annotate README.md @ 67:ba33b94637ca draft

Uploaded
author davidvanzessen
date Tue, 29 Jan 2019 03:54:09 -0500
parents
children 58d2377b507d
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
67
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
1 # SHM CSR
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
2
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
3 Somatic hypermutation and class switch recombination pipeline
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
4
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
5 # Dependencies
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
6 --------------------
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
7 [Python 2.7](https://www.python.org/)
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
8 [Change-O](https://changeo.readthedocs.io/en/version-0.4.4/)
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
9 [Baseline](http://selection.med.yale.edu/baseline/)
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
10 [R data.table](https://cran.r-project.org/web/packages/data.table/data.table.pdf)
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
11 [R ggplot2](https://cran.r-project.org/web/packages/ggplot2/ggplot2.pdf)
ba33b94637ca Uploaded
davidvanzessen
parents:
diff changeset
12 [R reshape2](https://cran.r-project.org/web/packages/reshape/reshape.pdf)