--- a/egglib/CalculateDiversityIndexes.xml	Fri Jul 10 10:38:43 2015 -0400
+++ b/egglib/CalculateDiversityIndexes.xml	Tue Dec 15 05:18:02 2015 -0500
@@ -1,6 +1,11 @@
 <tool id="calculate_diversity" name="Diversity by gene" version="2.1.6">
 	<description>calculates various diversity indexes with EggLib.</description>
-	<command interpreter="bash">./CalculateDiversityIndexes.sh $input $output $log
+    <!-- [STRONGLY RECOMMANDED] Exit code rules -->
+    <stdio>
+        <!-- [HELP] If no exit code rule is defined, the tool will stop if anything is written to STDERR -->
+        <exit_code range="1:" level="fatal" />
+    </stdio>
+    <command interpreter="bash">./CalculateDiversityIndexes.sh $input $output $log
     </command>
 	<inputs>
 		<param format="fasta" name="input" type="data" label="Fasta alignment" help="..."/>
@@ -9,20 +14,15 @@
 		<data format="txt" name="output" label="Diversity"/>
 		<data format="txt" name="log" label="Logfile"/>
 	</outputs>
-    <!-- [STRONGLY RECOMMANDED] Exit code rules -->
-    <stdio>
-        <!-- [HELP] If no exit code rule is defined, the tool will stop if anything is written to STDERR -->
-        <exit_code range="1:" level="fatal" />
-    </stdio>
     
     <!-- [OPTIONAL] Tests to be run manually by the Galaxy admin -->
     <tests>
         <!-- [HELP] Test files have to be in the ~/test-data directory -->
         <!-- [HELP] Multiple tests can be defined with different parameters -->
-<!--
         <test>
+         <param name="input" value="egglib-alignment.fa" />
+         <output name="output" file="egglib-result.txt" />
         </test>
--->
     </tests>
 	<help>