Mercurial > repos > devteam > ncbi_blast_plus

comparison test-data/blastx_rhodopsin_vs_four_human.xml @ 2:ab1a8640f817 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded v0.0.12 again, without extra path
author peterjc
date Thu, 23 Aug 2012 07:32:06 -0400
parents d375502056f1
children 1f546099212f
comparison
equal deleted inserted replaced
1:27d7e1deada4 2:ab1a8640f817
1 <?xml version="1.0"?>
2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "NCBI_BlastOutput.dtd">
3 <BlastOutput>
4 <BlastOutput_program>blastx</BlastOutput_program>
5 <BlastOutput_version>BLASTX 2.2.25+</BlastOutput_version>
6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
7 <BlastOutput_db></BlastOutput_db>
8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
9 <BlastOutput_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</BlastOutput_query-def>
10 <BlastOutput_query-len>1047</BlastOutput_query-len>
11 <BlastOutput_param>
12 <Parameters>
13 <Parameters_matrix>BLOSUM62</Parameters_matrix>
14 <Parameters_expect>1e-10</Parameters_expect>
15 <Parameters_gap-open>11</Parameters_gap-open>
16 <Parameters_gap-extend>1</Parameters_gap-extend>
17 <Parameters_filter>L;</Parameters_filter>
18 </Parameters>
19 </BlastOutput_param>
20 <BlastOutput_iterations>
21 <Iteration>
22 <Iteration_iter-num>1</Iteration_iter-num>
23 <Iteration_query-ID>Query_1</Iteration_query-ID>
24 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def>
25 <Iteration_query-len>1047</Iteration_query-len>
26 <Iteration_hits></Iteration_hits>
27 <Iteration_stat>
28 <Statistics>
29 <Statistics_db-num>0</Statistics_db-num>
30 <Statistics_db-len>0</Statistics_db-len>
31 <Statistics_hsp-len>29</Statistics_hsp-len>
32 <Statistics_eff-space>102080</Statistics_eff-space>
33 <Statistics_kappa>0.041</Statistics_kappa>
34 <Statistics_lambda>0.267</Statistics_lambda>
35 <Statistics_entropy>0.14</Statistics_entropy>
36 </Statistics>
37 </Iteration_stat>
38 <Iteration_message>No hits found</Iteration_message>
39 </Iteration>
40 <Iteration>
41 <Iteration_iter-num>2</Iteration_iter-num>
42 <Iteration_query-ID>Query_1</Iteration_query-ID>
43 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def>
44 <Iteration_query-len>1047</Iteration_query-len>
45 <Iteration_hits></Iteration_hits>
46 <Iteration_stat>
47 <Statistics>
48 <Statistics_db-num>0</Statistics_db-num>
49 <Statistics_db-len>0</Statistics_db-len>
50 <Statistics_hsp-len>29</Statistics_hsp-len>
51 <Statistics_eff-space>102080</Statistics_eff-space>
52 <Statistics_kappa>0.041</Statistics_kappa>
53 <Statistics_lambda>0.267</Statistics_lambda>
54 <Statistics_entropy>0.14</Statistics_entropy>
55 </Statistics>
56 </Iteration_stat>
57 <Iteration_message>No hits found</Iteration_message>
58 </Iteration>
59 <Iteration>
60 <Iteration_iter-num>3</Iteration_iter-num>
61 <Iteration_query-ID>Query_1</Iteration_query-ID>
62 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def>
63 <Iteration_query-len>1047</Iteration_query-len>
64 <Iteration_hits></Iteration_hits>
65 <Iteration_stat>
66 <Statistics>
67 <Statistics_db-num>0</Statistics_db-num>
68 <Statistics_db-len>0</Statistics_db-len>
69 <Statistics_hsp-len>29</Statistics_hsp-len>
70 <Statistics_eff-space>102080</Statistics_eff-space>
71 <Statistics_kappa>0.041</Statistics_kappa>
72 <Statistics_lambda>0.267</Statistics_lambda>
73 <Statistics_entropy>0.14</Statistics_entropy>
74 </Statistics>
75 </Iteration_stat>
76 <Iteration_message>No hits found</Iteration_message>
77 </Iteration>
78 <Iteration>
79 <Iteration_iter-num>4</Iteration_iter-num>
80 <Iteration_query-ID>Query_1</Iteration_query-ID>
81 <Iteration_query-def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Iteration_query-def>
82 <Iteration_query-len>1047</Iteration_query-len>
83 <Iteration_hits>
84 <Hit>
85 <Hit_num>1</Hit_num>
86 <Hit_id>Subject_4</Hit_id>
87 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
88 <Hit_accession>Subject_4</Hit_accession>
89 <Hit_len>348</Hit_len>
90 <Hit_hsps>
91 <Hsp>
92 <Hsp_num>1</Hsp_num>
93 <Hsp_bit-score>662.143908370966</Hsp_bit-score>
94 <Hsp_score>1707</Hsp_score>
95 <Hsp_evalue>0</Hsp_evalue>
96 <Hsp_query-from>1</Hsp_query-from>
97 <Hsp_query-to>1044</Hsp_query-to>
98 <Hsp_hit-from>1</Hsp_hit-from>
99 <Hsp_hit-to>348</Hsp_hit-to>
100 <Hsp_query-frame>1</Hsp_query-frame>
101 <Hsp_hit-frame>0</Hsp_hit-frame>
102 <Hsp_identity>336</Hsp_identity>
103 <Hsp_positive>343</Hsp_positive>
104 <Hsp_gaps>0</Hsp_gaps>
105 <Hsp_align-len>348</Hsp_align-len>
106 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_qseq>
107 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_hseq>
108 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline>
109 </Hsp>
110 </Hit_hsps>
111 </Hit>
112 </Iteration_hits>
113 <Iteration_stat>
114 <Statistics>
115 <Statistics_db-num>0</Statistics_db-num>
116 <Statistics_db-len>0</Statistics_db-len>
117 <Statistics_hsp-len>29</Statistics_hsp-len>
118 <Statistics_eff-space>102080</Statistics_eff-space>
119 <Statistics_kappa>0.041</Statistics_kappa>
120 <Statistics_lambda>0.267</Statistics_lambda>
121 <Statistics_entropy>0.14</Statistics_entropy>
122 </Statistics>
123 </Iteration_stat>
124 </Iteration>
125 <Iteration>
126 <Iteration_iter-num>5</Iteration_iter-num>
127 <Iteration_query-ID>Query_2</Iteration_query-ID>
128 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def>
129 <Iteration_query-len>1574</Iteration_query-len>
130 <Iteration_hits></Iteration_hits>
131 <Iteration_stat>
132 <Statistics>
133 <Statistics_db-num>0</Statistics_db-num>
134 <Statistics_db-len>0</Statistics_db-len>
135 <Statistics_hsp-len>32</Statistics_hsp-len>
136 <Statistics_eff-space>155472</Statistics_eff-space>
137 <Statistics_kappa>0.041</Statistics_kappa>
138 <Statistics_lambda>0.267</Statistics_lambda>
139 <Statistics_entropy>0.14</Statistics_entropy>
140 </Statistics>
141 </Iteration_stat>
142 <Iteration_message>No hits found</Iteration_message>
143 </Iteration>
144 <Iteration>
145 <Iteration_iter-num>6</Iteration_iter-num>
146 <Iteration_query-ID>Query_2</Iteration_query-ID>
147 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def>
148 <Iteration_query-len>1574</Iteration_query-len>
149 <Iteration_hits></Iteration_hits>
150 <Iteration_stat>
151 <Statistics>
152 <Statistics_db-num>0</Statistics_db-num>
153 <Statistics_db-len>0</Statistics_db-len>
154 <Statistics_hsp-len>32</Statistics_hsp-len>
155 <Statistics_eff-space>155472</Statistics_eff-space>
156 <Statistics_kappa>0.041</Statistics_kappa>
157 <Statistics_lambda>0.267</Statistics_lambda>
158 <Statistics_entropy>0.14</Statistics_entropy>
159 </Statistics>
160 </Iteration_stat>
161 <Iteration_message>No hits found</Iteration_message>
162 </Iteration>
163 <Iteration>
164 <Iteration_iter-num>7</Iteration_iter-num>
165 <Iteration_query-ID>Query_2</Iteration_query-ID>
166 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def>
167 <Iteration_query-len>1574</Iteration_query-len>
168 <Iteration_hits></Iteration_hits>
169 <Iteration_stat>
170 <Statistics>
171 <Statistics_db-num>0</Statistics_db-num>
172 <Statistics_db-len>0</Statistics_db-len>
173 <Statistics_hsp-len>32</Statistics_hsp-len>
174 <Statistics_eff-space>155472</Statistics_eff-space>
175 <Statistics_kappa>0.041</Statistics_kappa>
176 <Statistics_lambda>0.267</Statistics_lambda>
177 <Statistics_entropy>0.14</Statistics_entropy>
178 </Statistics>
179 </Iteration_stat>
180 <Iteration_message>No hits found</Iteration_message>
181 </Iteration>
182 <Iteration>
183 <Iteration_iter-num>8</Iteration_iter-num>
184 <Iteration_query-ID>Query_2</Iteration_query-ID>
185 <Iteration_query-def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Iteration_query-def>
186 <Iteration_query-len>1574</Iteration_query-len>
187 <Iteration_hits>
188 <Hit>
189 <Hit_num>1</Hit_num>
190 <Hit_id>Subject_4</Hit_id>
191 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
192 <Hit_accession>Subject_4</Hit_accession>
193 <Hit_len>348</Hit_len>
194 <Hit_hsps>
195 <Hsp>
196 <Hsp_num>1</Hsp_num>
197 <Hsp_bit-score>575.088804213644</Hsp_bit-score>
198 <Hsp_score>1481</Hsp_score>
199 <Hsp_evalue>1.31349806431671e-168</Hsp_evalue>
200 <Hsp_query-from>42</Hsp_query-from>
201 <Hsp_query-to>1037</Hsp_query-to>
202 <Hsp_hit-from>1</Hsp_hit-from>
203 <Hsp_hit-to>332</Hsp_hit-to>
204 <Hsp_query-frame>3</Hsp_query-frame>
205 <Hsp_hit-frame>0</Hsp_hit-frame>
206 <Hsp_identity>283</Hsp_identity>
207 <Hsp_positive>315</Hsp_positive>
208 <Hsp_gaps>0</Hsp_gaps>
209 <Hsp_align-len>332</Hsp_align-len>
210 <Hsp_qseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDD</Hsp_qseq>
211 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDE</Hsp_hseq>
212 <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S++GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF++QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+</Hsp_midline>
213 </Hsp>
214 </Hit_hsps>
215 </Hit>
216 </Iteration_hits>
217 <Iteration_stat>
218 <Statistics>
219 <Statistics_db-num>0</Statistics_db-num>
220 <Statistics_db-len>0</Statistics_db-len>
221 <Statistics_hsp-len>32</Statistics_hsp-len>
222 <Statistics_eff-space>155472</Statistics_eff-space>
223 <Statistics_kappa>0.041</Statistics_kappa>
224 <Statistics_lambda>0.267</Statistics_lambda>
225 <Statistics_entropy>0.14</Statistics_entropy>
226 </Statistics>
227 </Iteration_stat>
228 </Iteration>
229 <Iteration>
230 <Iteration_iter-num>9</Iteration_iter-num>
231 <Iteration_query-ID>Query_3</Iteration_query-ID>
232 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def>
233 <Iteration_query-len>4301</Iteration_query-len>
234 <Iteration_hits></Iteration_hits>
235 <Iteration_stat>
236 <Statistics>
237 <Statistics_db-num>0</Statistics_db-num>
238 <Statistics_db-len>0</Statistics_db-len>
239 <Statistics_hsp-len>39</Statistics_hsp-len>
240 <Statistics_eff-space>430746</Statistics_eff-space>
241 <Statistics_kappa>0.041</Statistics_kappa>
242 <Statistics_lambda>0.267</Statistics_lambda>
243 <Statistics_entropy>0.14</Statistics_entropy>
244 </Statistics>
245 </Iteration_stat>
246 <Iteration_message>No hits found</Iteration_message>
247 </Iteration>
248 <Iteration>
249 <Iteration_iter-num>10</Iteration_iter-num>
250 <Iteration_query-ID>Query_3</Iteration_query-ID>
251 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def>
252 <Iteration_query-len>4301</Iteration_query-len>
253 <Iteration_hits></Iteration_hits>
254 <Iteration_stat>
255 <Statistics>
256 <Statistics_db-num>0</Statistics_db-num>
257 <Statistics_db-len>0</Statistics_db-len>
258 <Statistics_hsp-len>39</Statistics_hsp-len>
259 <Statistics_eff-space>430746</Statistics_eff-space>
260 <Statistics_kappa>0.041</Statistics_kappa>
261 <Statistics_lambda>0.267</Statistics_lambda>
262 <Statistics_entropy>0.14</Statistics_entropy>
263 </Statistics>
264 </Iteration_stat>
265 <Iteration_message>No hits found</Iteration_message>
266 </Iteration>
267 <Iteration>
268 <Iteration_iter-num>11</Iteration_iter-num>
269 <Iteration_query-ID>Query_3</Iteration_query-ID>
270 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def>
271 <Iteration_query-len>4301</Iteration_query-len>
272 <Iteration_hits></Iteration_hits>
273 <Iteration_stat>
274 <Statistics>
275 <Statistics_db-num>0</Statistics_db-num>
276 <Statistics_db-len>0</Statistics_db-len>
277 <Statistics_hsp-len>39</Statistics_hsp-len>
278 <Statistics_eff-space>430746</Statistics_eff-space>
279 <Statistics_kappa>0.041</Statistics_kappa>
280 <Statistics_lambda>0.267</Statistics_lambda>
281 <Statistics_entropy>0.14</Statistics_entropy>
282 </Statistics>
283 </Iteration_stat>
284 <Iteration_message>No hits found</Iteration_message>
285 </Iteration>
286 <Iteration>
287 <Iteration_iter-num>12</Iteration_iter-num>
288 <Iteration_query-ID>Query_3</Iteration_query-ID>
289 <Iteration_query-def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Iteration_query-def>
290 <Iteration_query-len>4301</Iteration_query-len>
291 <Iteration_hits>
292 <Hit>
293 <Hit_num>1</Hit_num>
294 <Hit_id>Subject_4</Hit_id>
295 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
296 <Hit_accession>Subject_4</Hit_accession>
297 <Hit_len>348</Hit_len>
298 <Hit_hsps>
299 <Hsp>
300 <Hsp_num>1</Hsp_num>
301 <Hsp_bit-score>224.171990552935</Hsp_bit-score>
302 <Hsp_score>570</Hsp_score>
303 <Hsp_evalue>1.57574304751949e-62</Hsp_evalue>
304 <Hsp_query-from>1</Hsp_query-from>
305 <Hsp_query-to>333</Hsp_query-to>
306 <Hsp_hit-from>11</Hsp_hit-from>
307 <Hsp_hit-to>121</Hsp_hit-to>
308 <Hsp_query-frame>1</Hsp_query-frame>
309 <Hsp_hit-frame>0</Hsp_hit-frame>
310 <Hsp_identity>107</Hsp_identity>
311 <Hsp_positive>109</Hsp_positive>
312 <Hsp_gaps>0</Hsp_gaps>
313 <Hsp_align-len>111</Hsp_align-len>
314 <Hsp_qseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_qseq>
315 <Hsp_hseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_hseq>
316 <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_midline>
317 </Hsp>
318 <Hsp>
319 <Hsp_num>2</Hsp_num>
320 <Hsp_bit-score>129.412894877266</Hsp_bit-score>
321 <Hsp_score>324</Hsp_score>
322 <Hsp_evalue>5.28220874623366e-34</Hsp_evalue>
323 <Hsp_query-from>3174</Hsp_query-from>
324 <Hsp_query-to>3368</Hsp_query-to>
325 <Hsp_hit-from>248</Hsp_hit-from>
326 <Hsp_hit-to>312</Hsp_hit-to>
327 <Hsp_query-frame>3</Hsp_query-frame>
328 <Hsp_hit-frame>0</Hsp_hit-frame>
329 <Hsp_identity>60</Hsp_identity>
330 <Hsp_positive>64</Hsp_positive>
331 <Hsp_gaps>0</Hsp_gaps>
332 <Hsp_align-len>65</Hsp_align-len>
333 <Hsp_qseq>KEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ</Hsp_qseq>
334 <Hsp_hseq>KEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ</Hsp_hseq>
335 <Hsp_midline>KEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ</Hsp_midline>
336 </Hsp>
337 <Hsp>
338 <Hsp_num>3</Hsp_num>
339 <Hsp_bit-score>120.938504207085</Hsp_bit-score>
340 <Hsp_score>302</Hsp_score>
341 <Hsp_evalue>1.87871691987854e-31</Hsp_evalue>
342 <Hsp_query-from>2855</Hsp_query-from>
343 <Hsp_query-to>3022</Hsp_query-to>
344 <Hsp_hit-from>177</Hsp_hit-from>
345 <Hsp_hit-to>232</Hsp_hit-to>
346 <Hsp_query-frame>2</Hsp_query-frame>
347 <Hsp_hit-frame>0</Hsp_hit-frame>
348 <Hsp_identity>54</Hsp_identity>
349 <Hsp_positive>56</Hsp_positive>
350 <Hsp_gaps>0</Hsp_gaps>
351 <Hsp_align-len>56</Hsp_align-len>
352 <Hsp_qseq>RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKE</Hsp_qseq>
353 <Hsp_hseq>RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKE</Hsp_hseq>
354 <Hsp_midline>RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE</Hsp_midline>
355 </Hsp>
356 <Hsp>
357 <Hsp_num>4</Hsp_num>
358 <Hsp_bit-score>118.242107175663</Hsp_bit-score>
359 <Hsp_score>295</Hsp_score>
360 <Hsp_evalue>1.21774886471054e-30</Hsp_evalue>
361 <Hsp_query-from>1404</Hsp_query-from>
362 <Hsp_query-to>1580</Hsp_query-to>
363 <Hsp_hit-from>119</Hsp_hit-from>
364 <Hsp_hit-to>177</Hsp_hit-to>
365 <Hsp_query-frame>3</Hsp_query-frame>
366 <Hsp_hit-frame>0</Hsp_hit-frame>
367 <Hsp_identity>55</Hsp_identity>
368 <Hsp_positive>56</Hsp_positive>
369 <Hsp_gaps>0</Hsp_gaps>
370 <Hsp_align-len>59</Hsp_align-len>
371 <Hsp_qseq>LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR</Hsp_qseq>
372 <Hsp_hseq>LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR</Hsp_hseq>
373 <Hsp_midline>L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR</Hsp_midline>
374 </Hsp>
375 <Hsp>
376 <Hsp_num>5</Hsp_num>
377 <Hsp_bit-score>56.2249754529693</Hsp_bit-score>
378 <Hsp_score>134</Hsp_score>
379 <Hsp_evalue>5.68296036241677e-12</Hsp_evalue>
380 <Hsp_query-from>4222</Hsp_query-from>
381 <Hsp_query-to>4296</Hsp_query-to>
382 <Hsp_hit-from>312</Hsp_hit-from>
383 <Hsp_hit-to>336</Hsp_hit-to>
384 <Hsp_query-frame>1</Hsp_query-frame>
385 <Hsp_hit-frame>0</Hsp_hit-frame>
386 <Hsp_identity>23</Hsp_identity>
387 <Hsp_positive>24</Hsp_positive>
388 <Hsp_gaps>0</Hsp_gaps>
389 <Hsp_align-len>25</Hsp_align-len>
390 <Hsp_qseq>QFRNCMLTTLCCGKNPLGDDEASTT</Hsp_qseq>
391 <Hsp_hseq>QFRNCMLTTICCGKNPLGDDEASAT</Hsp_hseq>
392 <Hsp_midline>QFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline>
393 </Hsp>
394 </Hit_hsps>
395 </Hit>
396 </Iteration_hits>
397 <Iteration_stat>
398 <Statistics>
399 <Statistics_db-num>0</Statistics_db-num>
400 <Statistics_db-len>0</Statistics_db-len>
401 <Statistics_hsp-len>39</Statistics_hsp-len>
402 <Statistics_eff-space>430746</Statistics_eff-space>
403 <Statistics_kappa>0.041</Statistics_kappa>
404 <Statistics_lambda>0.267</Statistics_lambda>
405 <Statistics_entropy>0.14</Statistics_entropy>
406 </Statistics>
407 </Iteration_stat>
408 </Iteration>
409 <Iteration>
410 <Iteration_iter-num>13</Iteration_iter-num>
411 <Iteration_query-ID>Query_4</Iteration_query-ID>
412 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def>
413 <Iteration_query-len>983</Iteration_query-len>
414 <Iteration_hits></Iteration_hits>
415 <Iteration_stat>
416 <Statistics>
417 <Statistics_db-num>0</Statistics_db-num>
418 <Statistics_db-len>0</Statistics_db-len>
419 <Statistics_hsp-len>28</Statistics_hsp-len>
420 <Statistics_eff-space>95680</Statistics_eff-space>
421 <Statistics_kappa>0.041</Statistics_kappa>
422 <Statistics_lambda>0.267</Statistics_lambda>
423 <Statistics_entropy>0.14</Statistics_entropy>
424 </Statistics>
425 </Iteration_stat>
426 <Iteration_message>No hits found</Iteration_message>
427 </Iteration>
428 <Iteration>
429 <Iteration_iter-num>14</Iteration_iter-num>
430 <Iteration_query-ID>Query_4</Iteration_query-ID>
431 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def>
432 <Iteration_query-len>983</Iteration_query-len>
433 <Iteration_hits></Iteration_hits>
434 <Iteration_stat>
435 <Statistics>
436 <Statistics_db-num>0</Statistics_db-num>
437 <Statistics_db-len>0</Statistics_db-len>
438 <Statistics_hsp-len>28</Statistics_hsp-len>
439 <Statistics_eff-space>95680</Statistics_eff-space>
440 <Statistics_kappa>0.041</Statistics_kappa>
441 <Statistics_lambda>0.267</Statistics_lambda>
442 <Statistics_entropy>0.14</Statistics_entropy>
443 </Statistics>
444 </Iteration_stat>
445 <Iteration_message>No hits found</Iteration_message>
446 </Iteration>
447 <Iteration>
448 <Iteration_iter-num>15</Iteration_iter-num>
449 <Iteration_query-ID>Query_4</Iteration_query-ID>
450 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def>
451 <Iteration_query-len>983</Iteration_query-len>
452 <Iteration_hits></Iteration_hits>
453 <Iteration_stat>
454 <Statistics>
455 <Statistics_db-num>0</Statistics_db-num>
456 <Statistics_db-len>0</Statistics_db-len>
457 <Statistics_hsp-len>28</Statistics_hsp-len>
458 <Statistics_eff-space>95680</Statistics_eff-space>
459 <Statistics_kappa>0.041</Statistics_kappa>
460 <Statistics_lambda>0.267</Statistics_lambda>
461 <Statistics_entropy>0.14</Statistics_entropy>
462 </Statistics>
463 </Iteration_stat>
464 <Iteration_message>No hits found</Iteration_message>
465 </Iteration>
466 <Iteration>
467 <Iteration_iter-num>16</Iteration_iter-num>
468 <Iteration_query-ID>Query_4</Iteration_query-ID>
469 <Iteration_query-def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Iteration_query-def>
470 <Iteration_query-len>983</Iteration_query-len>
471 <Iteration_hits>
472 <Hit>
473 <Hit_num>1</Hit_num>
474 <Hit_id>Subject_4</Hit_id>
475 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
476 <Hit_accession>Subject_4</Hit_accession>
477 <Hit_len>348</Hit_len>
478 <Hit_hsps>
479 <Hsp>
480 <Hsp_num>1</Hsp_num>
481 <Hsp_bit-score>613.993961381297</Hsp_bit-score>
482 <Hsp_score>1582</Hsp_score>
483 <Hsp_evalue>1.57028732393616e-180</Hsp_evalue>
484 <Hsp_query-from>1</Hsp_query-from>
485 <Hsp_query-to>978</Hsp_query-to>
486 <Hsp_hit-from>11</Hsp_hit-from>
487 <Hsp_hit-to>336</Hsp_hit-to>
488 <Hsp_query-frame>1</Hsp_query-frame>
489 <Hsp_hit-frame>0</Hsp_hit-frame>
490 <Hsp_identity>310</Hsp_identity>
491 <Hsp_positive>322</Hsp_positive>
492 <Hsp_gaps>0</Hsp_gaps>
493 <Hsp_align-len>326</Hsp_align-len>
494 <Hsp_qseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT</Hsp_qseq>
495 <Hsp_hseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT</Hsp_hseq>
496 <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline>
497 </Hsp>
498 </Hit_hsps>
499 </Hit>
500 </Iteration_hits>
501 <Iteration_stat>
502 <Statistics>
503 <Statistics_db-num>0</Statistics_db-num>
504 <Statistics_db-len>0</Statistics_db-len>
505 <Statistics_hsp-len>28</Statistics_hsp-len>
506 <Statistics_eff-space>95680</Statistics_eff-space>
507 <Statistics_kappa>0.041</Statistics_kappa>
508 <Statistics_lambda>0.267</Statistics_lambda>
509 <Statistics_entropy>0.14</Statistics_entropy>
510 </Statistics>
511 </Iteration_stat>
512 </Iteration>
513 <Iteration>
514 <Iteration_iter-num>17</Iteration_iter-num>
515 <Iteration_query-ID>Query_5</Iteration_query-ID>
516 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def>
517 <Iteration_query-len>1047</Iteration_query-len>
518 <Iteration_hits></Iteration_hits>
519 <Iteration_stat>
520 <Statistics>
521 <Statistics_db-num>0</Statistics_db-num>
522 <Statistics_db-len>0</Statistics_db-len>
523 <Statistics_hsp-len>29</Statistics_hsp-len>
524 <Statistics_eff-space>102080</Statistics_eff-space>
525 <Statistics_kappa>0.041</Statistics_kappa>
526 <Statistics_lambda>0.267</Statistics_lambda>
527 <Statistics_entropy>0.14</Statistics_entropy>
528 </Statistics>
529 </Iteration_stat>
530 <Iteration_message>No hits found</Iteration_message>
531 </Iteration>
532 <Iteration>
533 <Iteration_iter-num>18</Iteration_iter-num>
534 <Iteration_query-ID>Query_5</Iteration_query-ID>
535 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def>
536 <Iteration_query-len>1047</Iteration_query-len>
537 <Iteration_hits></Iteration_hits>
538 <Iteration_stat>
539 <Statistics>
540 <Statistics_db-num>0</Statistics_db-num>
541 <Statistics_db-len>0</Statistics_db-len>
542 <Statistics_hsp-len>29</Statistics_hsp-len>
543 <Statistics_eff-space>102080</Statistics_eff-space>
544 <Statistics_kappa>0.041</Statistics_kappa>
545 <Statistics_lambda>0.267</Statistics_lambda>
546 <Statistics_entropy>0.14</Statistics_entropy>
547 </Statistics>
548 </Iteration_stat>
549 <Iteration_message>No hits found</Iteration_message>
550 </Iteration>
551 <Iteration>
552 <Iteration_iter-num>19</Iteration_iter-num>
553 <Iteration_query-ID>Query_5</Iteration_query-ID>
554 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def>
555 <Iteration_query-len>1047</Iteration_query-len>
556 <Iteration_hits></Iteration_hits>
557 <Iteration_stat>
558 <Statistics>
559 <Statistics_db-num>0</Statistics_db-num>
560 <Statistics_db-len>0</Statistics_db-len>
561 <Statistics_hsp-len>29</Statistics_hsp-len>
562 <Statistics_eff-space>102080</Statistics_eff-space>
563 <Statistics_kappa>0.041</Statistics_kappa>
564 <Statistics_lambda>0.267</Statistics_lambda>
565 <Statistics_entropy>0.14</Statistics_entropy>
566 </Statistics>
567 </Iteration_stat>
568 <Iteration_message>No hits found</Iteration_message>
569 </Iteration>
570 <Iteration>
571 <Iteration_iter-num>20</Iteration_iter-num>
572 <Iteration_query-ID>Query_5</Iteration_query-ID>
573 <Iteration_query-def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Iteration_query-def>
574 <Iteration_query-len>1047</Iteration_query-len>
575 <Iteration_hits>
576 <Hit>
577 <Hit_num>1</Hit_num>
578 <Hit_id>Subject_4</Hit_id>
579 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
580 <Hit_accession>Subject_4</Hit_accession>
581 <Hit_len>348</Hit_len>
582 <Hit_hsps>
583 <Hsp>
584 <Hsp_num>1</Hsp_num>
585 <Hsp_bit-score>641.728330847346</Hsp_bit-score>
586 <Hsp_score>1654</Hsp_score>
587 <Hsp_evalue>0</Hsp_evalue>
588 <Hsp_query-from>1</Hsp_query-from>
589 <Hsp_query-to>1044</Hsp_query-to>
590 <Hsp_hit-from>1</Hsp_hit-from>
591 <Hsp_hit-to>348</Hsp_hit-to>
592 <Hsp_query-frame>1</Hsp_query-frame>
593 <Hsp_hit-frame>0</Hsp_hit-frame>
594 <Hsp_identity>325</Hsp_identity>
595 <Hsp_positive>337</Hsp_positive>
596 <Hsp_gaps>0</Hsp_gaps>
597 <Hsp_align-len>348</Hsp_align-len>
598 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_qseq>
599 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_hseq>
600 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline>
601 </Hsp>
602 </Hit_hsps>
603 </Hit>
604 </Iteration_hits>
605 <Iteration_stat>
606 <Statistics>
607 <Statistics_db-num>0</Statistics_db-num>
608 <Statistics_db-len>0</Statistics_db-len>
609 <Statistics_hsp-len>29</Statistics_hsp-len>
610 <Statistics_eff-space>102080</Statistics_eff-space>
611 <Statistics_kappa>0.041</Statistics_kappa>
612 <Statistics_lambda>0.267</Statistics_lambda>
613 <Statistics_entropy>0.14</Statistics_entropy>
614 </Statistics>
615 </Iteration_stat>
616 </Iteration>
617 <Iteration>
618 <Iteration_iter-num>21</Iteration_iter-num>
619 <Iteration_query-ID>Query_6</Iteration_query-ID>
620 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def>
621 <Iteration_query-len>1344</Iteration_query-len>
622 <Iteration_hits></Iteration_hits>
623 <Iteration_stat>
624 <Statistics>
625 <Statistics_db-num>0</Statistics_db-num>
626 <Statistics_db-len>0</Statistics_db-len>
627 <Statistics_hsp-len>31</Statistics_hsp-len>
628 <Statistics_eff-space>132189</Statistics_eff-space>
629 <Statistics_kappa>0.041</Statistics_kappa>
630 <Statistics_lambda>0.267</Statistics_lambda>
631 <Statistics_entropy>0.14</Statistics_entropy>
632 </Statistics>
633 </Iteration_stat>
634 <Iteration_message>No hits found</Iteration_message>
635 </Iteration>
636 <Iteration>
637 <Iteration_iter-num>22</Iteration_iter-num>
638 <Iteration_query-ID>Query_6</Iteration_query-ID>
639 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def>
640 <Iteration_query-len>1344</Iteration_query-len>
641 <Iteration_hits></Iteration_hits>
642 <Iteration_stat>
643 <Statistics>
644 <Statistics_db-num>0</Statistics_db-num>
645 <Statistics_db-len>0</Statistics_db-len>
646 <Statistics_hsp-len>31</Statistics_hsp-len>
647 <Statistics_eff-space>132189</Statistics_eff-space>
648 <Statistics_kappa>0.041</Statistics_kappa>
649 <Statistics_lambda>0.267</Statistics_lambda>
650 <Statistics_entropy>0.14</Statistics_entropy>
651 </Statistics>
652 </Iteration_stat>
653 <Iteration_message>No hits found</Iteration_message>
654 </Iteration>
655 <Iteration>
656 <Iteration_iter-num>23</Iteration_iter-num>
657 <Iteration_query-ID>Query_6</Iteration_query-ID>
658 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def>
659 <Iteration_query-len>1344</Iteration_query-len>
660 <Iteration_hits></Iteration_hits>
661 <Iteration_stat>
662 <Statistics>
663 <Statistics_db-num>0</Statistics_db-num>
664 <Statistics_db-len>0</Statistics_db-len>
665 <Statistics_hsp-len>31</Statistics_hsp-len>
666 <Statistics_eff-space>132189</Statistics_eff-space>
667 <Statistics_kappa>0.041</Statistics_kappa>
668 <Statistics_lambda>0.267</Statistics_lambda>
669 <Statistics_entropy>0.14</Statistics_entropy>
670 </Statistics>
671 </Iteration_stat>
672 <Iteration_message>No hits found</Iteration_message>
673 </Iteration>
674 <Iteration>
675 <Iteration_iter-num>24</Iteration_iter-num>
676 <Iteration_query-ID>Query_6</Iteration_query-ID>
677 <Iteration_query-def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Iteration_query-def>
678 <Iteration_query-len>1344</Iteration_query-len>
679 <Iteration_hits>
680 <Hit>
681 <Hit_num>1</Hit_num>
682 <Hit_id>Subject_4</Hit_id>
683 <Hit_def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Hit_def>
684 <Hit_accession>Subject_4</Hit_accession>
685 <Hit_len>348</Hit_len>
686 <Hit_hsps>
687 <Hsp>
688 <Hsp_num>1</Hsp_num>
689 <Hsp_bit-score>559.295621601033</Hsp_bit-score>
690 <Hsp_score>1440</Hsp_score>
691 <Hsp_evalue>6.32632556748138e-164</Hsp_evalue>
692 <Hsp_query-from>23</Hsp_query-from>
693 <Hsp_query-to>1018</Hsp_query-to>
694 <Hsp_hit-from>1</Hsp_hit-from>
695 <Hsp_hit-to>332</Hsp_hit-to>
696 <Hsp_query-frame>2</Hsp_query-frame>
697 <Hsp_hit-frame>0</Hsp_hit-frame>
698 <Hsp_identity>272</Hsp_identity>
699 <Hsp_positive>307</Hsp_positive>
700 <Hsp_gaps>0</Hsp_gaps>
701 <Hsp_align-len>332</Hsp_align-len>
702 <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKXXXXXXXXXXXXXXXXXXVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEED</Hsp_qseq>
703 <Hsp_hseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDE</Hsp_hseq>
704 <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +++</Hsp_midline>
705 </Hsp>
706 </Hit_hsps>
707 </Hit>
708 </Iteration_hits>
709 <Iteration_stat>
710 <Statistics>
711 <Statistics_db-num>0</Statistics_db-num>
712 <Statistics_db-len>0</Statistics_db-len>
713 <Statistics_hsp-len>31</Statistics_hsp-len>
714 <Statistics_eff-space>132189</Statistics_eff-space>
715 <Statistics_kappa>0.041</Statistics_kappa>
716 <Statistics_lambda>0.267</Statistics_lambda>
717 <Statistics_entropy>0.14</Statistics_entropy>
718 </Statistics>
719 </Iteration_stat>
720 </Iteration>
721 </BlastOutput_iterations>
722 </BlastOutput>