view test-data/segmasker_four_human.maskinfo-asn1 @ 14:2fe07f50a41e draft

Uploaded v0.1.01 - Requires blastdbd datatype (blast_datatypes v0.0.19). Support for makeprofiledb to create protein domain databases and use them in RPS-BLAST and RPS-TBLASTN. Tools now support GI and SeqID filters, and embed the citations.
author peterjc
date Mon, 01 Dec 2014 05:59:16 -0500
parents 623f727cdff1
children
line wrap: on
line source

Blast-db-mask-info ::= {
  algo-id 1,
  algo-program seg,
  algo-options "window=12; locut=2.2; hicut=2.5",
  masks {
    masks {
      int {
        from 6,
        to 18,
        id local id 1
      },
      packed-int {
        {
          from 11,
          to 46,
          id local id 2
        },
        {
          from 325,
          to 332,
          id local id 2
        },
        {
          from 421,
          to 443,
          id local id 2
        },
        {
          from 437,
          to 450,
          id local id 2
        },
        {
          from 447,
          to 496,
          id local id 2
        },
        {
          from 501,
          to 516,
          id local id 2
        },
        {
          from 536,
          to 554,
          id local id 2
        },
        {
          from 545,
          to 558,
          id local id 2
        },
        {
          from 636,
          to 648,
          id local id 2
        },
        {
          from 737,
          to 762,
          id local id 2
        },
        {
          from 789,
          to 806,
          id local id 2
        },
        {
          from 970,
          to 983,
          id local id 2
        },
        {
          from 999,
          to 1010,
          id local id 2
        }
      },
      packed-int {
        {
          from 3,
          to 26,
          id local id 3
        },
        {
          from 372,
          to 390,
          id local id 3
        },
        {
          from 766,
          to 782,
          id local id 3
        },
        {
          from 780,
          to 791,
          id local id 3
        },
        {
          from 1312,
          to 1324,
          id local id 3
        }
      },
      int {
        from 230,
        to 246,
        id local id 4
      }
    },
    more FALSE
  }
}