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1 chromosome length information read. chromNum = 49!
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2 config file read.
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3 fragmentSize = 200
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4 isStrandSensitiveMode = 0
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5 slidingWinSize = 1000
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6 movingStep = 50
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7 outputNum = 100000
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8 minCount = 4
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9 minScore = 5.000000
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10 bootstrapPass = 50
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11 randSeed = 123456
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12 reading tag files......
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13 10000 tags in L1, 10000 tags in L2.
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14 tag file read.
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15 pre-processing......
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16 pre-processing finished.
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17 estimating noise rate......
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18 not enough reads for noise rate estimation.
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19 noise rate estimation failed. noise rate set to be 1.0
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20 noise rate = 1.000000
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21 peak-finding......
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22 chr1......673 candidate peaks.
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23 chr1_random......0 candidate peaks.
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24 chr10......0 candidate peaks.
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25 chr10_random......0 candidate peaks.
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26 chr11......0 candidate peaks.
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27 chr11_random......0 candidate peaks.
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28 chr12......0 candidate peaks.
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29 chr13......0 candidate peaks.
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30 chr13_random......0 candidate peaks.
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31 chr14......0 candidate peaks.
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32 chr15......0 candidate peaks.
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33 chr15_random......0 candidate peaks.
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34 chr16......0 candidate peaks.
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35 chr16_random......0 candidate peaks.
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36 chr17......0 candidate peaks.
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37 chr17_random......0 candidate peaks.
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38 chr18......0 candidate peaks.
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39 chr18_random......0 candidate peaks.
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40 chr19......0 candidate peaks.
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41 chr19_random......0 candidate peaks.
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42 chr2......0 candidate peaks.
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43 chr2_random......0 candidate peaks.
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44 chr20......0 candidate peaks.
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45 chr21......0 candidate peaks.
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46 chr21_random......0 candidate peaks.
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47 chr22......0 candidate peaks.
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48 chr22_random......0 candidate peaks.
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49 chr22_h2_hap1......0 candidate peaks.
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50 chr3......0 candidate peaks.
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51 chr3_random......0 candidate peaks.
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52 chr4......0 candidate peaks.
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53 chr4_random......0 candidate peaks.
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54 chr5......0 candidate peaks.
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55 chr5_random......0 candidate peaks.
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56 chr5_h2_hap1......0 candidate peaks.
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57 chr6......0 candidate peaks.
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58 chr6_random......0 candidate peaks.
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59 chr6_cox_hap1......0 candidate peaks.
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60 chr6_qbl_hap2......0 candidate peaks.
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61 chr7......0 candidate peaks.
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62 chr7_random......0 candidate peaks.
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63 chr8......0 candidate peaks.
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64 chr8_random......0 candidate peaks.
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65 chr9......0 candidate peaks.
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66 chr9_random......0 candidate peaks.
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67 chrM......0 candidate peaks.
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68 chrX......0 candidate peaks.
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69 chrX_random......0 candidate peaks.
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70 chrY......0 candidate peaks.
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71 peak-finding finished.
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72 Significance Analysis......
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73 estimating paramters......
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74 smoothing factor = 0.287387
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75 estimating local FDR.....
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76 FDR at the threshold 5.000000 is 0.999000. You may want to adjust the threshold by inspecting the output files.
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77 post-processing......
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78 chr1......finished.
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79 chr1_random......finished.
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80 chr10......finished.
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81 chr10_random......finished.
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82 chr11......finished.
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83 chr11_random......finished.
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84 chr12......finished.
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85 chr13......finished.
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86 chr13_random......finished.
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87 chr14......finished.
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88 chr15......finished.
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89 chr15_random......finished.
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90 chr16......finished.
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91 chr16_random......finished.
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92 chr17......finished.
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93 chr17_random......finished.
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94 chr18......finished.
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95 chr18_random......finished.
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96 chr19......finished.
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97 chr19_random......finished.
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98 chr2......finished.
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99 chr2_random......finished.
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100 chr20......finished.
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101 chr21......finished.
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102 chr21_random......finished.
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103 chr22......finished.
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104 chr22_random......finished.
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105 chr22_h2_hap1......finished.
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106 chr3......finished.
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107 chr3_random......finished.
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108 chr4......finished.
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109 chr4_random......finished.
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110 chr5......finished.
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111 chr5_random......finished.
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112 chr5_h2_hap1......finished.
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113 chr6......finished.
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114 chr6_random......finished.
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115 chr6_cox_hap1......finished.
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116 chr6_qbl_hap2......finished.
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117 chr7......finished.
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118 chr7_random......finished.
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119 chr8......finished.
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120 chr8_random......finished.
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121 chr9......finished.
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122 chr9_random......finished.
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123 chrM......finished.
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124 chrX......finished.
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125 chrX_random......finished.
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126 chrY......finished.
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127 post-processing finished.
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128 Significance analysis finished.
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129 saving results.......
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130 results saved.
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131 CCAT process completed!
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