Mercurial > repos > devteam > blast_datatypes

annotate test-data/blastp_four_human_vs_rhodopsin.xml @ 2:45ba7c750bc8 draft

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This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
author peterjc
date Thu, 20 Sep 2012 10:12:43 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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2
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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1 <?xml version="1.0"?>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "NCBI_BlastOutput.dtd">
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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3 <BlastOutput>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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4 <BlastOutput_program>blastp</BlastOutput_program>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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5 <BlastOutput_version>BLASTP 2.2.25+</BlastOutput_version>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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7 <BlastOutput_db></BlastOutput_db>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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8 <BlastOutput_query-ID>sp|Q9BS26|ERP44_HUMAN</BlastOutput_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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9 <BlastOutput_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</BlastOutput_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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10 <BlastOutput_query-len>406</BlastOutput_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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11 <BlastOutput_param>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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12 <Parameters>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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13 <Parameters_matrix>BLOSUM62</Parameters_matrix>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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14 <Parameters_expect>1e-08</Parameters_expect>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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15 <Parameters_gap-open>11</Parameters_gap-open>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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16 <Parameters_gap-extend>1</Parameters_gap-extend>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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17 <Parameters_filter>F</Parameters_filter>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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18 </Parameters>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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19 </BlastOutput_param>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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20 <BlastOutput_iterations>
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21 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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22 <Iteration_iter-num>1</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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23 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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24 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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25 <Iteration_query-len>406</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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26 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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27 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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28 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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29 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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30 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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31 <Statistics_hsp-len>30</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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32 <Statistics_eff-space>119568</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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33 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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34 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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35 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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36 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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37 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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38 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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39 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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40 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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41 <Iteration_iter-num>2</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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42 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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43 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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44 <Iteration_query-len>406</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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45 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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46 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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47 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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48 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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49 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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50 <Statistics_hsp-len>30</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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51 <Statistics_eff-space>119568</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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52 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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53 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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54 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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55 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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56 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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57 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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58 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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59 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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60 <Iteration_iter-num>3</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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61 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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diff changeset
62 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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63 <Iteration_query-len>406</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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64 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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65 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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66 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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67 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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68 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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69 <Statistics_hsp-len>30</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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70 <Statistics_eff-space>119568</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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71 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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72 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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73 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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74 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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75 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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76 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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77 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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78 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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79 <Iteration_iter-num>4</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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80 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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81 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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82 <Iteration_query-len>406</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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83 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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84 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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85 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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86 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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87 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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88 <Statistics_hsp-len>30</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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89 <Statistics_eff-space>119568</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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90 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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91 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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92 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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93 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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94 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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95 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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96 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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97 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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98 <Iteration_iter-num>5</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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99 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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100 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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101 <Iteration_query-len>406</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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102 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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103 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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104 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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105 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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106 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
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107 <Statistics_hsp-len>30</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
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108 <Statistics_eff-space>119568</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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109 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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110 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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parents:
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111 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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112 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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113 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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114 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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115 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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116 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
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parents:
diff changeset
117 <Iteration_iter-num>6</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
118 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
119 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
120 <Iteration_query-len>406</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
121 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
122 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
123 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
124 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
125 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
126 <Statistics_hsp-len>30</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
127 <Statistics_eff-space>119568</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
128 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
129 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
130 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
131 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
132 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
133 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
134 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
135 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
136 <Iteration_iter-num>7</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
137 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
138 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
139 <Iteration_query-len>1161</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
140 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
141 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
142 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
143 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
144 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
145 <Statistics_hsp-len>38</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
146 <Statistics_eff-space>348130</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
147 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
148 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
149 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
150 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
151 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
152 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
153 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
154 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
155 <Iteration_iter-num>8</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
156 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
157 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
158 <Iteration_query-len>1161</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
159 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
160 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
161 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
162 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
163 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
164 <Statistics_hsp-len>38</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
165 <Statistics_eff-space>348130</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
166 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
167 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
168 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
169 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
170 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
171 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
172 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
173 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
174 <Iteration_iter-num>9</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
175 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
176 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
177 <Iteration_query-len>1161</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
178 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
179 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
180 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
181 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
182 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
183 <Statistics_hsp-len>38</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
184 <Statistics_eff-space>348130</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
185 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
186 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
187 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
188 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
189 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
190 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
191 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
192 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
193 <Iteration_iter-num>10</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
194 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
195 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
196 <Iteration_query-len>1161</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
197 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
198 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
199 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
200 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
201 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
202 <Statistics_hsp-len>38</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
203 <Statistics_eff-space>348130</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
204 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
205 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
206 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
207 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
208 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
209 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
210 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
211 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
212 <Iteration_iter-num>11</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
213 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
214 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
215 <Iteration_query-len>1161</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
216 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
217 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
218 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
219 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
220 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
221 <Statistics_hsp-len>38</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
222 <Statistics_eff-space>348130</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
223 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
224 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
225 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
226 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
227 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
228 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
229 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
230 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
231 <Iteration_iter-num>12</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
232 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
233 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
234 <Iteration_query-len>1161</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
235 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
236 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
237 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
238 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
239 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
240 <Statistics_hsp-len>38</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
241 <Statistics_eff-space>348130</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
242 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
243 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
244 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
245 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
246 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
247 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
248 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
249 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
250 <Iteration_iter-num>13</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
251 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
252 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
253 <Iteration_query-len>1382</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
254 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
255 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
256 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
257 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
258 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
259 <Statistics_hsp-len>39</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
260 <Statistics_eff-space>414987</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
261 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
262 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
263 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
264 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
265 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
266 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
267 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
268 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
269 <Iteration_iter-num>14</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
270 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
271 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
272 <Iteration_query-len>1382</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
273 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
274 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
275 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
276 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
277 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
278 <Statistics_hsp-len>39</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
279 <Statistics_eff-space>414987</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
280 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
281 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
282 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
283 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
284 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
285 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
286 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
287 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
288 <Iteration_iter-num>15</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
289 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
290 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
291 <Iteration_query-len>1382</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
292 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
293 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
294 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
295 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
296 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
297 <Statistics_hsp-len>39</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
298 <Statistics_eff-space>414987</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
299 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
300 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
301 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
302 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
303 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
304 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
305 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
306 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
307 <Iteration_iter-num>16</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
308 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
309 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
310 <Iteration_query-len>1382</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
311 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
312 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
313 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
314 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
315 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
316 <Statistics_hsp-len>39</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
317 <Statistics_eff-space>414987</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
318 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
319 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
320 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
321 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
322 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
323 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
324 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
325 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
326 <Iteration_iter-num>17</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
327 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
328 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
329 <Iteration_query-len>1382</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
330 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
331 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
332 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
333 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
334 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
335 <Statistics_hsp-len>39</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
336 <Statistics_eff-space>414987</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
337 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
338 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
339 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
340 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
341 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
342 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
343 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
344 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
345 <Iteration_iter-num>18</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
346 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
347 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
348 <Iteration_query-len>1382</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
349 <Iteration_hits></Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
350 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
351 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
352 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
353 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
354 <Statistics_hsp-len>39</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
355 <Statistics_eff-space>414987</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
356 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
357 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
358 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
359 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
360 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
361 <Iteration_message>No hits found</Iteration_message>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
362 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
363 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
364 <Iteration_iter-num>19</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
365 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
366 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
367 <Iteration_query-len>348</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
368 <Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
369 <Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
370 <Hit_num>1</Hit_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
371 <Hit_id>gi|57163783|ref|NP_001009242.1|</Hit_id>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
372 <Hit_def>rhodopsin [Felis catus]</Hit_def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
373 <Hit_accession>NP_001009242</Hit_accession>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
374 <Hit_len>348</Hit_len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
375 <Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
376 <Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
377 <Hsp_num>1</Hsp_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
378 <Hsp_bit-score>701.049065538619</Hsp_bit-score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
379 <Hsp_score>1808</Hsp_score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
380 <Hsp_evalue>0</Hsp_evalue>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
381 <Hsp_query-from>1</Hsp_query-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
382 <Hsp_query-to>348</Hsp_query-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
383 <Hsp_hit-from>1</Hsp_hit-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
384 <Hsp_hit-to>348</Hsp_hit-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
385 <Hsp_query-frame>0</Hsp_query-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
386 <Hsp_hit-frame>0</Hsp_hit-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
387 <Hsp_identity>336</Hsp_identity>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
388 <Hsp_positive>343</Hsp_positive>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
389 <Hsp_gaps>0</Hsp_gaps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
390 <Hsp_align-len>348</Hsp_align-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
391 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
392 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
393 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
394 </Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
395 </Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
396 </Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
397 </Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
398 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
399 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
400 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
401 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
402 <Statistics_hsp-len>29</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
403 <Statistics_eff-space>101761</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
404 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
405 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
406 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
407 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
408 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
409 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
410 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
411 <Iteration_iter-num>20</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
412 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
413 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
414 <Iteration_query-len>348</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
415 <Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
416 <Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
417 <Hit_num>1</Hit_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
418 <Hit_id>gi|3024260|sp|P56514.1|OPSD_BUFBU</Hit_id>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
419 <Hit_def>RecName: Full=Rhodopsin</Hit_def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
420 <Hit_accession>P56514</Hit_accession>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
421 <Hit_len>354</Hit_len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
422 <Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
423 <Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
424 <Hsp_num>1</Hsp_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
425 <Hsp_bit-score>619.001555868222</Hsp_bit-score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
426 <Hsp_score>1595</Hsp_score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
427 <Hsp_evalue>0</Hsp_evalue>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
428 <Hsp_query-from>1</Hsp_query-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
429 <Hsp_query-to>341</Hsp_query-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
430 <Hsp_hit-from>1</Hsp_hit-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
431 <Hsp_hit-to>342</Hsp_hit-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
432 <Hsp_query-frame>0</Hsp_query-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
433 <Hsp_hit-frame>0</Hsp_hit-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
434 <Hsp_identity>290</Hsp_identity>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
435 <Hsp_positive>322</Hsp_positive>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
436 <Hsp_gaps>1</Hsp_gaps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
437 <Hsp_align-len>342</Hsp_align-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
438 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE</Hsp_qseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
439 <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE</Hsp_hseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
440 <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S++GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF++QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE</Hsp_midline>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
441 </Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
442 </Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
443 </Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
444 </Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
445 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
446 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
447 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
448 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
449 <Statistics_hsp-len>29</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
450 <Statistics_eff-space>101761</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
451 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
452 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
453 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
454 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
455 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
456 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
457 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
458 <Iteration_iter-num>21</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
459 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
460 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
461 <Iteration_query-len>348</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
462 <Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
463 <Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
464 <Hit_num>1</Hit_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
465 <Hit_id>gi|283855846|gb|ADB45242.1|</Hit_id>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
466 <Hit_def>rhodopsin [Cynopterus brachyotis]</Hit_def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
467 <Hit_accession>ADB45242</Hit_accession>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
468 <Hit_len>328</Hit_len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
469 <Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
470 <Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
471 <Hsp_num>1</Hsp_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
472 <Hsp_bit-score>653.284318124867</Hsp_bit-score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
473 <Hsp_score>1684</Hsp_score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
474 <Hsp_evalue>0</Hsp_evalue>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
475 <Hsp_query-from>11</Hsp_query-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
476 <Hsp_query-to>338</Hsp_query-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
477 <Hsp_hit-from>1</Hsp_hit-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
478 <Hsp_hit-to>328</Hsp_hit-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
479 <Hsp_query-frame>0</Hsp_query-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
480 <Hsp_hit-frame>0</Hsp_hit-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
481 <Hsp_identity>311</Hsp_identity>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
482 <Hsp_positive>321</Hsp_positive>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
483 <Hsp_gaps>0</Hsp_gaps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
484 <Hsp_align-len>328</Hsp_align-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
485 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVS</Hsp_qseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
486 <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
487 <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T S</Hsp_midline>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
488 </Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
489 </Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
490 </Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
491 </Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
492 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
493 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
494 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
495 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
496 <Statistics_hsp-len>29</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
497 <Statistics_eff-space>101761</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
498 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
499 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
500 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
501 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
502 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
503 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
504 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
505 <Iteration_iter-num>22</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
506 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
507 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
508 <Iteration_query-len>348</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
509 <Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
510 <Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
511 <Hit_num>1</Hit_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
512 <Hit_id>gi|283855823|gb|ADB45229.1|</Hit_id>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
513 <Hit_def>rhodopsin [Myotis pilosus]</Hit_def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
514 <Hit_accession>ADB45229</Hit_accession>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
515 <Hit_len>328</Hit_len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
516 <Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
517 <Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
518 <Hsp_num>1</Hsp_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
519 <Hsp_bit-score>631.327942297578</Hsp_bit-score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
520 <Hsp_score>1627</Hsp_score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
521 <Hsp_evalue>0</Hsp_evalue>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
522 <Hsp_query-from>11</Hsp_query-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
523 <Hsp_query-to>338</Hsp_query-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
524 <Hsp_hit-from>1</Hsp_hit-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
525 <Hsp_hit-to>328</Hsp_hit-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
526 <Hsp_query-frame>0</Hsp_query-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
527 <Hsp_hit-frame>0</Hsp_hit-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
528 <Hsp_identity>311</Hsp_identity>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
529 <Hsp_positive>323</Hsp_positive>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
530 <Hsp_gaps>0</Hsp_gaps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
531 <Hsp_align-len>328</Hsp_align-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
532 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVS</Hsp_qseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
533 <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
534 <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T S</Hsp_midline>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
535 </Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
536 </Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
537 </Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
538 </Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
539 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
540 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
541 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
542 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
543 <Statistics_hsp-len>29</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
544 <Statistics_eff-space>101761</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
545 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
546 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
547 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
548 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
549 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
550 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
551 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
552 <Iteration_iter-num>23</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
553 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
554 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
555 <Iteration_query-len>348</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
556 <Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
557 <Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
558 <Hit_num>1</Hit_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
559 <Hit_id>gi|223523|prf||0811197A</Hit_id>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
560 <Hit_def>rhodopsin [Bos taurus]</Hit_def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
561 <Hit_accession>0811197A</Hit_accession>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
562 <Hit_len>347</Hit_len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
563 <Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
564 <Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
565 <Hsp_num>1</Hsp_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
566 <Hsp_bit-score>673.314696072569</Hsp_bit-score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
567 <Hsp_score>1736</Hsp_score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
568 <Hsp_evalue>0</Hsp_evalue>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
569 <Hsp_query-from>1</Hsp_query-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
570 <Hsp_query-to>348</Hsp_query-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
571 <Hsp_hit-from>1</Hsp_hit-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
572 <Hsp_hit-to>347</Hsp_hit-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
573 <Hsp_query-frame>0</Hsp_query-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
574 <Hsp_hit-frame>0</Hsp_hit-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
575 <Hsp_identity>324</Hsp_identity>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
576 <Hsp_positive>336</Hsp_positive>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
577 <Hsp_gaps>1</Hsp_gaps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
578 <Hsp_align-len>348</Hsp_align-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
579 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
580 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID-YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
581 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGID YT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
582 </Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
583 </Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
584 </Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
585 </Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
586 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
587 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
588 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
589 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
590 <Statistics_hsp-len>29</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
591 <Statistics_eff-space>101761</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
592 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
593 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
594 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
595 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
596 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
597 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
598 <Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
599 <Iteration_iter-num>24</Iteration_iter-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
600 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
601 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
602 <Iteration_query-len>348</Iteration_query-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
603 <Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
604 <Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
605 <Hit_num>1</Hit_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
606 <Hit_id>gi|12583665|dbj|BAB21486.1|</Hit_id>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
607 <Hit_def>fresh water form rod opsin [Conger myriaster]</Hit_def>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
608 <Hit_accession>BAB21486</Hit_accession>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
609 <Hit_len>354</Hit_len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
610 <Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
611 <Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
612 <Hsp_num>1</Hsp_num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
613 <Hsp_bit-score>599.356377496438</Hsp_bit-score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
614 <Hsp_score>1544</Hsp_score>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
615 <Hsp_evalue>3.49521227372659e-176</Hsp_evalue>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
616 <Hsp_query-from>1</Hsp_query-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
617 <Hsp_query-to>341</Hsp_query-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
618 <Hsp_hit-from>1</Hsp_hit-from>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
619 <Hsp_hit-to>342</Hsp_hit-to>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
620 <Hsp_query-frame>0</Hsp_query-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
621 <Hsp_hit-frame>0</Hsp_hit-frame>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
622 <Hsp_identity>281</Hsp_identity>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
623 <Hsp_positive>314</Hsp_positive>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
624 <Hsp_gaps>1</Hsp_gaps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
625 <Hsp_align-len>342</Hsp_align-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
626 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE</Hsp_qseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
627 <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE</Hsp_hseq>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
628 <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +D ASAT SKTE</Hsp_midline>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
629 </Hsp>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
630 </Hit_hsps>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
631 </Hit>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
632 </Iteration_hits>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
633 <Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
634 <Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
635 <Statistics_db-num>0</Statistics_db-num>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
636 <Statistics_db-len>0</Statistics_db-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
637 <Statistics_hsp-len>29</Statistics_hsp-len>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
638 <Statistics_eff-space>101761</Statistics_eff-space>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
639 <Statistics_kappa>0.041</Statistics_kappa>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
640 <Statistics_lambda>0.267</Statistics_lambda>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
641 <Statistics_entropy>0.14</Statistics_entropy>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
642 </Statistics>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
643 </Iteration_stat>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
644 </Iteration>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
645 </BlastOutput_iterations>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).
peterjc
parents:
diff changeset
646 </BlastOutput>