Mercurial > repos > dereeper > pgap
diff PGAP-1.2.1/README @ 0:83e62a1aeeeb draft
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author | dereeper |
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date | Thu, 24 Jun 2021 13:51:52 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/PGAP-1.2.1/README Thu Jun 24 13:51:52 2021 +0000 @@ -0,0 +1,24 @@ +-=- PGAP 1.2.1 README -=- +PGAP is a Pan-Genomes Analysis Pipeline. + +For the installation and usage of PGAP, please refer to manual.pdf. + +There is also a brief tutorial in manual.pdf. + +If there are any problems or suggestions in using PGAP, please mail to PGAP@big.ac.cn + +-=- Change Log 1.2.1 -=- +1.Fix the bug in Converter_NCBINewFormatData.pl. + +-=- Change Log 1.2.0 -=- +1.A new script (Converter_NCBINewFormatData.pl) was developed for converting new format bacterial genomic data from NCBI at ftp://ftp.ncbi.nlm.nih.gov/genomes/all + +-=- Change Log 1.12 -=- +1.Fix the bug in the Perl converter Converter_draft.pl. + +-=- Change Log 1.11 -=- +1.Fix the bug in the two Perl converters (Converter_finished.pl and Converter_draft.pl). + +-=- Change Log 1.1 -=- +1.Add sampling strategy into the pan-genome analysis module. This strategy will efficiently reduce time cost and memory cost. +2.Revise the input data for SNP-based phylogenetic analysis