Mercurial > repos > devteam > microsatellite_birthdeath
diff test-data/regVariation/microsatellite/Galaxy17_short_raw.txt @ 0:4e31fad3f08e draft
Uploaded tool tarball.
author | devteam |
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date | Wed, 25 Sep 2013 11:26:02 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/regVariation/microsatellite/Galaxy17_short_raw.txt Wed Sep 25 11:26:02 2013 -0400 @@ -0,0 +1,5 @@ +>rheMac2 1 hg18 chr22 16115000 16115212 panTro2 chr22 16131432 16131644 ponAbe2 chr22 13834301 13834513 rheMac2 chr10 61914657 61914870 calJac1 Contig13114 14954 15124 mononucleotide A 1 198 + 206 aaaaaaaaa +>calJac1 4 hg18 chr22 16118223 16119141 panTro2 chr22 16134653 16135572 ponAbe2 chr22 13837634 13838553 rheMac2 chr10 61918520 61919424 calJac1 Contig13114 15842 16747 tetranucleotide AAAC 1 182 + 193 AAACAAACAAAC +>hg18 4 hg18 chr22 16118223 16119141 panTro2 chr22 16134653 16135572 ponAbe2 chr22 13837634 13838553 rheMac2 chr10 61918520 61919424 calJac1 Contig13114 15842 16747 mononucleotide T 7 568 + 577 TTTTTTTTTT >panTro2 4 hg18 chr22 16118223 16119141 panTro2 chr22 16134653 16135572 ponAbe2 chr22 13837634 13838553 rheMac2 chr10 61918520 61919424 calJac1 Contig13114 15842 16747 mononucleotide T 6 568 + 577 TTTTTTTTTT >ponAbe2 4 hg18 chr22 16118223 16119141 panTro2 chr22 16134653 16135572 ponAbe2 chr22 13837634 13838553 rheMac2 chr10 61918520 61919424 calJac1 Contig13114 15842 16747 mononucleotide T 5 568 + 576 TTTTTTTTT >rheMac2 4 hg18 chr22 16118223 16119141 panTro2 chr22 16134653 16135572 ponAbe2 chr22 13837634 13838553 rheMac2 chr10 61918520 61919424 calJac1 Contig13114 15842 16747 mononucleotide T 22 568 + 579 TTTTTTTTTTTT +>ponAbe2 4 hg18 chr22 16118223 16119141 panTro2 chr22 16134653 16135572 ponAbe2 chr22 13837634 13838553 rheMac2 chr10 61918520 61919424 calJac1 Contig13114 15842 16747 tetranucleotide GAGG 8 821 + 833 GAGGGAGGGAGGG +>hg18 5 hg18 chr22 16119141 16119363 panTro2 chr22 16135572 16135794 ponAbe2 chr22 13838553 13838774 rheMac2 chr10 61919424 61919654 calJac1 Contig13114 16747 16966 dinucleotide [TC][TC] 0 21 + 34 [TCT]G[TCTCTCTCTC] indel/deletion G 4 1 >panTro2 5 hg18 chr22 16119141 16119363 panTro2 chr22 16135572 16135794 ponAbe2 chr22 13838553 13838774 rheMac2 chr10 61919424 61919654 calJac1 Contig13114 16747 16966 dinucleotide [TC][TC] 0 21 + 34 [TCT]G[TCTCTCTCTC] indel/deletion G 4 1 >ponAbe2 5 hg18 chr22 16119141 16119363 panTro2 chr22 16135572 16135794 ponAbe2 chr22 13838553 13838774 rheMac2 chr10 61919424 61919654 calJac1 Contig13114 16747 16966 dinucleotide [TC][TC] 0 21 + 34 [TCT]G[TCTCTCTCTC] indel/deletion G 4 1 >rheMac2 5 hg18 chr22 16119141 16119363 panTro2 chr22 16135572 16135794 ponAbe2 chr22 13838553 13838774 rheMac2 chr10 61919424 61919654 calJac1 Contig13114 16747 16966 dinucleotide [TC][TC] 0 21 + 34 [TCT]G[TCTCTCTCTC] indel/deletion G 4 1 >calJac1 5 hg18 chr22 16119141 16119363 panTro2 chr22 16135572 16135794 ponAbe2 chr22 13838553 13838774 rheMac2 chr10 61919424 61919654 calJac1 Contig13114 16747 16966 dinucleotide [TC][TC] 0 21 + 34 [TCT]G[TCTCTCTCTC] indel/deletion G 4 1