Mercurial > repos > devteam > ucsc_custom_track

annotate build_ucsc_custom_track_code.py @ 2:3d87079756e1 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/main/tools/ucsc_custom_track commit 68ba77da2a1f8d6cd04dd7dc6efc5edcefcfa0c9"
author devteam
date Mon, 28 Feb 2022 20:06:04 +0000
parents 618e56c3109b
children
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618e56c3109b Imported from capsule None
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1 # runs after the job (and after the default post-filter)
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3d87079756e1 "planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/main/tools/ucsc_custom_track commit 68ba77da2a1f8d6cd04dd7dc6efc5edcefcfa0c9"
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3 def validate_input(trans, error_map, param_values, page_param_map):
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4 dbkeys = set()
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5 tracks = param_values['tracks']
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6 for track in tracks:
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7 if track['input']:
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3d87079756e1 "planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/main/tools/ucsc_custom_track commit 68ba77da2a1f8d6cd04dd7dc6efc5edcefcfa0c9"
devteam
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8 dbkeys.add(track['input'].dbkey)
3d87079756e1 "planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/main/tools/ucsc_custom_track commit 68ba77da2a1f8d6cd04dd7dc6efc5edcefcfa0c9"
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9 if len(dbkeys) > 1:
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10 # FIXME: Should be able to assume error map structure is created
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11 if 'tracks' not in error_map:
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3d87079756e1 "planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/main/tools/ucsc_custom_track commit 68ba77da2a1f8d6cd04dd7dc6efc5edcefcfa0c9"
devteam
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12 error_map['tracks'] = [dict() for t in tracks]
3d87079756e1 "planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/main/tools/ucsc_custom_track commit 68ba77da2a1f8d6cd04dd7dc6efc5edcefcfa0c9"
devteam
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13 for i in range(len(tracks)):
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14 error_map['tracks'][i]['input'] = \
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3d87079756e1 "planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/main/tools/ucsc_custom_track commit 68ba77da2a1f8d6cd04dd7dc6efc5edcefcfa0c9"
devteam
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15 "All datasets must belong to same genomic build"