blast_datatypes: test-data/tblastn_four_human_vs

annotate test-data/tblastn_four_human_vs_rhodopsin.html @ 2:45ba7c750bc8 draft

This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update).

author	peterjc
date	Thu, 20 Sep 2012 10:12:43 -0400
parents
children

rev	line source
2 45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	1 <HTML>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	2 <TITLE>BLAST Search Results</TITLE>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	3 <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	4 <PRE>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	5
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	6 <b>TBLASTN 2.2.25+</b>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	7
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	8
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	9 <b>Query=</b> sp\|Q9BS26\|ERP44_HUMAN Endoplasmic reticulum resident protein 44
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	10 OS=Homo sapiens GN=ERP44 PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	11
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	12 Length=406
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	13
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	14 <b>Subject=</b> gi\|57163782\|ref\|NM_001009242.1\| Felis catus rhodopsin (RHO), mRNA
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	15
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	16 Length=1047
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	17
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	18
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	19 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	20
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	21
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	22
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	23 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	24 0.347 0.182 0.684
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	25
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	26 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	27 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	28 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	29
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	30 Effective search space used: 127710
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	31
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	32
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	33 <b>Query=</b> sp\|Q9BS26\|ERP44_HUMAN Endoplasmic reticulum resident protein 44
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	34 OS=Homo sapiens GN=ERP44 PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	35
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	36 Length=406
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	37
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	38 <b>Subject=</b> gi\|2734705\|gb\|U59921.1\|BBU59921 Bufo bufo rhodopsin mRNA, complete
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	39 cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	40
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	41 Length=1574
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	42
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	43
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	44 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	45
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	46
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	47
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	48 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	49 0.347 0.182 0.684
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	50
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	51 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	52 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	53 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	54
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	55 Effective search space used: 127710
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	56
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	57
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	58 <b>Query=</b> sp\|Q9BS26\|ERP44_HUMAN Endoplasmic reticulum resident protein 44
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	59 OS=Homo sapiens GN=ERP44 PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	60
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	61 Length=406
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	62
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	63 <b>Subject=</b> gi\|283855845\|gb\|GQ290303.1\| Cynopterus brachyotis voucher 20020434
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	64 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	65
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	66 Length=4301
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	67
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	68
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	69 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	70
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	71
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	72
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	73 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	74 0.347 0.182 0.684
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	75
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	76 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	77 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	78 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	79
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	80 Effective search space used: 127710
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	81
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	82
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	83 <b>Query=</b> sp\|Q9BS26\|ERP44_HUMAN Endoplasmic reticulum resident protein 44
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	84 OS=Homo sapiens GN=ERP44 PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	85
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	86 Length=406
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	87
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	88 <b>Subject=</b> gi\|283855822\|gb\|GQ290312.1\| Myotis ricketti voucher GQX10 rhodopsin
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	89 (RHO) mRNA, partial cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	90
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	91 Length=983
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	92
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	93
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	94 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	95
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	96
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	97
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	98 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	99 0.347 0.182 0.684
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	100
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	101 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	102 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	103 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	104
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	105 Effective search space used: 127710
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	106
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	107
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	108 <b>Query=</b> sp\|Q9BS26\|ERP44_HUMAN Endoplasmic reticulum resident protein 44
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	109 OS=Homo sapiens GN=ERP44 PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	110
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	111 Length=406
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	112
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	113 <b>Subject=</b> gi\|18148870\|dbj\|AB062417.1\| Synthetic construct Bos taurus gene for
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	114 rhodopsin, complete cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	115
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	116 Length=1047
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	117
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	118
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	119 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	120
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	121
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	122
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	123 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	124 0.347 0.182 0.684
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	125
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	126 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	127 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	128 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	129
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	130 Effective search space used: 127710
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	131
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	132
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	133 <b>Query=</b> sp\|Q9BS26\|ERP44_HUMAN Endoplasmic reticulum resident protein 44
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	134 OS=Homo sapiens GN=ERP44 PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	135
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	136 Length=406
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	137
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	138 <b>Subject=</b> gi\|12583664\|dbj\|AB043817.1\| Conger myriaster conf gene for fresh
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	139 water form rod opsin, complete cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	140
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	141 Length=1344
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	142
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	143
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	144 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	145
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	146
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	147
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	148 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	149 0.347 0.182 0.684
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	150
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	151 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	152 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	153 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	154
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	155 Effective search space used: 127710
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	156
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	157
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	158 <b>Query=</b> sp\|Q9NSY1\|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	159 GN=BMP2K PE=1 SV=2
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	160
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	161 Length=1161
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	162
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	163 <b>Subject=</b> gi\|57163782\|ref\|NM_001009242.1\| Felis catus rhodopsin (RHO), mRNA
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	164
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	165 Length=1047
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	166
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	167
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	168 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	169
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	170
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	171
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	172 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	173 0.334 0.170 0.615
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	174
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	175 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	176 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	177 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	178
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	179 Effective search space used: 370988
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	180
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	181
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	182 <b>Query=</b> sp\|Q9NSY1\|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	183 GN=BMP2K PE=1 SV=2
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	184
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	185 Length=1161
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	186
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	187 <b>Subject=</b> gi\|2734705\|gb\|U59921.1\|BBU59921 Bufo bufo rhodopsin mRNA, complete
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	188 cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	189
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	190 Length=1574
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	191
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	192
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	193 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	194
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	195
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	196
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	197 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	198 0.334 0.170 0.615
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	199
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	200 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	201 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	202 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	203
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	204 Effective search space used: 370988
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	205
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	206
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	207 <b>Query=</b> sp\|Q9NSY1\|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	208 GN=BMP2K PE=1 SV=2
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	209
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	210 Length=1161
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	211
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	212 <b>Subject=</b> gi\|283855845\|gb\|GQ290303.1\| Cynopterus brachyotis voucher 20020434
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	213 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	214
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	215 Length=4301
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	216
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	217
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	218 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	219
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	220
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	221
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	222 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	223 0.334 0.170 0.615
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	224
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	225 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	226 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	227 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	228
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	229 Effective search space used: 370988
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	230
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	231
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	232 <b>Query=</b> sp\|Q9NSY1\|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	233 GN=BMP2K PE=1 SV=2
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	234
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	235 Length=1161
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	236
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	237 <b>Subject=</b> gi\|283855822\|gb\|GQ290312.1\| Myotis ricketti voucher GQX10 rhodopsin
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	238 (RHO) mRNA, partial cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	239
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	240 Length=983
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	241
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	242
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	243 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	244
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	245
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	246
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	247 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	248 0.334 0.170 0.615
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	249
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	250 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	251 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	252 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	253
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	254 Effective search space used: 370988
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	255
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	256
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	257 <b>Query=</b> sp\|Q9NSY1\|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	258 GN=BMP2K PE=1 SV=2
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	259
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	260 Length=1161
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	261
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	262 <b>Subject=</b> gi\|18148870\|dbj\|AB062417.1\| Synthetic construct Bos taurus gene for
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	263 rhodopsin, complete cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	264
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	265 Length=1047
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	266
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	267
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	268 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	269
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	271
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	272 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	273 0.334 0.170 0.615
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	274
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	275 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	276 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	277 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	278
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	279 Effective search space used: 370988
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	280
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	281
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	282 <b>Query=</b> sp\|Q9NSY1\|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	283 GN=BMP2K PE=1 SV=2
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	284
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	285 Length=1161
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	286
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	287 <b>Subject=</b> gi\|12583664\|dbj\|AB043817.1\| Conger myriaster conf gene for fresh
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	288 water form rod opsin, complete cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	289
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	290 Length=1344
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	291
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	292
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	293 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	294
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	295
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	296
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	297 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	298 0.334 0.170 0.615
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	299
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	300 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	301 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	302 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	303
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	304 Effective search space used: 370988
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	305
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	306
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	307 <b>Query=</b> sp\|P06213\|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	308 SV=4
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	309
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	310 Length=1382
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	311
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	312 <b>Subject=</b> gi\|57163782\|ref\|NM_001009242.1\| Felis catus rhodopsin (RHO), mRNA
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	313
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	314 Length=1047
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	315
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	316
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	317 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	318
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	319
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	320
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	321 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	322 0.346 0.180 0.700
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	323
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	324 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	325 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	326 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	327
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	328 Effective search space used: 441350
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	329
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	330
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	331 <b>Query=</b> sp\|P06213\|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	332 SV=4
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	333
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	334 Length=1382
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	335
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	336 <b>Subject=</b> gi\|2734705\|gb\|U59921.1\|BBU59921 Bufo bufo rhodopsin mRNA, complete
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	337 cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	338
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	339 Length=1574
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	340
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	341
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	342 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	343
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	344
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	345
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	346 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	347 0.346 0.180 0.700
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	348
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	349 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	350 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	351 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	352
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	353 Effective search space used: 441350
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	354
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	355
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	356 <b>Query=</b> sp\|P06213\|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	357 SV=4
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	358
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	359 Length=1382
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	360
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	361 <b>Subject=</b> gi\|283855845\|gb\|GQ290303.1\| Cynopterus brachyotis voucher 20020434
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	362 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	363
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	364 Length=4301
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	365
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	366
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	367 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	368
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	369
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	370
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	371 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	372 0.346 0.180 0.700
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	373
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	374 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	375 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	376 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	377
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	378 Effective search space used: 441350
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	379
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	380
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	381 <b>Query=</b> sp\|P06213\|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	382 SV=4
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	383
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	384 Length=1382
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	385
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	386 <b>Subject=</b> gi\|283855822\|gb\|GQ290312.1\| Myotis ricketti voucher GQX10 rhodopsin
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	387 (RHO) mRNA, partial cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	388
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	389 Length=983
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	390
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	391
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	392 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	393
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	394
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	395
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	396 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	397 0.346 0.180 0.700
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	398
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	399 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	400 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	401 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	402
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	403 Effective search space used: 441350
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	404
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	405
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	406 <b>Query=</b> sp\|P06213\|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	407 SV=4
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	408
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	409 Length=1382
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	410
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	411 <b>Subject=</b> gi\|18148870\|dbj\|AB062417.1\| Synthetic construct Bos taurus gene for
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	412 rhodopsin, complete cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	413
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	414 Length=1047
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	415
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	416
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	417 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	418
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	419
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	420
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	421 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	422 0.346 0.180 0.700
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	423
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	424 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	425 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	426 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	427
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	428 Effective search space used: 441350
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	429
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	430
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	431 <b>Query=</b> sp\|P06213\|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	432 SV=4
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	433
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	434 Length=1382
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	435
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	436 <b>Subject=</b> gi\|12583664\|dbj\|AB043817.1\| Conger myriaster conf gene for fresh
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	437 water form rod opsin, complete cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	438
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	439 Length=1344
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	440
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	441
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	442 *** No hits found ***
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	443
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	444
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	445
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	446 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	447 0.346 0.180 0.700
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	448
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	449 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	450 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	451 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	452
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	453 Effective search space used: 441350
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	454
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	455
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	456 <b>Query=</b> sp\|P08100\|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	457
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	458 Length=348
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	459
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	460 <b>Subject=</b> gi\|57163782\|ref\|NM_001009242.1\| Felis catus rhodopsin (RHO), mRNA
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	461
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	462 Length=1047
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	463
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	464 <script src="blastResult.js"></script>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	465 Score = 732 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	466 Identities = 336/348 (97%), Positives = 343/348 (99%), Gaps = 0/348 (0%)
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	467 Frame = +1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	468
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	469 Query 1 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 60
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	470 MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	471 Sbjct 1 MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 180
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	472
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	473 Query 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	474 VTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLG
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	475 Sbjct 181 VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG 360
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	476
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	477 Query 121 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 180
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	478 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIP
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	479 Sbjct 361 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP 540
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	480
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	481 Query 181 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 240
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	482 EG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQES
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	483 Sbjct 541 EGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQES 720
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	484
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	485 Query 241 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 300
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	486 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++I
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	487 Sbjct 721 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSI 900
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	488
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	489 Query 301 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA 348
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	490 YNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	491 Sbjct 901 YNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA 1044
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	492
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	493
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	494
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	495 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	496 0.351 0.182 0.707
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	497
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	498 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	499 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	500 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	501
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	502 Effective search space used: 109230
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	503
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	504
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	505 <b>Query=</b> sp\|P08100\|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	506
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	507 Length=348
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	508
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	509 <b>Subject=</b> gi\|2734705\|gb\|U59921.1\|BBU59921 Bufo bufo rhodopsin mRNA, complete
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	510 cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	511
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	512 Length=1574
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	513
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	514 <script src="blastResult.js"></script>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	515 Score = 646 bits (1489), Expect = 0.0, Method: Compositional matrix adjust.
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	516 Identities = 290/342 (85%), Positives = 320/342 (94%), Gaps = 1/342 (0%)
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	517 Frame = +3
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	518
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	519 Query 1 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 60
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	520 MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLY
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	521 Sbjct 42 MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLY 221
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	522
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	523 Query 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	524 VT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S+ GYF+ G TGC +EGFFATLG
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	525 Sbjct 222 VTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLG 401
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	526
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	527 Query 121 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 180
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	528 GEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIP
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	529 Sbjct 402 GEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIP 581
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	530
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	531 Query 181 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 240
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	532 EG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQES
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	533 Sbjct 582 EGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQES 761
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	534
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	535 Query 241 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 300
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	536 ATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF+ QGS FGPIFMT+PAFFAKS++I
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	537 Sbjct 762 ATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSI 941
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	538
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	539 Query 301 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE 341
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	540 YNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	541 Sbjct 942 YNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE 1067
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	542
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	543
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	544
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	545 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	546 0.351 0.182 0.707
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	547
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	548 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	549 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	550 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	551
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	552 Effective search space used: 109230
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	553
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	554
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	555 <b>Query=</b> sp\|P08100\|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	556
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	557 Length=348
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	558
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	559 <b>Subject=</b> gi\|283855845\|gb\|GQ290303.1\| Cynopterus brachyotis voucher 20020434
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	560 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	561
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	562 Length=4301
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	563
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	564 <script src="blastResult.js"></script>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	565 Score = 151 bits (342), Expect(2) = 1e-72, Method: Compositional matrix adjust.
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	566 Identities = 69/74 (94%), Positives = 73/74 (99%), Gaps = 0/74 (0%)
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	567 Frame = +3
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	568
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	569 Query 239 ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSA 298
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	570 ESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS+
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	571 Sbjct 3147 ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSS 3326
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	572
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	573 Query 299 AIYNPVIYIMMNKQ 312
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	574 +IYNPVIYIMMNKQ
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	575 Sbjct 3327 SIYNPVIYIMMNKQ 3368
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	576
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	577
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	578 Score = 126 bits (284), Expect(2) = 1e-72, Method: Compositional matrix adjust.
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	579 Identities = 54/59 (92%), Positives = 57/59 (97%), Gaps = 0/59 (0%)
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	580 Frame = +2
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	581
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	582 Query 177 RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA 235
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	583 RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE +
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	584 Sbjct 2855 RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS 3031
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	585
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	586
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	587 Score = 229 bits (523), Expect = 1e-64, Method: Compositional matrix adjust.
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	588 Identities = 107/111 (97%), Positives = 109/111 (99%), Gaps = 0/111 (0%)
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	589 Frame = +1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	590
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	591 Query 11 VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT 70
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	592 VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	593 Sbjct 1 VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT 180
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	594
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	595 Query 71 PLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG 121
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	596 PLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	597 Sbjct 181 PLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG 333
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	598
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	599
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	600 Score = 122 bits (276), Expect = 1e-32, Method: Compositional matrix adjust.
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	601 Identities = 55/59 (94%), Positives = 56/59 (95%), Gaps = 0/59 (0%)
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	602 Frame = +3
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	603
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	604 Query 119 LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR 177
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	605 L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	606 Sbjct 1404 LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR 1580
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	607
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	608
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	609 Score = 57.7 bits (125), Expect = 6e-13, Method: Compositional matrix adjust.
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	610 Identities = 23/26 (89%), Positives = 24/26 (93%), Gaps = 0/26 (0%)
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	611 Frame = +1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	612
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	613 Query 312 QFRNCMLTTICCGKNPLGDDEASATV 337
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	614 QFRNCMLTT+CCGKNPLGDDEAS T
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	615 Sbjct 4222 QFRNCMLTTLCCGKNPLGDDEASTTA 4299
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	616
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	617
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	618
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	619 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	620 0.351 0.182 0.707
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	621
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	622 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	623 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	624 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	625
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	626 Effective search space used: 109230
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	627
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	628
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	629 <b>Query=</b> sp\|P08100\|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	630
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	631 Length=348
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	632
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	633 <b>Subject=</b> gi\|283855822\|gb\|GQ290312.1\| Myotis ricketti voucher GQX10 rhodopsin
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	634 (RHO) mRNA, partial cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	635
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	636 Length=983
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	637
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	638 <script src="blastResult.js"></script>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	639 Score = 658 bits (1517), Expect = 0.0, Method: Compositional matrix adjust.
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	640 Identities = 310/326 (96%), Positives = 322/326 (99%), Gaps = 0/326 (0%)
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	641 Frame = +1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	642
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	643 Query 11 VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT 70
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	644 VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	645 Sbjct 1 VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT 180
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	646
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	647 Query 71 PLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVV 130
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	648 PLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVV
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	649 Sbjct 181 PLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVV 360
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	650
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	651 Query 131 LAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGID 190
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	652 LAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGID
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	653 Sbjct 361 LAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGID 540
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	654
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	655 Query 191 YYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEV 250
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	656 YYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEV
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	657 Sbjct 541 YYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEV 720
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	658
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	659 Query 251 TRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMN 310
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	660 TRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMN
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	661 Sbjct 721 TRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMN 900
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	662
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	663 Query 311 KQFRNCMLTTICCGKNPLGDDEASAT 336
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	664 KQFRNCMLTT+CCGKNPLGDDEAS T
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	665 Sbjct 901 KQFRNCMLTTLCCGKNPLGDDEASTT 978
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	666
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	667
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	668
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	669 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	670 0.351 0.182 0.707
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	671
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	672 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	673 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	674 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	675
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	676 Effective search space used: 109230
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	677
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	678
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	679 <b>Query=</b> sp\|P08100\|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	680
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	681 Length=348
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	682
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	683 <b>Subject=</b> gi\|18148870\|dbj\|AB062417.1\| Synthetic construct Bos taurus gene for
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	684 rhodopsin, complete cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	685
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	686 Length=1047
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	687
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	688 <script src="blastResult.js"></script>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	689 Score = 711 bits (1640), Expect = 0.0, Method: Compositional matrix adjust.
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	690 Identities = 325/348 (94%), Positives = 337/348 (97%), Gaps = 0/348 (0%)
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	691 Frame = +1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	692
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	693 Query 1 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 60
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	694 MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLY
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	695 Sbjct 1 MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLY 180
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	696
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	697 Query 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	698 VTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLG
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	699 Sbjct 181 VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG 360
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	700
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	701 Query 121 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 180
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	702 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIP
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	703 Sbjct 361 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP 540
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	704
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	705 Query 181 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 240
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	706 EG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQES
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	707 Sbjct 541 EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES 720
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	708
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	709 Query 241 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 300
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	710 ATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	711 Sbjct 721 ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAV 900
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	712
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	713 Query 301 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA 348
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	714 YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	715 Sbjct 901 YNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA 1044
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	716
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	717
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	718
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	719 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	720 0.351 0.182 0.707
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	721
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	722 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	723 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	724 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	725
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	726 Effective search space used: 109230
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	727
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	728
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	729 <b>Query=</b> sp\|P08100\|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	730
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	731 Length=348
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	732
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	733 <b>Subject=</b> gi\|12583664\|dbj\|AB043817.1\| Conger myriaster conf gene for fresh
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	734 water form rod opsin, complete cds
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	735
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	736 Length=1344
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	737
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	738 <script src="blastResult.js"></script>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	739 Score = 626 bits (1444), Expect = 0.0, Method: Compositional matrix adjust.
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	740 Identities = 281/342 (83%), Positives = 311/342 (91%), Gaps = 1/342 (0%)
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	741 Frame = +2
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	742
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	743 Query 1 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 60
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	744 MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLY
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	745 Sbjct 23 MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLY 202
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	746
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	747 Query 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	748 VT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLG
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	749 Sbjct 203 VTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLG 382
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	750
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	751 Query 121 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 180
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	752 GEIALW LVVLAIER++VVCKP++NFRFGE HAIMGV TW MALACA PPL GWSRYIP
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	753 Sbjct 383 GEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIP 562
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	754
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	755 Query 181 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 240
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	756 EGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	757 Sbjct 563 EGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQES 742
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	758
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	759 Query 241 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 300
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	760 TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA YIFTHQGS FGPIFMTIP+FFAKS+A+
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	761 Sbjct 743 ETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSAL 922
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	762
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	763 Query 301 YNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE 341
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	764 YNP+IYI MNKQFR CM+TT+CCGKNP +D ASAT SKTE
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	765 Sbjct 923 YNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE 1048
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	766
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	767
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	768
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	769 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	770 0.351 0.182 0.707
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	771
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	772 Gapped
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	773 Lambda K H
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	774 0.299 0.0710 0.270
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	775
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	776 Effective search space used: 109230
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	777
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	778
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	779
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	780
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	781 Matrix: BLOSUM80
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	782 Gap Penalties: Existence: 10, Extension: 1
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	783 Neighboring words threshold: 14
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	784 Window for multiple hits: 25
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	785 </PRE>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	786 </BODY>
45ba7c750bc8 This update should have no functional effect. Renamed files (since xml.py will be inaccurate once BLAST databases are added in future update). peterjc parents: diff changeset	787 </HTML>

Mercurial > repos > devteam > blast_datatypes

annotate test-data/tblastn_four_human_vs_rhodopsin.html @ 2:45ba7c750bc8 draft