Mercurial > repos > earlhaminst > ete
comparison ete_init_taxdb.xml @ 14:d40b9a7debe5 draft default tip
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 71b9c1035f713be174bfcf5ecb20804495f39258
author | earlhaminst |
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date | Thu, 07 Mar 2024 19:39:30 +0000 |
parents | 077021c45b96 |
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13:ed74587a13c8 | 14:d40b9a7debe5 |
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1 <tool id="ete_init_taxdb" name="ETE taxa DB generator" version="@VERSION@"> | 1 <tool id="ete_init_taxdb" name="ETE taxa DB generator" version="@VERSION@"> |
2 <description>generates the ETE sqlite DB from the NCBI taxdump.tar.gz</description> | 2 <description>generates the ETE sqlite DB from the NCBI taxdump.tar.gz</description> |
3 <macros> | 3 <macros> |
4 <import>ete_macros.xml</import> | 4 <import>ete_macros.xml</import> |
5 </macros> | 5 </macros> |
6 <expand macro="bio_tools"/> | |
6 <expand macro="requirements" /> | 7 <expand macro="requirements" /> |
7 <command detect_errors="exit_code"><![CDATA[ | 8 <command detect_errors="exit_code"><![CDATA[ |
8 python '$__tool_directory__/ete_init_taxdb.py' | 9 python '$__tool_directory__/ete_init_taxdb.py' |
9 #if $latestcond.latest == "local" | 10 #if $latestcond.latest == "local" |
10 -t '$latestcond.taxdump' | 11 -t '$latestcond.taxdump' |