Mercurial > repos > davidvanzessen > shm_csr

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<p class=MsoNormalCxSpFirst style='text-align:justify'><b><u><span lang=EN-GB
style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>SHM
frequency tab</span></u></b></p>

<p class=MsoNormalCxSpMiddle style='text-align:justify'><b><span lang=EN-GB
style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Graphs</span></b></p>

<p class=MsoNormalCxSpMiddle style='text-align:justify'><span lang=EN-GB
style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>These
graphs give insight into the level of SHM. The data represented in these graphs
can be downloaded in the download tab. <a name="OLE_LINK24"></a><a
name="OLE_LINK23"></a><a name="OLE_LINK90"></a><a name="OLE_LINK89">More
information on the values found in healthy individuals of different ages can be
found in IJspeert and van Schouwenburg et al, PMID: 27799928. </a></span></p>

<p class=MsoNormalCxSpMiddle style='text-align:justify'><u><span lang=EN-GB
style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Frequency
scatter plot</span></u></p>

<p class=MsoNormalCxSpMiddle style='text-align:justify'><span lang=EN-GB
style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>A
dot plot showing the percentage of SHM in each transcript divided into the
different (sub)classes. </span><span lang=NL style='font-size:12.0pt;
line-height:115%;font-family:"Times New Roman","serif"'>In the graph each dot
represents an individual transcript.</span></p>

<p class=MsoNormalCxSpMiddle style='text-align:justify'><u><span lang=EN-GB
style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Mutation
frequency by class</span></u></p>

<p class=MsoNormalCxSpLast style='text-align:justify'><span lang=EN-GB
style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>A
bar graph showing the percentage of transcripts that contain 0%, 0-2%, 2-5%,
5-10% 10-15%, 15-20% or more than 20% SHM for each subclass. </span></p>

<p class=MsoNormal><span lang=NL style='font-size:12.0pt;line-height:115%;
font-family:"Times New Roman","serif"'>Hanna IJspeert, Pauline A. van
Schouwenburg, David van Zessen, Ingrid Pico-Knijnenburg, Gertjan J. Driessen,
Andrew P. Stubbs, and Mirjam van der Burg (2016). </span><span
style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Evaluation
of the Antigen-Experienced B-Cell Receptor Repertoire in Healthy Children and
Adults. In <i>Frontiers in Immunolog, 7, pp. e410-410. </i>[<a
href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5066086/"><span
style='color:windowtext'>doi:10.3389/fimmu.2016.00410</span></a>][<a
href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5066086/"><span
style='color:windowtext'>Link</span></a>]</span></p>

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author	davidvanzessen
date	Tue, 29 Jan 2019 08:40:17 -0500
parents	ba33b94637ca
children	6809c63d9161