Mercurial > repos > davidvanzessen > shm_csr
diff wrapper.sh @ 96:385dea3c6cb5 draft
planemo upload commit 423a48569c69301fdbf893ac3a649128404dfff5
author | rhpvorderman |
---|---|
date | Fri, 05 Jan 2024 08:53:22 +0000 |
parents | d63eff357515 |
children | d714f5ea83d7 |
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--- a/wrapper.sh Mon Mar 27 13:11:53 2023 +0000 +++ b/wrapper.sh Fri Jan 05 08:53:22 2024 +0000 @@ -23,7 +23,7 @@ class_filter=${19} empty_region_filter=${20} fast=${21} -BASENAME=$(basename "$input") +BASENAME=$(basename "$title") # Cut off .txz or .tgz suffix and also replace spaces with underscores. NEW_IMGT_PREFIX="new_IMGT_${BASENAME%.*}" NEW_IMGT_PREFIX=${NEW_IMGT_PREFIX// /_} @@ -31,7 +31,7 @@ #exec 5> debug_output.txt #BASH_XTRACEFD="5" ## Busybox date does not support '+%s.%N'. So use a custom program. Can be -## Compiled with cc -Os show_time_as_float.c -o show_time_as_float +## Compiled with cc -static -Os show_time_as_float.c -o show_time_as_float #PS4='$(${dir}/show_time_as_float) $LINENO: ' #set -x