Mercurial > repos > devteam > ncbi_blast_plus
comparison test-data/tblastn_four_human_vs_rhodopsin.html @ 11:4c4a0da938ff draft
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
Supports $GALAXY_SLOTS.
Includes more tests and heavy use of macros.
author | peterjc |
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date | Thu, 05 Dec 2013 06:55:59 -0500 |
parents | 1f546099212f |
children | 623f727cdff1 |
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10:70e7dcbf6573 | 11:4c4a0da938ff |
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1 <HTML> | 1 <HTML> |
2 <TITLE>BLAST Search Results</TITLE> | 2 <TITLE>BLAST Search Results</TITLE> |
3 <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099"> | 3 <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099"> |
4 <PRE> | 4 <PRE> |
5 | 5 |
6 <b>TBLASTN 2.2.26+</b> | 6 <b>TBLASTN 2.2.28+</b> |
7 | 7 |
8 | 8 |
9 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 | 9 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
10 OS=Homo sapiens GN=ERP44 PE=1 SV=1 | 10 OS=Homo sapiens GN=ERP44 PE=1 SV=1 |
11 | 11 |
18 | 18 |
19 ***** No hits found ***** | 19 ***** No hits found ***** |
20 | 20 |
21 | 21 |
22 | 22 |
23 Lambda K H | 23 Lambda K H a alpha |
24 0.347 0.182 0.684 | 24 0.347 0.182 0.684 0.522 1.92 |
25 | 25 |
26 Gapped | 26 Gapped |
27 Lambda K H | 27 Lambda K H a alpha sigma |
28 0.299 0.0710 0.270 | 28 0.299 0.0710 0.270 1.10 13.8 14.5 |
29 | 29 |
30 Effective search space used: 127710 | 30 Effective search space used: 127710 |
31 | 31 |
32 | 32 |
33 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 | 33 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
43 | 43 |
44 ***** No hits found ***** | 44 ***** No hits found ***** |
45 | 45 |
46 | 46 |
47 | 47 |
48 Lambda K H | 48 Lambda K H a alpha |
49 0.347 0.182 0.684 | 49 0.347 0.182 0.684 0.522 1.92 |
50 | 50 |
51 Gapped | 51 Gapped |
52 Lambda K H | 52 Lambda K H a alpha sigma |
53 0.299 0.0710 0.270 | 53 0.299 0.0710 0.270 1.10 13.8 14.5 |
54 | 54 |
55 Effective search space used: 127710 | 55 Effective search space used: 127710 |
56 | 56 |
57 | 57 |
58 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 | 58 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
68 | 68 |
69 ***** No hits found ***** | 69 ***** No hits found ***** |
70 | 70 |
71 | 71 |
72 | 72 |
73 Lambda K H | 73 Lambda K H a alpha |
74 0.347 0.182 0.684 | 74 0.347 0.182 0.684 0.522 1.92 |
75 | 75 |
76 Gapped | 76 Gapped |
77 Lambda K H | 77 Lambda K H a alpha sigma |
78 0.299 0.0710 0.270 | 78 0.299 0.0710 0.270 1.10 13.8 14.5 |
79 | 79 |
80 Effective search space used: 127710 | 80 Effective search space used: 127710 |
81 | 81 |
82 | 82 |
83 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 | 83 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
93 | 93 |
94 ***** No hits found ***** | 94 ***** No hits found ***** |
95 | 95 |
96 | 96 |
97 | 97 |
98 Lambda K H | 98 Lambda K H a alpha |
99 0.347 0.182 0.684 | 99 0.347 0.182 0.684 0.522 1.92 |
100 | 100 |
101 Gapped | 101 Gapped |
102 Lambda K H | 102 Lambda K H a alpha sigma |
103 0.299 0.0710 0.270 | 103 0.299 0.0710 0.270 1.10 13.8 14.5 |
104 | 104 |
105 Effective search space used: 127710 | 105 Effective search space used: 127710 |
106 | 106 |
107 | 107 |
108 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 | 108 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
118 | 118 |
119 ***** No hits found ***** | 119 ***** No hits found ***** |
120 | 120 |
121 | 121 |
122 | 122 |
123 Lambda K H | 123 Lambda K H a alpha |
124 0.347 0.182 0.684 | 124 0.347 0.182 0.684 0.522 1.92 |
125 | 125 |
126 Gapped | 126 Gapped |
127 Lambda K H | 127 Lambda K H a alpha sigma |
128 0.299 0.0710 0.270 | 128 0.299 0.0710 0.270 1.10 13.8 14.5 |
129 | 129 |
130 Effective search space used: 127710 | 130 Effective search space used: 127710 |
131 | 131 |
132 | 132 |
133 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 | 133 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
143 | 143 |
144 ***** No hits found ***** | 144 ***** No hits found ***** |
145 | 145 |
146 | 146 |
147 | 147 |
148 Lambda K H | 148 Lambda K H a alpha |
149 0.347 0.182 0.684 | 149 0.347 0.182 0.684 0.522 1.92 |
150 | 150 |
151 Gapped | 151 Gapped |
152 Lambda K H | 152 Lambda K H a alpha sigma |
153 0.299 0.0710 0.270 | 153 0.299 0.0710 0.270 1.10 13.8 14.5 |
154 | 154 |
155 Effective search space used: 127710 | 155 Effective search space used: 127710 |
156 | 156 |
157 | 157 |
158 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens | 158 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
167 | 167 |
168 ***** No hits found ***** | 168 ***** No hits found ***** |
169 | 169 |
170 | 170 |
171 | 171 |
172 Lambda K H | 172 Lambda K H a alpha |
173 0.334 0.170 0.615 | 173 0.334 0.170 0.615 0.522 1.92 |
174 | 174 |
175 Gapped | 175 Gapped |
176 Lambda K H | 176 Lambda K H a alpha sigma |
177 0.299 0.0710 0.270 | 177 0.299 0.0710 0.270 1.10 13.8 14.5 |
178 | 178 |
179 Effective search space used: 370988 | 179 Effective search space used: 370988 |
180 | 180 |
181 | 181 |
182 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens | 182 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
192 | 192 |
193 ***** No hits found ***** | 193 ***** No hits found ***** |
194 | 194 |
195 | 195 |
196 | 196 |
197 Lambda K H | 197 Lambda K H a alpha |
198 0.334 0.170 0.615 | 198 0.334 0.170 0.615 0.522 1.92 |
199 | 199 |
200 Gapped | 200 Gapped |
201 Lambda K H | 201 Lambda K H a alpha sigma |
202 0.299 0.0710 0.270 | 202 0.299 0.0710 0.270 1.10 13.8 14.5 |
203 | 203 |
204 Effective search space used: 370988 | 204 Effective search space used: 370988 |
205 | 205 |
206 | 206 |
207 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens | 207 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
217 | 217 |
218 ***** No hits found ***** | 218 ***** No hits found ***** |
219 | 219 |
220 | 220 |
221 | 221 |
222 Lambda K H | 222 Lambda K H a alpha |
223 0.334 0.170 0.615 | 223 0.334 0.170 0.615 0.522 1.92 |
224 | 224 |
225 Gapped | 225 Gapped |
226 Lambda K H | 226 Lambda K H a alpha sigma |
227 0.299 0.0710 0.270 | 227 0.299 0.0710 0.270 1.10 13.8 14.5 |
228 | 228 |
229 Effective search space used: 370988 | 229 Effective search space used: 370988 |
230 | 230 |
231 | 231 |
232 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens | 232 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
242 | 242 |
243 ***** No hits found ***** | 243 ***** No hits found ***** |
244 | 244 |
245 | 245 |
246 | 246 |
247 Lambda K H | 247 Lambda K H a alpha |
248 0.334 0.170 0.615 | 248 0.334 0.170 0.615 0.522 1.92 |
249 | 249 |
250 Gapped | 250 Gapped |
251 Lambda K H | 251 Lambda K H a alpha sigma |
252 0.299 0.0710 0.270 | 252 0.299 0.0710 0.270 1.10 13.8 14.5 |
253 | 253 |
254 Effective search space used: 370988 | 254 Effective search space used: 370988 |
255 | 255 |
256 | 256 |
257 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens | 257 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
267 | 267 |
268 ***** No hits found ***** | 268 ***** No hits found ***** |
269 | 269 |
270 | 270 |
271 | 271 |
272 Lambda K H | 272 Lambda K H a alpha |
273 0.334 0.170 0.615 | 273 0.334 0.170 0.615 0.522 1.92 |
274 | 274 |
275 Gapped | 275 Gapped |
276 Lambda K H | 276 Lambda K H a alpha sigma |
277 0.299 0.0710 0.270 | 277 0.299 0.0710 0.270 1.10 13.8 14.5 |
278 | 278 |
279 Effective search space used: 370988 | 279 Effective search space used: 370988 |
280 | 280 |
281 | 281 |
282 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens | 282 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
292 | 292 |
293 ***** No hits found ***** | 293 ***** No hits found ***** |
294 | 294 |
295 | 295 |
296 | 296 |
297 Lambda K H | 297 Lambda K H a alpha |
298 0.334 0.170 0.615 | 298 0.334 0.170 0.615 0.522 1.92 |
299 | 299 |
300 Gapped | 300 Gapped |
301 Lambda K H | 301 Lambda K H a alpha sigma |
302 0.299 0.0710 0.270 | 302 0.299 0.0710 0.270 1.10 13.8 14.5 |
303 | 303 |
304 Effective search space used: 370988 | 304 Effective search space used: 370988 |
305 | 305 |
306 | 306 |
307 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 | 307 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
316 | 316 |
317 ***** No hits found ***** | 317 ***** No hits found ***** |
318 | 318 |
319 | 319 |
320 | 320 |
321 Lambda K H | 321 Lambda K H a alpha |
322 0.346 0.180 0.700 | 322 0.346 0.180 0.700 0.522 1.92 |
323 | 323 |
324 Gapped | 324 Gapped |
325 Lambda K H | 325 Lambda K H a alpha sigma |
326 0.299 0.0710 0.270 | 326 0.299 0.0710 0.270 1.10 13.8 14.5 |
327 | 327 |
328 Effective search space used: 441350 | 328 Effective search space used: 441350 |
329 | 329 |
330 | 330 |
331 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 | 331 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
341 | 341 |
342 ***** No hits found ***** | 342 ***** No hits found ***** |
343 | 343 |
344 | 344 |
345 | 345 |
346 Lambda K H | 346 Lambda K H a alpha |
347 0.346 0.180 0.700 | 347 0.346 0.180 0.700 0.522 1.92 |
348 | 348 |
349 Gapped | 349 Gapped |
350 Lambda K H | 350 Lambda K H a alpha sigma |
351 0.299 0.0710 0.270 | 351 0.299 0.0710 0.270 1.10 13.8 14.5 |
352 | 352 |
353 Effective search space used: 441350 | 353 Effective search space used: 441350 |
354 | 354 |
355 | 355 |
356 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 | 356 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
366 | 366 |
367 ***** No hits found ***** | 367 ***** No hits found ***** |
368 | 368 |
369 | 369 |
370 | 370 |
371 Lambda K H | 371 Lambda K H a alpha |
372 0.346 0.180 0.700 | 372 0.346 0.180 0.700 0.522 1.92 |
373 | 373 |
374 Gapped | 374 Gapped |
375 Lambda K H | 375 Lambda K H a alpha sigma |
376 0.299 0.0710 0.270 | 376 0.299 0.0710 0.270 1.10 13.8 14.5 |
377 | 377 |
378 Effective search space used: 441350 | 378 Effective search space used: 441350 |
379 | 379 |
380 | 380 |
381 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 | 381 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
391 | 391 |
392 ***** No hits found ***** | 392 ***** No hits found ***** |
393 | 393 |
394 | 394 |
395 | 395 |
396 Lambda K H | 396 Lambda K H a alpha |
397 0.346 0.180 0.700 | 397 0.346 0.180 0.700 0.522 1.92 |
398 | 398 |
399 Gapped | 399 Gapped |
400 Lambda K H | 400 Lambda K H a alpha sigma |
401 0.299 0.0710 0.270 | 401 0.299 0.0710 0.270 1.10 13.8 14.5 |
402 | 402 |
403 Effective search space used: 441350 | 403 Effective search space used: 441350 |
404 | 404 |
405 | 405 |
406 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 | 406 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
416 | 416 |
417 ***** No hits found ***** | 417 ***** No hits found ***** |
418 | 418 |
419 | 419 |
420 | 420 |
421 Lambda K H | 421 Lambda K H a alpha |
422 0.346 0.180 0.700 | 422 0.346 0.180 0.700 0.522 1.92 |
423 | 423 |
424 Gapped | 424 Gapped |
425 Lambda K H | 425 Lambda K H a alpha sigma |
426 0.299 0.0710 0.270 | 426 0.299 0.0710 0.270 1.10 13.8 14.5 |
427 | 427 |
428 Effective search space used: 441350 | 428 Effective search space used: 441350 |
429 | 429 |
430 | 430 |
431 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 | 431 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
441 | 441 |
442 ***** No hits found ***** | 442 ***** No hits found ***** |
443 | 443 |
444 | 444 |
445 | 445 |
446 Lambda K H | 446 Lambda K H a alpha |
447 0.346 0.180 0.700 | 447 0.346 0.180 0.700 0.522 1.92 |
448 | 448 |
449 Gapped | 449 Gapped |
450 Lambda K H | 450 Lambda K H a alpha sigma |
451 0.299 0.0710 0.270 | 451 0.299 0.0710 0.270 1.10 13.8 14.5 |
452 | 452 |
453 Effective search space used: 441350 | 453 Effective search space used: 441350 |
454 | 454 |
455 | 455 |
456 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 | 456 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
490 YNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA | 490 YNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA |
491 Sbjct 901 YNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA 1044 | 491 Sbjct 901 YNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA 1044 |
492 | 492 |
493 | 493 |
494 | 494 |
495 Lambda K H | 495 Lambda K H a alpha |
496 0.351 0.182 0.707 | 496 0.351 0.182 0.707 0.522 1.92 |
497 | 497 |
498 Gapped | 498 Gapped |
499 Lambda K H | 499 Lambda K H a alpha sigma |
500 0.299 0.0710 0.270 | 500 0.299 0.0710 0.270 1.10 13.8 14.5 |
501 | 501 |
502 Effective search space used: 109230 | 502 Effective search space used: 109230 |
503 | 503 |
504 | 504 |
505 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 | 505 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
540 YNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE | 540 YNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE |
541 Sbjct 942 YNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE 1067 | 541 Sbjct 942 YNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE 1067 |
542 | 542 |
543 | 543 |
544 | 544 |
545 Lambda K H | 545 Lambda K H a alpha |
546 0.351 0.182 0.707 | 546 0.351 0.182 0.707 0.522 1.92 |
547 | 547 |
548 Gapped | 548 Gapped |
549 Lambda K H | 549 Lambda K H a alpha sigma |
550 0.299 0.0710 0.270 | 550 0.299 0.0710 0.270 1.10 13.8 14.5 |
551 | 551 |
552 Effective search space used: 109230 | 552 Effective search space used: 109230 |
553 | 553 |
554 | 554 |
555 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 | 555 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
614 QFRNCMLTT+CCGKNPLGDDEAS T | 614 QFRNCMLTT+CCGKNPLGDDEAS T |
615 Sbjct 4222 QFRNCMLTTLCCGKNPLGDDEASTTA 4299 | 615 Sbjct 4222 QFRNCMLTTLCCGKNPLGDDEASTTA 4299 |
616 | 616 |
617 | 617 |
618 | 618 |
619 Lambda K H | 619 Lambda K H a alpha |
620 0.351 0.182 0.707 | 620 0.351 0.182 0.707 0.522 1.92 |
621 | 621 |
622 Gapped | 622 Gapped |
623 Lambda K H | 623 Lambda K H a alpha sigma |
624 0.299 0.0710 0.270 | 624 0.299 0.0710 0.270 1.10 13.8 14.5 |
625 | 625 |
626 Effective search space used: 109230 | 626 Effective search space used: 109230 |
627 | 627 |
628 | 628 |
629 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 | 629 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
664 KQFRNCMLTT+CCGKNPLGDDEAS T | 664 KQFRNCMLTT+CCGKNPLGDDEAS T |
665 Sbjct 901 KQFRNCMLTTLCCGKNPLGDDEASTT 978 | 665 Sbjct 901 KQFRNCMLTTLCCGKNPLGDDEASTT 978 |
666 | 666 |
667 | 667 |
668 | 668 |
669 Lambda K H | 669 Lambda K H a alpha |
670 0.351 0.182 0.707 | 670 0.351 0.182 0.707 0.522 1.92 |
671 | 671 |
672 Gapped | 672 Gapped |
673 Lambda K H | 673 Lambda K H a alpha sigma |
674 0.299 0.0710 0.270 | 674 0.299 0.0710 0.270 1.10 13.8 14.5 |
675 | 675 |
676 Effective search space used: 109230 | 676 Effective search space used: 109230 |
677 | 677 |
678 | 678 |
679 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 | 679 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
714 YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA | 714 YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA |
715 Sbjct 901 YNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA 1044 | 715 Sbjct 901 YNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA 1044 |
716 | 716 |
717 | 717 |
718 | 718 |
719 Lambda K H | 719 Lambda K H a alpha |
720 0.351 0.182 0.707 | 720 0.351 0.182 0.707 0.522 1.92 |
721 | 721 |
722 Gapped | 722 Gapped |
723 Lambda K H | 723 Lambda K H a alpha sigma |
724 0.299 0.0710 0.270 | 724 0.299 0.0710 0.270 1.10 13.8 14.5 |
725 | 725 |
726 Effective search space used: 109230 | 726 Effective search space used: 109230 |
727 | 727 |
728 | 728 |
729 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 | 729 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
764 YNP+IYI MNKQFR CM+TT+CCGKNP +D ASAT SKTE | 764 YNP+IYI MNKQFR CM+TT+CCGKNP +D ASAT SKTE |
765 Sbjct 923 YNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE 1048 | 765 Sbjct 923 YNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE 1048 |
766 | 766 |
767 | 767 |
768 | 768 |
769 Lambda K H | 769 Lambda K H a alpha |
770 0.351 0.182 0.707 | 770 0.351 0.182 0.707 0.522 1.92 |
771 | 771 |
772 Gapped | 772 Gapped |
773 Lambda K H | 773 Lambda K H a alpha sigma |
774 0.299 0.0710 0.270 | 774 0.299 0.0710 0.270 1.10 13.8 14.5 |
775 | 775 |
776 Effective search space used: 109230 | 776 Effective search space used: 109230 |
777 | 777 |
778 | 778 |
779 | 779 |