Mercurial > repos > drosofff > yac_clipper
changeset 2:91cce7c1436d draft
planemo upload for repository https://bitbucket.org/drosofff/gedtools/ commit ce185c8eaa7a15cb400b3bd0cedb56efedb0e99f
author | drosofff |
---|---|
date | Thu, 03 Sep 2015 11:24:52 -0400 |
parents | 8a8f62b4bf27 |
children | a18edcf9c7ed |
files | README.txt yac.xml |
diffstat | 2 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/README.txt Wed Jun 24 17:06:30 2015 -0400 +++ b/README.txt Thu Sep 03 11:24:52 2015 -0400 @@ -8,4 +8,4 @@ Note that unclipped reads that satisfy the min and max size conditions are kept. Homepage: drosophile.org - +Repositoy development: https://bitbucket.org/drosofff/gedtools/
--- a/yac.xml Wed Jun 24 17:06:30 2015 -0400 +++ b/yac.xml Thu Sep 03 11:24:52 2015 -0400 @@ -1,4 +1,4 @@ -<tool id="yac" name="Clip adapter" version="1.3.5"> +<tool id="yac" name="Clip adapter" version="1.3.6"> <description /> <command interpreter="python">yac.py --input $input --output $output @@ -70,7 +70,7 @@ This tool clips adapter sequences from a fastq file and outputs either a fasta or fastq file of clipped reads with renumbered fasta/fastq headers. -By defualt clipped sequences with unknown nucleotides are kept, but +By default clipped sequences with unknown nucleotides are kept, but can be discarded by setting "Accept reads containing N?" to reject. Min size and max size filter clipped reads on their size.