Mercurial > repos > devteam > data_manager_sam_fasta_index_builder
annotate data_manager_conf.xml @ 10:a256278e5bff draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sam_fasta_index_builder commit 09b56ef3e09ad6c5923c88616fea5cbd77d87616
| author | iuc |
|---|---|
| date | Mon, 18 Dec 2023 09:37:01 +0000 |
| parents | ad90c2da4f38 |
| children |
| rev | line source |
|---|---|
| 0 | 1 <?xml version="1.0"?> |
| 2 <data_managers> | |
| 3 | |
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ad90c2da4f38
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sam_fasta_index_builder commit 096286097ed5cdf189a1b68c3fc34d10f4142e54
iuc
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0
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changeset
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4 <data_manager tool_file="data_manager/data_manager_sam_fasta_index_builder.xml" id="sam_fasta_index_builder"> |
| 0 | 5 <data_table name="fasta_indexes"> |
| 6 <output> | |
| 7 <column name="value" /> | |
| 8 <column name="dbkey" /> | |
| 9 <column name="name" /> | |
| 10 <column name="path" output_ref="out_file" > | |
| 11 <move type="directory" relativize_symlinks="True"> | |
| 12 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> | |
| 13 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/sam_indexes/${value}</target> | |
| 14 </move> | |
| 15 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/sam_indexes/${value}/${path}</value_translation> | |
| 16 <value_translation type="function">abspath</value_translation> | |
| 17 </column> | |
| 18 </output> | |
| 19 </data_table> | |
| 20 </data_manager> | |
| 21 | |
| 22 </data_managers> |