIAAAEASMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) ccctgagactctcctgtgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatatagcagcagccgaggccagtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3743 3742 M02948:184:000000000-JK6TB:1:1109:7685:10811_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD2-2*02 F 3 8 8 21 8.8.21 [3.17.38.11] CAKDSIVVVPAAIRQAYNWFDPW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggctcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagattcgattgtagtagtaccagctgctatacgacaagcgtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3744 3743 M02948:184:000000000-JK6TB:1:1109:5403:11239_1:N: productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1032 96.80 212/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-12*01 F 3 8 8 13 8.8.13 [2.17.38.11] CASGYSDYYYGMDVW in-frame + gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgaaggcctcggacaccgccatgtattactgtgcgagtggatacagtgactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3745 3744 M02948:184:000000000-JK6TB:1:1109:25166:13503_1:N productive Homsap IGHV3-21*07 (F) 980 93.27 208/223 nt Homsap IGHJ6*03 F (see comment) 175 75.81 47/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARERGYCSSTTCHRAPGYMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacaccctgagaggcgaggagacggctgtttattactgtgcgagagagagaggatattgcagtagtaccacttgccaccgagctcctgggtacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3746 3745 M02948:184:000000000-JK6TB:1:1109:23215:13957_1:N productive Homsap IGHV3-48*04 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 8 12 8.8.12 [3.17.38.11] CASVPYYRGPFDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagtgtgccctattatagggggccttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3747 3746 M02948:184:000000000-JK6TB:1:1109:17724:14378_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F (see comment) 992 94.55 208/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD5-24*01 ORF 3 8 7 15 8.7.15 [3.17.38.11] CARAHRDGYNYGYFDYW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR2-IMGT amino acid lengths (7 AA in M02948:184:000000000-JK6TB:1:1109:17724:14378_1:N; 8 AA in Homsap IGHV3-21*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcaccttcagtacctactggatgcactgggtccgccaagttccagggaaggggctggagtgggtctcatccattagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagcccatcgagatggctacaattacggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3748 3747 M02948:184:000000000-JK6TB:1:1109:24451:14393_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 12 8.8.12 [3.17.38.11] CYCSSTSCYPYDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgttattgtagtagtaccagctgctatccttatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3749 3748 M02948:184:000000000-JK6TB:1:1109:24852:14707_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ6*03 F (see comment) 238 87.10 54/62 nt Homsap IGHD6-13*01 F 1 8 8 29 8.8.29 [3.17.38.11] CARLEGGGIRRISFMYSSSSKGRYYYYMDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) aagggttctggatacaggtttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcgaggggggggggatacgaaggatcagttttatgtatagcagcagctcaaaaggacggtactactactacatggacgtatggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 404 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3750 3749 M02948:184:000000000-JK6TB:1:1109:29409:15782_1:N productive Homsap IGHV1-8*02 F 1023 96.35 211/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-2*03 F 2 8 8 17 8.8.17 [2.17.38.11] CAAPGYCSSTSCYRAFDIW in-frame + gcttctggaggcaccgtcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcggcccctggatattgtagtagtaccagctgctatcgtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3751 3750 M02948:184:000000000-JK6TB:1:1109:22295:15795_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD7-27*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARELAAWGFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaattggcagcctgggggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3752 3751 M02948:184:000000000-JK6TB:1:1109:20100:17493_1:N productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD3-9*01 F 1 8 8 23 8.8.23 [2.17.38.11] CARSGIGYFDWLLYHSYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagatcgggcataggatattttgactggttattataccactcctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3753 3752 M02948:184:000000000-JK6TB:1:1109:14423:19122_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1059 98.17 215/219 nt Homsap IGHJ1*01 F (see comment) 152 76.92 40/52 nt Homsap IGHD1-26*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARDRVSGSYSAW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatagggtgagtgggagctactcggcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3754 3753 M02948:184:000000000-JK6TB:1:1109:9273:19182_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [3.17.38.11] CAKASCSSTSCSIAYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagcgagttgtagtagtaccagctgctccatagcctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3755 3754 M02948:184:000000000-JK6TB:1:1109:23067:19492_1:N unproductive (see comment) Homsap IGHV7-4-1*01 F 1023 96.35 211/219 nt Homsap IGHJ1*01 F 260 100.00 52/52 nt Homsap IGHD3-22*01 F 1 8 8 34 8.8.34 [2.17.38.11] CARDPASVLL***WLLRWRSRHYRFLRAGAEYFQHW in-frame + rearranged sequence, stop codons gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaacaccaaccctgggaacccaacgtatgcccagggcttcacaggacggtttgtcttctccttggacacctctgtcagcacggcatatctgcagatctgcagcctaaaggctgaggacactgccgtgtattactgtgcgagagacccagcatccgtattactatgatagtagtggttattacgttggcgctcccgccactaccgctttctccgggcaggcgctgaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 416 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3756 3755 M02948:184:000000000-JK6TB:1:1109:13008:19546_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1091 99.55 219/220 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD6-25*01 F 2 8 7 11 8.7.11 [3.17.38.11] CAVMGADDAFDIW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtttattactgtgcggttatgggagcggatgatgcttttgatatctggggccaagagacaatggtcatcgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3757 3756 M02948:184:000000000-JK6TB:1:1109:4111:19551_1:N: productive (see comment) Homsap IGHV3-30*04 F, or Homsap IGHV3-30*15 F or Homsap IGHV3-30-3*03 F 980 93.27 208/223 nt 92.83 207/223 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-16*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARGALSDYSTYYYYYGMDVW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT at codon 85 of V-REGION: 'ACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATA' (57 nucleotides at position 164 to 220 in the user submitted sequence), (do not cause frameshift); tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatcatatgatggaagtaataaatactacgtagactccgtgaagggccgattcaccatctccagagacaattccaacACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcgctctttctgactactcaacctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 432 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3758 3757 M02948:184:000000000-JK6TB:1:1109:16286:19948_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-14*01 ORF 3 8 8 14 8.8.14 [3.17.38.11] CARQTSIRNYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacagacctcgatccggaactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3759 3758 M02948:184:000000000-JK6TB:1:1109:11025:20501_1:N unproductive (see comment) Homsap IGHV2-5*02 F 1002 89.16 222/249 nt Homsap IGHJ3*02 F (see comment) 23 70.00 7/10 nt 10 7 X 10.7.X [11.17.38.X] + rearranged sequence, stop codons, no junction found the JUNCTION has not been identified: the results for J-GENE may be unreliable acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 258 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3760 3759 M02948:184:000000000-JK6TB:1:1109:9513:21034_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ2*01 F (see comment) 202 86.79 46/53 nt Homsap IGHD5-24*01 ORF 3 8 8 14 8.8.14 [2.17.38.11] CARGFGRDGYWDFDPW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ5*02 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggggttcggtagagatggctactgggacttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3761 3760 M02948:184:000000000-JK6TB:1:1109:19842:21194_1:N productive Homsap IGHV3-48*04 F 1035 93.59 219/234 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*01 F 1 8 8 9 8.8.9 [7.17.38.11] CARDLWSNDYW in-frame + ctatgcgccttgccagcctctggattccccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtttctgcaaatgaacagcctgagagccgaggacacggctatatattattgtgcgagggacttatggtccaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 325 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3762 3761 M02948:184:000000000-JK6TB:1:1109:9734:21934_1:N: productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*03 F 1014 95.89 210/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-2*02 F 2 8 8 17 8.8.17 [2.17.38.11] CARDRGCSSTSCYTSYPCW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatcggggttgtagtagtaccagctgctatacgagttatccttgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3763 3762 M02948:184:000000000-JK6TB:1:1109:11539:22476_1:N productive Homsap IGHV1-8*01 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARAVAGNSVDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcagtggctggtaattcggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3764 3763 M02948:184:000000000-JK6TB:1:1108:20797:2149_1:N: unproductive (see comment) Homsap IGHV4-34*03 F 1005 95.43 209/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 3 8 7 11 8.7.11 [3.17.38.11] CARDTGNYHNDYW in-frame + rearranged sequence, stop codons cgctgtctatgatgggtccttcagtggttacttctagagctggattcgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgacttaccatgtcaatagacacgtccaagaaccagttctccctgaggctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagatactgggaactaccataatgactactggggccagggaaccctggtcgccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3765 3764 M02948:184:000000000-JK6TB:1:1108:15252:2538_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 3 8 8 17 8.8.17 [3.17.38.11] CAKDRGENQWLVLTVFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcggggagagaatcagtggctggtacttacggtgtttgactactggggccagggaaccctggtcaccgtttcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3766 3765 M02948:184:000000000-JK6TB:1:1108:16934:6514_1:N: productive Homsap IGHV3-48*02 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 175 75.81 47/62 nt Homsap IGHD2-15*01 F 2 8 8 22 8.8.22 [3.17.38.11] CASQGPRVCSGGSCYSGDPRGDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtatctgcaaatgaacagcctgagagacgaggacacggctgtgtattactgtgcgagtcaaggtccccgagtttgtagtggtggtagctgctactccggggatccacggggggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3767 3766 M02948:184:000000000-JK6TB:1:1108:24859:7637_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-19*01 F 1 8 8 22 8.8.22 [3.17.38.11] CARLHGGYGGDPNKGYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgcatggcgggtacggcggtgaccccaacaaggggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3768 3767 M02948:184:000000000-JK6TB:1:1108:28001:7677_1:N: productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD6-19*01 F 2 8 8 10 8.8.10 [2.17.38.11] CARIAEGAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaatagccgagggggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctatgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3769 3768 M02948:184:000000000-JK6TB:1:1108:22570:7745_1:N: productive Homsap IGHV3-11*06 F 1079 98.21 219/223 nt Homsap IGHJ4*01 F, or Homsap IGHJ4*03 F 150 79.17 38/48 nt Homsap IGHD3-9*01 F 2 8 8 7 8.8.7 [3.17.38.11] CLKDYQGDW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacacaaactacgtagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtttctgcaaatgaacagcctgagagtcgaggacacggctgtctattactgtttgaaggattaccagggggactggggccaagggacagtggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3770 3769 M02948:184:000000000-JK6TB:1:1108:26944:8330_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD2-15*01 F 3 8 8 20 8.8.20 [2.17.38.11] CARDLMEVAVPSLLESGWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatctaatggaggtagcagtgccatcccttctggaatccggttggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3771 3770 M02948:184:000000000-JK6TB:1:1108:7776:8477_1:N:0 productive Homsap IGHV3-30*07 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKDRCSGGSCITSSDYW in-frame + tgcagcctctggattcacctttaacagctatgccatgagctgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcggtgtagtggtggtagctgcatcacatccagtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3772 3771 M02948:184:000000000-JK6TB:1:1108:4802:8577_1:N:0 productive Homsap IGHV3-43D*04 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKDISRTYYYYAMDVW in-frame + tgccgcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtctctcttattagttgggatggtggtagcacatactatgcagactctgtgaagggtcgattcaccatctccagagacaacagcaaaaactccctgtatctgcaaatgaccagtctgagagctgaggacaccgccttgtattactgtgcaaaagatattagcaggacctactactactacgctatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3773 3772 M02948:184:000000000-JK6TB:1:1108:16079:9641_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 229 85.48 53/62 nt Homsap IGHD2-2*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARDRDLGYCSSTSCYRYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatagggatttaggatattgtagtagtaccagctgctatcgttacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3774 3773 M02948:184:000000000-JK6TB:1:1108:27790:9831_1:N: productive Homsap IGHV4-38-2*01 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-15*01 F 2 9 7 17 9.7.17 [3.17.38.11] CAREPGYCSGGSCRYFDYW in-frame + cgctgtctctggttactccatgagcagtggttactattggggctggatccggcagcccccagggcaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagatgaggtctgtgaccgctgcggacacggccgtgtattactgtgcgagagagcccggatattgtagtggtggtagctgccgttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3775 3774 M02948:184:000000000-JK6TB:1:1108:23112:10063_1:N productive Homsap IGHV3-30*07 F 1070 97.76 218/223 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD4-17*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDSYGDSYYYYYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatgctatgttctgggtccgccaggctccaggcaaggggctagagtgggtgacagttatgtcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagattcctacggtgactcttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3776 3775 M02948:184:000000000-JK6TB:1:1108:3853:11667_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1024 95.93 212/221 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-12*01 F 3 8 8 16 8.8.16 [2.17.38.11] CAKYSVGCGDYGPCFGYW in-frame + cagcctctggattcagctttagcatctatgccatgagctgggtccgccaggctccagggaaggggctggagtggttctcaggtattagtggtagtgggggaaccacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtctattattgtgcgaaatatagcgttggatgcggtgactacggtccctgctttggctactggggccagggaaccctggtcaccgtctccacagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3777 3776 M02948:184:000000000-JK6TB:1:1108:9468:11727_1:N: productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*02 F 897 98.91 181/183 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 2 X 8 14 X.8.14 [X.15.38.11] CARVPWIQLWRFFDYW in-frame + tgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagtcccgtggatacagctatggcggttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 289 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3778 3777 M02948:184:000000000-JK6TB:1:1108:18735:12344_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 980 93.27 208/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-9*01 F 3 8 8 11 8.8.11 [3.17.38.11] CAKNTLIYYFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtctcactcattagtagtagtggtagttacatatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgagcagcctgagagccgaagacacggccgtttattactgtgcgaaaaatacgctaatttattactttgactactggggccagggaaccctggtcaccgtctccccagggagtgcatccgccccaacccttttccccctcgtctcctatgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3779 3778 M02948:184:000000000-JK6TB:1:1108:13567:13147_1:N productive Homsap IGHV4-39*07 F 1094 98.23 222/226 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD2-2*01 F 2 10 7 21 10.7.21 [3.17.38.11] CARVDCSSTSCLRGYYYYGMDVW in-frame + cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattgggagtatctattatagtgggagcacctactacaacccgtccctcaagagtcgagttaccatatcagtagacacgtctaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggctgtgtattactgtgcgagagtagattgtagtagtaccagctgcctacgggggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaaccctttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 385 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3780 3779 M02948:184:000000000-JK6TB:1:1108:22989:14491_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 189 91.11 41/45 nt Homsap IGHD2-21*01 F 2 8 7 6 8.7.6 [3.17.38.11] CARDSVYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagattcagtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3781 3780 M02948:184:000000000-JK6TB:1:1108:6545:15676_1:N: productive Homsap IGHV3-48*03 F 1152 97.12 236/243 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-10*02 F 3 8 8 14 8.8.14 [10.17.38.11] CARGGTIFAESAFDIW in-frame + gggtccctgagactctcctgtgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagggggtacgatttttgcggagtcggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 349 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3782 3781 M02948:184:000000000-JK6TB:1:1108:13255:16396_1:N unproductive Homsap IGHV1-8*02 F 1068 98.63 216/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-22*01 F 2 8 8 X 8.8.X [2.17.38.11] CASEIVAG#DAFDIW out-of-frame + gcttctggaggcaccttcagcagctatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcgagatagtggcgggtatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 352 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3783 3782 M02948:184:000000000-JK6TB:1:1108:5148:16477_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [3.17.38.11] CVRAGGSNNGPGNW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtatattcctgtgtaagagccggtgggagcaacaacggcccggggaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3784 3783 M02948:184:000000000-JK6TB:1:1108:5950:17863_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F, or Homsap IGHJ5*01 F or Homsap IGHJ5*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 3 8 8 7 8.8.7 [3.17.38.11] CTRGGVDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattattgtacaagagggggggtggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3785 3784 M02948:184:000000000-JK6TB:1:1108:24238:19969_1:N productive Homsap IGHV4-61*01 F 1085 97.79 221/226 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD6-13*01 F 2 10 7 15 10.7.15 [3.17.38.11] CARDYIAGRYHYYMDVW in-frame + cactgtctctggtgactccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgagcctgacctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattatatagcaggccgctaccactactacatggacgtctggggcaaagggaccacagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3786 3785 M02948:184:000000000-JK6TB:1:1108:22035:20404_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDAGMWERRYYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcaaagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagacgcgggaatgtgggagaggaggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3787 3786 M02948:184:000000000-JK6TB:1:1108:23155:21501_1:N productive Homsap IGHV3-11*03 F, or Homsap IGHV3-11*05 F 1007 94.62 211/223 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-3*01 F 3 8 8 16 8.8.16 [3.17.38.11] CANSITIFGVGPYGMDVW in-frame + tgcagcctctggattcaccttcaatgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtggtagtgctagttacacaaactacgcagactccgtgaagggccgcttaaccatctccagagacaactccaagaacacgctgtttctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaacagtattacgatttttggagtgggcccctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3788 3787 M02948:184:000000000-JK6TB:1:1108:7508:21769_1:N: productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 1005 95.43 209/219 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-10*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARPTMVRDLDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacaacaaactacgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaccgactatggttcgggaccttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatttccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3789 3788 M02948:184:000000000-JK6TB:1:1108:11292:22050_1:N productive Homsap IGHV1-8*01 F, or Homsap IGHV1-8*02 F 870 100.00 174/174 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-10*02 F 3 X 8 23 X.8.23 [X.12.38.11] CAIFNPYTPFGELLVGYYYYGMDVW in-frame + caggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgatattcaatccctatactccgttcggggagttattagtgggttactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 307 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3790 3789 M02948:184:000000000-JK6TB:1:1108:16894:22904_1:N unproductive (see comment) Homsap IGHV3-7*03 F 1052 96.86 216/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 8 18 8.8.18 [3.17.38.11] CARDVYSSGWFPWSNYFDYW in-frame + rearranged sequence, stop codons tgcagcctcttgattcacctttagtgattattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaacaaggaactgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagacgtctatagcagtggctggttcccctggtctaactactttgactactggggccagggaattctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctccggtgagaagtcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3791 3790 M02948:184:000000000-JK6TB:1:1108:18241:23195_1:N productive Homsap IGHV1-18*01 F 1077 99.09 217/219 nt Homsap IGHJ6*03 F 241 89.83 53/59 nt Homsap IGHD2-8*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARGRDYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaagggactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctccggtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3792 3791 M02948:184:000000000-JK6TB:1:1107:9779:3951_1:N:0 unproductive Homsap IGHV3-11*04 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-25*01 F 2 8 8 X 8.8.X [3.17.38.11] CARAPNPNSYYSSGPG#YW out-of-frame + tgcagcctctggattcaatttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgtatctgcaaatgaacagcctgagagccggggacacggctgtgtattactgtgcaagagctcccaaccctaactcctattacagcagcggccccgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3793 3792 M02948:184:000000000-JK6TB:1:1107:16488:4573_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARLKRYYDSSGYYGTFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactaaaacgttactatgatagtagtggttattacggtacctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3794 3793 M02948:184:000000000-JK6TB:1:1107:12809:6299_1:N: productive Homsap IGHV1-8*01 F 897 89.95 197/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 3 8 8 10 8.8.10 [2.17.38.11] CATRVRSSDDYW in-frame + gcttctggttacatctttactagttatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacccgggttcggagttccgatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3795 3794 M02948:184:000000000-JK6TB:1:1107:13741:8317_1:N: No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgcagcctctggattcagttttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagcagactagggagtgcatccgccccaacccttttccacctcgtctcctgtgagaattcccctcgcgatat 0 0 297 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3796 3795 M02948:184:000000000-JK6TB:1:1107:11743:8710_1:N: productive Homsap IGHV2-5*02 F 1236 99.60 248/249 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 3 10 7 17 10.7.17 [11.17.38.11] CAHGKRVYSYVYGPHFDNW in-frame + acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatggccaacatggaccctgtggacacagccacatattactgtgcacacggtaaacgtgtatacagctatgtttatgggccccactttgacaactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 395 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3797 3796 M02948:184:000000000-JK6TB:1:1107:20413:9112_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 114 70.83 34/48 nt Homsap IGHD1-14*01 ORF 2 8 8 10 8.8.10 [2.17.38.11] CARFPGPGPMGW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagattcccgggacctggtccgatgggatggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3798 3797 M02948:184:000000000-JK6TB:1:1107:14953:9576_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 2 8 8 23 8.8.23 [3.17.38.11] CAKANYCSSTSCYPAYYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaaagccaattattgtagtagtaccagctgctaccccgcttactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 387 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3799 3798 M02948:184:000000000-JK6TB:1:1107:10483:10035_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 211 88.68 47/53 nt Homsap IGHD1-1*01 F 3 8 8 9 8.8.9 [2.17.38.11] CARVDWSMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtagactggagtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgtgaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3800 3799 M02948:184:000000000-JK6TB:1:1107:7805:10231_1:N: productive Homsap IGHV3-7*01 F 1088 98.65 220/223 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD7-27*01 F 3 8 8 17 8.8.17 [3.17.38.11] CARDLGELNWGGSSAFDIW in-frame + tgcagcctctggatttacctttagtagctattggatgacctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgagcagcctgagagccgaggacacggctgtgtattactgtgcgagagatttgggagaactcaactggggaggctcgagtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3801 3800 M02948:184:000000000-JK6TB:1:1107:2703:10633_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 888 89.50 196/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-8*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARQYCTNGVCYDYW in-frame + gcttctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcggagtcacgattaccgcggacgaatccacgagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggcaatattgtactaatggtgtatgctatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3802 3801 M02948:184:000000000-JK6TB:1:1107:13737:10880_1:N productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD4-11*01 ORF 2 8 8 14 8.8.14 [2.17.38.11] CARAYSNYYYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaatctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcctacagtaactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3803 3802 M02948:184:000000000-JK6TB:1:1107:18293:13988_1:N productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-10*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARTRRGNWFDPW in-frame + gcttctggttacacctttaccagctatggcatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaacacggcggggaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccgatgagaagtcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3804 3803 M02948:184:000000000-JK6TB:1:1107:18198:14050_1:N productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-26*01 F 3 8 8 19 8.8.19 [3.17.38.11] CARDHLNSGSWLRENNWFDPW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatcatttgaatagtgggagctggctgcgggaaaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccggtgtgaagtcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3805 3804 M02948:184:000000000-JK6TB:1:1107:15159:14183_1:N productive Homsap IGHV3-30*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 1 8 8 16 8.8.16 [3.17.38.11] CARVGGGILLWFGEVDYW in-frame + tgcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagtgggtgggggcatattactatggttcggagaagttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3806 3805 M02948:184:000000000-JK6TB:1:1107:16016:14586_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [2.17.38.11] CVASLSGWYNDGMDVW in-frame + gcttttggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgttgctagtctcagtggctggtacaacgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3807 3806 M02948:184:000000000-JK6TB:1:1107:22899:15030_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F (see comment) 178 84.00 42/50 nt Homsap IGHD4-17*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARLLDGVRMGAFDIW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactccttgacggtgtgcggatgggggcttttgatatctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3808 3807 M02948:184:000000000-JK6TB:1:1107:28850:16097_1:N productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ1*01 F, or Homsap IGHJ5*02 F (see comment) 136 76.60 36/47 nt Homsap IGHD6-6*01 F 2 8 8 7 8.8.7 [2.17.38.11] CARDLRPIW in-frame + other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaaggacttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatcttcgccctatctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3809 3808 M02948:184:000000000-JK6TB:1:1107:23015:16683_1:N productive Homsap IGHV3-53*01 F, or Homsap IGHV3-53*02 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F (see comment) 174 82.35 42/51 nt Homsap IGHD1-26*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARDRLSGSYHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatcgtcttagtgggagctaccactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3810 3809 M02948:184:000000000-JK6TB:1:1107:25694:17395_1:N unproductive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1152 99.15 232/234 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-12*01 F 3 8 8 X 8.8.X [7.17.38.11] CAKGVVDIVAIQY#DAFDIW out-of-frame + caggtctcctgcaaggcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtatattactgtgcgaaaggtgtcgtggatatagtggctatacaatatcggacgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3811 3810 M02948:184:000000000-JK6TB:1:1107:17293:17530_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD6-19*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARPGYSSGWDWYFDLW in-frame + aagggttctggatacagcttcaccagcttctggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacctgggtatagcagtggctgggactggtacttcgatctctggggccgtggtaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3812 3811 M02948:184:000000000-JK6TB:1:1107:5986:18174_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD5-12*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARYSGYDYNWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagatatagtggctacgattacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3813 3812 M02948:184:000000000-JK6TB:1:1107:12983:18445_1:N productive Homsap IGHV3-7*03 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARDSSGWYYFDYW in-frame + tgcagcctctggattcacctttagaagctattggatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaactgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaaggactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatagcagtggctggtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3814 3813 M02948:184:000000000-JK6TB:1:1107:11498:18961_1:N No rearrangement found Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F (see comment) 831 80.23 207/258 nt 10 9 X 10.9.X [13.17.36.X] + no rearrangement found low V-REGION identity (80.23%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release atatcgcgaggggaattctctcactcacctgtgccatctccggggacagtgtcttaaacaacattgctacctggaactggatcaggcagtccccatcgagaggccttgaatggctgggaaggacatcctacaggtccaagtggttttacgattatgcaccatctgtgaaaagtcgaataaccatcaaccccgacacatccaagaaccagttctccctgcacctggtccgtggtgcatccgccccaacccttttccccc 0 0 258 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3815 3814 M02948:184:000000000-JK6TB:1:1107:7136:20424_1:N: No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F (see comment) 440 66.37 148/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found low V-REGION identity (66.37%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtatattactgtgcgaagattgcggggggctgggtactagcagcagctggttggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 276 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3816 3815 M02948:184:000000000-JK6TB:1:1107:14904:20702_1:N productive Homsap IGHV1-3*04 (F) 1041 97.26 213/219 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD5-12*01 F 3 8 8 13 8.8.13 [2.17.38.11] CAKGYSGYDYAFDIW in-frame + gcttctggatacaccttcactagttctgctatgcattgggtgcgccaggcccccggacagaggcttgagtggatgggatggatcaacactggcaatggtaacacaaaatattcacagaagttccagggcagagtcaccttcaccagggacacatccgcgagcacagcctacatggagctgagcagcctgagatctgaagacacggctgtgttttactgtgcgaagggatatagtggctacgattacgcttttgatatctggggccaggggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3817 3816 M02948:184:000000000-JK6TB:1:1107:11410:21090_1:N productive Homsap IGHV1-58*01 F, or Homsap IGHV1-58*03 (F) 1095 100.00 219/219 nt Homsap IGHJ6*04 F (see comment) 162 73.02 46/63 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [2.17.38.11] CAAERSSGWYVVGDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) gcttctggattcacctttactagctctgctgtgcagtgggtgcgacaggctcgtggacaacgccttgagtggataggatggatcgtcgttggcagtggtaacacaaactacgcacagaagttccaggaaagagtcaccattaccagggacatgtccacaagcacagcctacatggagctgagcagcctgagatccgaggacacggccgtgtattactgtgcggcagaaagaagcagtggctggtatgtggtcggggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3818 3817 M02948:184:000000000-JK6TB:1:1107:5863:21936_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1014 95.89 210/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 3 8 8 18 8.8.18 [2.17.38.11] CATGVDYSGSYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaggggttgactatagtgggagctactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3819 3818 M02948:184:000000000-JK6TB:1:1107:9579:22835_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 8 12 8.8.12 [3.17.38.11] CAASSGWSGVADYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgccgcaagcagtggctggtccggggttgctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3820 3819 M02948:184:000000000-JK6TB:1:1107:22422:24095_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARLFGGSYPYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactatttggtgggagctacccatactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3821 3820 M02948:184:000000000-JK6TB:1:1106:13327:2661_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 980 93.27 208/223 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-10*01 F 1 8 8 22 8.8.22 [3.17.38.11] CAKAMWFGELFERGERTHDAFDIW in-frame + tgcagcctctggattcaccttcagtaactactggatgcactgggtccgccaagctccaggaaaggggctagtctgggtctcacgtattagcaatgatgggagtactacaatctacgcggactccgtgaagggccggttcaccatctccagagacaacgccaacaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagctatgtggttcggggagttatttgaacgtggggaacgaacccatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3822 3821 M02948:184:000000000-JK6TB:1:1106:14121:2674_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD1-26*01 F 1 8 8 13 8.8.13 [2.17.38.11] CARGLWGGATPLGYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggcctctgggggggagctacccccttaggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3823 3822 M02948:184:000000000-JK6TB:1:1106:5841:3643_1:N:0 productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARLGIAVAGTGDQPDYW in-frame + taagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgggtatagcagtggctggtacgggggaccaacctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3824 3823 M02948:184:000000000-JK6TB:1:1106:14468:4538_1:N: productive Homsap IGHV3-43D*04 F 1196 99.59 240/241 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-6*01 F 2 8 8 15 8.8.15 [9.17.38.11] CAKVGARTYYYYGMDVW in-frame + gtccctgagactcgcctgtgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtctctcttattagttgggatggtggtagcacatactatgcagactctgtgaagggtcgattcaccatctccagagacaacagcaaaaactccctgtatctgcaaatgaacagtctgagagctgaggacaccgccttgtattactgtgcaaaagtaggcgctcgtacctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3825 3824 M02948:184:000000000-JK6TB:1:1106:13230:5715_1:N: productive Homsap IGHV4-61*01 F 1058 96.46 218/226 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-13*01 F 1 10 7 14 10.7.14 [3.17.38.11] CARGDSSGWTHFFDCW in-frame + cactgtctctggtgactccgtcagtagaggtagttattactggagctggatccggcagcccccagggaagggactggagtggattgggtatgtctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgacctctgcgaccgctgcggacacggccgtatattactgtgcgagaggcgatagcagcggctggacccacttctttgactgctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3826 3825 M02948:184:000000000-JK6TB:1:1106:10810:6433_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARAVAGNSVDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagcagtggctggtaattcggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3827 3826 M02948:184:000000000-JK6TB:1:1106:7238:8988_1:N:0 productive Homsap IGHV3-13*01 F 956 92.73 204/220 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD6-13*01 F 2 8 7 9 8.7.9 [3.17.38.11] CARGAAAGDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccgtcaagctccggggaagggtctggagtgggtctcagctatcggtactgctggtgacacatactatccaggctccgtgaagggccgattcaccatctccagagaaaatgccaagaactccttgtatcttcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaggggcagcagctggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3828 3827 M02948:184:000000000-JK6TB:1:1106:11646:9328_1:N: productive (see comment) Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 928 91.74 200/218 nt 91.28 199/218 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-22*01 F 3 8 7 10 8.7.10 [2.17.38.11] CTMIVAQAFDIW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 62 of V-REGION: 1 nucleotides (from position 96 in the user submitted sequence), (cause frameshift) gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatcttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtactatgatagtagcccaggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 343 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3829 3828 M02948:184:000000000-JK6TB:1:1106:12703:9360_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD2-2*01 F 3 8 8 19 8.8.19 [2.17.38.11] CARVTVPAAPPYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtcacagtaccagctgcacccccttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3830 3829 M02948:184:000000000-JK6TB:1:1106:15122:9363_1:N: productive Homsap IGHV3-11*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-26*01 F 1 8 8 15 8.8.15 [3.17.38.11] CASGAAGISDYYGMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagtggagctgctggcatttcggactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3831 3830 M02948:184:000000000-JK6TB:1:1106:9511:10215_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD1-7*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARRRGTATHWYFDLW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggagaggaactgcaactcactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3832 3831 M02948:184:000000000-JK6TB:1:1106:15506:11105_1:N unproductive (see comment) Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1007 94.62 211/223 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-3*01 F 1 8 8 X 8.8.X [3.17.38.11] CAKDPRRDFWSG*WR#YYYYGMDVW out-of-frame + rearranged sequence, stop codons tgcagcctctggattcacctttaacaactatgccataaactgggtccgccaggctccagggaaggggctggagtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcgaaagatcccagacgcgatttttggagtggttagtggaggggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 386 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3833 3832 M02948:184:000000000-JK6TB:1:1106:9376:11412_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-18*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARGRGYSYGPFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggcgtggatacagctatggtccctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3834 3833 M02948:184:000000000-JK6TB:1:1106:2738:11919_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 928 98.43 188/191 nt Homsap IGHJ6*03 F 292 96.77 60/62 nt Homsap IGHD1-1*01 F 2 0 8 16 0.8.16 [X.17.38.11] CARGQPTPYYYYYYMDVW in-frame + ccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggccaacccaccccttactactactattactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 303 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3835 3834 M02948:184:000000000-JK6TB:1:1106:23287:12102_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-3*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARQGGVTIFGVVMRAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaagggggagttacgatttttggagtggttatgcgtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3836 3835 M02948:184:000000000-JK6TB:1:1106:6490:12182_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD6-19*01 F 3 8 8 14 8.8.14 [3.17.38.11] CAKTMGGVWLGAFDIW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaacgatgggaggggtgtggctgggagcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3837 3836 M02948:184:000000000-JK6TB:1:1106:9024:12309_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-15*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARLTGVVGGRCDYW in-frame + aagggttctggatacagctttaccagctattggatcggctgggtgcgccagatgcccgggaaaggcctggaatggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcagcatctcagtcgacaagtccatcagcaccgcctacgtgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcaccggggtggtgggaggtcgttgtgattactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3838 3837 M02948:184:000000000-JK6TB:1:1106:3596:12362_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-15*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARAGWCSGGSCYSYWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggcggggtggtgtagtggtggtagctgctactcctactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3839 3838 M02948:184:000000000-JK6TB:1:1106:1823:12655_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1052 96.86 216/223 nt Homsap IGHJ6*03 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 2 8 8 25 8.8.25 [3.17.38.11] CARAVGRPRGCSSTSCAFPGYYYMDVW in-frame + tgcagcctctggattcaccttcactagttatagcatgaactgggtccgccagtctccagggaaggggctggagtggctctcatccattagtagtgatagtggttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagctgtcggccggccccggggttgtagtagtaccagctgcgccttcccgggctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaccccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 393 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3840 3839 M02948:184:000000000-JK6TB:1:1106:6767:15278_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD4-17*01 F 1 8 8 13 8.8.13 [3.17.38.11] CAGEAGLRLYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgggagaggccggactacgcctgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcttctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3841 3840 M02948:184:000000000-JK6TB:1:1106:6474:16013_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD3-3*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARDSLFWSGSDYW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagattcccttttttggagtggttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3842 3841 M02948:184:000000000-JK6TB:1:1106:13810:17854_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*03 F (see comment) 184 77.42 48/62 nt Homsap IGHD3-10*01 F 1 8 8 13 8.8.13 [3.17.38.11] CARHVGEFSSPMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtcggggagttcagcagccccatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3843 3842 M02948:184:000000000-JK6TB:1:1106:21425:18516_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD3-10*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARDDYYGSGSYVYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaggggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgattactatggttcggggagttatgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3844 3843 M02948:184:000000000-JK6TB:1:1106:27399:18651_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD4-17*01 F 2 8 8 17 8.8.17 [2.17.38.11] CARGGYGDYVSYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcggctacggtgactacgtgtcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3845 3844 M02948:184:000000000-JK6TB:1:1106:27417:18827_1:N No rearrangement found Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F or Homsap IGHV5-51*05 F 921 90.54 201/222 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found aagggttctggatacagctttaccaactactggatcggctgggtgcgccagatgcccgggaaaggcctggaatggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcaggcgacaagtccatcagcaccgcctacctgcagtggagcagccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 278 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3846 3845 M02948:184:000000000-JK6TB:1:1106:25698:19049_1:N productive Homsap IGHV1-8*01 F 1068 98.63 216/219 nt Homsap IGHJ2*01 F (see comment) 157 77.36 41/53 nt Homsap IGHD1-1*01 F 3 8 8 9 8.8.9 [2.17.38.11] CATYNWNDVGW in-frame + other possibilities: Homsap IGHJ4*02 and Homsap IGHJ5*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccgctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctgtgcacagaagttccagggcagagtcaccatgaccagggacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgacgtacaactggaacgacgtaggctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3847 3846 M02948:184:000000000-JK6TB:1:1106:27378:19118_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-22*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARGLLSSYYDSSGYYYGYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagaggactcctaagttcatattatgatagtagtggttattactatggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatctgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3848 3847 M02948:184:000000000-JK6TB:1:1106:26169:20919_1:N productive Homsap IGHV3-11*01 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD2-8*02 F 1 8 8 8 8.8.8 [3.17.38.11] CASWGSRVYW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagttgggggagtagggtatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctggagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3849 3848 M02948:184:000000000-JK6TB:1:1106:21698:21352_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD2-2*01 F 2 8 7 22 8.7.22 [3.17.38.11] CARGTIGYCSSTSCYRHYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggacgataggatattgtagtagtaccagctgctacaggcactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3850 3849 M02948:184:000000000-JK6TB:1:1106:26002:21407_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD5-12*01 F 3 8 7 20 8.7.20 [3.17.38.11] CARDYRGYSGYERDYYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagattaccgtggatatagtggctacgaaagagactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3851 3850 M02948:184:000000000-JK6TB:1:1106:18784:21564_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F or Homsap IGHV4-59*13 F 1046 97.27 214/220 nt Homsap IGHJ6*03 F (see comment) 256 90.32 56/62 nt Homsap IGHD7-27*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARGHLGYYYYMGVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagtagttcctactggagctggatccggcagccccccgggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcaatagactcgtccaagaaccagttctccctgaagctgaccgctgtgaccgctgcggacacggccgtgtattactgtgcgagaggtcacttgggctactactactacatgggcgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3852 3851 M02948:184:000000000-JK6TB:1:1106:11140:22869_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 953 91.93 205/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-21*02 F 3 8 8 13 8.8.13 [3.17.38.11] CAKDLAVDVPVFDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagccatcagtggtagcggtggaaccttatattatgtagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagacttagcagtggacgtgcctgtctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3853 3852 M02948:184:000000000-JK6TB:1:1106:14220:23388_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 228 94.12 48/51 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARHGDEGTWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacggtgacgaagggacctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3854 3853 M02948:184:000000000-JK6TB:1:1106:19236:24141_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1145 100.00 229/229 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [5.17.38.11] CARLRGGSGWAGDDYW in-frame + ctcctgtaagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactgcggggcggcagtggctgggctggagatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3855 3854 M02948:184:000000000-JK6TB:1:1106:18117:24621_1:N No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1007 94.62 211/223 nt 8 8 X 8.8.X [3.17.38.X] + no rearrangement found tgtagcgtctggattcccctttaatctctattggatgagttgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 282 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3856 3855 M02948:184:000000000-JK6TB:1:1106:18865:24813_1:N productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD3-3*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARGGDFWSGYYNWFDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatggaatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcggcgatttttggagtggttattacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3857 3856 M02948:184:000000000-JK6TB:1:1105:19609:2850_1:N: productive Homsap IGHV3-48*02 F, or Homsap IGHV3-48*04 F 1034 95.96 214/223 nt Homsap IGHJ6*02 F 197 80.33 49/61 nt Homsap IGHD3-3*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARDRISNYGMDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccaggggcggggctggagtgggtttcatacattagtagtggtggtagtaccatatactatgcagactctgtgaagggccgattcaccatctccagggacaacgccaagaactcactgtatctgcaaatgaacagcctgagagacgaggacacggccgtgtattattgtgcgagagatcggataagtaattacggaatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3858 3857 M02948:184:000000000-JK6TB:1:1105:14758:3219_1:N: productive Homsap IGHV1-24*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD6-13*01 F 1 8 8 21 8.8.21 [2.17.38.11] CATAPRGNSSSWSDYYYYGMDVW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacggccccaagggggaatagcagcagctggtcagactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3859 3858 M02948:184:000000000-JK6TB:1:1105:12413:3231_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 996 94.98 208/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD5-12*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARDRVVATTKYYYYYGMDVW in-frame + gcatctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagatagggtagtggctacgactaaatactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3860 3859 M02948:184:000000000-JK6TB:1:1105:23984:3500_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F (see comment) 138 74.51 38/51 nt Homsap IGHD6-19*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARSQSTMIVVAAW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagccaatctactatgatagtagtggcggcgtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3861 3860 M02948:184:000000000-JK6TB:1:1105:18606:3523_1:N: productive Homsap IGHV3-48*03 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-11*01 ORF 2 8 8 15 8.8.15 [3.17.38.11] CARDAYSNYERFMFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacatcagtactagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatccccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagacgcatacagtaactacgagcgctttatgtttgactactggggccagggaaccctggtcaccgtctcctcagggagcgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3862 3861 M02948:184:000000000-JK6TB:1:1105:6054:5024_1:N:0 productive Homsap IGHV4-38-2*02 F 1088 98.65 220/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD5-24*01 ORF 2 9 7 15 9.7.15 [3.17.38.11] CARGGRLPQILDAFDIW in-frame + cactgtctctggtggctccgtcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagaggaggaaggctaccgcagattttagatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3863 3862 M02948:184:000000000-JK6TB:1:1105:25030:5279_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-9*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARGLDGDYSDDAFDIW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcctcgatggagattattccgatgatgcttttgatatctggggccaagggacaatggtcaccgcctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3864 3863 M02948:184:000000000-JK6TB:1:1105:17925:5351_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-10*01 F 3 8 8 8 8.8.8 [3.17.38.11] CARRGVRQIW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgaggcggggcgttcgtcagatctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3865 3864 M02948:184:000000000-JK6TB:1:1105:18893:5383_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 998 94.17 210/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 3 8 8 10 8.8.10 [3.17.38.11] CAREGYYYFDHW in-frame + tgcagcctctggattcaccttcagtatctatagactaaactgggtccgccaggctccagggaaggggctggagtgggtctcatccatcagtagtggtggtgattacataaactacgcagactcggtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaagtgaacagcctgagagccgaggacacggctgtttattactgtgcgagagaaggatactactactttgaccactggggccagggaaccctggtcaccgcctcctcatggagtgcatccgccccaacccttttccccatcgtctcctgtgagaatccacctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3866 3865 M02948:184:000000000-JK6TB:1:1105:24254:6288_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD4-17*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKLHDYGDYEDAFDIW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaaactccatgactacggtgactacgaggacgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3867 3866 M02948:184:000000000-JK6TB:1:1105:10102:8587_1:N: productive Homsap IGHV4-61*01 F 1094 98.23 222/226 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 3 10 7 10 10.7.10 [3.17.38.11] CARVGEGAFDYW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatccataacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatattagttgacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagtaggtgagggagcgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3868 3867 M02948:184:000000000-JK6TB:1:1105:26719:8748_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ6*04 F 194 83.64 46/55 nt Homsap IGHD1-1*01 F 3 8 8 9 8.8.9 [3.17.38.11] CAKNLSALDVW in-frame + tgcagcctctggattcaccttcagtagctatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaacctgagcgccctggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3869 3868 M02948:184:000000000-JK6TB:1:1105:22434:8863_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 3 8 7 13 8.7.13 [3.17.38.11] CARSYSYGHEGVDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagatcatacagctatggccacgagggtgttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3870 3869 M02948:184:000000000-JK6TB:1:1105:28144:9611_1:N: productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F or Homsap IGHV3-33*08 F 1066 99.53 214/215 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD6-13*01 F 1 8 8 17 8.8.17 [0.17.38.11] CARGRTGDRTSRINWFDPW in-frame + atggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggtagaactggggatcgcacaagccggatcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 330 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3871 3870 M02948:184:000000000-JK6TB:1:1105:7219:10837_1:N: productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*05 F 1059 98.17 215/219 nt Homsap IGHJ6*04 F 196 88.00 44/50 nt Homsap IGHD1-26*01 F 2 8 8 8 8.8.8 [2.17.38.11] CARDWDTDVW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggatcaacgctggcaatggtaacacaaaatattcacagaagttccagggcagagtcactattagcagggacacatccgcgagcacagcctacatggacctgagcagcctgagatccgaagacacggctgtgtattactgtgcgagagattgggatactgacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3872 3871 M02948:184:000000000-JK6TB:1:1105:19503:11404_1:N productive Homsap IGHV3-7*01 F 1025 95.52 213/223 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-15*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARTRGEGSYSAFDIW in-frame + tgcagcctctggattcacctttagtaactactggatgacctggttccgccaggctccagggaaggggctggagtgggtggccaacataaagtatgatagaagtgagaaatactatgtggactctgtgaagggccgattcgccatctccagagacaacgccaagaacgcactgtctctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaacacggggagagggtagttacagtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3873 3872 M02948:184:000000000-JK6TB:1:1105:15951:13352_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARGGPYSYGSEFVYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggggggggccatacagctatggttctgaattcgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3874 3873 M02948:184:000000000-JK6TB:1:1105:4353:13353_1:N: unproductive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-24*01 ORF 1 8 8 X 8.8.X [2.17.38.11] CAREVWLDGNRQQ#DYW out-of-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaggtttggctggatggcaacagacagcaacgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3875 3874 M02948:184:000000000-JK6TB:1:1105:20328:13866_1:N productive Homsap IGHV3-64*04 F 1043 96.41 215/223 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt 8 8 9 8.8.9 [3.17.38.11] CARDAPAFDIW in-frame + ttcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaagggactggaatatgtttcagctattagtagtaatgggggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgaaaaccgaggacacagccgtgtattactgtgcgagagatgcgccggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3876 3875 M02948:184:000000000-JK6TB:1:1105:9034:14492_1:N: productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARQEWELSFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagacaggagtgggagctatcttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3877 3876 M02948:184:000000000-JK6TB:1:1105:18096:15741_1:N productive Homsap IGHV3-33*01 F, or Homsap IGHV3-33*06 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARSPPVAGHFDYW in-frame + tgcagcgtctggattcaccttcagtagctatggcatgcactgggtccgccaggctccaggcaaggggctggagtgggtggcagttatatggtatgatggaagtaataaatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagatcaccgccagtggctggccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3878 3877 M02948:184:000000000-JK6TB:1:1105:3979:16144_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1100 97.82 224/229 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-19*01 F 2 8 8 15 8.8.15 [5.17.38.11] CARDGGIAVADDAFDIW in-frame + atgctgtgcagcagctggattcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattattgtgcaagagatggtgggatagcagtggcggatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3879 3878 M02948:184:000000000-JK6TB:1:1105:15341:17794_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD1-26*01 F 1 8 8 16 8.8.16 [2.17.38.11] CARTPEEGATPNNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaaccccggaggagggagctacccccaacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3880 3879 M02948:184:000000000-JK6TB:1:1105:15979:21119_1:N productive Homsap IGHV1-8*01 F 1032 96.80 212/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD6-6*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARGPRTGYSSSPDSYYFDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgaacagcctgagatctgaggacacggccgtgtattactgtgcgagagggccacgtacggggtatagcagctcgcccgactcttactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3881 3880 M02948:184:000000000-JK6TB:1:1105:6202:22628_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F or Homsap IGHV3-74*03 F 1034 95.96 214/223 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAREGVYCSGGSCYLAAFDIW in-frame + tgcagcctctggattcaccttcagtagctactggatgcactgggtccgccaagctccaggggaggggctggtgtgggtctcacgtattaagagtgatgagagtagtataaggtatgcggactccgtgaagggccgattcaccatctccagagacaacggcaagaacacggtgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagagggggtatattgtagtggtggtagctgttacctggccgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3882 3881 M02948:184:000000000-JK6TB:1:1105:19445:23718_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-24*01 ORF 3 8 8 17 8.8.17 [3.17.38.11] CARLNIGGDGYNRQPNDYW in-frame + aagggttctggatacagctctaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtcctttcaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttaatattggcggagatggctacaatcgacaaccgaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3883 3882 M02948:184:000000000-JK6TB:1:1105:20908:23833_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-3*01 F 3 8 8 13 8.8.13 [2.17.38.11] CARGTRSGEVYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtacgcggtctggtgaggtttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3884 3883 M02948:184:000000000-JK6TB:1:1105:7870:24114_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1007 94.62 211/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD1-7*01 F 3 8 8 12 8.8.12 [3.17.38.11] CAKATSWDSYFDYW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagcgacttcatgggactcatactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3885 3884 M02948:184:000000000-JK6TB:1:1104:14037:2780_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 150 79.17 38/48 nt Homsap IGHD3-9*01 F 2 8 8 13 8.8.13 [2.17.38.11] CASTYYDILTGYFQW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcacctattacgatattttgactggttatttccagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgataattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3886 3885 M02948:184:000000000-JK6TB:1:1104:10440:3260_1:N: productive Homsap IGHV3-7*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-6*01 F 1 8 8 18 8.8.18 [3.17.38.11] CAKRRLEFGSHSHYGDDDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaggaggttagagtttggcagccattctcactatggggacgatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3887 3886 M02948:184:000000000-JK6TB:1:1104:15561:3602_1:N: productive (see comment) Homsap IGHV3-48*03 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt 8 8 10 8.8.10 [3.17.38.11] CARDRGDGYNLG (see V-DOMAIN Functionality comment) in-frame + IMGT/JunctionAnalysis gives no results for this JUNCTION; TRP 118 not identified tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagagatcggggagatggctacaatttgggaggccagggaaccctggtcaccgtctcctcggggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3888 3887 M02948:184:000000000-JK6TB:1:1104:19393:3756_1:N: productive Homsap IGHV3-9*01 F 1115 100.00 223/223 nt Homsap IGHJ2*01 F 220 90.57 48/53 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CAKDTGGSYPGSGYFDLW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatacgggtgggagctacccgggaagtgggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3889 3888 M02948:184:000000000-JK6TB:1:1104:11930:3881_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 168 83.33 40/48 nt Homsap IGHD3-9*01 F 3 8 8 12 8.8.12 [3.17.38.11] CARDPPDLLVMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatcccccagacctactcgttatggacgtctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3890 3889 M02948:184:000000000-JK6TB:1:1104:18890:4585_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 922 98.94 186/188 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 X 8 19 X.8.19 [X.16.38.11] CARDGPLGYCSSTSCYVFDYW in-frame + tgagctgggtccgccaggctcccgggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatggtcccttgggatattgtagtagtaccagctgctatgtttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 309 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3891 3890 M02948:184:000000000-JK6TB:1:1104:17738:6272_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*02 F 1082 93.12 230/247 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 1 8 8 12 8.8.12 [11.17.38.11] CARLGGYSSSHDYW in-frame + cggggtgtctctgctgatctcctgtaaggtttctggatacagctttaccagctactggttcgtctttgtgcgccagattcccggtaaaggcttggagtggacggtgatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatttattactgtgcgagacttggtgggtatagcagcagtcatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3892 3891 M02948:184:000000000-JK6TB:1:1104:9443:6453_1:N:0 productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD2-2*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARDGCTTCSAYYGMDVW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatggctgtaccacctgctctgcctactacggaatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3893 3892 M02948:184:000000000-JK6TB:1:1104:19443:6875_1:N: productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARITMVRGVIREFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggattactatggttcggggagttattagagaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3894 3893 M02948:184:000000000-JK6TB:1:1104:18060:7214_1:N: productive Homsap IGHV3-21*04 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-26*01 F 1 8 8 11 8.8.11 [3.17.38.11] CGRGGREGAIDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtctctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgggagaggtggtcgggagggagctattgactactggggcctgggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3895 3894 M02948:184:000000000-JK6TB:1:1104:16409:7695_1:N: productive (see comment) Homsap IGHV3-48*03 F (see comment) 1019 95.91 211/220 nt 95.45 210/220 nt Homsap IGHJ5*02 F 192 86.27 44/51 nt Homsap IGHD2-8*01 F 2 8 7 14 8.7.14 [3.17.38.11] YAREPTNGDQPPLDPW in-frame + potentially, because of detected insertion/deletion 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release in CDR2-IMGT, from codon 60 of V-REGION: 3 nucleotides (from position 98 in the user submitted sequence), (do not cause frameshift) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccagactccagggaaggggctggagtgggtttcatacattactagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattattatgcgagagagcctactaacggtgaccaaccccccctcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3896 3895 M02948:184:000000000-JK6TB:1:1104:21309:7813_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD2-2*02 F 2 8 7 20 8.7.20 [3.17.38.11] CARQGRLCSTSCLTLAIYMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggacggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagacagggtcgtctttgcagtaccagctgcttaaccctggccatctacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3897 3896 M02948:184:000000000-JK6TB:1:1104:24530:7918_1:N: No rearrangement found Homsap IGHV7-4-1*02 F 1095 100.00 219/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggatacaccttcactagctatgctatgaattgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaacaccaacactgggaacccaacgtatgcccagggcttcacaggacggtttgtcttctccttggacacctctgtcagcacggcatatctgcagatcagcagcctaaaggctgaggacactgccgtgtattactgtgcgagagtcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 294 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3898 3897 M02948:184:000000000-JK6TB:1:1104:11794:8135_1:N: productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD5-24*01 ORF 2 8 8 16 8.8.16 [2.17.38.11] CARDWPERWLQLGPQDYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagattggcccgagagatggctacaattagggccccaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3899 3898 M02948:184:000000000-JK6TB:1:1104:13435:8901_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD2-2*01 F 2 8 8 15 8.8.15 [2.17.38.11] CAREGDCSSTSCHMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagagggggattgtagtagtaccagctgccatatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3900 3899 M02948:184:000000000-JK6TB:1:1104:14244:8966_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD1-26*01 F 3 8 8 8 8.8.8 [3.17.38.11] CASGNFPVYW in-frame + tgcagcctctggaatcccctttagtcgctatagcatgaactgggtccgtcaggctccagggaaggggctggagtgggtctcatccattactactagtagtacttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagtgggaacttccctgtctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3901 3900 M02948:184:000000000-JK6TB:1:1104:14115:8999_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD1-14*01 ORF 3 8 8 18 8.8.18 [2.17.38.11] CARGDPNPDYYYYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggagacccgaaccccgattattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3902 3901 M02948:184:000000000-JK6TB:1:1104:3656:9525_1:N:0 productive Homsap IGHV4-34*03 F (see comment) 1050 97.72 214/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-3*01 F 2 8 7 9 8.7.9 [3.17.38.11] AFWSGLDFDYW in-frame + 2nd-CYS 104 not identified: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtatattatgcattttggagtggtttagattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3903 3902 M02948:184:000000000-JK6TB:1:1104:25335:9745_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*02 F 2 8 8 13 8.8.13 [2.17.38.11] CARFRSYDTAYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagatttcggagctacgataccgcttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3904 3903 M02948:184:000000000-JK6TB:1:1104:27781:10226_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1069 92.34 229/248 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-3*01 F 2 8 8 12 8.8.12 [11.17.38.11] CAKGPFWTHAFDIW in-frame + atggggggtcccagagactcttctgtgcatcctctggattcaccttcaatgactactacatgagctggatccgccaggctccagggagggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccattcccagagacaattccaaggacactctttatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaagggacctttttggacccatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3905 3904 M02948:184:000000000-JK6TB:1:1104:8601:10813_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 238 94.34 50/53 nt Homsap IGHD3-22*01 F 2 8 7 22 8.7.22 [3.17.38.11] CARGLYYDSSGYVKDTENWYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggcctctactatgatagtagtggttatgtgaaagacacggaaaactggtacttcgatctctggggccgtggcaccctggtcaccgtctcctcagggagtgcatccgccctaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3906 3905 M02948:184:000000000-JK6TB:1:1104:26923:11396_1:N productive Homsap IGHV4-59*08 F 1091 99.55 219/220 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-18*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARVPWIQLWRFFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggctgtgtattactgtgcgagagtcccgtggatacagctatggcggttctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3907 3906 M02948:184:000000000-JK6TB:1:1104:11682:11624_1:N productive Homsap IGHV3-21*07 (F) 863 87.44 195/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKDIWRTAAGSPGDYW in-frame + tgcagcctctggattcatctttagtaactatgccctgaattgggtccgccaggctccagggaaggggctggaatgggtctcatttattagtcatgatggcacaatcacaatccacgcagactccgtgaagggccgattcaccatctccagagacaacgccaagaactccctgtatctgcaaatgaacagtctgagagctgaggacacggccttgtattactgtgcaaaagatatttggcgaacagcagctggttcccccggggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3908 3907 M02948:184:000000000-JK6TB:1:1104:7338:11910_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD1-26*01 F 1 8 8 20 8.8.20 [3.17.38.11] CARVGSTPRETYYYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagtgggaagtaccccaagagaaacatattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3909 3908 M02948:184:000000000-JK6TB:1:1104:23443:12440_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 866 94.30 182/193 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD3-22*01 F 2 1 8 16 1.8.16 [X.17.38.11] CAGYKYDSGGYSTYFDYW in-frame + tggcatgacctgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtagtagtggtggtagcacatactacgcagggtccgcgaagggccggttcaccatctccagagacaattccaagaacacggtgtatctgcaaatggatagcctgagagccgaggacacggccatatattactgtgcgggctataaatatgatagtggtggttactccacgtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 305 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3910 3909 M02948:184:000000000-JK6TB:1:1104:18362:12537_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1055 97.73 215/220 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD2-15*01 F 2 8 7 15 8.7.15 [3.17.38.11] CAREDCGGGSCYYLDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) cgctgtgtatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaaacaccaactacaacccgtccctcgagagtcgagtcaacatatcagtagacacgtccaagaaccagttctccctgaaggtgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagaggattgtggtggtggtagctgctactacctggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3911 3910 M02948:184:000000000-JK6TB:1:1104:4500:13083_1:N: productive Homsap IGHV1-18*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-10*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARALYGSGSYYNDFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcaacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcgttatatggttcggggagttattataacgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3912 3911 M02948:184:000000000-JK6TB:1:1104:21229:14407_1:N productive Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1105 97.83 225/230 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD6-13*01 F 3 10 9 13 10.9.13 [2.17.38.11] CARDRWVSGQAFDIW in-frame + ccgtctccggggacagtgtctctagcaacagtgctacgtggaactggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccaagtggtataatgattatgcagtatctgtgaagagtcgaataatcatcaacccagacacatccaagaaccagttctccctgcagctgaactctgtgactcccgaggacacggctgtgtattactgtgcaagagatcgttgggtatctgggcaggcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 364 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3913 3912 M02948:184:000000000-JK6TB:1:1104:10967:14676_1:N productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD3-3*01 F 3 8 8 14 8.8.14 [3.17.38.11] CARALGGVTTSDFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggaatgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagtcgaggacacggctgtttattactgtgcgagagcattaggcggggtaactacttcggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3914 3913 M02948:184:000000000-JK6TB:1:1104:19235:14762_1:N productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1056 97.30 216/222 nt 96.85 215/222 nt Homsap IGHJ2*01 F 256 98.11 52/53 nt Homsap IGHD6-13*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARRTAAAFWYFDLW in-frame + potentially, because of detected insertion/deletion in FR3-IMGT at codon 96 of V-REGION: 'ATC' (3 nucleotides at position 196 to 198 in the user submitted sequence), (do not cause frameshift); aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagtagtcaaaatATCccctcggacaccgccatgtattactgtgcgagacggacagcagctgccttctggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3915 3914 M02948:184:000000000-JK6TB:1:1104:24640:15151_1:N productive Homsap IGHV5-10-1*01 F, or Homsap IGHV5-10-1*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-12*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARQDIVATTEPYVDYW in-frame + aagggttctggatacagctttaccagctactggatcagctgggtgcgccagatgcccgggaaaggcctggagtggatggggaggattgatcctagtgactcttataccaactacagcccgtccttccaaggccacgtcaccatctcagctgacaagtccatcagcactgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaggatatagtggctacgacagagccttatgttgactactggggccagggaaccctggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3916 3915 M02948:184:000000000-JK6TB:1:1104:13309:15307_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARVAVAGYFDYW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagttgctgtggcgggctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3917 3916 M02948:184:000000000-JK6TB:1:1104:12986:15317_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD6-19*01 F 2 8 8 18 8.8.18 [3.17.38.11] CAKDQRVGIVVVHSNAFNIW in-frame + tgcagtctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatcagcgggttgggatagtagtggtccacagtaatgcttttaatatctggggccaagggacaatggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3918 3917 M02948:184:000000000-JK6TB:1:1104:17273:15366_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-2*01 F 2 8 7 9 8.7.9 [3.17.38.11] CARYRRTFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgcgctatagacgtacctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3919 3918 M02948:184:000000000-JK6TB:1:1104:17824:15428_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD4-23*01 ORF 1 8 8 9 8.8.9 [2.17.38.11] CARGWELGDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagggtgggaacttggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3920 3919 M02948:184:000000000-JK6TB:1:1104:16478:15731_1:N productive Homsap IGHV1-24*01 F 908 89.69 200/223 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-22*01 F 2 8 8 13 8.8.13 [3.17.38.11] CATSYDSSGDGFDPW in-frame + tgcagcctctggattctcctttagcagctatgccatgagctgggtccgccaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaactagctatgatagtagtggtgacgggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3921 3920 M02948:184:000000000-JK6TB:1:1104:7610:15783_1:N: unproductive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 166 86.36 38/44 nt Homsap IGHD2-21*01 F 2 8 8 X 8.8.X [3.17.38.11] CAKAS#YW out-of-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtctcaggtattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagcgagtggtactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3922 3921 M02948:184:000000000-JK6TB:1:1104:12037:16146_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ6*04 F 172 85.11 40/47 nt Homsap IGHD1-26*01 F 2 8 8 7 8.8.7 [3.17.38.11] CARDVEPVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatgtagagcccgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3923 3922 M02948:184:000000000-JK6TB:1:1104:15802:16301_1:N productive Homsap IGHV3-7*03 F 935 91.03 203/223 nt Homsap IGHJ3*01 F 151 78.00 39/50 nt Homsap IGHD3-9*01 F 2 8 8 7 8.8.7 [3.17.38.11] CLKDYQGDW in-frame + tgtagcgtctggattcccctttaatctctattggatgagttgggtccgccaggctccagggaaggggctggagtggctggccaacataaagggagatggaacagaagaaaactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactatatttgcaaatgagcagcctgagagccgaagacacggccgtctattactgtttgaaggattaccagggggactggggccaagggacagtggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 339 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3924 3923 M02948:184:000000000-JK6TB:1:1104:4343:16823_1:N: productive Homsap IGHV1-18*01 F 1041 97.26 213/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD7-27*01 F 1 8 8 10 8.8.10 [2.17.38.11] CARARTGDADYW in-frame + gcctctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatggggtggatccgcacttacaatggtaacacaaactatatacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagctagaactggggatgcagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3925 3924 M02948:184:000000000-JK6TB:1:1104:16747:17174_1:N productive (see comment) Homsap IGHV3-7*01 F 998 94.17 210/223 nt 93.72 209/223 nt Homsap IGHJ6*02 F 220 83.87 52/62 nt Homsap IGHD6-13*01 F 2 8 8 18 8.8.18 [3.17.38.11] CARDRSAAAAGTFKYGMDVW in-frame + potentially, because of detected insertion/deletion in CDR1-IMGT at codon 37 of V-REGION: 'AAC' (3 nucleotides at position 29 to 31 in the user submitted sequence), (do not cause frameshift); tgcagcctctgggttcaccgtcagtagcAACtatctgatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaaccaagatggaagtgagaaaaactatgtggactctgcgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagataggtccgccgcagcagctggtactttcaagtacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3926 3925 M02948:184:000000000-JK6TB:1:1104:22056:17211_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD3-9*01 F 1 8 7 11 8.7.11 [3.17.38.11] CARAAARSYFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcggctgcccggtcctactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3927 3926 M02948:184:000000000-JK6TB:1:1104:6204:17215_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1091 99.55 219/220 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-10*01 F 3 8 7 21 8.7.21 [3.17.38.11] CARGITMVRGVIINHYYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgtgtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagggattactatggttcggggagttattataaaccactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3928 3927 M02948:184:000000000-JK6TB:1:1104:16333:17279_1:N productive Homsap IGHV1-18*01 F 1023 96.35 211/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-18*01 F 1 8 8 14 8.8.14 [2.17.38.11] CARGLVDTAMDDLDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgaggccacggccgtgtattactgtgcgagaggactcgtggatacagctatggacgaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3929 3928 M02948:184:000000000-JK6TB:1:1104:27922:17742_1:N productive Homsap IGHV4-59*12 (F) 1082 99.09 218/220 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD6-19*01 F 3 8 7 16 8.7.16 [3.17.38.11] CARGQVWQWLVRSWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccaagtgtggcagtggctggtacggtcctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3930 3929 M02948:184:000000000-JK6TB:1:1104:8603:17761_1:N: productive Homsap IGHV4-61*08 F 1103 98.67 223/226 nt Homsap IGHJ6*03 F (see comment) 256 90.32 56/62 nt Homsap IGHD2-21*01 F 1 10 7 16 10.7.16 [3.17.38.11] CARTAGSSLWYYYYVDVW in-frame + other possibilities: Homsap IGHJ6*04 (highest number of consecutive identical nucleotides) cactgtctctggtggctccgtcagcaggggtggttactactggaactggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgaatcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaaccgccggtagtagtttgtggtactactactacgtggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3931 3930 M02948:184:000000000-JK6TB:1:1104:22063:17906_1:N No rearrangement found Homsap IGHV3-23*01 F, or Homsap IGHV3-23*02 F or Homsap IGHV3-23*04 F or Homsap IGHV3-23*05 F or Homsap IGHV3-23D*01 F (see comment) 105 49.77 109/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found, stop codons low V-REGION score: this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggttcccggccggatattgtagtggtggtagctgctgaacgtattactatgatagtagtggttattactacgttctactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 255 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3932 3931 M02948:184:000000000-JK6TB:1:1104:6382:17995_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-1*01 F 1 8 8 13 8.8.13 [3.17.38.11] CAVGPTTTHYYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcggtcggtcctacaacgacccattactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgtcccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3933 3932 M02948:184:000000000-JK6TB:1:1104:14390:18081_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F or Homsap IGHV4-34*08 F 633 91.33 137/150 nt Homsap IGHJ4*02 F (see comment) 204 91.67 44/48 nt Homsap IGHD4-17*01 F 2 X 7 15 X.7.15 [X.5.38.11] CARGRGDYGDYYRFDYW in-frame + other possibilities: Homsap IGHJ4*03 (highest number of consecutive identical nucleotides) atatcgcgaggggaaatcaatcatagtggaaccaccacctacaacccgtccctcacgagtcgagtcaccatttcagtagacacgtccaagaaccagttctccctgaaattgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccgaggtgactacggtgactactatcgctttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 259 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3934 3933 M02948:184:000000000-JK6TB:1:1104:10850:18299_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 1 8 8 22 8.8.22 [2.17.38.11] CASTVRWEYQLLTGFNYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcacggtcaggtgggagtaccagctgctaacgggttttaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3935 3934 M02948:184:000000000-JK6TB:1:1104:23255:18807_1:N productive Homsap IGHV3-7*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-12*01 F 1 8 8 18 8.8.18 [3.17.38.11] CARDPVDIVATTAPPIFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagatcccgtggatatagtggctacgaccgctcccccgatttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaacccccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3936 3935 M02948:184:000000000-JK6TB:1:1104:20299:18930_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD2-15*01 F 2 8 8 15 8.8.15 [3.17.38.11] CARQEGAGSWSGYSDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacaacccgtccttccaaggccaagtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaagagggggcagggagttggagtggttacagtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3937 3936 M02948:184:000000000-JK6TB:1:1104:12117:18975_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-2*01 F 3 8 8 14 8.8.14 [2.17.38.11] CARASVPAAFNWFDPW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggcctctgtaccagctgcttttaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3938 3937 M02948:184:000000000-JK6TB:1:1104:4729:19123_1:N: productive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1073 98.64 217/220 nt 98.18 216/220 nt Homsap IGHJ6*04 F (see comment) 144 69.84 44/63 nt Homsap IGHD5-24*01 ORF 1 8 8 12 8.8.12 [3.16.38.11] CARLEMATTVPDVW in-frame + potentially, because of detected insertion/deletion other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) in FR2-IMGT, from codon 50 of V-REGION: 2 nucleotides (from position 67 in the user submitted sequence), (cause frameshift) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcggtgctgatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactggagatggctacaaccgttcccgacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3939 3938 M02948:184:000000000-JK6TB:1:1104:27313:19241_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD5-24*01 ORF 2 8 8 11 8.8.11 [3.17.38.11] CAKISRELQFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaataagtagagagctacaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3940 3939 M02948:184:000000000-JK6TB:1:1104:12760:21139_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1097 99.10 221/223 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARGDYCTSTSCPYPYYFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagaggggattattgtactagtaccagctgcccatatccctactactttgactactggggccaggggaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3941 3940 M02948:184:000000000-JK6TB:1:1104:13601:23714_1:N productive Homsap IGHV3-53*05 (F), or Homsap IGHV3-66*02 F or Homsap IGHV3-66*03 F 1064 98.18 216/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARASGWQWLLVDYW in-frame + tgcagcctctgggttcaccgtcagtagcaactacatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagttatttatagcggtggtagcacatactatgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagaactgaggacacggctgtgtattactgtgcgagggcgtcggggtggcagtggctcttagttgactactggggccagggaaccctggtcaccgtctcctctgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3942 3941 M02948:184:000000000-JK6TB:1:1103:7701:2945_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1043 96.41 215/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-15*01 F 2 8 8 17 8.8.17 [3.17.38.11] CAKDESSISSWTPNWFDPW in-frame + tgcagcctctggattcacctttagcagctatggcatgagctgggtccgccaggctccagggaaggggctagagtgggtctcagctattagtaatagtggtggtagcacatactacgcagactccgtgaagggccggttcaccgtctccagagacaattccaagaacacgctgtatttgcaaatgaacagcctgagagccgaggacacggccgcatattactgcgcgaaagacgagtccagtattagtagctggaccccaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3943 3942 M02948:184:000000000-JK6TB:1:1103:6581:3014_1:N:0 productive Homsap IGHV4-39*07 F, or Homsap IGHV4-39*09 (F) 1013 94.25 213/226 nt Homsap IGHJ4*02 F (see comment) 195 89.58 43/48 nt Homsap IGHD5-24*01 ORF 3 10 7 13 10.7.13 [3.17.38.11] CARDGRPDGSIFDSW in-frame + other possibilities: Homsap IGHJ5*02 (highest number of consecutive identical nucleotides) cactgtctctggtggctccatcagcagtagtagttactactggggctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcacctactacaacccgtccctcaacagtcgagtcaccatatctgtagacacgtccaagaaccagttctccctgaaagtgaactctgtgatcgctgcggacacggccgtgtattactgtgcgagagatggaagaccagatggatccatttttgactcctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3944 3943 M02948:184:000000000-JK6TB:1:1103:24460:3375_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 166 86.36 38/44 nt Homsap IGHD6-25*01 F 3 8 7 5 8.7.5 [3.17.38.11] CASQWIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagtcagtggatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 330 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3945 3944 M02948:184:000000000-JK6TB:1:1103:23329:4512_1:N: productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-24*01 ORF 3 8 8 12 8.8.12 [2.17.38.11] CAPGTGYNPNLDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacaaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgccccggggacgggctacaatcccaaccttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3946 3945 M02948:184:000000000-JK6TB:1:1103:20447:4746_1:N: productive Homsap IGHV1-8*01 F 1095 100.00 219/219 nt Homsap IGHJ6*02 F 310 100.00 62/62 nt Homsap IGHD6-13*01 F 2 8 8 18 8.8.18 [2.17.38.11] CARRAAAGLNYYYYYGMDVW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaagagcagcagctggtcttaattactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3947 3946 M02948:184:000000000-JK6TB:1:1103:11876:7097_1:N: unproductive Homsap IGHV3-13*01 F 929 91.36 201/220 nt Homsap IGHJ5*02 F 141 84.62 33/39 nt 8 7 X 8.7.X [3.17.38.11] CASRS# out-of-frame + TRP 118 not identified tgcagcctctggattcatcctcagtaactacgacatgcactgggtccgccaagttacaggaaaaggtctggagtgggtctcaattatgggtactgctggtgacacatactatccaggttccgtgaagggccgattcaccatctccagggacagcgccaagaacactctgtatctgcaaatgaacagtctgagagccgaggacacggccgtgtattactgtgcgagccgcagtgggtcagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 325 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3948 3947 M02948:184:000000000-JK6TB:1:1103:3557:8037_1:N:0 productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 8 13 8.8.13 [3.17.38.11] CAAVDSSGWYEFDYW in-frame + tgcagcctctggattcacctttagcagctacgcaatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccgcttaaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcggcagtggatagcagtggctggtacgaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3949 3948 M02948:184:000000000-JK6TB:1:1103:25731:8479_1:N: productive Homsap IGHV2-5*02 F 1245 100.00 249/249 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD3-22*01 F 3 10 7 15 10.7.15 [11.17.38.11] CAHSSMIVVVRYAFDIW in-frame + acacagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggatccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgcacacagtagcatgatagtagtggttaggtatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctctgctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3950 3949 M02948:184:000000000-JK6TB:1:1103:22957:8675_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-15*01 F 2 8 8 8 8.8.8 [2.17.38.11] CARGGSSPYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagggggtagtagtccctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 338 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3951 3950 M02948:184:000000000-JK6TB:1:1103:28453:9803_1:N: productive (see comment) Homsap IGHV4-59*01 F, or Homsap IGHV4-59*03 F or Homsap IGHV4-59*07 F 675 100.00 135/135 nt 99.26 134/135 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD4-17*01 F 2 8 0 18 8.0.18 [3.17.16.11] CARGPFYGDYESYYYGMDVW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT, from codon 56 of V-REGION: 85 nucleotides (from position 88 in the user submitted sequence), (cause frameshift) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggacctttctacggtgactacgagtcctactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 284 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3952 3951 M02948:184:000000000-JK6TB:1:1103:7648:10587_1:N: productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD3-22*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARGRVYYDSSGYYYDEHWYFDLW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaggcagggtttactatgatagtagtggttattactacgacgaacactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 384 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3953 3952 M02948:184:000000000-JK6TB:1:1103:21851:11152_1:N productive Homsap IGHV4-59*12 (F) 1073 98.64 217/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARYSDSSGYIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaacttgagctctgtgaccgccgcggacacggctgtgtattactgtgcgaggtactctgatagtagtggttatattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3954 3953 M02948:184:000000000-JK6TB:1:1103:15762:11229_1:N productive Homsap IGHV3-64*04 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD2-21*02 F 3 8 8 16 8.8.16 [3.17.38.11] CAKSPPRRLEVTTEFDYW in-frame + ttcagcctctggattcaccttcagtagctatgctatgcactgggtccgccaggctccagggaagggactggaatatgtttcagctattagtagtaatgggggtagcacatactacgcagactccgtgaagggcagattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaatccccgccgcgccgattggaggtgactaccgagtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3955 3954 M02948:184:000000000-JK6TB:1:1103:7569:11292_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 132 75.00 36/48 nt Homsap IGHD3-22*01 F 3 8 8 9 8.8.9 [3.17.38.11] CAKDSPILTKL in-frame + TRP 118 not identified ttcagcctctggattcacctttagcagctatgccatgagctgggcccgccaggctccagggaaggggctggagtgggtctcagttattagtgttagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccatatattactgtgcgaaagatagcccgattttgactaagttgggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3956 3955 M02948:184:000000000-JK6TB:1:1103:14952:11652_1:N productive Homsap IGHV3-30*04 F, or Homsap IGHV3-30-3*03 F 1061 97.31 217/223 nt Homsap IGHJ4*02 F 174 90.48 38/42 nt Homsap IGHD7-27*01 F 3 8 8 5 8.8.5 [3.17.38.11] CATGGYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtggcagttatatcatatgatggaagtaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgacagggggctattggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 333 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3957 3956 M02948:184:000000000-JK6TB:1:1103:19184:11875_1:N No rearrangement found Homsap IGHV4-59*08 F, or Homsap IGHV4-59*12 (F) or Homsap IGHV4-61*05 F (see comment) 587 74.09 163/220 nt 8 7 X 8.7.X [3.17.38.X] + no rearrangement found low V-REGION identity (74.09%): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcacctgtgcgagagtcgatcgtagtggttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 267 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3958 3957 M02948:184:000000000-JK6TB:1:1103:16618:12857_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1020 95.50 212/222 nt Homsap IGHJ4*02 F 167 84.78 39/46 nt Homsap IGHD6-19*01 F 2 8 8 6 8.8.6 [3.17.38.11] CVRGAGYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgatgccagatatagcccgtccttccaaggccaggtcaccatatcagtcgacaactccctgtccaccgcctacctgcagtggaccagcctgaaggcctcggacaccgccatgtattactgtgtgagaggggctggatactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 335 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3959 3958 M02948:184:000000000-JK6TB:1:1103:16134:14246_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 960 93.15 204/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARGHSSGWSTYPQNFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggccatagcagtggctggtccacgtaccctcagaactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3960 3959 M02948:184:000000000-JK6TB:1:1103:10258:14289_1:N productive Homsap IGHV4-61*01 F 1130 100.00 226/226 nt Homsap IGHJ6*02 F, or Homsap IGHJ6*03 F 202 80.65 50/62 nt Homsap IGHD1-14*01 ORF 1 10 7 16 10.7.16 [3.17.38.11] CARGRSSTGKYKYYMDVW in-frame + cactgtctctggtggctccgtcagcagtggtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagaggccggagtagtaccggaaagtacaaatattatatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3961 3960 M02948:184:000000000-JK6TB:1:1103:17999:14577_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 214 92.00 46/50 nt Homsap IGHD3-22*01 F 2 8 7 16 8.7.16 [3.17.38.11] CASQRYFSDSSGSAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagccaacgctatttctctgatagtagtggtagtgcttttgatatctggggccaggggacaacggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3962 3961 M02948:184:000000000-JK6TB:1:1103:4702:14858_1:N: productive Homsap IGHV1-2*02 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-24*01 ORF 3 8 8 14 8.8.14 [2.17.38.11] CARDGGWNGYNLPDYW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagagatgggggctggaatggctacaatctccctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3963 3962 M02948:184:000000000-JK6TB:1:1103:14655:15253_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 15 8.8.15 [3.17.38.11] CAKDSDSSGYYLTFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagattctgatagtagtggttattacttgacctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3964 3963 M02948:184:000000000-JK6TB:1:1103:25703:16911_1:N productive Homsap IGHV4-34*03 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-13*01 F 2 8 7 17 8.7.17 [3.17.38.11] CTKVNGRRAVTGTGCSDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgaggacacggccgtgcattactgtacgaaagttaacgggcgaagagcagtaactggtacggggtgttctgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3965 3964 M02948:184:000000000-JK6TB:1:1103:20947:16941_1:N productive Homsap IGHV4-31*02 F, or Homsap IGHV4-31*03 F or Homsap IGHV4-31*04 F or Homsap IGHV4-31*11 (F) 835 100.00 167/167 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 X 7 21 X.7.21 [X.10.38.11] CARDRRWECSGGSCYGGSGFDYW in-frame + acccagggaagggcctggagtggattgggtacatctattacagtgggagcacctactacaacccgtccctcaagagtcgagttaccatatcagtagacacgtctaagaaccagttctccctgaagctgagctctgtgactgccgcggacacggccgtgtattactgtgcgagagatcgtagatgggagtgtagtggtggtagctgctacggggggtctgggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 294 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3966 3965 M02948:184:000000000-JK6TB:1:1103:3616:17194_1:N: No rearrangement found Homsap IGHV1-18*01 F 1086 99.54 218/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaaggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagaggacaaggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 294 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3967 3966 M02948:184:000000000-JK6TB:1:1103:27452:17317_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-10*01 F 3 8 8 18 8.8.18 [3.17.38.11] CARAITMVRGVIVDSWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagggccattactatggttcggggagttatagtggactcctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3968 3967 M02948:184:000000000-JK6TB:1:1103:14686:17597_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-2*01 F 2 8 8 19 8.8.19 [3.17.38.11] CATTRRYCSSTSCPADAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaccactcggagatattgtagtagtaccagctgcccagctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3969 3968 M02948:184:000000000-JK6TB:1:1103:8540:17728_1:N: productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-14*01 ORF 3 8 8 12 8.8.12 [3.17.38.11] CARPRKQSRDFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgacgacacggctgtttattactgtgcgagaccccggaagcagtcgagggactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3970 3969 M02948:184:000000000-JK6TB:1:1103:28795:17913_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD6-6*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARVAAHGKYYYMDVW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagtagcagctcacggcaagtactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3971 3970 M02948:184:000000000-JK6TB:1:1103:3921:17951_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1095 100.00 219/219 nt Homsap IGHJ1*01 F (see comment) 152 76.92 40/52 nt Homsap IGHD4-11*01 ORF 2 8 8 13 8.8.13 [2.17.38.11] CAGERDHITRPHIHW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgggagagagggaccacattactaggccccacatccactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3972 3971 M02948:184:000000000-JK6TB:1:1103:2896:18373_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-13*01 F 1 8 8 20 8.8.20 [2.17.38.11] CASRLAQTLYSSSWYQGSFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtagacttgctcaaaccttgtatagcagcagctggtaccaaggttcttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3973 3972 M02948:184:000000000-JK6TB:1:1103:27765:18469_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD3-22*01 F 2 8 8 14 8.8.14 [3.17.38.11] CARHFSYDSSGRFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatttttcgtatgatagtagcggacggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3974 3973 M02948:184:000000000-JK6TB:1:1103:26256:18634_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARLGAEGSGWYFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttggcgcggaaggcagtggctggtactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3975 3974 M02948:184:000000000-JK6TB:1:1103:5433:18827_1:N: No rearrangement found Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1023 96.35 211/219 nt 8 8 X 8.8.X [2.17.38.X] + no rearrangement found gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacatggctgtgtattactgtgcgagagactgacatccccatgctgcgggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 307 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3976 3975 M02948:184:000000000-JK6TB:1:1103:10329:19156_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARAVAGNSVDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcagtggctggtaattcggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3977 3976 M02948:184:000000000-JK6TB:1:1103:27800:19331_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 993 98.53 201/204 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD2-2*01 F 2 5 8 14 5.8.14 [X.17.38.11] CAVAYCSNTTCYFDYW in-frame + tttaccacttactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccatccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcggtcgcctattgtagtaataccacctgctattttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 310 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3978 3977 M02948:184:000000000-JK6TB:1:1103:13231:19959_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1106 99.55 222/223 nt Homsap IGHJ2*01 F 220 90.57 48/53 nt Homsap IGHD3-3*01 F 2 8 8 16 8.8.16 [3.17.38.11] CAKDLSDFWSGIRYFDLW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatactactgtgcgaaagatttgagcgatttttggagtgggataaggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3979 3978 M02948:184:000000000-JK6TB:1:1103:4496:20156_1:N: productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1079 98.21 219/223 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD6-6*01 F 1 8 8 11 8.8.11 [3.17.38.11] CAGSSPGGGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) tgcagcctctggattcacctttagcagctatgccatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgggcagctccccaggaggtggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccctttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3980 3979 M02948:184:000000000-JK6TB:1:1103:7012:21713_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F (see comment) 220 83.87 52/62 nt Homsap IGHD5-18*01 F 3 8 8 20 8.8.20 [3.17.38.11] CARHDVRYSYGYPELDDGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgacgtaagatacagctatggttatcccgagctagatgacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3981 3980 M02948:184:000000000-JK6TB:1:1103:7970:21721_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-14*01 ORF 1 8 8 15 8.8.15 [3.17.38.11] CARALITGTTYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgagagccctcataactggaaccacctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3982 3981 M02948:184:000000000-JK6TB:1:1103:20113:22088_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD7-27*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARHVTELGEFDYW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacacgtgaccgaactgggcgaatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3983 3982 M02948:184:000000000-JK6TB:1:1103:5708:22110_1:N: productive Homsap IGHV3-13*05 F 1001 95.00 209/220 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD6-6*01 F 3 8 7 17 8.7.17 [3.17.38.11] CARAIRLWLPHYYYYMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattggtactgctggtgacccatactatccaggctccgtgaagggccgattcaccatctccagagaaaatgccaagaactccttgtatcttcaaatgaacagcctgagagccggggacacggctgtgtattactgtgcaagagccatcagactatggctgcctcactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3984 3983 M02948:184:000000000-JK6TB:1:1103:21110:22412_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD5-18*01 F 3 8 7 19 8.7.19 [3.17.38.11] CARARPLGPQTGNSRNWFDPW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcccgcccattgggtccccagactggcaacagccgcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3985 3984 M02948:184:000000000-JK6TB:1:1103:18379:22420_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ6*02 F 247 88.71 55/62 nt Homsap IGHD2-8*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARDNGGSYGLVYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagataacggtgggagctatgggttggtctactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3986 3985 M02948:184:000000000-JK6TB:1:1103:25509:23095_1:N productive Homsap IGHV3-7*03 F 1065 100.00 213/213 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*02 F 1 8 8 11 8.8.11 [X.17.38.11] CLRWAMDLAFDYW in-frame + ggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtcttaggtgggctatggacttagcttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 310 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3987 3986 M02948:184:000000000-JK6TB:1:1103:19210:23225_1:N productive Homsap IGHV4-59*04 F 1028 96.36 212/220 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD6-19*01 F 1 8 7 18 8.7.18 [3.17.38.11] CARDAADYSSGWYDDHFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattggggaaatccatcatagtgggagcacctactacaacccgtccctcaagagtcgaatcaccatgtccgtagacacgtccaagaaccagttctacctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagatgccgccgattatagcagtggctggtatgatgaccactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccctttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3988 3987 M02948:184:000000000-JK6TB:1:1103:15925:23505_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD3-10*01 F 2 8 8 27 8.8.27 [3.17.38.11] CARHIRENYYGSGSYYTPEDYYYYGMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatatacgggagaattactatggttcggggagttattatacgccggaagactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 398 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3989 3988 M02948:184:000000000-JK6TB:1:1118:18808:2564_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1068 98.63 216/219 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD5-18*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARGGLIQPYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagggtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggaggcctaatacagccctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatttccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3990 3989 M02948:184:000000000-JK6TB:1:1118:22871:2833_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1070 97.76 218/223 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 3 8 8 16 8.8.16 [3.17.38.11] CAKDMRVGATPPDPFDIW in-frame + tgcagcctctgtattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcaacaattagtggtagtggtgatagcacagactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagatatgcgggtgggagctactccccctgatccttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3991 3990 M02948:184:000000000-JK6TB:1:1118:12729:3477_1:N: productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-25*01 F 1 8 8 12 8.8.12 [2.17.38.11] CARVPYSSGYKDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagttccgtatagcagtggctacaaagactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3992 3991 M02948:184:000000000-JK6TB:1:1118:22456:3497_1:N: productive Homsap IGHV1-8*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD2-15*01 F 2 8 8 13 8.8.13 [2.17.38.11] CARGLGSGARSVSYW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccgtaagcacagcctacatggagctgagtagcctgagatctgaggacacggccttgtattactgtgcgagaggcctgggcagtggtgctaggtccgtgtcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3993 3992 M02948:184:000000000-JK6TB:1:1118:14843:4341_1:N: productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1077 99.09 217/219 nt Homsap IGHJ6*02 F 292 96.77 60/62 nt Homsap IGHD1-26*01 F 1 8 8 18 8.8.18 [2.17.38.11] CATGDIVGATYYYYYGMDVW in-frame + gcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgaacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacgggcgatatagtgggagctacgtactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3994 3993 M02948:184:000000000-JK6TB:1:1118:8511:4695_1:N:0 productive Homsap IGHV1-3*01 F, or Homsap IGHV1-3*04 (F) or Homsap IGHV1-3*05 F 1005 95.43 209/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD5-24*01 ORF 1 8 8 16 8.8.16 [2.17.38.11] CARDHVEMATIWDAFDIW in-frame + gcttctggatacatcttcactagctatgctatgcattgggtgcgccaggcccccggacaaagtcttgagtggatgggctggatcaactgtggcaatggtaacacatactattcacagaaattccagcgcagagtcaccattaccagggacacatccgcgagcacagcctacatggaactgagcagcctgagatctgaagacacggctgtgtattactgtgcgagagatcacgtagagatggctacaatttgggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3995 3994 M02948:184:000000000-JK6TB:1:1118:25651:4999_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1010 95.45 210/220 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD3-10*01 F 2 8 7 12 8.7.12 [3.17.38.11] CVRGYASGSYWSHW in-frame + cactgtctatggtgggtccttcaataattactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcacagtggagacatcaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaagcagttctccctgaagctgagctctgtgaccgccgcggacacggctgtatattactgtgtgagggggtatgcttcggggagttattggtctcactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3996 3995 M02948:184:000000000-JK6TB:1:1118:20906:5603_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD4-17*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARHVGGGVGYGDYLDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatgtggggggcggcgtagggtacggtgactacctagatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3997 3996 M02948:184:000000000-JK6TB:1:1118:11176:7363_1:N: unproductive (see comment) Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 920 85.83 212/247 nt 85.43 211/247 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD6-6*01 F 3 8 8 15 8.8.15 [11.17.38.11] CAKGARQLVSDNWFDPW in-frame + rearranged sequence, stop codons in FR1-IMGT, from codon 19 of V-REGION: 1 nucleotides (from position 13 in the user submitted sequence), (cause frameshift) ctggggggtcccgtaaccttccctttccgcccccggaatccccttttatagttattgggttgacctgggtcgccaggcccccgggaaggggctggagtgggtctcaggtattagtggtagtggtggtaacacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtctattactgtgcgaaaggggcccggcagctcgttagcgacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3998 3997 M02948:184:000000000-JK6TB:1:1118:13688:7468_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-22*01 F 2 8 8 16 8.8.16 [3.17.38.11] CARLWGYYYDSSGYCDYW in-frame + aagggttctggatatagttttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagattgtgggggtattactatgatagtagtggttattgtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
3999 3998 M02948:184:000000000-JK6TB:1:1118:18509:7534_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 794 94.86 166/175 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD6-13*01 F 2 X 8 19 X.8.19 [X.12.38.11] CARQGIAAAGGPYYYYGMDVW in-frame + atatcgcgaggggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacaggggatagcagcagctggtgggccctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 296 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4000 3999 M02948:184:000000000-JK6TB:1:1118:4191:7613_1:N:0 productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD5-18*01 F 3 8 7 15 8.7.15 [3.17.38.11] CARGRRYSYGWGHFDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagaggccggaggtacagctatggttgggggcactttgactactggggccagggaactctggtcaccgtctcctcaaggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4001 4000 M02948:184:000000000-JK6TB:1:1118:14655:8019_1:N: productive Homsap IGHV3-9*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 141 77.08 37/48 nt Homsap IGHD1-26*01 F 1 8 8 10 8.8.10 [3.17.38.11] CARGRIVGANDW in-frame + tgcagcctctggattcacctttgatgattatgccatgcactgggtccggcaagctccagggaagggcctggagtgggtctcaggtattagttggaatagtggtagcataggctatgcggactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtgtattactgtgcaagaggccgtatagtgggagccaatgactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4002 4001 M02948:184:000000000-JK6TB:1:1118:11366:9306_1:N: productive Homsap IGHV3-48*03 F 1034 95.96 214/223 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD2-15*01 F 1 8 8 14 8.8.14 [3.17.38.11] CARSQLPLIGDWFDPW in-frame + tgcagcctctggattcagcttcagtagttgtgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtggtaccaaatattacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgctaatgagcggcctgagagtcgaggacacggctgtttattactgtgcgagatcccagctcccactcatcggcgactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4003 4002 M02948:184:000000000-JK6TB:1:1118:8606:9634_1:N:0 productive Homsap IGHV1-8*02 F 978 94.06 206/219 nt Homsap IGHJ4*03 F 132 75.00 36/48 nt Homsap IGHD5-12*01 F 1 8 8 11 8.8.11 [2.17.38.11] CARGSITIFGVSW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagggagtattacgatttttggagtgtcctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtcacctgtgagaatgcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4004 4003 M02948:184:000000000-JK6TB:1:1118:2577:9930_1:N:0 productive Homsap IGHV1-8*01 F 1184 98.36 240/244 nt Homsap IGHJ6*02 F 274 93.55 58/62 nt Homsap IGHD3-16*01 F 3 8 8 17 8.8.17 [10.17.38.11] CARGLGALPIYYYYGMDVW in-frame + aggctcggtgaaggtctcctgcagggcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggcctcggcgcgctgcccatctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4005 4004 M02948:184:000000000-JK6TB:1:1118:15522:11942_1:N productive Homsap IGHV1-2*02 F 996 94.98 208/219 nt Homsap IGHJ4*02 F 159 81.25 39/48 nt Homsap IGHD2-8*02 F 2 8 8 9 8.8.9 [2.17.38.11] CARTTGGIDQW in-frame + acttctggatacacgttcaccggctactatatgaactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagccctaacaatggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagttgagtggactgtcatctgacgacacggccgtgtattactgtgcgagaactactggtggtatagaccagtggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4006 4005 M02948:184:000000000-JK6TB:1:1118:6424:12774_1:N: productive Homsap IGHV4-59*08 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 229 92.45 49/53 nt Homsap IGHD1-26*01 F 1 8 7 13 8.7.13 [3.17.38.11] CARDPGATKRYFDLW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgagagatccgggagctactaagcggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4007 4006 M02948:184:000000000-JK6TB:1:1118:26198:12924_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD2-15*01 F 2 8 8 21 8.8.21 [2.17.38.11] CAMGCSGGSCYSGIDSIYAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagccacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgatgggttgtagtggtggtagctgctactcaggcatagactctatctatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4008 4007 M02948:184:000000000-JK6TB:1:1118:14286:13974_1:N unproductive (see comment) Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-19*01 F 2 8 8 X 8.8.X [2.17.38.11] CARMNEYSSGWYLSCH#DYW out-of-frame + rearranged sequence, stop codons tcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggatgaatgagtatagcagtggctggtacttaagctgccactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4009 4008 M02948:184:000000000-JK6TB:1:1118:23258:14184_1:N productive Homsap IGHV4-59*12 (F) 1073 98.64 217/220 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD6-19*01 F 1 8 7 13 8.7.13 [3.17.38.11] CAREEYSSGVIIDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgagagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagaggagtatagcagtggcgttattatcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatttccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4010 4009 M02948:184:000000000-JK6TB:1:1118:21196:15454_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt Homsap IGHJ3*02 F 232 96.00 48/50 nt Homsap IGHD5-12*01 F 1 8 8 12 8.8.12 [3.17.38.11] CARLAVDTEAFDIW in-frame + aagggttctggatacagctttaccaactattggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatgtatcccggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcgcagtggatacggaagcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4011 4010 M02948:184:000000000-JK6TB:1:1118:16533:18518_1:N productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 995 89.75 219/244 nt Homsap IGHJ6*03 F 301 98.39 61/62 nt Homsap IGHD1-14*01 ORF 3 8 8 15 8.8.15 [10.17.38.11] CARHQGNYYYYYYMDVW in-frame + aggctcggagaaagtctcctgcaaggcatctggatacaccttcaccagctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggaataatcaaccctagtggtggtagcacaagctacgcacagaagttccagggcagagtcaccatgaccacagacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacatcaaggtaactactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4012 4011 M02948:184:000000000-JK6TB:1:1118:25215:18929_1:N productive Homsap IGHV1-3*02 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD6-19*01 F 3 8 8 12 8.8.12 [2.17.38.11] CARDEQWQRGFDYW in-frame + gcttctggatacaccttcactagctatgctatgcattgggtgcgccaggcccccggacaaaggcttgagtggatgggatggagcaacgctggcaatggtaacacaaaatattcacaggagttccagggcagagtcaccattaccagggacacatccgcgagcacagcctacatggagctgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatgagcagtggcagcgcggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4013 4012 M02948:184:000000000-JK6TB:1:1118:17153:19121_1:N productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ6*03 F (see comment) 202 80.65 50/62 nt Homsap IGHD2-2*01 F 2 8 8 12 8.8.12 [3.17.38.11] CASCSRRAYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 and Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagttgtagtaggagggcctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4014 4013 M02948:184:000000000-JK6TB:1:1118:18617:20070_1:N unproductive (see comment) Homsap IGHV5-51*01 F 1010 89.88 222/247 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 2 8 8 22 8.8.22 [11.17.38.11] CARTRRLGYCSGGNCYLGDAFDIW in-frame + rearranged sequence, stop codons cggagggtgtgtgtagagattggagaacagacgtgggcacagccttactagctactggattagctgggtgcgccagatgcccgggaaaggcctggagtggatggtgatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatcccagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggacacgtcgtctaggatattgtagtggtggtaactgctacttaggggatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccc 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4015 4014 M02948:184:000000000-JK6TB:1:1118:23396:22032_1:N productive (see comment) Homsap IGHV6-1*01 F, or Homsap IGHV6-1*02 F 1078 96.52 222/230 nt 96.09 221/230 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD5-12*01 F 2 10 9 13 10.9.13 [2.17.38.11] CAREWLRTSYFFDYW in-frame + potentially, because of detected insertion/deletion in CDR2-IMGT at codon 62 of V-REGION: 'AAC' (3 nucleotides at position 105 to 107 in the user submitted sequence), (do not cause frameshift); ccatctccggggacagtgtctctaacaacaatgttgcttggagctggatcaggcagtccccatcgagaggccttgagtggctgggaaggacatactacaggtccAACaagtggtataatgattatgcagtgtctctgaaaagtcgaataaccatcaacccagatacatccaagaaccagttctccctgcagctgaagtctgtgactcccgaggacacggctgtgtattactgtgcaagagagtggctacgaacctcctatttctttgactactggggccagggaaccctggtcgccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 367 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4016 4015 M02948:184:000000000-JK6TB:1:1118:11639:22136_1:N productive Homsap IGHV3-7*03 F 1132 95.16 236/248 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 1 8 8 18 8.8.18 [11.17.38.11] CARDVYSSGWFPWSNYFDYW in-frame + ctggggggtcctttggactctcctgtgcagcctctggatgcacctttagcgattattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaacaaggaactgagaaatactatgtggaccctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagagacgtctatagcagtggctggttcccctggtctaactactttgactactggggccagggaattctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4017 4016 M02948:184:000000000-JK6TB:1:1118:22744:22940_1:N productive Homsap IGHV1-8*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F (see comment) 147 76.47 39/51 nt Homsap IGHD6-6*01 F 2 8 8 11 8.8.11 [2.17.38.11] CARGRPWTGPILW in-frame + other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccggggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtcgtccatggaccggcccaatactctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4018 4017 M02948:184:000000000-JK6TB:1:1118:20352:24091_1:N productive Homsap IGHV4-59*12 (F) 1100 100.00 220/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD1-26*01 F 3 8 7 17 8.7.17 [3.17.38.11] CARDNRDSGSYLPDAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagataacagggatagtgggagctacttgcctgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4019 4018 M02948:184:000000000-JK6TB:1:1118:18756:24436_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-19*01 F 1 8 7 16 8.7.16 [3.17.38.11] CATSRGPGYSSGWYGDYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgacctccaggggccctgggtatagcagtggctggtacggtgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4020 4019 M02948:184:000000000-JK6TB:1:1118:9550:24894_1:N: productive Homsap IGHV3-7*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*01 F 3 8 8 11 8.8.11 [3.17.38.11] CARDRGRRLFDYW in-frame + tgcagcctctggattcacctttagtagctattggatgagctgggtccgccaggctccagggaaggggctggagtgggtggccaacataaagcaagatggaagtgagaaatactatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcggggtcgccggctatttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4021 4020 M02948:184:000000000-JK6TB:1:1117:23554:2100_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-20*01 F 3 8 8 13 8.8.13 [2.17.38.11] CASYNWNDVAGFDYW in-frame + gcttctggaggcaccttcagcagctatgctattagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagttataactggaacgacgtggccggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4022 4021 M02948:184:000000000-JK6TB:1:1117:23007:2738_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ4*02 F 216 97.78 44/45 nt 8 8 6 8.8.6 [3.17.38.11] CAKGFDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaggctttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4023 4022 M02948:184:000000000-JK6TB:1:1117:22177:4954_1:N: productive Homsap IGHV3-48*03 F 1115 100.00 223/223 nt Homsap IGHJ1*01 F 242 96.15 50/52 nt Homsap IGHD1-26*01 F 2 8 8 18 8.8.18 [3.17.38.11] CAREGARGELLSLSEYFQHW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagagggggcaaggggggagctactatctctttcggaatacttccagcactggggccagggcaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4024 4023 M02948:184:000000000-JK6TB:1:1117:4881:5825_1:N:0 productive Homsap IGHV1-46*01 F, or Homsap IGHV1-46*03 F 1041 97.26 213/219 nt Homsap IGHJ1*01 F (see comment) 188 84.62 44/52 nt Homsap IGHD2-21*02 F 2 8 8 13 8.8.13 [2.17.38.11] CARVGNCGGDCYSDW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) gcatctggatacaccttcaccacctactatatgcactgggtgcgacaggcccctggacaagggcctgagtggatgggaataatcaaccctagtagtggtagcacaggctacgcacagaagttccagggcagagtcaccatgaccagggacacgtccatgaccacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagtggggaattgtggtggtgactgctactcggactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4025 4024 M02948:184:000000000-JK6TB:1:1117:27294:5896_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1096 93.55 232/248 nt Homsap IGHJ4*02 F 213 93.75 45/48 nt Homsap IGHD1-26*01 F 3 8 8 12 8.8.12 [11.17.38.11] CARDPFSGSYSDYW in-frame + cttgggggtcccttagaccctcctgtgcagcttctggtttcacctttagcagctatgccatgagctgggtccgccaggccccagggaaggggctggagtgggtctcacttattagtgacaatggtggtaacacatactacgcagactccgtgaagggccggttcaccatccccagagacaattcccagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatccgtttagtgggagctactccgactactggggccagggaaccctggtcaccgtctcctcagggggtgcatccgccccaacccttttccccc 0 0 348 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4026 4025 M02948:184:000000000-JK6TB:1:1117:21447:6346_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1028 96.36 212/220 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-6*01 F 3 8 7 9 8.7.9 [3.17.38.11] CAREGQLYSYW in-frame + cgctgtctatggtgggtccttcagtgattactactggacctggatccgccagcccccagggaagggactggagtggattggggaaatcaatcatagtggagacaccaagtgcaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagaagggcagctctatagctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtaagaattcccctcgcgatat 0 0 342 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4027 4026 M02948:184:000000000-JK6TB:1:1117:18500:6528_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ6*02 F (see comment) 184 77.42 48/62 nt Homsap IGHD2-15*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARLPHIVVVGIYGMDVW in-frame + other possibilities: Homsap IGHJ3*01 (shorter alignment but highest percentage of identity) aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacttccccatattgtagtggtggggatatacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4028 4027 M02948:184:000000000-JK6TB:1:1117:19679:6980_1:N: unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ2*01 F 247 96.23 51/53 nt Homsap IGHD5-18*01 F 1 8 8 19 8.8.19 [3.17.38.11] CARRGTDTAMVLNRNWYFDLW in-frame + rearranged sequence, stop codons aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtagatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagaagaggtaccgatacagctatggttcttaacagaaactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4029 4028 M02948:184:000000000-JK6TB:1:1117:24311:8025_1:N: unproductive (see comment) Homsap IGHV5-51*01 F, or Homsap IGHV5-51*02 F or Homsap IGHV5-51*03 F or Homsap IGHV5-51*07 F 735 91.38 159/174 nt 90.80 158/174 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD3-10*01 F 3 8 8 19 8.8.19 [3.1.38.11] CVRHYYSVVRGVIIFYGMDVW in-frame + rearranged sequence, stop codons in FR2-IMGT, from codon 39 of V-REGION: 48 nucleotides (from position 34 in the user submitted sequence), (do not cause frameshift) gagggttctggatacagctttaccacctattgaatcatctatcctgatgactctgatattagatataacccgtccttccaaggccaggtcaccattacagccgacaagtccatcaacaccgcctacctgcagtggagcggcctgaaggcctcggacaccgccgtgtattattgtgtgagacattactactctgtggttcggggagttattatcttctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 326 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4030 4029 M02948:184:000000000-JK6TB:1:1117:20370:8882_1:N: productive Homsap IGHV1-18*01 F 1050 97.72 214/219 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD1-1*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARLEGNYYYYYYMDVW in-frame + gcttctggttacacctttaacagctatggtatcaactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggttacacaaactatgcacagaagttccagggcagagtcaccatgaccgcagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagactggaaggaaattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4031 4030 M02948:184:000000000-JK6TB:1:1117:28556:8885_1:N: productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F or Homsap IGHV4-34*08 F 687 95.33 143/150 nt Homsap IGHJ5*02 F 246 98.04 50/51 nt Homsap IGHD2-2*01 F 3 X 7 18 X.7.18 [X.5.38.11] CATGSDIVVVPAARNWFDPW in-frame + atatcgcgaggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgactggatcggatattgtagtagtaccagctgctcgcaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 268 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4032 4031 M02948:184:000000000-JK6TB:1:1117:16878:9003_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1025 95.52 213/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARDDSGSWGYYNGMDVW in-frame + tgcagcctctggaatcacctttagcagttatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggaaataacacatactacgcagattccgtgaagggccggttcagcatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgatagtgggagctggggttactacaacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccggtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4033 4032 M02948:184:000000000-JK6TB:1:1117:9252:9131_1:N:0 productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD3-3*01 F 1 8 8 21 8.8.21 [2.17.38.11] CARAPDLRFLEWLFSYYYYMDVW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagcccccgatttacgatttttggagtggttattctcctactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4034 4033 M02948:184:000000000-JK6TB:1:1117:7090:9769_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 980 93.27 208/223 nt Homsap IGHJ6*03 F 274 93.55 58/62 nt Homsap IGHD2-2*01 F 2 8 8 20 8.8.20 [3.17.38.11] CARIHHCSSTSCPYYYYYMDVW in-frame + tgcagcctctggattcaccttcagtagctatggcatgcactgggtccgccaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaatccaccattgtagtagtaccagctgcccctactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 378 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4035 4034 M02948:184:000000000-JK6TB:1:1117:16554:10862_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD2-21*01 F 2 8 8 17 8.8.17 [3.17.38.11] CARPLAYCGGDCFDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacccctagcatattgtggtggtgattgctttgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4036 4035 M02948:184:000000000-JK6TB:1:1117:21313:10974_1:N productive Homsap IGHV1-18*01 F 915 90.87 199/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD1-1*01 F 1 8 8 15 8.8.15 [2.17.38.11] CASTSTGTGIDHWFDPW in-frame + gcttctggatacaccttcaccagttatgatatcaactgggtgcgacaggccactggacaagggcttgagtgggtgggatggatcagcacaagtaagggtaacacaaaccaagcacagaggctccagggcagagtcaccctgaccacagacacatccacgagcacagtctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagcacatcaactggaactggaattgatcactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4037 4036 M02948:184:000000000-JK6TB:1:1117:10290:11048_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1065 97.75 217/222 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD4-11*01 ORF 3 8 8 12 8.8.12 [3.17.38.11] CARLVTRVTVTDYW in-frame + aagggttctggaaacagctttaccagttactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctgctgactctgataccagatacagcccgtccttccaaggtcaggtcaccatctcagccgacaagtctatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagactcgttacccgggttacagtaactgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4038 4037 M02948:184:000000000-JK6TB:1:1117:7359:11397_1:N: productive Homsap IGHV1-2*02 F 1068 98.63 216/219 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD3-10*01 F 1 8 8 15 8.8.15 [2.17.38.11] CARGLWFGYYYYGMDVW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccaggggcacgtccatcagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggactatggttcgggtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4039 4038 M02948:184:000000000-JK6TB:1:1117:26570:11663_1:N productive Homsap IGHV1-69*05 F, or Homsap IGHV1-69*06 F or Homsap IGHV1-69*14 F 804 94.92 168/177 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD4-17*01 F 3 X 8 13 X.8.13 [X.13.38.11] CARALRAVTTPIDYW in-frame + cgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccaggaacacctccataagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcgcttcgtgcggtgactacacccattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 280 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4040 4039 M02948:184:000000000-JK6TB:1:1117:21520:11864_1:N productive Homsap IGHV1-8*02 F 969 93.61 205/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD3-3*01 F 2 8 8 14 8.8.14 [2.17.38.11] CATSHYDLATDAFDIW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatgaaccctaacagtggtaacacaggctatgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacatcccattacgatttggccaccgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4041 4040 M02948:184:000000000-JK6TB:1:1117:27001:12680_1:N unproductive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ6*03 F 310 100.00 62/62 nt Homsap IGHD6-6*01 F 2 8 7 X 8.7.X [3.17.38.11] CARDLEYSSSSGSWS#YYYYYYYMDVW out-of-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagatctcgagtatagcagctcgtccgggagctggagtgtattactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcatgtgagaattcccctcgcgatat 0 0 388 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4042 4041 M02948:184:000000000-JK6TB:1:1117:17568:12931_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1100 100.00 220/220 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD6-25*01 F 1 8 7 19 8.7.19 [3.17.38.11] CAREMISVDRELSLNDAFDIW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagaaatgataagcgtcgaccgcgaattgagcctaaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 372 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4043 4042 M02948:184:000000000-JK6TB:1:1117:13865:12988_1:N productive Homsap IGHV3-48*01 F 1007 94.62 211/223 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD2-2*02 F 2 8 8 12 8.8.12 [3.17.38.11] CARGFIYYYYMDVW in-frame + tgcagcctctggattcaccctcagtacctatagcatgaactgggtccgccaggctccagggaagggcctggagtgggtttcatacattagtagtggtggtattgccacaaactacgcagactctgtgaagggccgattcaccatctccagagacaatgccaagaactcactgttcctgcaaatgaacggcctgagagccgaggacacggctgtgtattactgtgcgagaggctttatctactactactacatggacgtctggggcaaagggaccgcggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4044 4043 M02948:184:000000000-JK6TB:1:1117:9587:13647_1:N: productive Homsap IGHV1-24*01 F 978 94.06 206/219 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD2-2*02 F 2 8 8 21 8.8.21 [2.17.38.11] CALIGGYCSSTSCYKYYYYMDVW in-frame + gcatctggatacaccttcaccagctactatatgcaatgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcactgattgggggatattgtagtagtaccagctgctataagtactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4045 4044 M02948:184:000000000-JK6TB:1:1117:10682:13806_1:N productive Homsap IGHV1-69*06 F, or Homsap IGHV1-69*14 F 1014 95.89 210/219 nt Homsap IGHJ6*03 F 265 91.94 57/62 nt Homsap IGHD6-6*01 F 1 8 8 17 8.8.17 [2.17.38.11] CARADSSSPSNYYYYMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcggcaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcggatagcagctcgccgagcaactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 365 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4046 4045 M02948:184:000000000-JK6TB:1:1117:19261:13898_1:N productive Homsap IGHV3-21*01 F, or Homsap IGHV3-21*02 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-25*01 F 2 8 8 21 8.8.21 [3.17.38.11] CAHLPGIAALGKVWDYYYGMDVW in-frame + tgcagcctctggattcacctttagtagctatagcatgagctgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtagtagtagttacatatactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgcacctcccgggtatagcagcgttgggcaaggtctgggactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 381 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4047 4046 M02948:184:000000000-JK6TB:1:1117:10606:13930_1:N productive Homsap IGHV3-11*06 F 1106 99.55 222/223 nt Homsap IGHJ6*03 F 250 91.53 54/59 nt Homsap IGHD2-21*01 F 2 8 8 11 8.8.11 [3.17.38.11] CARGSLYYYMDVW in-frame + tgcagcctctggattcaccttcagtgactactacatgagctggatccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtagtagttacacaaactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagaggttccctctactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4048 4047 M02948:184:000000000-JK6TB:1:1117:12150:14058_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1092 99.10 220/222 nt Homsap IGHJ3*02 F 223 94.00 47/50 nt Homsap IGHD3-22*01 F 2 8 8 22 8.8.22 [3.17.38.11] CARRPSDSSGYYLKSGTQCAFDIW in-frame + aaggtttctggatacagctttaccacctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacgcccctcggatagtagtggttattacttaaagtcgggcactcaatgtgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 383 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4049 4048 M02948:184:000000000-JK6TB:1:1117:4760:14520_1:N: productive Homsap IGHV1-2*04 F 1077 99.09 217/219 nt Homsap IGHJ3*02 F 241 98.00 49/50 nt Homsap IGHD2-15*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARDGGGFDAFDIW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggctgggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagatggcggtggcttcgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4050 4049 M02948:184:000000000-JK6TB:1:1117:15450:14732_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1115 100.00 223/223 nt Homsap IGHJ6*02 F 283 95.16 59/62 nt Homsap IGHD4-17*01 F 2 8 8 19 8.8.19 [3.17.38.11] CAKRFDGDYQHLYYYYGMDVW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaaaggttcgacggtgactaccagcacctctactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4051 4050 M02948:184:000000000-JK6TB:1:1117:17421:15079_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD1-26*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARVGQWELISDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagggtgggccagtgggagctcatatcggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4052 4051 M02948:184:000000000-JK6TB:1:1117:21456:15379_1:N productive Homsap IGHV4-34*01 F, or Homsap IGHV4-34*02 F 1100 100.00 220/220 nt Homsap IGHJ2*01 F 175 81.13 43/53 nt Homsap IGHD4-17*01 F 2 8 7 12 8.7.12 [3.17.38.11] CARAPTYGEPDDLW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggctgtgtattactgtgcgagagcgcccacctacggggagccagacgatctctggggccgtggcaccctggtcactgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 351 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4053 4052 M02948:184:000000000-JK6TB:1:1117:23384:16050_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 187 95.12 39/41 nt Homsap IGHD2-2*01 F 2 8 8 5 8.8.5 [2.17.38.11] CAGEAYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgggcgaagcctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 329 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4054 4053 M02948:184:000000000-JK6TB:1:1117:22041:16080_1:N productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARDDSGSWGYYNGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacatcagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaagtcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgatagtgggagctggggttactacaacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4055 4054 M02948:184:000000000-JK6TB:1:1117:26980:17333_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1064 98.18 216/220 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD3-10*02 F 2 8 7 10 8.7.10 [3.17.38.11] CARTYEGGFDYW in-frame + cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctattacagtgggagcaccaactacaacccctccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctaaactctgtgaccgctgcggacacggccgtatatttctgtgcgagaacttatgaagggggctttgattactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4056 4055 M02948:184:000000000-JK6TB:1:1117:14804:18251_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARRGDYLNWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagacggggggactacctaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 353 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4057 4056 M02948:184:000000000-JK6TB:1:1117:16950:18819_1:N productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD4-17*01 F 2 8 8 12 8.8.12 [3.17.38.11] CARGPDYGDYVDYW in-frame + tgcagcctccggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgaggggccccgactacggtgactacgtggactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4058 4057 M02948:184:000000000-JK6TB:1:1117:16290:19394_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1101 99.55 221/222 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD3-16*01 F 3 8 8 13 8.8.13 [3.17.38.11] CARGGSKYYHYMDVW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacagcgccatgtattactgtgcgagagggggatcaaaatactaccactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4059 4058 M02948:184:000000000-JK6TB:1:1117:20297:19526_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 255 100.00 51/51 nt Homsap IGHD6-13*01 F 2 8 8 16 8.8.16 [2.17.38.11] CARHLIAAAWKYNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggaggggtcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacatcttatagcagcagcttggaagtacaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4060 4059 M02948:184:000000000-JK6TB:1:1117:5982:19890_1:N: productive Homsap IGHV3-21*06 F 1043 96.41 215/223 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD5-18*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARDRDTATARTIFDYW in-frame + tgcaggctctggaatcagcttcagtgattatagcatgaactgggtccgccaggctccagggaaggggctggagtgggtctcatccattagtagtggtagtagttacatgtactacgcagactcagtgaagggccgattcaccatctccagagacaacgccaagaattcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagagatcgggatacagctacggcccggactatctttgactattggggccagggagccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4061 4060 M02948:184:000000000-JK6TB:1:1117:5843:20401_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1088 98.65 220/223 nt Homsap IGHJ6*02 F 211 82.26 51/62 nt Homsap IGHD6-6*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDLALEQLVYGMDVW in-frame + tgcagcctctggattcaccttcagtagctactggatgtactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaacagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaacagtctgagagccgaggacacggctgtttattactgtgcgagagacctagctctagagcagctggtctacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4062 4061 M02948:184:000000000-JK6TB:1:1117:27074:20847_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD3-22*01 F 2 8 8 12 8.8.12 [2.17.38.11] CAREWDSRNWFDPW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccggggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagggagtgggatagtagaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4063 4062 M02948:184:000000000-JK6TB:1:1117:14131:21761_1:N productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1088 98.65 220/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 2 8 8 19 8.8.19 [3.17.38.11] CARFGPYCSGGSCYPRDLDYW in-frame + tgcagcctctggattcacctttagcagctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctcttagtggtagtggtggtagcacatactacgcagactccgtgaagggccggttcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcgagattcggaccgtattgtagtggtggtagctgctacccaagggatcttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 375 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4064 4063 M02948:184:000000000-JK6TB:1:1117:24033:21804_1:N productive Homsap IGHV4-34*03 F 1050 97.72 214/219 nt Homsap IGHJ6*03 F 220 83.87 52/62 nt Homsap IGHD6-19*01 F 1 8 7 15 8.7.15 [3.17.38.11] CARVQRRSGWFYYMDVW in-frame + cgctgtctatggtgggtccttcagtggtcactactggagttggatccgccagcccccagggaaggggctggagtggattgcgcaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccaggtctccctgaagctgagctctgtgaccgccgcggacacggccgtgtattactgtgcgagagtccaaaggcgcagtggctggttctactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4065 4064 M02948:184:000000000-JK6TB:1:1117:22906:22438_1:N productive Homsap IGHV1-18*01 F 1068 98.63 216/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 8 8 21 8.8.21 [2.17.38.11] CARWSSDSSGYYGWANNYYFDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacgtccgtgtattactgtgcgagatggtcatctgatagtagtggttattacggttgggcgaacaactactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaaccattttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4066 4065 M02948:184:000000000-JK6TB:1:1117:9507:23245_1:N: productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*07 F 1055 97.73 215/220 nt Homsap IGHJ6*03 F (see comment) 157 72.58 45/62 nt Homsap IGHD6-19*01 F 2 8 7 14 8.7.14 [3.17.38.11] CARGIAVAGTIDMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) cactgtctctggtggctccatcagtagttactactggagctggatccggcagcccccagggaagggactggagtggattgggtatatctatcacagtgggagcaccaagtacaacccctccctcaagagtcgagtcaccctatcagtagacacgtccaagaatcagttctccctgaagctgagctctgtgatcgctgcggacacggccgtgtattactgtgcgagagggatagcagtggctgggaccattgacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4067 4066 M02948:184:000000000-JK6TB:1:1117:14223:24761_1:N productive Homsap IGHV4-34*03 F 1077 99.09 217/219 nt Homsap IGHJ4*02 F 177 85.42 41/48 nt Homsap IGHD1-20*01 F 3 8 7 10 8.7.10 [3.17.38.11] CARDHNGADGYW in-frame + cgctgtctatggtgggtccttcagtggttactactggagctggatccgccagcccccagggaaggggctggagtggattggggaaatcaatcatagtggaagcaccaactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcggacacggccatatattactgtgcgagagatcataacggtgccgatggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 345 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4068 4067 M02948:184:000000000-JK6TB:1:2119:23556:2103_1:N: productive Homsap IGHV4-38-2*01 F 1115 100.00 223/223 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 111 68.63 35/51 nt Homsap IGHD2-2*01 F 3 9 7 12 9.7.12 [3.17.38.11] CARGPAVNGMGLLG in-frame + TRP 118 not identified other possibilities: Homsap IGHJ5*02 and Homsap IGHJ4*02 (highest number of consecutive identical nucleotides); other possibilities: Homsap IGHJ4*02 (shorter alignment but highest percentage of identity) cgctgtctctggttactccatcagcagtggttactactggggctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgccgcagacacggccgtgtattactgtgcgaggggaccagctgttaacggtatggggttattagggggccagggaaccctggtcaccgtctccgcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatccccctcgcgatat 0 0 354 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4069 4068 M02948:184:000000000-JK6TB:1:2119:18568:2463_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-19*01 F 2 8 8 15 8.8.15 [2.17.38.11] CARDEGIAVAGRYFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagacgagggtatagcagtggctggccgttactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4070 4069 M02948:184:000000000-JK6TB:1:2119:25354:3692_1:N: productive Homsap IGHV4-38-2*01 F (see comment) 1028 96.36 212/220 nt Homsap IGHJ6*02 F 265 91.94 57/62 nt Homsap IGHD6-19*01 F 2 8 7 16 8.7.16 [3.17.38.11] CARARVAGPYYYYGMDVW in-frame + the submitted sequence and the closest germline V-GENE allele show different CDR1-IMGT amino acid lengths (8 AA in M02948:184:000000000-JK6TB:1:2119:25354:3692_1:N:; 9 AA in Homsap IGHV4-38-2*01): this may indicate potential nucleotide insertion(s) and/or deletion(s) which are not dealt in this release cgctgtctatggtgggtccttcagtggttactactggagctggatccggcagcccccagggaaggggctggagtggattgggagtatctatcatagtgggagcacctactacaacccgtccctcaagagtcgagtcaccatatcagtagacacgtccaagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccgtgtattactgtgcgagagcgcgagtggctggcccgtactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4071 4070 M02948:184:000000000-JK6TB:1:2119:25840:3796_1:N: productive Homsap IGHV1-2*04 F 996 94.98 208/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD4-17*01 F 1 8 8 15 8.8.15 [2.17.38.11] CASLRLPYYYYYGMDVW in-frame + gcttctggatacaccttcaccggcgactatatacactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtgacacaaagtatgaacagaaatttcagggctgggtcaccatgaccaggaacccgtccatcagcacagcctacatggagctgaacagactgagatctaacgacacggccgtgtattactgtgcgagtctacggctgccttactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttatccccctcgtctcctgtgagaattcccctcgcgatat 0 0 359 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4072 4071 M02948:184:000000000-JK6TB:1:2119:18102:4158_1:N: productive Homsap IGHV3-48*03 F 1106 99.55 222/223 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD6-19*01 F 2 8 8 13 8.8.13 [3.17.38.11] CARVAVGGTRSFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacattagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaactcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtgtattactgtgcaagggtcgcagtgggtggtactcgttcatttgactactggggccagggaaccctggtcaccgtgtcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgataatccccctcgcgatat 0 0 357 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4073 4072 M02948:184:000000000-JK6TB:1:2119:19008:4548_1:N: productive Homsap IGHV3-48*03 F 1097 99.10 221/223 nt Homsap IGHJ6*02 F 238 87.10 54/62 nt Homsap IGHD1-26*01 F 3 8 8 16 8.8.16 [3.17.38.11] CARDDSGSWGYYNGMDVW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccagggaaggggctggagtgggtttcatacatcagtagtagtggtagtaccatatactacgcagactctgtgaagggccgattcaccatctccagagacaacgccaagaagtcactgtatctgcaaatgaacagcctgagagccgaggacacggctgtttattactgtgcgagagatgatagtgggagctggggttactacaacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 366 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4074 4073 M02948:184:000000000-JK6TB:1:2119:26295:5166_1:N: productive Homsap IGHV3-23*01 F, or Homsap IGHV3-23*04 F or Homsap IGHV3-23D*01 F 1061 97.31 217/223 nt Homsap IGHJ6*03 F 256 90.32 56/62 nt Homsap IGHD4-11*01 ORF 3 8 8 17 8.8.17 [3.17.38.11] CAKVGTTITTYYYHYMDVW in-frame + tgcagcctctggattcacctttaacggctatgccatgagctgggtccgccaggctccagggaaggggctggagtgggtctcagctattagtggtagtggtggtagtacatactacgcagactccgtgaagggccgcttaaccatctccagagacaattccaagaacacgctgtatatgcaaatgaacagcctgagagccgaggacacggccgtatattactgtgcgaaagtggggactacaataactacgtactactatcactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 369 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4075 4074 M02948:184:000000000-JK6TB:1:2119:8781:7984_1:N:0 productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-2*01 F 2 8 8 27 8.8.27 [2.17.38.11] CARGIPTYRDCSSTSCYPGGLWLPHNDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagaggtattccaacctaccgggattgtagtagtaccagctgctatcccggtgggctatggttaccacacaatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 395 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4076 4075 M02948:184:000000000-JK6TB:1:2119:27777:9754_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ6*03 F (see comment) 193 79.03 49/62 nt Homsap IGHD5-24*01 ORF 3 8 8 20 8.8.20 [2.17.38.11] CARESNIRDGYNPVLGGYMDVW in-frame + other possibilities: Homsap IGHJ4*03 (shorter alignment but highest percentage of identity) gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagaatccaacataagagatggctacaatcctgtccttggtggctacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4077 4076 M02948:184:000000000-JK6TB:1:2119:14209:10051_1:N productive Homsap IGHV1-2*02 F 1005 95.43 209/219 nt Homsap IGHJ6*03 F 247 88.71 55/62 nt Homsap IGHD6-6*01 F 2 8 8 12 8.8.12 [2.17.38.11] CARVRPHYYYMDVW in-frame + gcttctggatacattttcaccggctactatatgcactgggtgcgacaggcccccggacaagggcttgagtggatgggatggatcaaccctaacagtggtgacacaaggtatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccattagcacagcctacatggagctgagcaggttgagatctgacgacacggccatatattactgtgcgagagttcgtccccactactactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4078 4077 M02948:184:000000000-JK6TB:1:2119:27849:10307_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-22*01 F 2 8 8 20 8.8.20 [2.17.38.11] CARRAYYDSSGYYLGAYYFDYW in-frame + gcttctggaggcaccttcagcagccatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagacgggcctactatgatagtagtggttattacttaggggcgtactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4079 4078 M02948:184:000000000-JK6TB:1:2119:29402:10613_1:N productive Homsap IGHV3-30*01 F 1070 97.76 218/223 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD1-26*01 F 3 8 8 15 8.8.15 [3.17.38.11] CARDHSYSGTYHYFDYW in-frame + tgcagcctctggattcaccttcagtagttatgaaatgaactgggtccgccaggctccaggcaaggggctagagtgggtggcagttatatcatatgatggaattaataaatactacgcagactccgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagctgaggacacggctgtgtattactgtgcgagagatcactcgtatagtgggacctaccactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 363 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4080 4079 M02948:184:000000000-JK6TB:1:2119:18492:10696_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-15*01 F 3 8 8 11 8.8.11 [2.17.38.11] CARVVGEFGVDYW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtgcgagagttgtaggggaattcggggttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 347 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4081 4080 M02948:184:000000000-JK6TB:1:2119:25677:12561_1:N productive Homsap IGHV3-7*01 F 1002 92.64 214/231 nt Homsap IGHJ4*02 F 231 97.92 47/48 nt Homsap IGHD1-1*01 F 3 8 8 11 8.8.11 [6.17.38.11] CARGAHWNDFDYW in-frame + ctctcctgcgcagcctctggattctcctttagtagttattggatgagttgggtccgccaggttccagggaaggggctggagtgggtggccaacataaagttcgatgaaactcagcaatactatgtggactctgtgaagggccgattcaccatctccagagacaattccaagaacacgctgtatctgcaaatgaacagcctgagagccgaggacacggctgtatattactgtgcaagaggcgcccactggaacgactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 328 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4082 4081 M02948:184:000000000-JK6TB:1:2119:20993:15005_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1074 98.20 218/222 nt Homsap IGHJ4*02 F 240 100.00 48/48 nt Homsap IGHD3-16*01 F 1 8 8 15 8.8.15 [3.17.38.11] CARGVGEPGTDYYFDYW in-frame + gcgggttctggatacagctttagcagctactggatcggctgggtgcgccagttgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgaggggtgtcggggagccaggaaccgattactactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccccgcgcgatat 0 0 362 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4083 4082 M02948:184:000000000-JK6TB:1:2119:17307:15015_1:N productive Homsap IGHV1-24*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 186 87.50 42/48 nt Homsap IGHD6-13*01 F 1 8 8 12 8.8.12 [2.17.38.11] CAREYVSSWELGYW in-frame + gtttccggatacaccctcactgaattatccatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgagagagtatgtcagcagctgggaattgggctactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaagtcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4084 4083 M02948:184:000000000-JK6TB:1:2119:1886:15267_1:N: productive Homsap IGHV1-18*04 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD3-10*01 F 1 8 8 18 8.8.18 [2.17.38.11] CARGYLRFGELIEDKGFDYW in-frame + gcttctggttacacctttaccagctacggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtctattactgtgcgagagggtatttacggttcggggagttaatagaggataaggggtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 368 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4085 4084 M02948:184:000000000-JK6TB:1:2119:13588:15982_1:N productive Homsap IGHV3-7*03 F 919 95.50 191/200 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD6-13*01 F 2 3 8 11 3.8.11 [X.17.38.11] CARGTAASYFDYW in-frame + gtagttattggatgagttgggtccgccaggctccaggtaaggggctggagtgggtggccaacataaagcaagatggaagtgacaaacgctatgtggactctgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatcttcaaatgaacagcctgagagccgaggacacggccgtgtattactgtgcgagaggaacagcagcctcatactttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 297 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4086 4085 M02948:184:000000000-JK6TB:1:2119:5420:16684_1:N: productive Homsap IGHV3-74*01 F, or Homsap IGHV3-74*02 F 1079 98.21 219/223 nt Homsap IGHJ4*02 F 198 93.33 42/45 nt Homsap IGHD4-23*01 ORF 1 8 8 6 8.8.6 [3.17.38.11] CARGYDYW in-frame + tgcagcttctggacgcaccttcagtagctactggatgcactgggtccgccaagctccagggaaggggctggtgtgggtctcacgtattaatagtgatgggagtagcacaagctacgcggactccgtgaagggccgattcaccatctccagagacaacgccaagaacacgctgtatctgcaaatgaatagtctgagagccgaggacacggctgtgtattactgtgcgagagggtatgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 336 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4087 4086 M02948:184:000000000-JK6TB:1:2119:15460:16883_1:N productive Homsap IGHV1-2*02 F 879 89.04 195/219 nt Homsap IGHJ5*01 F, or Homsap IGHJ5*02 F (see comment) 201 88.24 45/51 nt Homsap IGHD6-19*01 F 1 8 8 19 8.8.19 [2.17.38.11] CARDGSGECTGSACYRWVDYW in-frame + other possibilities: Homsap IGHJ4*02 (highest number of consecutive identical nucleotides) gcttctggatacagcttcagcgactattatctgaactgggtgcgacaggcccctggacaagggcctgagtggatgggatggatcagcccgaagagtggtgacaccaagtatgcacagaaatttcagggcaggatcaccatgaccagggacacgtccatcaccacagcctacatggaactgaatagtctaacatctgacgacacggccgtatattattgtgcgcgagacgggtcgggggaatgcactgggtccgcctgttatagatgggtcgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 371 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4088 4087 M02948:184:000000000-JK6TB:1:2119:25603:17304_1:N productive Homsap IGHV4-59*01 F, or Homsap IGHV4-59*02 F or Homsap IGHV4-59*07 F or Homsap IGHV4-61*08 F 965 93.18 205/220 nt Homsap IGHJ5*02 F 237 96.08 49/51 nt Homsap IGHD6-19*01 F 2 8 7 15 8.7.15 [3.17.38.11] CARYSVAGVGGNWFDPW in-frame + cgctgtctatggtgggtccttcagtgattactactggacctggatccgccagcccccagggaagggactggagtggattgggtatttctattacaatgggagcacccactacaacccctccctcaagagtcgagtcaccatatcaatagacacgtccgagaaccagttctccctgaagctgagctctgtgaccgctgcggacacggccatatattactgtgcgaggtactcagtggctggggtcgggggaaactggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 360 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4089 4088 M02948:184:000000000-JK6TB:1:2119:7541:17447_1:N: productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ3*02 F 250 100.00 50/50 nt Homsap IGHD3-10*01 F 2 8 8 21 8.8.21 [3.17.38.11] CASRPYYYGSGSYYERNDAFDIW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagccgcccgtattactatggttcggggagttattacgagcgcaatgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4090 4089 M02948:184:000000000-JK6TB:1:2119:7468:18468_1:N: productive Homsap IGHV1-2*02 F 959 95.67 199/208 nt Homsap IGHJ6*03 F (see comment) 211 82.26 51/62 nt Homsap IGHD3-3*01 F 2 6 8 15 6.8.15 [X.17.38.11] CASLPYYDFAPYYMDVW in-frame + other possibilities: Homsap IGHJ4*01 (shorter alignment but highest percentage of identity) caccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgagatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcaggctgagatctgacgacacggccgtgtattactgtgcgagtctaccgtattacgattttgctccttactacatggacgtctggggcaaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccc 0 0 317 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4091 4090 M02948:184:000000000-JK6TB:1:2119:13724:18826_1:N productive Homsap IGHV2-5*02 F 1227 99.20 247/249 nt Homsap IGHJ4*02 F 222 95.83 46/48 nt Homsap IGHD5-12*01 F 2 10 7 15 10.7.15 [11.17.38.11] CVNRPGRLPRSYYFGFW in-frame + acccagaccctcacgctgacctgcaccttctctgggttctcactcagcactagtggagtgggtgtgggctggagccgtcagcccccaggaaaggccctggagtggcttgcactcatttattgggatgatgataagcgctacagcccatctctgaagagcaggctcaccatcaccaaggacacctccaaaaaccaggtggtccttacaatgaccaacatggaccctgtggacacagccacatattactgtgtaaacagaccggggaggttgccacgaagctactactttggcttctggggccagggaaccctggtcaccgtctcctcagggggggcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 389 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4092 4091 M02948:184:000000000-JK6TB:1:2119:6580:18915_1:N: productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 204 91.67 44/48 nt Homsap IGHD6-13*01 F 1 8 8 20 8.8.20 [2.17.38.11] CASRLAQTLYSSSWYQGSFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagtagacttgctcaaaccttgtatagcagcagctggtaccaaggttcttttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaatgcccctcgcgatat 0 0 374 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4093 4092 M02948:184:000000000-JK6TB:1:2119:11269:19571_1:N productive Homsap IGHV1-18*01 F 1095 100.00 219/219 nt Homsap IGHJ5*02 F 210 90.20 46/51 nt Homsap IGHD3-10*01 F 3 8 8 9 8.8.9 [2.17.38.11] CTMVRPSFDPW in-frame + gcttctggttacacctttaccagctatggtatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcagcgcttacaatggtaacacaaactatgcacagaagctccagggcagagtcaccatgaccacagacacatccacgagcacagcctacatggagctgaggagcctgagatctgacgacacggccgtgtattactgtactatggttcgaccctcgttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcggctcctgtgagaagtcccctcgcgatat 0 0 341 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4094 4093 M02948:184:000000000-JK6TB:1:2119:13202:20116_1:N productive Homsap IGHV1-2*02 F 1005 95.43 209/219 nt Homsap IGHJ3*02 F 196 88.00 44/50 nt Homsap IGHD3-16*01 F 3 8 8 10 8.8.10 [2.17.38.11] CATVRELGFDIW in-frame + gcttctggatacaccttcaccggctactatatgcactgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacggttagggagctggggtttgatatctggggccaagggacaatggtcaccgtctcttcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 344 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4095 4094 M02948:184:000000000-JK6TB:1:2119:26324:20804_1:N productive Homsap IGHV1-2*02 F 996 94.98 208/219 nt Homsap IGHJ4*02 F, or Homsap IGHJ4*03 F 159 81.25 39/48 nt Homsap IGHD7-27*01 F 1 8 8 11 8.8.11 [2.17.38.11] CARPIPLTGTDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggatggatcaaccctaacagtggtggcacaaactatgcacagaagtttcagggcagggtcaccatgaccagggacacgtccatcagcacagcctacatggagctgagcagcctgagatctgacgacacggccgtgtattactgtgcgaggccgatacctctaactgggactgactactggggccaggggaccctagtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctccgtgagaattcccctcgcgatat 0 0 346 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4096 4095 M02948:184:000000000-JK6TB:1:2119:20335:21283_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1095 100.00 219/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-21*02 F 2 8 8 14 8.8.14 [2.17.38.11] CARAYCGGDCFAFDYW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagcaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgagagcatattgtggtggtgactgctttgcgtttgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 356 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4097 4096 M02948:184:000000000-JK6TB:1:2119:15289:21461_1:N productive Homsap IGHV1-69*01 F, or Homsap IGHV1-69*12 F or Homsap IGHV1-69*13 F or Homsap IGHV1-69D*01 F 1086 99.54 218/219 nt Homsap IGHJ6*02 F 301 98.39 61/62 nt Homsap IGHD5-12*01 F 3 8 8 21 8.8.21 [2.17.38.11] CARGGYSGYELIKYYYYYGMDVW in-frame + gcttctggaggcaccttcagcagctatgctatcagctgggtgcgacaggcccctggacaagggcttgagtggatgggagggatcatccctatctttggtacagtaaactacgcacagaagttccagggcagagtcacgattaccgcggacgaatccacgagcacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcgaggggcggatatagtggctacgagttgatcaaatactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 377 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4098 4097 M02948:184:000000000-JK6TB:1:2119:8379:22530_1:N: productive Homsap IGHV1-24*01 F 1086 99.54 218/219 nt Homsap IGHJ4*02 F 195 89.58 43/48 nt Homsap IGHD2-8*01 F 3 8 8 12 8.8.12 [2.17.38.11] CATGVGALLPIDYW in-frame + gtttccggatacaccctcactgaattatctatgcactgggtgcgacaggctcctggaaaagggcttgagtggatgggaggttttgatcctgaagatggtgaaacaatctacgcacagaagttccagggcagagtcaccatgaccgaggacacatctacagacacagcctacatggagctgagcagcctgagatctgaggacacggccgtgtattactgtgcaacaggggtgggagctttactcccgattgactactggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 350 2 (indelcorr)
84e9e5c8c101 "planemo upload commit d4be85014b638f1d50b318d4b735be7f6e973140"
rhpvorderman
parents:
diff changeset
4099 4098 M02948:184:000000000-JK6TB:1:2119:18285:24809_1:N productive Homsap IGHV5-51*01 F, or Homsap IGHV5-51*03 F 1110 100.00 222/222 nt Homsap IGHJ5*02 F 219 92.16 47/51 nt Homsap IGHD3-10*01 F 2 8 8 21 8.8.21 [3.17.38.11] CARVHYYYGSGSYYLPSFWFDPW in-frame + aagggttctggatacagctttaccagctactggatcggctgggtgcgccagatgcccgggaaaggcctggagtggatggggatcatctatcctggtgactctgataccagatacagcccgtccttccaaggccaggtcaccatctcagccgacaagtccatcagcaccgcctacctgcagtggagcagcctgaaggcctcggacaccgccatgtattactgtgcgagagtacattattactatggttcggggagttattatctcccctctttctggttcgacccctggggccagggaaccctggtcaccgtctcctcagggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattcccctcgcgatat 0 0 380 2 (indelcorr)