Mercurial > repos > devteam > tophat_fusion_post
annotate tool_dependencies.xml @ 10:33aafd74bb31
Fix bugs: (a) use value rather than dbkey to get bowtie indices and (b) point to correct bowtie table.
| author | devteam@galaxyproject.org |
|---|---|
| date | Thu, 27 Feb 2014 14:58:22 -0500 |
| parents | b5955d7050d7 |
| children | f83394a2c2da |
| rev | line source |
|---|---|
| 0 | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | |
| 3 <package name="blast+" version="2.2.28"> | |
|
10
33aafd74bb31
Fix bugs: (a) use value rather than dbkey to get bowtie indices and (b) point to correct bowtie table.
devteam@galaxyproject.org
parents:
8
diff
changeset
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4 <repository name="package_blast_plus_2_2_28" owner="iuc"/> |
| 0 | 5 </package> |
| 4 | 6 <package name="tophat2" version="2.0.9"> |
|
10
33aafd74bb31
Fix bugs: (a) use value rather than dbkey to get bowtie indices and (b) point to correct bowtie table.
devteam@galaxyproject.org
parents:
8
diff
changeset
|
7 <repository name="package_tophat2_2_0_9" owner="devteam"/> |
| 4 | 8 </package> |
|
3
2f75d0317ee5
Use Bowtie rather than Bowtie2 and update wrapper to fix Cheetah syntax bug.
devteam@galaxyproject.org
parents:
2
diff
changeset
|
9 <package name="bowtie" version="0.12.7"> |
|
10
33aafd74bb31
Fix bugs: (a) use value rather than dbkey to get bowtie indices and (b) point to correct bowtie table.
devteam@galaxyproject.org
parents:
8
diff
changeset
|
10 <repository name="package_bowtie_0_12_7" owner="devteam"/> |
|
1
75845643f9dd
Requirement fixes and fixed sample loc file."
devteam@galaxyproject.org
parents:
0
diff
changeset
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11 </package> |
| 0 | 12 </tool_dependency> |