annotate boxplots.xml @ 1:3b78dc3c36df draft

Uploaded
author dereeper
date Tue, 10 Aug 2021 20:22:21 +0000
parents fff88b734caf
children 269130fc81f6
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
fff88b734caf Uploaded
dereeper
parents:
diff changeset
1 <tool id="boxplots" name="Interactive boxplots" version="1.0">
fff88b734caf Uploaded
dereeper
parents:
diff changeset
2 <description>using Highcharts library</description>
fff88b734caf Uploaded
dereeper
parents:
diff changeset
3 <command>perl ${__tool_directory__}/boxplots.pl $input $y_axis $output </command>
1
3b78dc3c36df Uploaded
dereeper
parents: 0
diff changeset
4 <requirements>
3b78dc3c36df Uploaded
dereeper
parents: 0
diff changeset
5 <requirement type="package" version="4.1.1">r-base</requirement>
3b78dc3c36df Uploaded
dereeper
parents: 0
diff changeset
6 </requirements>
0
fff88b734caf Uploaded
dereeper
parents:
diff changeset
7
fff88b734caf Uploaded
dereeper
parents:
diff changeset
8 <inputs>
fff88b734caf Uploaded
dereeper
parents:
diff changeset
9 <param format="tabular" name="input" type="data" label="input tabular file"/>
fff88b734caf Uploaded
dereeper
parents:
diff changeset
10 <param name="y_axis" type="text" label="Y axis" value="y_axis_name"/>
fff88b734caf Uploaded
dereeper
parents:
diff changeset
11 </inputs>
fff88b734caf Uploaded
dereeper
parents:
diff changeset
12
fff88b734caf Uploaded
dereeper
parents:
diff changeset
13 <outputs>
fff88b734caf Uploaded
dereeper
parents:
diff changeset
14 <data format="html" name="output" label="HTML output"/>
fff88b734caf Uploaded
dereeper
parents:
diff changeset
15
fff88b734caf Uploaded
dereeper
parents:
diff changeset
16 </outputs>
fff88b734caf Uploaded
dereeper
parents:
diff changeset
17 <help><![CDATA[
fff88b734caf Uploaded
dereeper
parents:
diff changeset
18 You should provide a tabular file that looks like:
fff88b734caf Uploaded
dereeper
parents:
diff changeset
19
fff88b734caf Uploaded
dereeper
parents:
diff changeset
20 ::
fff88b734caf Uploaded
dereeper
parents:
diff changeset
21
fff88b734caf Uploaded
dereeper
parents:
diff changeset
22 A B C
fff88b734caf Uploaded
dereeper
parents:
diff changeset
23 category1 1;3;5 4;5;7 9;3
fff88b734caf Uploaded
dereeper
parents:
diff changeset
24 category2 5;3;5 5;5;6 10;2
fff88b734caf Uploaded
dereeper
parents:
diff changeset
25
fff88b734caf Uploaded
dereeper
parents:
diff changeset
26 ]]></help>
fff88b734caf Uploaded
dereeper
parents:
diff changeset
27 </tool>