Mercurial > repos > devteam > kraken_report
diff tool-data/kraken_databases.loc.sample @ 6:1902d3de4a4f draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tool_collections/kraken/ commit 06345505a91f3dcfa8a37dceb6f25e95806dddc8"
| author | iuc |
|---|---|
| date | Wed, 04 Dec 2019 06:52:03 -0500 |
| parents | f2757ab26483 |
| children |
line wrap: on
line diff
--- a/tool-data/kraken_databases.loc.sample Thu Sep 13 09:45:15 2018 -0400 +++ b/tool-data/kraken_databases.loc.sample Wed Dec 04 06:52:03 2019 -0500 @@ -0,0 +1,18 @@ +# Expect three columns, tab separated, as follows: +# - value (Galaxy records this in the Galaxy DB) +# - name (Galaxy shows this in the UI) +# - path (folder name containing the Kraken DB) +# +# e.g. +# plants2018<tab>Plant genomes (2018)<tab>/path/to/krakenDB/plants_2018 +# +# For backward compatibility the Kraken wrapper also accepts: +# - value (Galaxy records this in the Galaxy DB) +# - name (Final part of folder name, Galaxy shows this in the UI) +# - path (Parent folder name, where $path/$name contains the Kraken DB) +# +# e.g. +# plants2018<tab>plants_2018<tab>/path/to/krakenDB +# +# Please avoid this legacy usage, as not all tools using +# the kraken_databases.loc file will understand it.