Mercurial > repos > devteam > picard

annotate test-data/picard_CollectRnaSeqMetrics.gtf @ 22:f6ced08779c4 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
author iuc
date Fri, 29 Mar 2019 08:34:36 -0400
parents 00fe2ff64467
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
22
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
1 chrM insdc gene 577 647 . + . gene_id "ENSG00000210049"; gene_version "1"; gene_name "MT-TF"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
2 chrM insdc transcript 577 647 . + . gene_id "ENSG00000210049"; gene_version "1"; transcript_id "ENST00000387314"; transcript_version "1"; gene_name "MT-TF"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TF-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
3 chrM insdc exon 577 647 . + . gene_id "ENSG00000210049"; gene_version "1"; transcript_id "ENST00000387314"; transcript_version "1"; exon_number "1"; gene_name "MT-TF"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TF-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544501"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
4 chrM insdc gene 648 1601 . + . gene_id "ENSG00000211459"; gene_version "2"; gene_name "MT-RNR1"; gene_source "insdc"; gene_biotype "Mt_rRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
5 chrM insdc transcript 648 1601 . + . gene_id "ENSG00000211459"; gene_version "2"; transcript_id "ENST00000389680"; transcript_version "2"; gene_name "MT-RNR1"; gene_source "insdc"; gene_biotype "Mt_rRNA"; transcript_name "MT-RNR1-201"; transcript_source "insdc"; transcript_biotype "Mt_rRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
6 chrM insdc exon 648 1601 . + . gene_id "ENSG00000211459"; gene_version "2"; transcript_id "ENST00000389680"; transcript_version "2"; exon_number "1"; gene_name "MT-RNR1"; gene_source "insdc"; gene_biotype "Mt_rRNA"; transcript_name "MT-RNR1-201"; transcript_source "insdc"; transcript_biotype "Mt_rRNA"; exon_id "ENSE00001544499"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
7 chrM insdc gene 1602 1670 . + . gene_id "ENSG00000210077"; gene_version "1"; gene_name "MT-TV"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
8 chrM insdc transcript 1602 1670 . + . gene_id "ENSG00000210077"; gene_version "1"; transcript_id "ENST00000387342"; transcript_version "1"; gene_name "MT-TV"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TV-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
9 chrM insdc exon 1602 1670 . + . gene_id "ENSG00000210077"; gene_version "1"; transcript_id "ENST00000387342"; transcript_version "1"; exon_number "1"; gene_name "MT-TV"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TV-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544498"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
10 chrM insdc gene 1671 3229 . + . gene_id "ENSG00000210082"; gene_version "2"; gene_name "MT-RNR2"; gene_source "insdc"; gene_biotype "Mt_rRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
11 chrM insdc transcript 1671 3229 . + . gene_id "ENSG00000210082"; gene_version "2"; transcript_id "ENST00000387347"; transcript_version "2"; gene_name "MT-RNR2"; gene_source "insdc"; gene_biotype "Mt_rRNA"; transcript_name "MT-RNR2-201"; transcript_source "insdc"; transcript_biotype "Mt_rRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
12 chrM insdc exon 1671 3229 . + . gene_id "ENSG00000210082"; gene_version "2"; transcript_id "ENST00000387347"; transcript_version "2"; exon_number "1"; gene_name "MT-RNR2"; gene_source "insdc"; gene_biotype "Mt_rRNA"; transcript_name "MT-RNR2-201"; transcript_source "insdc"; transcript_biotype "Mt_rRNA"; exon_id "ENSE00001544497"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
13 chrM insdc gene 3230 3304 . + . gene_id "ENSG00000209082"; gene_version "1"; gene_name "MT-TL1"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
14 chrM insdc transcript 3230 3304 . + . gene_id "ENSG00000209082"; gene_version "1"; transcript_id "ENST00000386347"; transcript_version "1"; gene_name "MT-TL1"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TL1-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
15 chrM insdc exon 3230 3304 . + . gene_id "ENSG00000209082"; gene_version "1"; transcript_id "ENST00000386347"; transcript_version "1"; exon_number "1"; gene_name "MT-TL1"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TL1-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00002006242"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
16 chrM insdc gene 3307 4262 . + . gene_id "ENSG00000198888"; gene_version "2"; gene_name "MT-ND1"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
17 chrM insdc transcript 3307 4262 . + . gene_id "ENSG00000198888"; gene_version "2"; transcript_id "ENST00000361390"; transcript_version "2"; gene_name "MT-ND1"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND1-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
18 chrM insdc exon 3307 4262 . + . gene_id "ENSG00000198888"; gene_version "2"; transcript_id "ENST00000361390"; transcript_version "2"; exon_number "1"; gene_name "MT-ND1"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND1-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001435714"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
19 chrM insdc CDS 3307 4262 . + 0 gene_id "ENSG00000198888"; gene_version "2"; transcript_id "ENST00000361390"; transcript_version "2"; exon_number "1"; gene_name "MT-ND1"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND1-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000354687"; protein_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
20 chrM insdc start_codon 3307 3309 . + 0 gene_id "ENSG00000198888"; gene_version "2"; transcript_id "ENST00000361390"; transcript_version "2"; exon_number "1"; gene_name "MT-ND1"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND1-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
21 chrM insdc gene 4263 4331 . + . gene_id "ENSG00000210100"; gene_version "1"; gene_name "MT-TI"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
22 chrM insdc transcript 4263 4331 . + . gene_id "ENSG00000210100"; gene_version "1"; transcript_id "ENST00000387365"; transcript_version "1"; gene_name "MT-TI"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TI-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
23 chrM insdc exon 4263 4331 . + . gene_id "ENSG00000210100"; gene_version "1"; transcript_id "ENST00000387365"; transcript_version "1"; exon_number "1"; gene_name "MT-TI"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TI-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001993597"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
24 chrM insdc gene 4329 4400 . - . gene_id "ENSG00000210107"; gene_version "1"; gene_name "MT-TQ"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
25 chrM insdc transcript 4329 4400 . - . gene_id "ENSG00000210107"; gene_version "1"; transcript_id "ENST00000387372"; transcript_version "1"; gene_name "MT-TQ"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TQ-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
26 chrM insdc exon 4329 4400 . - . gene_id "ENSG00000210107"; gene_version "1"; transcript_id "ENST00000387372"; transcript_version "1"; exon_number "1"; gene_name "MT-TQ"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TQ-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544494"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
27 chrM insdc gene 4402 4469 . + . gene_id "ENSG00000210112"; gene_version "1"; gene_name "MT-TM"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
28 chrM insdc transcript 4402 4469 . + . gene_id "ENSG00000210112"; gene_version "1"; transcript_id "ENST00000387377"; transcript_version "1"; gene_name "MT-TM"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TM-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
29 chrM insdc exon 4402 4469 . + . gene_id "ENSG00000210112"; gene_version "1"; transcript_id "ENST00000387377"; transcript_version "1"; exon_number "1"; gene_name "MT-TM"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TM-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544493"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
30 chrM insdc gene 4470 5511 . + . gene_id "ENSG00000198763"; gene_version "3"; gene_name "MT-ND2"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
31 chrM insdc transcript 4470 5511 . + . gene_id "ENSG00000198763"; gene_version "3"; transcript_id "ENST00000361453"; transcript_version "3"; gene_name "MT-ND2"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND2-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
32 chrM insdc exon 4470 5511 . + . gene_id "ENSG00000198763"; gene_version "3"; transcript_id "ENST00000361453"; transcript_version "3"; exon_number "1"; gene_name "MT-ND2"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND2-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001435686"; exon_version "3"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
33 chrM insdc CDS 4470 5511 . + 0 gene_id "ENSG00000198763"; gene_version "3"; transcript_id "ENST00000361453"; transcript_version "3"; exon_number "1"; gene_name "MT-ND2"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND2-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000355046"; protein_version "4"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
34 chrM insdc start_codon 4470 4472 . + 0 gene_id "ENSG00000198763"; gene_version "3"; transcript_id "ENST00000361453"; transcript_version "3"; exon_number "1"; gene_name "MT-ND2"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND2-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
35 chrM insdc gene 5512 5579 . + . gene_id "ENSG00000210117"; gene_version "1"; gene_name "MT-TW"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
36 chrM insdc transcript 5512 5579 . + . gene_id "ENSG00000210117"; gene_version "1"; transcript_id "ENST00000387382"; transcript_version "1"; gene_name "MT-TW"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TW-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
37 chrM insdc exon 5512 5579 . + . gene_id "ENSG00000210117"; gene_version "1"; transcript_id "ENST00000387382"; transcript_version "1"; exon_number "1"; gene_name "MT-TW"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TW-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544492"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
38 chrM insdc gene 5587 5655 . - . gene_id "ENSG00000210127"; gene_version "1"; gene_name "MT-TA"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
39 chrM insdc transcript 5587 5655 . - . gene_id "ENSG00000210127"; gene_version "1"; transcript_id "ENST00000387392"; transcript_version "1"; gene_name "MT-TA"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TA-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
40 chrM insdc exon 5587 5655 . - . gene_id "ENSG00000210127"; gene_version "1"; transcript_id "ENST00000387392"; transcript_version "1"; exon_number "1"; gene_name "MT-TA"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TA-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544491"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
41 chrM insdc gene 5657 5729 . - . gene_id "ENSG00000210135"; gene_version "1"; gene_name "MT-TN"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
42 chrM insdc transcript 5657 5729 . - . gene_id "ENSG00000210135"; gene_version "1"; transcript_id "ENST00000387400"; transcript_version "1"; gene_name "MT-TN"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TN-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
43 chrM insdc exon 5657 5729 . - . gene_id "ENSG00000210135"; gene_version "1"; transcript_id "ENST00000387400"; transcript_version "1"; exon_number "1"; gene_name "MT-TN"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TN-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544490"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
44 chrM insdc gene 5761 5826 . - . gene_id "ENSG00000210140"; gene_version "1"; gene_name "MT-TC"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
45 chrM insdc transcript 5761 5826 . - . gene_id "ENSG00000210140"; gene_version "1"; transcript_id "ENST00000387405"; transcript_version "1"; gene_name "MT-TC"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TC-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
46 chrM insdc exon 5761 5826 . - . gene_id "ENSG00000210140"; gene_version "1"; transcript_id "ENST00000387405"; transcript_version "1"; exon_number "1"; gene_name "MT-TC"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TC-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544489"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
47 chrM insdc gene 5826 5891 . - . gene_id "ENSG00000210144"; gene_version "1"; gene_name "MT-TY"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
48 chrM insdc transcript 5826 5891 . - . gene_id "ENSG00000210144"; gene_version "1"; transcript_id "ENST00000387409"; transcript_version "1"; gene_name "MT-TY"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TY-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
49 chrM insdc exon 5826 5891 . - . gene_id "ENSG00000210144"; gene_version "1"; transcript_id "ENST00000387409"; transcript_version "1"; exon_number "1"; gene_name "MT-TY"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TY-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544488"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
50 chrM insdc gene 5904 7445 . + . gene_id "ENSG00000198804"; gene_version "2"; gene_name "MT-CO1"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
51 chrM insdc transcript 5904 7445 . + . gene_id "ENSG00000198804"; gene_version "2"; transcript_id "ENST00000361624"; transcript_version "2"; gene_name "MT-CO1"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO1-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
52 chrM insdc exon 5904 7445 . + . gene_id "ENSG00000198804"; gene_version "2"; transcript_id "ENST00000361624"; transcript_version "2"; exon_number "1"; gene_name "MT-CO1"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO1-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001435647"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
53 chrM insdc CDS 5904 7442 . + 0 gene_id "ENSG00000198804"; gene_version "2"; transcript_id "ENST00000361624"; transcript_version "2"; exon_number "1"; gene_name "MT-CO1"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO1-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000354499"; protein_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
54 chrM insdc start_codon 5904 5906 . + 0 gene_id "ENSG00000198804"; gene_version "2"; transcript_id "ENST00000361624"; transcript_version "2"; exon_number "1"; gene_name "MT-CO1"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO1-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
55 chrM insdc stop_codon 7443 7445 . + 0 gene_id "ENSG00000198804"; gene_version "2"; transcript_id "ENST00000361624"; transcript_version "2"; exon_number "1"; gene_name "MT-CO1"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO1-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
56 chrM insdc gene 7446 7514 . - . gene_id "ENSG00000210151"; gene_version "2"; gene_name "MT-TS1"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
57 chrM insdc transcript 7446 7514 . - . gene_id "ENSG00000210151"; gene_version "2"; transcript_id "ENST00000387416"; transcript_version "2"; gene_name "MT-TS1"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TS1-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
58 chrM insdc exon 7446 7514 . - . gene_id "ENSG00000210151"; gene_version "2"; transcript_id "ENST00000387416"; transcript_version "2"; exon_number "1"; gene_name "MT-TS1"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TS1-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544487"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
59 chrM insdc gene 7518 7585 . + . gene_id "ENSG00000210154"; gene_version "1"; gene_name "MT-TD"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
60 chrM insdc transcript 7518 7585 . + . gene_id "ENSG00000210154"; gene_version "1"; transcript_id "ENST00000387419"; transcript_version "1"; gene_name "MT-TD"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TD-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
61 chrM insdc exon 7518 7585 . + . gene_id "ENSG00000210154"; gene_version "1"; transcript_id "ENST00000387419"; transcript_version "1"; exon_number "1"; gene_name "MT-TD"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TD-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544486"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
62 chrM insdc gene 7586 8269 . + . gene_id "ENSG00000198712"; gene_version "1"; gene_name "MT-CO2"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
63 chrM insdc transcript 7586 8269 . + . gene_id "ENSG00000198712"; gene_version "1"; transcript_id "ENST00000361739"; transcript_version "1"; gene_name "MT-CO2"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO2-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
64 chrM insdc exon 7586 8269 . + . gene_id "ENSG00000198712"; gene_version "1"; transcript_id "ENST00000361739"; transcript_version "1"; exon_number "1"; gene_name "MT-CO2"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO2-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001435613"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
65 chrM insdc CDS 7586 8266 . + 0 gene_id "ENSG00000198712"; gene_version "1"; transcript_id "ENST00000361739"; transcript_version "1"; exon_number "1"; gene_name "MT-CO2"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO2-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000354876"; protein_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
66 chrM insdc start_codon 7586 7588 . + 0 gene_id "ENSG00000198712"; gene_version "1"; transcript_id "ENST00000361739"; transcript_version "1"; exon_number "1"; gene_name "MT-CO2"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO2-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
67 chrM insdc stop_codon 8267 8269 . + 0 gene_id "ENSG00000198712"; gene_version "1"; transcript_id "ENST00000361739"; transcript_version "1"; exon_number "1"; gene_name "MT-CO2"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO2-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
68 chrM insdc gene 8295 8364 . + . gene_id "ENSG00000210156"; gene_version "1"; gene_name "MT-TK"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
69 chrM insdc transcript 8295 8364 . + . gene_id "ENSG00000210156"; gene_version "1"; transcript_id "ENST00000387421"; transcript_version "1"; gene_name "MT-TK"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TK-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
70 chrM insdc exon 8295 8364 . + . gene_id "ENSG00000210156"; gene_version "1"; transcript_id "ENST00000387421"; transcript_version "1"; exon_number "1"; gene_name "MT-TK"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TK-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544484"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
71 chrM insdc gene 8366 8572 . + . gene_id "ENSG00000228253"; gene_version "1"; gene_name "MT-ATP8"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
72 chrM insdc transcript 8366 8572 . + . gene_id "ENSG00000228253"; gene_version "1"; transcript_id "ENST00000361851"; transcript_version "1"; gene_name "MT-ATP8"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ATP8-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
73 chrM insdc exon 8366 8572 . + . gene_id "ENSG00000228253"; gene_version "1"; transcript_id "ENST00000361851"; transcript_version "1"; exon_number "1"; gene_name "MT-ATP8"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ATP8-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001435286"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
74 chrM insdc CDS 8366 8569 . + 0 gene_id "ENSG00000228253"; gene_version "1"; transcript_id "ENST00000361851"; transcript_version "1"; exon_number "1"; gene_name "MT-ATP8"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ATP8-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000355265"; protein_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
75 chrM insdc start_codon 8366 8368 . + 0 gene_id "ENSG00000228253"; gene_version "1"; transcript_id "ENST00000361851"; transcript_version "1"; exon_number "1"; gene_name "MT-ATP8"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ATP8-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
76 chrM insdc stop_codon 8570 8572 . + 0 gene_id "ENSG00000228253"; gene_version "1"; transcript_id "ENST00000361851"; transcript_version "1"; exon_number "1"; gene_name "MT-ATP8"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ATP8-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
77 chrM insdc gene 8527 9207 . + . gene_id "ENSG00000198899"; gene_version "2"; gene_name "MT-ATP6"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
78 chrM insdc transcript 8527 9207 . + . gene_id "ENSG00000198899"; gene_version "2"; transcript_id "ENST00000361899"; transcript_version "2"; gene_name "MT-ATP6"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ATP6-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
79 chrM insdc exon 8527 9207 . + . gene_id "ENSG00000198899"; gene_version "2"; transcript_id "ENST00000361899"; transcript_version "2"; exon_number "1"; gene_name "MT-ATP6"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ATP6-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001727012"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
80 chrM insdc CDS 8527 9204 . + 0 gene_id "ENSG00000198899"; gene_version "2"; transcript_id "ENST00000361899"; transcript_version "2"; exon_number "1"; gene_name "MT-ATP6"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ATP6-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000354632"; protein_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
81 chrM insdc start_codon 8527 8529 . + 0 gene_id "ENSG00000198899"; gene_version "2"; transcript_id "ENST00000361899"; transcript_version "2"; exon_number "1"; gene_name "MT-ATP6"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ATP6-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
82 chrM insdc stop_codon 9205 9207 . + 0 gene_id "ENSG00000198899"; gene_version "2"; transcript_id "ENST00000361899"; transcript_version "2"; exon_number "1"; gene_name "MT-ATP6"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ATP6-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
83 chrM insdc gene 9207 9990 . + . gene_id "ENSG00000198938"; gene_version "2"; gene_name "MT-CO3"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
84 chrM insdc transcript 9207 9990 . + . gene_id "ENSG00000198938"; gene_version "2"; transcript_id "ENST00000362079"; transcript_version "2"; gene_name "MT-CO3"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO3-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
85 chrM insdc exon 9207 9990 . + . gene_id "ENSG00000198938"; gene_version "2"; transcript_id "ENST00000362079"; transcript_version "2"; exon_number "1"; gene_name "MT-CO3"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO3-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001608952"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
86 chrM insdc CDS 9207 9990 . + 0 gene_id "ENSG00000198938"; gene_version "2"; transcript_id "ENST00000362079"; transcript_version "2"; exon_number "1"; gene_name "MT-CO3"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO3-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000354982"; protein_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
87 chrM insdc start_codon 9207 9209 . + 0 gene_id "ENSG00000198938"; gene_version "2"; transcript_id "ENST00000362079"; transcript_version "2"; exon_number "1"; gene_name "MT-CO3"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CO3-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
88 chrM insdc gene 9991 10058 . + . gene_id "ENSG00000210164"; gene_version "1"; gene_name "MT-TG"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
89 chrM insdc transcript 9991 10058 . + . gene_id "ENSG00000210164"; gene_version "1"; transcript_id "ENST00000387429"; transcript_version "1"; gene_name "MT-TG"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TG-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
90 chrM insdc exon 9991 10058 . + . gene_id "ENSG00000210164"; gene_version "1"; transcript_id "ENST00000387429"; transcript_version "1"; exon_number "1"; gene_name "MT-TG"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TG-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544483"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
91 chrM insdc gene 10059 10404 . + . gene_id "ENSG00000198840"; gene_version "2"; gene_name "MT-ND3"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
92 chrM insdc transcript 10059 10404 . + . gene_id "ENSG00000198840"; gene_version "2"; transcript_id "ENST00000361227"; transcript_version "2"; gene_name "MT-ND3"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND3-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
93 chrM insdc exon 10059 10404 . + . gene_id "ENSG00000198840"; gene_version "2"; transcript_id "ENST00000361227"; transcript_version "2"; exon_number "1"; gene_name "MT-ND3"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND3-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001435444"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
94 chrM insdc CDS 10059 10404 . + 0 gene_id "ENSG00000198840"; gene_version "2"; transcript_id "ENST00000361227"; transcript_version "2"; exon_number "1"; gene_name "MT-ND3"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND3-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000355206"; protein_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
95 chrM insdc start_codon 10059 10061 . + 0 gene_id "ENSG00000198840"; gene_version "2"; transcript_id "ENST00000361227"; transcript_version "2"; exon_number "1"; gene_name "MT-ND3"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND3-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
96 chrM insdc gene 10405 10469 . + . gene_id "ENSG00000210174"; gene_version "1"; gene_name "MT-TR"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
97 chrM insdc transcript 10405 10469 . + . gene_id "ENSG00000210174"; gene_version "1"; transcript_id "ENST00000387439"; transcript_version "1"; gene_name "MT-TR"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TR-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
98 chrM insdc exon 10405 10469 . + . gene_id "ENSG00000210174"; gene_version "1"; transcript_id "ENST00000387439"; transcript_version "1"; exon_number "1"; gene_name "MT-TR"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TR-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544482"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
99 chrM insdc gene 10470 10766 . + . gene_id "ENSG00000212907"; gene_version "2"; gene_name "MT-ND4L"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
100 chrM insdc transcript 10470 10766 . + . gene_id "ENSG00000212907"; gene_version "2"; transcript_id "ENST00000361335"; transcript_version "1"; gene_name "MT-ND4L"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND4L-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
101 chrM insdc exon 10470 10766 . + . gene_id "ENSG00000212907"; gene_version "2"; transcript_id "ENST00000361335"; transcript_version "1"; exon_number "1"; gene_name "MT-ND4L"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND4L-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001596097"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
102 chrM insdc CDS 10470 10763 . + 0 gene_id "ENSG00000212907"; gene_version "2"; transcript_id "ENST00000361335"; transcript_version "1"; exon_number "1"; gene_name "MT-ND4L"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND4L-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000354728"; protein_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
103 chrM insdc start_codon 10470 10472 . + 0 gene_id "ENSG00000212907"; gene_version "2"; transcript_id "ENST00000361335"; transcript_version "1"; exon_number "1"; gene_name "MT-ND4L"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND4L-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
104 chrM insdc stop_codon 10764 10766 . + 0 gene_id "ENSG00000212907"; gene_version "2"; transcript_id "ENST00000361335"; transcript_version "1"; exon_number "1"; gene_name "MT-ND4L"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND4L-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
105 chrM insdc gene 10760 12137 . + . gene_id "ENSG00000198886"; gene_version "2"; gene_name "MT-ND4"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
106 chrM insdc transcript 10760 12137 . + . gene_id "ENSG00000198886"; gene_version "2"; transcript_id "ENST00000361381"; transcript_version "2"; gene_name "MT-ND4"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND4-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
107 chrM insdc exon 10760 12137 . + . gene_id "ENSG00000198886"; gene_version "2"; transcript_id "ENST00000361381"; transcript_version "2"; exon_number "1"; gene_name "MT-ND4"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND4-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001666004"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
108 chrM insdc CDS 10760 12137 . + 0 gene_id "ENSG00000198886"; gene_version "2"; transcript_id "ENST00000361381"; transcript_version "2"; exon_number "1"; gene_name "MT-ND4"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND4-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000354961"; protein_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
109 chrM insdc start_codon 10760 10762 . + 0 gene_id "ENSG00000198886"; gene_version "2"; transcript_id "ENST00000361381"; transcript_version "2"; exon_number "1"; gene_name "MT-ND4"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND4-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
110 chrM insdc gene 12138 12206 . + . gene_id "ENSG00000210176"; gene_version "1"; gene_name "MT-TH"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
111 chrM insdc transcript 12138 12206 . + . gene_id "ENSG00000210176"; gene_version "1"; transcript_id "ENST00000387441"; transcript_version "1"; gene_name "MT-TH"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TH-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
112 chrM insdc exon 12138 12206 . + . gene_id "ENSG00000210176"; gene_version "1"; transcript_id "ENST00000387441"; transcript_version "1"; exon_number "1"; gene_name "MT-TH"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TH-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544480"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
113 chrM insdc gene 12207 12265 . + . gene_id "ENSG00000210184"; gene_version "1"; gene_name "MT-TS2"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
114 chrM insdc transcript 12207 12265 . + . gene_id "ENSG00000210184"; gene_version "1"; transcript_id "ENST00000387449"; transcript_version "1"; gene_name "MT-TS2"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TS2-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
115 chrM insdc exon 12207 12265 . + . gene_id "ENSG00000210184"; gene_version "1"; transcript_id "ENST00000387449"; transcript_version "1"; exon_number "1"; gene_name "MT-TS2"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TS2-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544479"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
116 chrM insdc gene 12266 12336 . + . gene_id "ENSG00000210191"; gene_version "1"; gene_name "MT-TL2"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
117 chrM insdc transcript 12266 12336 . + . gene_id "ENSG00000210191"; gene_version "1"; transcript_id "ENST00000387456"; transcript_version "1"; gene_name "MT-TL2"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TL2-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
118 chrM insdc exon 12266 12336 . + . gene_id "ENSG00000210191"; gene_version "1"; transcript_id "ENST00000387456"; transcript_version "1"; exon_number "1"; gene_name "MT-TL2"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TL2-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544478"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
119 chrM insdc gene 12337 14148 . + . gene_id "ENSG00000198786"; gene_version "2"; gene_name "MT-ND5"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
120 chrM insdc transcript 12337 14148 . + . gene_id "ENSG00000198786"; gene_version "2"; transcript_id "ENST00000361567"; transcript_version "2"; gene_name "MT-ND5"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND5-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
121 chrM insdc exon 12337 14148 . + . gene_id "ENSG00000198786"; gene_version "2"; transcript_id "ENST00000361567"; transcript_version "2"; exon_number "1"; gene_name "MT-ND5"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND5-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001435330"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
122 chrM insdc CDS 12337 14145 . + 0 gene_id "ENSG00000198786"; gene_version "2"; transcript_id "ENST00000361567"; transcript_version "2"; exon_number "1"; gene_name "MT-ND5"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND5-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000354813"; protein_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
123 chrM insdc start_codon 12337 12339 . + 0 gene_id "ENSG00000198786"; gene_version "2"; transcript_id "ENST00000361567"; transcript_version "2"; exon_number "1"; gene_name "MT-ND5"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND5-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
124 chrM insdc stop_codon 14146 14148 . + 0 gene_id "ENSG00000198786"; gene_version "2"; transcript_id "ENST00000361567"; transcript_version "2"; exon_number "1"; gene_name "MT-ND5"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND5-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
125 chrM insdc gene 14149 14673 . - . gene_id "ENSG00000198695"; gene_version "2"; gene_name "MT-ND6"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
126 chrM insdc transcript 14149 14673 . - . gene_id "ENSG00000198695"; gene_version "2"; transcript_id "ENST00000361681"; transcript_version "2"; gene_name "MT-ND6"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND6-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
127 chrM insdc exon 14149 14673 . - . gene_id "ENSG00000198695"; gene_version "2"; transcript_id "ENST00000361681"; transcript_version "2"; exon_number "1"; gene_name "MT-ND6"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND6-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001434974"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
128 chrM insdc CDS 14152 14673 . - 0 gene_id "ENSG00000198695"; gene_version "2"; transcript_id "ENST00000361681"; transcript_version "2"; exon_number "1"; gene_name "MT-ND6"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND6-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000354665"; protein_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
129 chrM insdc start_codon 14671 14673 . - 0 gene_id "ENSG00000198695"; gene_version "2"; transcript_id "ENST00000361681"; transcript_version "2"; exon_number "1"; gene_name "MT-ND6"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND6-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
130 chrM insdc stop_codon 14149 14151 . - 0 gene_id "ENSG00000198695"; gene_version "2"; transcript_id "ENST00000361681"; transcript_version "2"; exon_number "1"; gene_name "MT-ND6"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-ND6-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
131 chrM insdc gene 14674 14742 . - . gene_id "ENSG00000210194"; gene_version "1"; gene_name "MT-TE"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
132 chrM insdc transcript 14674 14742 . - . gene_id "ENSG00000210194"; gene_version "1"; transcript_id "ENST00000387459"; transcript_version "1"; gene_name "MT-TE"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TE-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
133 chrM insdc exon 14674 14742 . - . gene_id "ENSG00000210194"; gene_version "1"; transcript_id "ENST00000387459"; transcript_version "1"; exon_number "1"; gene_name "MT-TE"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TE-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544476"; exon_version "1"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
134 chrM insdc gene 14747 15887 . + . gene_id "ENSG00000198727"; gene_version "2"; gene_name "MT-CYB"; gene_source "insdc"; gene_biotype "protein_coding";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
135 chrM insdc transcript 14747 15887 . + . gene_id "ENSG00000198727"; gene_version "2"; transcript_id "ENST00000361789"; transcript_version "2"; gene_name "MT-CYB"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CYB-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
136 chrM insdc exon 14747 15887 . + . gene_id "ENSG00000198727"; gene_version "2"; transcript_id "ENST00000361789"; transcript_version "2"; exon_number "1"; gene_name "MT-CYB"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CYB-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; exon_id "ENSE00001436074"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
137 chrM insdc CDS 14747 15887 . + 0 gene_id "ENSG00000198727"; gene_version "2"; transcript_id "ENST00000361789"; transcript_version "2"; exon_number "1"; gene_name "MT-CYB"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CYB-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; protein_id "ENSP00000354554"; protein_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
138 chrM insdc start_codon 14747 14749 . + 0 gene_id "ENSG00000198727"; gene_version "2"; transcript_id "ENST00000361789"; transcript_version "2"; exon_number "1"; gene_name "MT-CYB"; gene_source "insdc"; gene_biotype "protein_coding"; transcript_name "MT-CYB-201"; transcript_source "insdc"; transcript_biotype "protein_coding"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
139 chrM insdc gene 15888 15953 . + . gene_id "ENSG00000210195"; gene_version "2"; gene_name "MT-TT"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
140 chrM insdc transcript 15888 15953 . + . gene_id "ENSG00000210195"; gene_version "2"; transcript_id "ENST00000387460"; transcript_version "2"; gene_name "MT-TT"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TT-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
141 chrM insdc exon 15888 15953 . + . gene_id "ENSG00000210195"; gene_version "2"; transcript_id "ENST00000387460"; transcript_version "2"; exon_number "1"; gene_name "MT-TT"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TT-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544475"; exon_version "2"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
142 chrM insdc gene 15956 16023 . - . gene_id "ENSG00000210196"; gene_version "2"; gene_name "MT-TP"; gene_source "insdc"; gene_biotype "Mt_tRNA";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
143 chrM insdc transcript 15956 16023 . - . gene_id "ENSG00000210196"; gene_version "2"; transcript_id "ENST00000387461"; transcript_version "2"; gene_name "MT-TP"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TP-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; tag "basic";
f6ced08779c4 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit b6e11aa8e5fd1da27909207ec4f09cbbac467495
iuc
parents: 15
diff changeset
144 chrM insdc exon 15956 16023 . - . gene_id "ENSG00000210196"; gene_version "2"; transcript_id "ENST00000387461"; transcript_version "2"; exon_number "1"; gene_name "MT-TP"; gene_source "insdc"; gene_biotype "Mt_tRNA"; transcript_name "MT-TP-201"; transcript_source "insdc"; transcript_biotype "Mt_tRNA"; exon_id "ENSE00001544473"; exon_version "2"; tag "basic";