Mercurial > repos > devteam > ncbi_blast_plus

annotate test-data/segmasker_four_human.maskinfo-asn1 @ 14:2fe07f50a41e draft

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Uploaded v0.1.01 - Requires blastdbd datatype (blast_datatypes v0.0.19). Support for makeprofiledb to create protein domain databases and use them in RPS-BLAST and RPS-TBLASTN. Tools now support GI and SeqID filters, and embed the citations.
author peterjc
date Mon, 01 Dec 2014 05:59:16 -0500
parents 623f727cdff1
children
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13
623f727cdff1 Uploaded v0.1.00, uses BLAST+ 2.2.29, allows custom column selection for tabular output - including taxonomy fields.
peterjc
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1 Blast-db-mask-info ::= {
623f727cdff1 Uploaded v0.1.00, uses BLAST+ 2.2.29, allows custom column selection for tabular output - including taxonomy fields.
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2 algo-id 1,
623f727cdff1 Uploaded v0.1.00, uses BLAST+ 2.2.29, allows custom column selection for tabular output - including taxonomy fields.
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3 algo-program seg,
623f727cdff1 Uploaded v0.1.00, uses BLAST+ 2.2.29, allows custom column selection for tabular output - including taxonomy fields.
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4 algo-options "window=12; locut=2.2; hicut=2.5",
623f727cdff1 Uploaded v0.1.00, uses BLAST+ 2.2.29, allows custom column selection for tabular output - including taxonomy fields.
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5 masks {
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6 masks {
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7 int {
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10 id local id 1
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11 },
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12 packed-int {
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16 id local id 2
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623f727cdff1 Uploaded v0.1.00, uses BLAST+ 2.2.29, allows custom column selection for tabular output - including taxonomy fields.
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peterjc
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peterjc
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peterjc
parents:
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112 more FALSE
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parents:
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113 }
623f727cdff1 Uploaded v0.1.00, uses BLAST+ 2.2.29, allows custom column selection for tabular output - including taxonomy fields.
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114 }