Mercurial > repos > dfornika > kraken2

diff macros.xml @ 1:7932d09da19b draft

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planemo upload for repository https://github.com/dfornika/galaxytools/blob/master/tools/kraken2 commit 593a4002db3f2513974809a94db514c05fa589f6-dirty
author dfornika
date Mon, 04 Mar 2019 14:47:57 -0500
parents a77e88d426d9
children f8683d234222
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--- a/macros.xml	Fri Mar 01 12:43:26 2019 -0500
+++ b/macros.xml	Mon Mar 04 14:47:57 2019 -0500
@@ -10,6 +10,4 @@
             </options>
         </param>
     </xml>
-    <token name="@SET_DATABASE_PATH@">if [ -d '${kraken2_database.fields.path}/${kraken2_database.fields.name}' ]; then export KRAKEN2_DEFAULT_DB='${kraken2_database.fields.path}/${kraken2_database.fields.name}'; else export KRAKEN2_DEFAULT_DB='${kraken_database.fields.path}'; fi</token>
-    <token name="@INPUT_DATABASE@">--db "\$KRAKEN2_DEFAULT_DB"</token>
 </macros>