Mercurial > repos > devteam > data_manager_gatk_picard_index_builder

comparison data_manager_conf.xml @ 0:619dd9e9c09c draft

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Imported from capsule None
author devteam
date Tue, 01 Apr 2014 10:48:03 -0400
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children 9a40272f56d0
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-1:000000000000 0:619dd9e9c09c
1 <?xml version="1.0"?>
2 <data_managers>
3 <data_manager tool_file="data_manager/data_manager_gatk_picard_index_builder.xml" id="gatk_picard_index_builder" version="0.0.1">
4 <data_table name="gatk_picard_indexes">
5 <output>
6 <column name="value" />
7 <column name="dbkey" />
8 <column name="name" />
9 <column name="path" output_ref="out_file" >
10 <move type="directory" relativize_symlinks="True">
11 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/gatk_picard_index/${value}</target>
13 </move>
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/gatk_picard_index/${value}/${path}</value_translation>
15 <value_translation type="function">abspath</value_translation>
16 </column>
17 </output>
18 </data_table>
19 </data_manager>
20 </data_managers>