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diff Roary/t/data/core_alignment_gene_lookup/query_1.gff @ 0:c47a5f61bc9f draft

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author dereeper
date Fri, 14 May 2021 20:27:06 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Roary/t/data/core_alignment_gene_lookup/query_1.gff	Fri May 14 20:27:06 2021 +0000
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+##gff-version 3
+##sequence-region gnl|IFR|Ef_ABC123_contig000001 1 1320
+gnl|IFR|Ef_ABC123_contig000001	Prodigal:2.6	CDS	52	513	.	+	0	ID=Ef_ABC123_00010;Parent=Ef_ABC123_00010_gene;inference=ab initio prediction:Prodigal:2.6,similar to AA sequence:RefSeq:CJSA_1363;locus_tag=Ef_ABC123_00010;product=CJSA_1363 putative sugar transferase:1372570 reverse MW:76273;protein_id=gnl|IFR|Ef_ABC123_00010
+gnl|IFR|Ef_ABC123_contig000001	Prodigal:2.6	CDS	510	746	.	+	0	ID=Ef_ABC123_00020;Parent=Ef_ABC123_00020_gene;inference=ab initio prediction:Prodigal:2.6,similar to AA sequence:RefSeq:CJSA_1363;locus_tag=Ef_ABC123_00020;product=CJSA_1363 putative sugar transferase:1372570 reverse MW:76273;protein_id=gnl|IFR|Ef_ABC123_00020
+gnl|IFR|Ef_ABC123_contig000001	Prodigal:2.6	CDS	878	1207	.	+	0	ID=Ef_ABC123_00030;Parent=Ef_ABC123_00030_gene;inference=ab initio prediction:Prodigal:2.6,similar to AA sequence:RefSeq:A911_06907;locus_tag=Ef_ABC123_00030;product=A911_06907 putative sugar transferase:1355468 reverse MW:73559;protein_id=gnl|IFR|Ef_ABC123_00030
+##FASTA
+>gnl|IFR|Ef_ABC123_contig000001
+GAAAAAGAAAAAATAAACTATAAAAACATATCAGCTGAACTTGCTTGGGAAATGAATCTA
+CCTTTACCTGATAATTATGAATTTGTGTTTTTATCTGGTGGATTATCTGGGCATGCTGCA
+ATGATGTCATTTTTTAATGTTTGTGGCATTGGATATTTGTATCATCATATGGATTTAATG
+AAAAATAGATATATAGATTATTACCATTTTTCTAGGATTGAAAATTTATATTCAATTATA
+ACATATGGACAATACAGTTTAACGCAAGGAATGAATAATATAGGTAAATATTTGACTTTA
+ATTAATAAAATTCCAATTCTTTTTTTGGTAAGAGATCCCATATCAAGACTAAAAACCGGA
+GTAAATCATCCTATTCTAAATCCAAAAAGTATGAAGGAGATATGTTTAAACAATGATTAT
+AGTGATGTGTTTAAGAATAAAATGTATGTTGGCGATATTGGAAAAAATTTTTACTATTCA
+GAAAAGCCAAGCATGAAATATTTACCTAGATGATTAATGAAGATACAATGTATCAGACAT
+CGCTTTGCTTATTATTTTCAAATAGAGATATTACTTATATTGACATGGAAGAAATAAAAC
+CAGCAAAGGCATTCGATACAATGTGTGATTTAGCTAACAAATTTGGTTTTAAGAAACCAA
+CGGATAAAAAATTTTTTGAAGGAGTTATGAATGGAGATTTAGCAGGTTTTATACCTATTA
+ATTTATTTATTGATAAAAAAATTTAATTTATAATAACAAAGTTATTTATAAAGATAATGA
+TAGCATCCATCTTCAAATCACATCTACAAATTTAATTGAAATTTATAAACAATCTAAAGA
+ATATATCAACTTTACTAAAGAATTTTTTGATAAACCTTTGAAATATGAAAATTTGGGAAT
+ATTTTTAAAACCACAAGAATTTGAGCGTTTAAAGCAAGATTCTAAGCTATTTGATGTTGC
+TAAAAGATATTTGAATAATTTTATTGAAGCTTTAGAAGAGAGAATAGACCTAGAAAAAGC
+TAAATTATTTAAAGAAAAAGACGTGTTAAACTATTTAAAAGAAAATAAAGAATTAAGAGT
+TAAGTTAAAAAACATATTAGATAAAGAACTTGTTCATATTAAACAACATCGTCCAGATAT
+AGTAGCTTCTTGGAAATACTATCAAGAATTTGAACAAATGTGCAAGGAGTTGAATGGTAA
+TATTTAGGAGAAAGATTTGTAAATTAATAAAAAAAAGATATAATTGTGTTTAAAATTAGA
+GAAAGGAATCAATATGAAACAAGGGGATTTTACAAAAGTTGCAAAACATTATCACAATAG
\ No newline at end of file