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comparison csaw.xml @ 1:63fdbd0a8fc3 draft

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author dktanwar
date Mon, 11 Dec 2017 10:03:46 -0500
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children ed929b85b051
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0:66356a1014b1 1:63fdbd0a8fc3
1 <tool id="CSAW" name="CSAW" version="0.1.0">
2 <command detect_errors="exit_code"><![CDATA[
3 Rscript $__tool_directory__/csaw.R $inputs $output
4 ]]></command>
5 <inputs>
6 <param type="data" name="inputs" format="bam" multiple="True" />
7 </inputs>
8 <outputs>
9 <data name="output" format="txt" />
10 </outputs>
11 <tests>
12 <test>
13 <param name="inputs" value="ENCFF027UTM.bam,ENCFF027UTM_1.bam"/>
14 <output name="output" file="csaw_results"/>
15 </test>
16 </tests>
17 <help><![CDATA[
18 Write the tool help section here.
19 ]]></help>
20 <citations>
21 <citation type="bibtex">
22 @misc{github01_mismatch_removal,
23 author = {LastTODO, FirstTODO},
24 year = {TODO},
25 title = {01_mismatch_removal},
26 publisher = {GitHub},
27 journal = {GitHub repository},
28 url = {https://github.com/dktanwar/Galaxy_Tools/tree/master/01_mismatch_removal},
29 }</citation>
30 </citations>
31 </tool>