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view test-data/regVariation/microsatellite/Galaxy17_short_raw.txt @ 0:4e31fad3f08e draft

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author devteam
date Wed, 25 Sep 2013 11:26:02 -0400
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>rheMac2	1	hg18	chr22	16115000	16115212	panTro2	chr22	16131432	16131644	ponAbe2	chr22	13834301	13834513	rheMac2	chr10	61914657	61914870	calJac1	Contig13114	14954	15124	mononucleotide	A	1	198	+	206	aaaaaaaaa
>calJac1	4	hg18	chr22	16118223	16119141	panTro2	chr22	16134653	16135572	ponAbe2	chr22	13837634	13838553	rheMac2	chr10	61918520	61919424	calJac1	Contig13114	15842	16747	tetranucleotide	AAAC	1	182	+	193	AAACAAACAAAC
>hg18	4	hg18	chr22	16118223	16119141	panTro2	chr22	16134653	16135572	ponAbe2	chr22	13837634	13838553	rheMac2	chr10	61918520	61919424	calJac1	Contig13114	15842	16747	mononucleotide	T	7	568	+	577	TTTTTTTTTT	>panTro2	4	hg18	chr22	16118223	16119141	panTro2	chr22	16134653	16135572	ponAbe2	chr22	13837634	13838553	rheMac2	chr10	61918520	61919424	calJac1	Contig13114	15842	16747	mononucleotide	T	6	568	+	577	TTTTTTTTTT	>ponAbe2	4	hg18	chr22	16118223	16119141	panTro2	chr22	16134653	16135572	ponAbe2	chr22	13837634	13838553	rheMac2	chr10	61918520	61919424	calJac1	Contig13114	15842	16747	mononucleotide	T	5	568	+	576	TTTTTTTTT	>rheMac2	4	hg18	chr22	16118223	16119141	panTro2	chr22	16134653	16135572	ponAbe2	chr22	13837634	13838553	rheMac2	chr10	61918520	61919424	calJac1	Contig13114	15842	16747	mononucleotide	T	22	568	+	579	TTTTTTTTTTTT
>ponAbe2	4	hg18	chr22	16118223	16119141	panTro2	chr22	16134653	16135572	ponAbe2	chr22	13837634	13838553	rheMac2	chr10	61918520	61919424	calJac1	Contig13114	15842	16747	tetranucleotide	GAGG	8	821	+	833	GAGGGAGGGAGGG
>hg18	5	hg18	chr22	16119141	16119363	panTro2	chr22	16135572	16135794	ponAbe2	chr22	13838553	13838774	rheMac2	chr10	61919424	61919654	calJac1	Contig13114	16747	16966	dinucleotide	[TC][TC]	0	21	+	34	[TCT]G[TCTCTCTCTC]	indel/deletion	G	4	1	>panTro2	5	hg18	chr22	16119141	16119363	panTro2	chr22	16135572	16135794	ponAbe2	chr22	13838553	13838774	rheMac2	chr10	61919424	61919654	calJac1	Contig13114	16747	16966	dinucleotide	[TC][TC]	0	21	+	34	[TCT]G[TCTCTCTCTC]	indel/deletion	G	4	1	>ponAbe2	5	hg18	chr22	16119141	16119363	panTro2	chr22	16135572	16135794	ponAbe2	chr22	13838553	13838774	rheMac2	chr10	61919424	61919654	calJac1	Contig13114	16747	16966	dinucleotide	[TC][TC]	0	21	+	34	[TCT]G[TCTCTCTCTC]	indel/deletion	G	4	1	>rheMac2	5	hg18	chr22	16119141	16119363	panTro2	chr22	16135572	16135794	ponAbe2	chr22	13838553	13838774	rheMac2	chr10	61919424	61919654	calJac1	Contig13114	16747	16966	dinucleotide	[TC][TC]	0	21	+	34	[TCT]G[TCTCTCTCTC]	indel/deletion	G	4	1	>calJac1	5	hg18	chr22	16119141	16119363	panTro2	chr22	16135572	16135794	ponAbe2	chr22	13838553	13838774	rheMac2	chr10	61919424	61919654	calJac1	Contig13114	16747	16966	dinucleotide	[TC][TC]	0	21	+	34	[TCT]G[TCTCTCTCTC]	indel/deletion	G	4	1