Mercurial > repos > devteam > vcfaddinfo
diff vcfaddinfo.xml @ 1:196ed76d2619 draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfaddinfo commit 0b9b6512272b82637c2f1e831367e89aed77ae79
| author | devteam |
|---|---|
| date | Thu, 15 Sep 2016 16:06:46 -0400 |
| parents | 4d4b16af67aa |
| children | afc0ba768690 |
line wrap: on
line diff
--- a/vcfaddinfo.xml Thu Mar 19 12:21:38 2015 -0400 +++ b/vcfaddinfo.xml Thu Sep 15 16:06:46 2016 -0400 @@ -1,32 +1,32 @@ -<tool id="vcfaddinfo" name="VCFaddinfo:" version="0.0.3"> - <description>Adds info fields from the second dataset which are not present in the first dataset</description> - <macros> - <import>macros.xml</import> - </macros> - <expand macro="requirements"></expand> - <expand macro="stdio" /> - <command>vcfaddinfo "${input1}" "${input2}" > "${out_file1}"</command> - <inputs> - <param format="vcf" name="input1" type="data" label="Add INFO fields to" help="First VCF dataset"/> - <param format="vcf" name="input2" type="data" label="using INFO fields from" help="Second VCF dataset"/> - </inputs> - <outputs> - <data format="vcf" name="out_file1" /> - </outputs> - <tests> - <test> - <param name="input1" value="vcfaddinfo-input1.vcf"/> - <param name="input2" value="vcflib.vcf"/> - <output name="out_file1" file="vcfaddinfo-test1.vcf" /> - </test> - </tests> -<help> - -Adds info fields from the second dataset which are not present in the first dataset. - ------ - -Vcfaddinfo @IS_PART_OF_VCFLIB@ -</help> - <expand macro="citations" /> -</tool> +<tool id="vcfaddinfo" name="VCFaddinfo:" version="@WRAPPER_VERSION@.0"> + <description>Adds info fields from the second dataset which are not present in the first dataset</description> + <macros> + <import>macros.xml</import> + </macros> + <expand macro="requirements"></expand> + <expand macro="stdio" /> + <command>vcfaddinfo "${input1}" "${input2}" > "${out_file1}"</command> + <inputs> + <param format="vcf" name="input1" type="data" label="Add INFO fields to" help="First VCF dataset"/> + <param format="vcf" name="input2" type="data" label="using INFO fields from" help="Second VCF dataset"/> + </inputs> + <outputs> + <data format="vcf" name="out_file1" /> + </outputs> + <tests> + <test> + <param name="input1" value="vcfaddinfo-input1.vcf"/> + <param name="input2" value="vcflib.vcf"/> + <output name="out_file1" file="vcfaddinfo-test1.vcf" /> + </test> + </tests> +<help> + +Adds info fields from the second dataset which are not present in the first dataset. + +----- + +Vcfaddinfo @IS_PART_OF_VCFLIB@ +</help> + <expand macro="citations" /> +</tool>