Mercurial > repos > dfornika > data_manager_build_kraken2_database

changeset 10:d0b9df6c21dd draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty
author dfornika
date Mon, 04 Mar 2019 20:31:23 -0500
parents 1601703ae511
children 1dc93ae264e6
files data_manager_conf.xml
diffstat 1 files changed, 4 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager_conf.xml	Mon Mar 04 20:09:07 2019 -0500
+++ b/data_manager_conf.xml	Mon Mar 04 20:31:23 2019 -0500
@@ -9,7 +9,8 @@
 		        <source>${path}</source>
 			<target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases/${path}</target>
 		    </move>
-		    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation>
+		    <value_translation type="function">abspath</value_translation>
 		</column>
 	    </output>
 	</data_table>
@@ -25,6 +26,7 @@
 			<target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases/${path}</target>
 		    </move>
 		    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation>
+		    <value_translation type="function">abspath</value_translation>
 		</column>
 	    </output>
 	</data_table>
@@ -40,6 +42,7 @@
 			<target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases/${path}</target>
 		    </move>
 		    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation>
+		    <value_translation type="function">abspath</value_translation>
 		</column>
 	    </output>
 	</data_table>