Mercurial > repos > dfornika > data_manager_build_kraken2_database
annotate data_manager_conf.xml @ 19:ffeb852407d6 draft default tip
"planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 6f21145d4103d33c227f52dc55a7d3dcf52f4f5d-dirty"
author | dfornika |
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date | Wed, 23 Oct 2019 14:21:07 -0400 |
parents | f005b6efd096 |
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7e43f66abe9d
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit cc42cd530378bfa3df83b08b6b41aaf2f5072b49-dirty
dfornika
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1 <data_managers> |
19
ffeb852407d6
"planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 6f21145d4103d33c227f52dc55a7d3dcf52f4f5d-dirty"
dfornika
parents:
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2 <data_manager tool_file="data_manager/kraken2_build_database.xml" id="kraken2_build_database" version="2.0.8_beta_galaxy1"> |
18
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
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diff
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3 <data_table name="kraken2_databases"> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
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4 <output> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
changeset
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5 <column name="value"/> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
changeset
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6 <column name="name"/> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
changeset
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7 <column name="path" output_ref="out_file"> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
changeset
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8 <move type="directory"> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
changeset
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9 <source>${path}</source> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
changeset
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10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases/${path}</target> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
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11 </move> |
10
d0b9df6c21dd
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty
dfornika
parents:
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12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation> |
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f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
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13 <value_translation type="function">abspath</value_translation> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
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14 </column> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
changeset
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15 </output> |
f005b6efd096
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit a6877055190331683367394d1d1ca6ff47cf4fa7-dirty
dfornika
parents:
17
diff
changeset
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16 </data_table> |
0
7e43f66abe9d
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit cc42cd530378bfa3df83b08b6b41aaf2f5072b49-dirty
dfornika
parents:
diff
changeset
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17 </data_manager> |
7e43f66abe9d
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit cc42cd530378bfa3df83b08b6b41aaf2f5072b49-dirty
dfornika
parents:
diff
changeset
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18 </data_managers> |