Mercurial > repos > dereeper > roary_plots
diff Roary/t/data/core_alignment_gene_lookup/query_1.gff @ 0:c47a5f61bc9f draft
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author | dereeper |
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date | Fri, 14 May 2021 20:27:06 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Roary/t/data/core_alignment_gene_lookup/query_1.gff Fri May 14 20:27:06 2021 +0000 @@ -0,0 +1,29 @@ +##gff-version 3 +##sequence-region gnl|IFR|Ef_ABC123_contig000001 1 1320 +gnl|IFR|Ef_ABC123_contig000001 Prodigal:2.6 CDS 52 513 . + 0 ID=Ef_ABC123_00010;Parent=Ef_ABC123_00010_gene;inference=ab initio prediction:Prodigal:2.6,similar to AA sequence:RefSeq:CJSA_1363;locus_tag=Ef_ABC123_00010;product=CJSA_1363 putative sugar transferase:1372570 reverse MW:76273;protein_id=gnl|IFR|Ef_ABC123_00010 +gnl|IFR|Ef_ABC123_contig000001 Prodigal:2.6 CDS 510 746 . + 0 ID=Ef_ABC123_00020;Parent=Ef_ABC123_00020_gene;inference=ab initio prediction:Prodigal:2.6,similar to AA sequence:RefSeq:CJSA_1363;locus_tag=Ef_ABC123_00020;product=CJSA_1363 putative sugar transferase:1372570 reverse MW:76273;protein_id=gnl|IFR|Ef_ABC123_00020 +gnl|IFR|Ef_ABC123_contig000001 Prodigal:2.6 CDS 878 1207 . + 0 ID=Ef_ABC123_00030;Parent=Ef_ABC123_00030_gene;inference=ab initio prediction:Prodigal:2.6,similar to AA sequence:RefSeq:A911_06907;locus_tag=Ef_ABC123_00030;product=A911_06907 putative sugar transferase:1355468 reverse MW:73559;protein_id=gnl|IFR|Ef_ABC123_00030 +##FASTA +>gnl|IFR|Ef_ABC123_contig000001 +GAAAAAGAAAAAATAAACTATAAAAACATATCAGCTGAACTTGCTTGGGAAATGAATCTA +CCTTTACCTGATAATTATGAATTTGTGTTTTTATCTGGTGGATTATCTGGGCATGCTGCA +ATGATGTCATTTTTTAATGTTTGTGGCATTGGATATTTGTATCATCATATGGATTTAATG +AAAAATAGATATATAGATTATTACCATTTTTCTAGGATTGAAAATTTATATTCAATTATA +ACATATGGACAATACAGTTTAACGCAAGGAATGAATAATATAGGTAAATATTTGACTTTA +ATTAATAAAATTCCAATTCTTTTTTTGGTAAGAGATCCCATATCAAGACTAAAAACCGGA +GTAAATCATCCTATTCTAAATCCAAAAAGTATGAAGGAGATATGTTTAAACAATGATTAT +AGTGATGTGTTTAAGAATAAAATGTATGTTGGCGATATTGGAAAAAATTTTTACTATTCA +GAAAAGCCAAGCATGAAATATTTACCTAGATGATTAATGAAGATACAATGTATCAGACAT +CGCTTTGCTTATTATTTTCAAATAGAGATATTACTTATATTGACATGGAAGAAATAAAAC +CAGCAAAGGCATTCGATACAATGTGTGATTTAGCTAACAAATTTGGTTTTAAGAAACCAA +CGGATAAAAAATTTTTTGAAGGAGTTATGAATGGAGATTTAGCAGGTTTTATACCTATTA +ATTTATTTATTGATAAAAAAATTTAATTTATAATAACAAAGTTATTTATAAAGATAATGA +TAGCATCCATCTTCAAATCACATCTACAAATTTAATTGAAATTTATAAACAATCTAAAGA +ATATATCAACTTTACTAAAGAATTTTTTGATAAACCTTTGAAATATGAAAATTTGGGAAT +ATTTTTAAAACCACAAGAATTTGAGCGTTTAAAGCAAGATTCTAAGCTATTTGATGTTGC +TAAAAGATATTTGAATAATTTTATTGAAGCTTTAGAAGAGAGAATAGACCTAGAAAAAGC +TAAATTATTTAAAGAAAAAGACGTGTTAAACTATTTAAAAGAAAATAAAGAATTAAGAGT +TAAGTTAAAAAACATATTAGATAAAGAACTTGTTCATATTAAACAACATCGTCCAGATAT +AGTAGCTTCTTGGAAATACTATCAAGAATTTGAACAAATGTGCAAGGAGTTGAATGGTAA +TATTTAGGAGAAAGATTTGTAAATTAATAAAAAAAAGATATAATTGTGTTTAAAATTAGA +GAAAGGAATCAATATGAAACAAGGGGATTTTACAAAAGTTGCAAAACATTATCACAATAG \ No newline at end of file