Mercurial > repos > dereeper > sniplay
view check_gwas_inputs/CheckGWASInputs.sh @ 9:98c37a5d67f4 draft
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author | dereeper |
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date | Wed, 07 Feb 2018 22:08:47 -0500 |
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#!/bin/bash hapmap=$1 trait=$2 out_hapmap=$3 out_trait=$4 stats=$5 directory=`dirname $0` mkdir tmpdir$$ #cp -rf $input tmpdir$$/input perl $directory/CheckGWASInputs.pl -h $hapmap -t $trait -o tmpdir$$/out >>$stats 2>&1 ls ls tmpdir$$/ mv tmpdir$$/out.hapmap $out_hapmap mv tmpdir$$/out.trait $out_trait