|
0
|
1 <tool id="Remove beginning1" name="Remove beginning">
|
|
|
2 <description>of a file</description>
|
|
|
3 <command interpreter="perl">remove_beginning.pl $input $num_lines $out_file1</command>
|
|
|
4 <inputs>
|
|
|
5 <param name="num_lines" size="5" type="integer" value="1" label="Remove first" help="lines"/>
|
|
|
6 <param format="txt" name="input" type="data" label="from"/>
|
|
|
7 </inputs>
|
|
|
8 <outputs>
|
|
|
9 <data format="input" name="out_file1" metadata_source="input"/>
|
|
|
10 </outputs>
|
|
|
11 <tests>
|
|
|
12 <test>
|
|
|
13 <param name="num_lines" value="5"/>
|
|
|
14 <param name="input" value="1.bed"/>
|
|
|
15 <output name="out_file1" file="eq-removebeginning.dat"/>
|
|
|
16 </test>
|
|
|
17 </tests>
|
|
|
18 <help>
|
|
|
19
|
|
|
20 **What it does**
|
|
|
21
|
|
|
22 This tool removes a specified number of lines from the beginning of a dataset.
|
|
|
23
|
|
|
24 -----
|
|
|
25
|
|
|
26 **Example**
|
|
|
27
|
|
|
28 Input File::
|
|
|
29
|
|
|
30 chr7 56632 56652 D17003_CTCF_R6 310 +
|
|
|
31 chr7 56736 56756 D17003_CTCF_R7 354 +
|
|
|
32 chr7 56761 56781 D17003_CTCF_R4 220 +
|
|
|
33 chr7 56772 56792 D17003_CTCF_R7 372 +
|
|
|
34 chr7 56775 56795 D17003_CTCF_R4 207 +
|
|
|
35
|
|
|
36 After removing the first 3 lines the dataset will look like this::
|
|
|
37
|
|
|
38 chr7 56772 56792 D17003_CTCF_R7 372 +
|
|
|
39 chr7 56775 56795 D17003_CTCF_R4 207 +
|
|
|
40
|
|
|
41 </help>
|
|
|
42 </tool>
|
