Mercurial > repos > devteam > package_vcftools_0_1_11

changeset 2:60266bea92bb draft

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Uploaded
author devteam
date Fri, 14 Feb 2014 14:51:42 -0500
parents 7d66b50885d1
children 710efaae2ff8
files tool_dependencies.xml
diffstat 1 files changed, 6 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Feb 14 12:45:06 2014 -0500
+++ b/tool_dependencies.xml	Fri Feb 14 14:51:42 2014 -0500
@@ -1,5 +1,8 @@
 <?xml version="1.0"?>
 <tool_dependency>
+    <set_environment version="1.0">
+        <environment_variable name="PERL5LIB" action="set_to">$REPOSITORY_INSTALL_DIR/perl</environment_variable>   
+    </set_environment>
     <package name="vcftools" version="0.1.11">
         <install version="1.0">
             <actions>
@@ -11,13 +14,13 @@
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/vcftools/bin</environment_variable>
                 </action>
+                <action type="set_environment">
+                    <environment_variable name="PERL5LIB" action="prepend_to">$INSTALL_DIR/vcftools/lib/perl5/site_perl</environment_variable>
+                </action>
             </actions>
         </install>
         <readme>
             A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project
         </readme>
     </package>
-    <set_environment version="1.0">
-        <environment_variable name="PERL5LIB" action="set_to">$REPOSITORY_INSTALL_DIR/perl</environment_variable>   
-    </set_environment>
 </tool_dependency>
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